Pregenerated sensors for LRRC8B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070639Ensembl transcript IDs: ENSMUST00000112707.3
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGTGGGTGAGGACAAAACAGTGTGCGGATGGACCAGTGCCACGTaGCTGCAGAGATGGAAGGATTTCCTGAAAAATGTAAGGAAACAG | + |
|
Preference number: 1 (lower is better) Translates to: EVGEDKTVCGWTSAT*LQRWKDFLKNVRKQ Trigger: CTGTTTCCTTACATTTTTCAGGAAATCCTTCCATCTCTGCAGTCACGTGGCACTGGTCCATCCGCACACTGTTTTGTCCTCACCCACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR TCA 90 bp | ACGCCAAACGTAAGCACTTTCCCAGGACTATCAGAGAAGCCTGGATaGGGATTCCAGCAAAATGAGAAAGGAGCAGAGAAGACAGCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: TPNVSTFPGLSEKPG*GFQQNEKGAEKTAK Trigger: CTTGGCTGTCTTCTCTGCTCCTTTCTCATTTTGCTGGAATCCTCATCCAGGCTTCTCTGATAGTCCTGGGAAAGTGCTTACGTTTGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CCA 90 bp | TCAGTTATTCACAAAACTCCGGTGTGGATATTTAACTGCTTGATTTaGACACTGGGTTATTTGGTAATATTTTTGGTTATGGCGTGTCAG | + |
|
Preference number: 1 (lower is better) Translates to: SVIHKTPVWIFNCLI*TLGYLVIFLVMACQ Trigger: CTGACACGCCATAACCAAAAATATTACCAAATAACCCAGTGTCCAAATCAAGCAGTTAAATATCCACACCGGAGTTTTGTGAATAACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR GCA 90 bp | ACAGCACACAGGTACACACCAGACACTATTACACACAGGACACTCTaGAGCAGTTGTTTGTTTACACTGTCTAAATATATATATATATAT | + |
|
Preference number: 1 (lower is better) Translates to: TAHRYTPDTITHRTL*SSCLFTLSKYIYIY Trigger: ATATATATATATATATTTAGACAGTGTAAACAAACAACTGCTGCAGAGTGTCCTGTGTGTAATAGTGTCTGGTGTGTACCTGTGTGCTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR GCA 90 bp | AATCATAATCAGCCCAAACTAAGAATCATTAAATTCTTACAGAGATaGACATGTTCACTGCTTACAAAAAGGTGTTCTCGTAGATGTAGC | + |
|
Preference number: 1 (lower is better) Translates to: NHNQPKLRIIKFLQR*TCSLLTKRCSRRCS Trigger: GCTACATCTACGAGAACACCTTTTTGTAAGCAGTGAACATGTGCATCTCTGTAAGAATTTAATGATTCTTAGTTTGGGCTGATTATGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGCCAGGGCCTGTCCATaGGGCCCCAGTGAGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: IFHSIMQYAVNENRDQKLARACP*GPSESQ Trigger: CTGGCTCTCACTGGGGCCTCATGGACAGGCCCTGGC...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCTCTAGGGAACTGCTTTaGGGAGGTAGACCAGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFSRELL*GGRPVS Trigger: GCTAACTGGTCTACCTCCTCAAAGCAGTTCCCTAGA...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGAACAGCCTTGTGTGTTaGAAGTGGCTCACACCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQNSLVC*KWLTPH Trigger: ATGAGGTGTGAGCCACTTTCAACACACAAGGCTGTT...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CCA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGTTGTACCCGTACTCTTaGACAACAGCAAGGAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQLYPYS*TTARRG Trigger: ACCTCTCCTTGCTGTTGTCCAAGAGTACGGGTACAA...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAAAATCAGAAAAGCCTaGCTAAGCCAGGGCCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFKIRKA*LSQGLS Trigger: GGACAGGCCCTGGCTTAGCCAGGCTTTTCTGATTTT...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCATCCATCTAGGGAACTaGTTTGAGGAGGTAGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFIHLGN*FEEVDQ Trigger: CTGGTCTACCTCCTCAAAGCAGTTCCCTAGATGGAT...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCGCTTGCCATTATCACTaGGAACCCAACAATTTCACG | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFACHYH*EPNNFT Trigger: CGTGAAATTGTTGGGTTCTCAGTGATAATGGCAAGC...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGACCACTTTAGCACACTaGAGCACACAAATTAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQTTLAH*STQIRA Trigger: AGCTCTAATTTGTGTGCTGCAGTGTGCTAAAGTGGT...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCTCACAAGGCAGCCTATaGGATAGATGTCAGTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFSQGSL*DRCQFH Trigger: ATGAAACTGACATCTATCTCATAGGCTGCCTTGTGA...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCGGTATATACGGCCACTaGGAGACATTTTCATCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFGIYGH*ETFSSF Trigger: GAAAGATGAAAATGTCTCTCAGTGGCCGTATATACC...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCACTATCAGAGAAGCCTaGATGAGGATTCCAGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFTIREA*MRIPAK Trigger: TTTTGCTGGAATCCTCATCCAGGCTTCTCTGATAGT...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCGGCTCAGTTAGATTCTaGATAGATGGCTTCTATCAT | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFGSVRF*IDGFYH Trigger: ATGATAGAAGCCATCTATTCAGAATCTAACTGAGCC...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCGTGTGGATATTTAACTaGTTGATTTGGACACTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: IAANSAQRDCDCTVSIRFVWIFN*LIWTLG Trigger: ACCCAGTGTCCAAATCAAGCAGTTAAATATCCACAC...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CCA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGGTATCAAGAGCAATATaGTTTCCACCAGTAACAACA | + |
|
Preference number: 2 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQVSRAI*FPPVTT Trigger: TGTTGTTACTGGTGGAAACCATATTGCTCTTGATAC...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 90 bp | ACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTaGTGTGTTGAAAGTGGCTCACACCTCATGATTGATCCATCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: TVVSRAIWFPPVTTA*CVESGSHLMIDPSR Trigger: CCTAGATGGATCAATCATGAGGTGTGAGCCACTTTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGATACAACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAAGTGGCAATCAAAGCCAGTGGTaGGCATACAACAAGGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: SRAIWFPPVTTALCVESGNQSQW*AYNKEI Trigger: AATCTCCTTGTTGTATGCTCACCACTGGCTTTGATT...GCCACTTTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR GCA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATATGAGGGGAAAACTCTaGCCTTGTGGGAACACATGG | + |
|
Preference number: 2 (lower is better) Translates to: NMRLMRTETRSWILINRDMRGKL*PCGNTW Trigger: CCATGTGTTCCCACAAGGGCAGAGTTTTCCCCTCAT...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR GCA 90 bp | TACAAGAGACACTATAAGACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTATTCCAATCTAGATCTTaGCCTCTCCCCTTGGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: YKRHYKTVVSRAIWFPPVFQSRS*PLPLVV Trigger: TACCACCAAGGGGAGAGGGCAAGATCTAGATTGGAA...TACTGGTGGAAACCATATTGCTCTTGATACAACAGTCTTATAGTGTCTCTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 90 bp | ATATTTAACTGCTTGATTTGGACACTGGGTTATTTGGTAATATTTTaGGTTATGGCGTGTCAGAGTCACCGGCCATCTCTCATCTTGATA | + |
|
Preference number: 2 (lower is better) Translates to: IFNCLIWTLGYLVIF*VMACQSHRPSLILI Trigger: TATCAAGATGAGAGATGGCCGGTGACTCTGACACGCCATAACCAAAAATATTACCAAATAACCCAGTGTCCAAATCAAGCAGTTAAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR GCA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATTATGAGAGAAAAACATaGTACAATGTCCACTTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: NMRLMRTETRSWILINRDYERKT*YNVHFP Trigger: GGGGAAGTGGACATTGTAGCATGTTTTTCTCTCATA...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 90 bp | ATGAGGAAACCCTCAAAGATGTTAGGGAGCAAAACACAAGGCTTTTaGTCATCCAAATTGGTTGCAGTAATTAGTTGCAAGAGTACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: MRKPSKMLGSKTQGF*SSKLVAVISCKSTK Trigger: TTTTGTACTCTTGCAACTAATTACTGCAACCAATTTGGATGACAAAAAGCCTTGTGTTTTGCTCCCTAACATCTTTGAGGGTTTCCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 90 bp | TCTCTGTCAGGTGGGAAATGTGTTGTCCATTGTCTTTGTGTTAGATaGAAAAGCTACCTCAACATTGATGCATCAGTGTTAAATACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLSGGKCVVHCLCVR*KSYLNIDASVLNTR Trigger: TCTTGTATTTAACACTGATGCATCAATGTTGAGGTAGCTTTTCAATCTAACACAAAGACAATGGACAACACATTTCCCACCTGACAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR TCA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATCGTAGATGTAGCATCTaGGATCATACAGTAGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: NMRLMRTETRSWILINRDRRCSI*DHTVEN Trigger: ATTTTCTACTGTATGATCTCAGATGCTACATCTACG...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR GCA 90 bp | TACAAGAGACACTATAAGACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTAGATGCACATGTTCACTaGTTACAAAAAGGTGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YKRHYKTVVSRAIWFPPVDAHVH*LQKGVL Trigger: GAGAACACCTTTTTGTAAGCAGTGAACATGTGCATC...TACTGGTGGAAACCATATTGCTCTTGATACAACAGTCTTATAGTGTCTCTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CCA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATTTTAACTGCTTGATTTaGACACTGGGTTATTTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: NMRLMRTETRSWILINRDFNCLI*TLGYLV Trigger: TACCAAATAACCCAGTGTCCAAATCAAGCAGTTAAA...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CCA 72 bp | ACTGCGACTGTACAGTGTCCATCAGATTCAGTGAGGTaGGTGAGGACAAAACAGTGTGCGGATGGACCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TATVQCPSDSVR*VRTKQCADGPV Trigger: CACTGGTCCATCCGCACACTGTTTTGTCCTCACCCACCTCACTGAATCTGATGGACACTGTACAGTCGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR GCA 72 bp | ACAGGGATGATCAAGCACAGGCATCGCTGCCAATTCTaGACAAAGAGACTGCGACTGTACAGTGTCCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: TGMIKHRHRCQF*TKRLRLYSVHQ Trigger: CTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGATGCCTGTGCTTGATCATCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR TCA 72 bp | AAGGGCCAAACACAAAGCTCTTTGTCAGGAGGAACATaGCGTATTCCAGGGGTCACAAGGCAGCCTATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KGQTQSSLSGGT*RIPGVTRQPMR Trigger: TCTCATAGGCTGCCTTGTGACCCCTGGAATACGTCATGTTCCTCCTGACAAAGAGCTTTGTGTTTGGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR TCA 72 bp | GAGGACAAAACAGTGTGCGGATGGACCAGTGCCACGTaGCTGCAGAGATGGAAGGATTTCCTGAAAAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: EDKTVCGWTSAT*LQRWKDFLKNV Trigger: TACATTTTTCAGGAAATCCTTCCATCTCTGCAGTCACGTGGCACTGGTCCATCCGCACACTGTTTTGTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CAA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGCAGGTGGGAAATGTGTaGTCCATTGTCTTTGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQQVGNV*SIVFVL Trigger: TAACACAAAGACAATGGACAACACATTTCCCACCTG...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR TCA 72 bp | GTAAGCACTTTCCCAGGACTATCAGAGAAGCCTGGATaGGGATTCCAGCAAAATGAGAAAGGAGCAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSTFPGLSEKPG*GFQQNEKGAEK Trigger: CTTCTCTGCTCCTTTCTCATTTTGCTGGAATCCTCATCCAGGCTTCTCTGATAGTCCTGGGAAAGTGCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR TCA 72 bp | CAACAGCCTTGTGTGTTGAAAGTGGCTCACACCTCATaGTTGATCCATCTAGGGAACTGCTTTGAGGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QQPCVLKVAHTS*LIHLGNCFEEV Trigger: TACCTCCTCAAAGCAGTTCCCTAGATGGATCAATCATGAGGTGTGAGCCACTTTCAACACACAAGGCTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CCA 72 bp | AGCAAAATGAGAAAGGAGCAGAGAAGACAGCCAAGATaGAATTCTGCCCAGCGTGATGCATGCTGCTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SKMRKEQRRQPR*NSAQRDACCSK Trigger: TTTTGAGCAGCATGCATCACGCTGGGCAGAATTCCATCTTGGCTGTCTTCTCTGCTCCTTTCTCATTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CAA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGTCTATCATAGTCATATaGAGAGATCATGCAGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQSIIVI*RDHADW Trigger: CCAATCTGCATGATCTCTCAATATGACTATGATAGA...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR TCA 72 bp | CACTGCAGCACACAAATTAGAGCTTGCCATTATCACTaGGAACCCAACAATTTCACGTACCCTGATTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: HCSTQIRACHYH*EPNNFTYPDST Trigger: GGTTGAATCAGGGTACGTGAAATTGTTGGGTTCTCAGTGATAATGGCAAGCTCTAATTTGTGTGCTGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCTGGATATTTAACTGCTaGATTTGGACACTGGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: IAANSAQRDCDCTVSIRFWIFNC*IWTLGY Trigger: ATAACCCAGTGTCCAAATCAAGCAGTTAAATATCCA...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCGCACGATTGATAGTATaGAAACCTCACTCACATTTA | + |
|
Preference number: 3 (lower is better) Translates to: IAANSAQRDCDCTVSIRFARLIV*KPHSHL Trigger: TAAATGTGAGTGAGGTTTCAATACTATCAATCGTGC...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CCA 72 bp | TGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTaGATTCTTATAAACAGGGATGATCAAGCACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CNMRLMRTETRS*ILINRDDQAQA Trigger: TGCCTGTGCTTGATCATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGGACCAGTGCCACGTGACTGCAGAGATGGAAGGATTTCCTGAAAAATGTAAGGACACTATAAGACTGTaGTATCAAGAGCAATATGGT | + |
|
Preference number: 3 (lower is better) Translates to: MDQCHVTAEMEGFPEKCKDTIRL*YQEQYG Trigger: ACCATATTGCTCTTGATACAACAGTCTTATAGTGTC...CTTACATTTTTCAGGAAATCCTTCCATCTCTGCAGTCACGTGGCACTGGTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTATCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAACAATTCCAGTCAACTTaGAAATTGGTCCACGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: VVSRAIWFPPVTTALCVEQFQST*KLVHVM Trigger: CATCACGTGGACCAATTTCAAAGTTGACTGGAATTG...TTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGATACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR TCA 72 bp | AGATGGAAGGATTTCCTGAAAAATGTAAGGAAACAGTaGCAACTCCACAGAGTAAGTGTTGGCCATTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RWKDFLKNVRKQ*QLHRVSVGHFH Trigger: ATGAAAATGGCCAACACTTACTCTGTGGAGTTGTCACTGTTTCCTTACATTTTTCAGGAAATCCTTCCATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR GCA 72 bp | AGGTACACACCAGACACTATTACACACAGGACACTCTaGAGCAGTTGTTTGTTTACACTGTCTAAATATATA | + |
|
Preference number: 3 (lower is better) Translates to: RYTPDTITHRTL*SSCLFTLSKYI Trigger: TATATATTTAGACAGTGTAAACAAACAACTGCTGCAGAGTGTCCTGTGTGTAATAGTGTCTGGTGTGTACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR-3UTR CAA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATAAAACACAAGGCTTTTaGTCATCCAAATTGGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NMRLMRTETRSWILINRDKTQGF*SSKLVA Trigger: TGCAACCAATTTGGATGACAAAAAGCCTTGTGTTTT...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR TCA 72 bp | GAGATAGATGTCAGTTTCATGGGCTCAGTTAGATTCTaGATAGATGGCTTCTATCATAGTCATATTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EIDVSFMGSVRF*IDGFYHSHIER Trigger: TCTCTCAATATGACTATGATAGAAGCCATCTATTCAGAATCTAACTGAGCCCATGAAACTGACATCTATCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR GCA 72 bp | TCAGTTATTCACAAAACTCCGGTGTGGATATTTAACTaGTTGATTTGGACACTGGGTTATTTGGTAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: SVIHKTPVWIFN*LIWTLGYLVIF Trigger: AAATATTACCAAATAACCCAGTGTCCAAATCAAGCAGTTAAATATCCACACCGGAGTTTTGTGAATAACTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGCAGGTGGGTGAGGTTTaGCAGCTCCCCCACCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQQVGEV*QLPHQR Trigger: CCTCTGGTGGGGGAGCTGTCAAACCTCACCCACCTG...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGTGGAAGCCCTCCAGGTaGAAGCTGCTCAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQWKPSR*KLLSCS Trigger: GGAGCAGCTGAGCAGCTTGCACCTGGAGGGCTTCCA...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | ATGGACCAGTGCCACGTGACTGCAGAGATGGAAGGATTTCCTGAAAAATGTAAGGTTCTGGATCCGGAGTaGCAGCGGGAGCAGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MDQCHVTAEMEGFPEKCKVLDPE*QREQQA Trigger: GGCCTGCTGCTCCCGCTGCCACTCCGGATCCAGAAC...CTTACATTTTTCAGGAAATCCTTCCATCTCTGCAGTCACGTGGCACTGGTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCGCTCCAGGTCGCAGCTaGGCAGCTCCAGGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IAANSAQRDCDCTVSIRFAPGRS*AAPGFS Trigger: TGAAAAGCCTGGAGCTGCTCAGCTGCGACCTGGAGC...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | TCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAAGTGGCCTGCTCTGGGTGAGCTaGAGGGCTCCGGCCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SRAIWFPPVTTALCVESGLLWVS*RAPAST Trigger: TGTGCTGGCCGGAGCCCTGCAGCTCACCCAGAGCAG...GCCACTTTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | ATGGACCAGTGCCACGTGACTGCAGAGATGGAAGGATTTCCTGAAAAATGTAAGCTTCAGGGGCCTCACTaGCTGTTCCGCCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MDQCHVTAEMEGFPEKCKLQGPH*LFRHCL Trigger: GAGACAGTGGCGGAACAGTCAGTGAGGCCCCTGAAG...CTTACATTTTTCAGGAAATCCTTCCATCTCTGCAGTCACGTGGCACTGGTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCCTGTGGGTAGGGCAATaGCTGCTTGCTGGCGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: IAANSAQRDCDCTVSIRFLWVGQ*LLAGVD Trigger: ATCGACGCCAGCAAGCAGTCATTGCCCTACCCACAG...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCTCAAGGGACAGCTTCTaGAGGGAGGGCAGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IAANSAQRDCDCTVSIRFSRDSF*REGSRS Trigger: AGACCTGCTGCCCTCCCTGCAGAAGCTGTCCCTTGA...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCGAGAGGCTCGGGAGGTaGTGGAAGCTGATGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IAANSAQRDCDCTVSIRFERLGR*WKLMIS Trigger: GGAGATCATCAGCTTCCAGCACCTCCCGAGCCTCTC...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCCTCCGTTTCAGAGACTaGCACCCTTCCAGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IAANSAQRDCDCTVSIRFLRFRD*HPSSST Trigger: TGTGGAGCTGGAAGGGTGTCAGTCTCTGAAACGGAG...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAAGTGGCTACAGGGGGTCGTACTaGTCGGCCAGGTGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRAIWFPPVTTALCVESGYRGSY*SARWRM Trigger: CATCCTCCACCTGGCCGACCAGTACGACCCCCTGTA...GCCACTTTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGTCTCCTCTACGGTCTTaGGGTTGTTCTCCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQSPLRS*GCSPSG Trigger: ACCTGAAGGAGAACAACCTCAAGACCGTAGAGGAGA...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGGTCACAGCAAAGTACTaGAGATTGGTCAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQVTAKY*RLVRYW Trigger: CCAGTACCTGACCAATCTGCAGTACTTTGCTGTGAC...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | ATGGACCAGTGCCACGTGACTGCAGAGATGGAAGGATTTCCTGAAAAATGTAAGGCAAGGTTTTGGACTTaGAGAGCTTCAGGGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MDQCHVTAEMEGFPEKCKARFWT*RASGAS Trigger: TGAGGCCCCTGAAGCTCTCCAAGTCCAAAACCTTGC...CTTACATTTTTCAGGAAATCCTTCCATCTCTGCAGTCACGTGGCACTGGTCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAAGTGGCCCAGTGAGTTCCAGGTaGGTGAGGTTTGACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAIWFPPVTTALCVESGPVSSR*VRFDSS Trigger: GGAGCTGTCAAACCTCACCCACCTGGAACTCACTGG...GCCACTTTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCCAAGAGTTATGTAGCTaGGAAAGTAGGGGACGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IAANSAQRDCDCTVSIRFQELCS*ESRGRR Trigger: CCTACGTCCCCTACTTTCTCAGCTACATAACTCTTG...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGGAAGCTAGGACCTTaGAGATTTCTGCCAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IAANSAQRDCDCTVSIRFRKLGP*RFLPRS Trigger: ACTCCTTGGCAGAAATCTTCAAGGTCCTAGCTTCCT...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | GTTGTATCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAGGATCCGCGACAGGCTaGTCTTCAAGTAGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVSRAIWFPPVTTALCVEGSATG*SSSRGS Trigger: GGACCCTCTACTTGAAGAGCAGCCTGTCGCGGATCC...TTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGATACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATGTTCCAGCCTCGAGCTaGTGCTGGGGTAGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NMRLMRTETRSWILINRDVPASS*CWGSEA Trigger: GGCTTCACTACCCCAGCACCAGCTCGAGGCTGGAAC...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | TCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAAGTGGCAGCTCGACCTTGTCCTaGGAGTTTTTCACGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAIWFPPVTTALCVESGSSTLS*EFFTSL Trigger: CAAGCTCGTGAAAAACTCGCAGGACAAGGTCGAGCT...GCCACTTTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | ATGGACCAGTGCCACGTGACTGCAGAGATGGAAGGATTTCCTGAAAAATGTAAGTTGAGAGCAAGGTTTTaGACTTGGAGAGCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MDQCHVTAEMEGFPEKCKLRARF*TWRASG Trigger: CCCTGAAGCTCTCCAAGTCCAAAACCTTGCTCTCAA...CTTACATTTTTCAGGAAATCCTTCCATCTCTGCAGTCACGTGGCACTGGTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | GTTGTATCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAAGGCTCGGGAGGTGCTaGAAGCTGATGATCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVSRAIWFPPVTTALCVERLGRC*KLMISS Trigger: AGAGGAGATCATCAGCTTCCAGCACCTCCCGAGCCT...TTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGATACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGTGCAGGCTGCGAAGATaGGGGTGTGCAGAAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IFHSIMQYAVNENRDQKLCRLRR*GCAEAP Trigger: TGGTGCTTCTGCACACCCTCATCTTCGCAGCCTGCA...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATGCCCGAGTTAGAAGATaGGTTCTCGCTGCCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NMRLMRTETRSWILINRDARVRR*VLAAFQ Trigger: CTGAAAGGCAGCGAGAACGCATCTTCTAACTCGGGC...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | GTTGTATCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAGCCTCAAAGGAGTACTaGTTCAAGGAACTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVSRAIWFPPVTTALCVEASKEY*FKELLS Trigger: GCTGAGGAGTTCCTTGAAGCAGTACTCCTTTGAGGC...TTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGATACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | GTTGTATCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAATTCAGGTCCAGCTCGTaGAGGTTGTTCAGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVSRAIWFPPVTTALCVEFRSSS*RLFRLK Trigger: TTTCAGCCTGAACAACCTGCACGAGCTGGACCTGAA...TTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGATACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAATGTGTTGTCCATTGTCTTTGTGTTAGATTGAAAAGCTACCTCAACATTGACGAATGGTACACGTaGAGCTCCCTGAGGTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GKCVVHCLCVRLKSYLNIDEWYT*SSLRLT Trigger: CGTCAACCTCAGGGAGCTCCACGTGTACCATTCGTC...AATGTTGAGGTAGCTTTTCAATCTAACACAAAGACAATGGACAACACATTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATTTGAGGTTCTTCAGGTaGAACACCCAGCGTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NMRLMRTETRSWILINRDLRFFR*NTQRGI Trigger: GATCCCACGCTGGGTGTTCCACCTGAAGAACCTCAA...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 72 bp | TGCTTGATTTGGACACTGGGTTATTTGGTAATATTTTaGGTTATGGCGTGTCAGAGTCACCGGCCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLIWTLGYLVIF*VMACQSHRPSL Trigger: GAGAGATGGCCGGTGACTCTGACACGCCATAACCAAAAATATTACCAAATAACCCAGTGTCCAAATCAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | TACAAGAGACACTATAAGACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTAAGGCAAAGTCGTTCTTaGCATCGGGGATGTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YKRHYKTVVSRAIWFPPVRQSRS*HRGCRC Trigger: ACAGCGACATCCCCGATGTCAAGAACGACTTTGCCT...TACTGGTGGAAACCATATTGCTCTTGATACAACAGTCTTATAGTGTCTCTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | TACAAGAGACACTATAAGACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTACAAGGCACAGCGCACTaGTTGTCAAATTCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKRHYKTVVSRAIWFPPVQGTAH*LSNSTL Trigger: CAAGGTGGAATTTGACAATCAGTGCGCTGTGCCTTG...TACTGGTGGAAACCATATTGCTCTTGATACAACAGTCTTATAGTGTCTCTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGCAGGACGCTAGAAGTTaGGCTTTCTATGCCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IFHSIMQYAVNENRDQKLQDARS*AFYARR Trigger: TCGCCTGGCATAGAAAGCCCAACTTCTAGCGTCCTG...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | GGGAAATGTGTTGTCCATTGTCTTTGTGTTAGATTGAAAAGCTACCTCAACATTGGATTTCCTCGGGAATaGAGGTCAGATGGTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKCVVHCLCVRLKSYLNIGFPRE*RSDGYS Trigger: GCTATAACCATCTGACCTTCATTCCCGAGGAAATCC...AATGTTGAGGTAGCTTTTCAATCTAACACAAAGACAATGGACAACACATTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGACACTGAAGCTTCTTaGATTGGAACAGCCCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFHSIMQYAVNENRDQKLDTEAS*IGTARL Trigger: CAGACGGGCTGTTCCAATGCAAGAAGCTTCAGTGTC...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGAGCACTTGTGGAGGATaGACACAAAGTGTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IFHSIMQYAVNENRDQKLSTCGG*TQSVPA Trigger: GGCTGGAACACTTTGTGTCCATCCTCCACAAGTGCT...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | TACAAGAGACACTATAAGACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTATTTCAAAGATGGCCTTaGCTTGTTCGCCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKRHYKTVVSRAIWFPPVFQRWP*LVRPPS Trigger: AGAAGGAGGGCGAACAAGCCAAGGCCATCTTTGAAA...TACTGGTGGAAACCATATTGCTCTTGATACAACAGTCTTATAGTGTCTCTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR TCA 90 bp | TACAAGAGACACTATAAGACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTACCAGGCTTTTCAGATTaGCCATCTTCTTCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YKRHYKTVVSRAIWFPPVPGFSD*PSSSGC Trigger: ACAACCTGAAGAAGATGGTCAATCTGAAAAGCCTGG...TACTGGTGGAAACCATATTGCTCTTGATACAACAGTCTTATAGTGTCTCTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGTGCATAGAAAAAGCTaGAGAGGGAGACTCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: IFHSIMQYAVNENRDQKLVHRKS*RGRLSM Trigger: CATCGAGAGTCTCCCTCTGCAGCTTTTTCTATGCAC...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 72 bp | CCCTCAAAGATGTTAGGGAGCAAAACACAAGGCTTTTaGTCATCCAAATTGGTTGCAGTAATTAGTTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSKMLGSKTQGF*SSKLVAVISCK Trigger: CTTGCAACTAATTACTGCAACCAATTTGGATGACAAAAAGCCTTGTGTTTTGCTCCCTAACATCTTTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGTGTCAAATTCCACCTTaGAGGGAAGACAGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IFHSIMQYAVNENRDQKLCQIPP*REDSRE Trigger: TTCTCTGCTGTCTTCCCTGCAAGGTGGAATTTGACA...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGTCACTTTTTCAAAGATaGCCTTGGCTTGTTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IFHSIMQYAVNENRDQKLSLFQR*PWLVRP Trigger: AGGGCGAACAAGCCAAGGCCATCTTTGAAAAAGTGA...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 72 bp | GGTGGGAAATGTGTTGTCCATTGTCTTTGTGTTAGATaGAAAAGCTACCTCAACATTGATGCATCAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GGKCVVHCLCVR*KSYLNIDASVL Trigger: TAACACTGATGCATCAATGTTGAGGTAGCTTTTCAATCTAACACAAAGACAATGGACAACACATTTCCCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAATGTGTTGTCCATTGTCTTTGTGTTAGATTGAAAAGCTACCTCAACATTCCAAGTAGTGTAGTTTaGTGCATAGAAAAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKCVVHCLCVRLKSYLNIPSSVV*CIEKAA Trigger: TGCAGCTTTTTCTATGCACCAAACTACACTACTTGG...AATGTTGAGGTAGCTTTTCAATCTAACACAAAGACAATGGACAACACATTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 72 bp | TGGATATTTAACTGCTTGATTTGGACACTGGGTTATTaGGTAATATTTTTGGTTATGGCGTGTCAGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WIFNCLIWTLGY*VIFLVMACQSH Trigger: GTGACTCTGACACGCCATAACCAAAAATATTACCAAATAACCCAGTGTCCAAATCAAGCAGTTAAATATCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGAGTAGTGTAGTTTGGTaGATAGAAAAAGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFHSIMQYAVNENRDQKLSSVVW*IEKAAE Trigger: CTCTGCAGCTTTTTCTATGCACCAAACTACACTACT...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| 3UTR CAA 72 bp | GTTATTCACAAAACTCCGGTGTGGATATTTAACTGCTaGATTTGGACACTGGGTTATTTGGTAATATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VIHKTPVWIFNC*IWTLGYLVIFL Trigger: CAAAAATATTACCAAATAACCCAGTGTCCAAATCAAGCAGTTAAATATCCACACCGGAGTTTTGTGAATAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS TCA 90 bp | ACCAGGGACGAATGGTACACGTGGAGCTCCCTGAGGTTGACGAGCTaGGCGACGGCAGCCGGCAGCTTGACTTCCGGGATCAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TRDEWYTWSSLRLTS*ATAAGSLTSGISSR Trigger: CCTGGAGCTGATCCCGGAAGTCAAGCTGCCGGCTGCCGTCGCTCAGCTCGTCAACCTCAGGGAGCTCCACGTGTACCATTCGTCCCTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS GCA 90 bp | AGGTTCTTCAAGTCCTGGAAGCCCTCCAGGTGCAAGCTGCTCAGCTaGTCCGGGAGAACGCAGCCCGACAGGTACAGCTCCTTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RFFKSWKPSRCKLLS*SGRTQPDRYSSLRF Trigger: GAACCTCAAGGAGCTGTACCTGTCGGGCTGCGTTCTCCCGGAGCAGCTGAGCAGCTTGCACCTGGAGGGCTTCCAGGACTTGAAGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS GCA 90 bp | GGGAGGGCAGCAGGTCTGTCACCACCTGAGGGATCCGCGACAGGCTaGTCTTCAAGTAGAGGGTCCTCAGGTTCTTCAAGTCCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRAAGLSPPEGSATG*SSSRGSSGSSSPGS Trigger: GCTTCCAGGACTTGAAGAACCTGAGGACCCTCTACTTGAAGAGCAGCCTGTCGCGGATCCCTCAGGTGGTGACAGACCTGCTGCCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CCA 90 bp | AGGCGGAGGATTCTTAAGTTCTCCTCTAGAAAGGCCAGGGCGGGGTaGTCGACCACCAGGGACGAATGGTACACGTGGAGCTCCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRILKFSSRKARAG*STTRDEWYTWSSLR Trigger: CCTCAGGGAGCTCCACGTGTACCATTCGTCCCTGGTGGTCGACCACCCCGCCCTGGCCTTTCTAGAGGAGAACTTAAGAATCCTCCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CCA 90 bp | GGGAGAACGCAGCCCGACAGGTACAGCTCCTTGAGGTTCTTCAGGTaGAACACCCAGCGTGGGATCTTCCCCATCTCGGTAAATTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTQPDRYSSLRFFR*NTQRGIFPISVNFR Trigger: CCTGAAATTTACCGAGATGGGGAAGATCCCACGCTGGGTGTTCCACCTGAAGAACCTCAAGGAGCTGTACCTGTCGGGCTGCGTTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS GCA 90 bp | TCCGGGAGACCGTTGAGCATGAAGAGATGCAGCTCGACCTTGTCCTaGGAGTTTTTCACGAGCTTGCTCTTCAGTCTCTCCACGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGRPLSMKRCSSTLS*EFFTSLLFSLSTVH Trigger: GTGGACCGTGGAGAGACTGAAGAGCAAGCTCGTGAAAAACTCGCAGGACAAGGTCGAGCTGCATCTCTTCATGCTCAACGGTCTCCCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCCGGAGCCCCCTGAGGTaGAGAGCAAGGTTTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: IAANSAQRDCDCTVSIRFRSPLR*RARFWT Trigger: AGTCCAAAACCTTGCTCTCAACCTCAGGGGGCTCCG...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | CGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCAGTCTACGGTCTTGAGGTaGTTCTCCTTCAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCQFCTKRLRLYSVHQIQSTVLR*FSFRSS Trigger: GCTGGACCTGAAGGAGAACAACCTCAAGACCGTAGA...CTGAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCTCCACGGTCCACTCGTaGTTGAGGTTGATCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IAANSAQRDCDCTVSIRFSTVHS*LRLICF Trigger: GAAACAGATCAACCTCAACAACGAGTGGACCGTGGA...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | GTTGTATCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAAGGAGAGTCGAAGCACTaGTGGAGGATGGACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVSRAIWFPPVTTALCVEGESKH*WRMDTK Trigger: CTTTGTGTCCATCCTCCACAAGTGCTTCGACTCTCC...TTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGATACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | ATGGACCAGTGCCACGTGACTGCAGAGATGGAAGGATTTCCTGAAAAATGTAAGACCATCTTCTTCAGGTaGTTCAGCACAACCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MDQCHVTAEMEGFPEKCKTIFFR*FSTTSL Trigger: CAAACTGGTTGTGCTGAACAACCTGAAGAAGATGGT...CTTACATTTTTCAGGAAATCCTTCCATCTCTGCAGTCACGTGGCACTGGTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | GTTGTATCAAGAGCAATATGGTTTCCACCAGTAACAACAGCCTTGTGTGTTGAATCCAGCTCGTGCAGGTaGTTCAGGCTGAAAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVSRAIWFPPVTTALCVESSSCR*FRLKME Trigger: CTCCATTTTCAGCCTGAACAACCTGCACGAGCTGGA...TTCAACACACAAGGCTGTTGTTACTGGTGGAAACCATATTGCTCTTGATACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATGGAAGCGGGAGGGAATaGAGCAAACTGTCCTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: NMRLMRTETRSWILINRDGSGRE*SKLSST Trigger: TGTCGAGGACAGTTTGCTCAATTCCCTCCCGCTTCC...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | TACAAGAGACACTATAAGACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTAAGCAAGGTTTTGGACTaGGAGAGCTTCAGGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YKRHYKTVVSRAIWFPPVSKVLD*ESFRGL Trigger: GAGGCCCCTGAAGCTCTCCAAGTCCAAAACCTTGCT...TACTGGTGGAAACCATATTGCTCTTGATACAACAGTCTTATAGTGTCTCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | ATCGCTGCCAATTCTGCACAAAGAGACTGCGACTGTACAGTGTCCATCAGATTCATCTCAATGTTATTGTaGGTCACAGCAAAGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: IAANSAQRDCDCTVSIRFISMLL*VTAKYC Trigger: GCAGTACTTTGCTGTGACCAACAATAACATTGAGAT...GAATCTGATGGACACTGTACAGTCGCAGTCTCTTTGTGCAGAATTGGCAGCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAATGTGTTGTCCATTGTCTTTGTGTTAGATTGAAAAGCTACCTCAACATTGACAGGTACAGCTCCTaGAGGTTCTTCAGGTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GKCVVHCLCVRLKSYLNIDRYSS*RFFRWN Trigger: GTTCCACCTGAAGAACCTCAAGGAGCTGTACCTGTC...AATGTTGAGGTAGCTTTTCAATCTAACACAAAGACAATGGACAACACATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAATGTGTTGTCCATTGTCTTTGTGTTAGATTGAAAAGCTACCTCAACATTTTTTCAAAGATGGCCTaGGCTTGTTCGCCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKCVVHCLCVRLKSYLNIFSKMA*ACSPSF Trigger: GAAGGAGGGCGAACAAGCCAAGGCCATCTTTGAAAA...AATGTTGAGGTAGCTTTTCAATCTAACACAAAGACAATGGACAACACATTTCCC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | AATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGATTCTTATAAACAGGGATAAGGAAGCTAGGACCTaGAAGATTTCTGCCAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NMRLMRTETRSWILINRDKEART*KISAKE Trigger: CTCCTTGGCAGAAATCTTCAAGGTCCTAGCTTCCTT...ATCCCTGTTTATAAGAATCCAGCTTCTGGTCTCTGTTCTCATTAACCGCATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | TACAAGAGACACTATAAGACTGTTGTATCAAGAGCAATATGGTTTCCACCAGTAGAGTTTTTCACGAGCTaGCTCTTCAGTCTCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: YKRHYKTVVSRAIWFPPVEFFTS*LFSLST Trigger: CGTGGAGAGACTGAAGAGCAAGCTCGTGAAAAACTC...TACTGGTGGAAACCATATTGCTCTTGATACAACAGTCTTATAGTGTCTCTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGGTTGAGAGCAAGGTTTaGGACTTGGAGAGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IFHSIMQYAVNENRDQKLVESKV*DLESFR Trigger: CCTGAAGCTCTCCAAGTCCAAAACCTTGCTCTCAAC...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAATGTGTTGTCCATTGTCTTTGTGTTAGATTGAAAAGCTACCTCAACATTTCCAGGCTTTTCAGATaGACCATCTTCTTCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKCVVHCLCVRLKSYLNISRLFR*TIFFRL Trigger: CAACCTGAAGAAGATGGTCAATCTGAAAAGCCTGGA...AATGTTGAGGTAGCTTTTCAATCTAACACAAAGACAATGGACAACACATTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCATTCTATAATGCAATATGCGGTTAATGAGAACAGAGACCAGAAGCTGAGCATCTCAATGTTATaGTTGGTCACAGCAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IFHSIMQYAVNENRDQKLSISML*LVTAKY Trigger: GTACTTTGCTGTGACCAACAATAACATTGAGATGCT...CAGCTTCTGGTCTCTGTTCTCATTAACCGCATATTGCATTATAGAATGAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS TCA 72 bp | GCCAGGCGACTCCAAGCCTGGCTGTGGGTAGGGCAATaGCTGCTTGCTGGCGTCGATGTCGGCGGAGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARRLQAWLWVGQ*LLAGVDVGGAP Trigger: GGGGGCTCCGCCGACATCGACGCCAGCAAGCAGTCATTGCCCTACCCACAGCCAGGCTTGGAGTCGCCTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS GCA 72 bp | AAGTCCTGGAAGCCCTCCAGGTGCAAGCTGCTCAGCTaGTCCGGGAGAACGCAGCCCGACAGGTACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KSWKPSRCKLLS*SGRTQPDRYSS Trigger: GGAGCTGTACCTGTCGGGCTGCGTTCTCCCGGAGCAGCTGAGCAGCTTGCACCTGGAGGGCTTCCAGGACTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS TCA 72 bp | GAATGGTACACGTGGAGCTCCCTGAGGTTGACGAGCTaGGCGACGGCAGCCGGCAGCTTGACTTCCGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: EWYTWSSLRLTS*ATAAGSLTSGI Trigger: GATCCCGGAAGTCAAGCTGCCGGCTGCCGTCGCTCAGCTCGTCAACCTCAGGGAGCTCCACGTGTACCATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CAA 72 bp | GCTTGCTGGCGTCGATGTCGGCGGAGCCCCCTGAGGTaGAGAGCAAGGTTTTGGACTTGGAGAGCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ACWRRCRRSPLR*RARFWTWRASG Trigger: CCCTGAAGCTCTCCAAGTCCAAAACCTTGCTCTCAACCTCAGGGGGCTCCGCCGACATCGACGCCAGCAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CCA 72 bp | CAGCCCGACAGGTACAGCTCCTTGAGGTTCTTCAGGTaGAACACCCAGCGTGGGATCTTCCCCATCTCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QPDRYSSLRFFR*NTQRGIFPISV Trigger: TACCGAGATGGGGAAGATCCCACGCTGGGTGTTCCACCTGAAGAACCTCAAGGAGCTGTACCTGTCGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CCA 72 bp | TGCCAGAGCTTCAGGCAGGAGAGGCTCGGGAGGTGCTaGAAGCTGATGATCTCCTCTACGGTCTTGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CQSFRQERLGRC*KLMISSTVLRL Trigger: CAACCTCAAGACCGTAGAGGAGATCATCAGCTTCCAGCACCTCCCGAGCCTCTCCTGCCTGAAGCTCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS GCA 72 bp | GCAGGTCTGTCACCACCTGAGGGATCCGCGACAGGCTaGTCTTCAAGTAGAGGGTCCTCAGGTTCTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGLSPPEGSATG*SSSRGSSGSSS Trigger: ACTTGAAGAACCTGAGGACCCTCTACTTGAAGAGCAGCCTGTCGCGGATCCCTCAGGTGGTGACAGACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CAA 72 bp | TGCAGCTCGACCTTGTCCTGCGAGTTTTTCACGAGCTaGCTCTTCAGTCTCTCCACGGTCCACTCGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSSTLSCEFFTS*LFSLSTVHSLL Trigger: CAACAACGAGTGGACCGTGGAGAGACTGAAGAGCAAGCTCGTGAAAAACTCGCAGGACAAGGTCGAGCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CAA 72 bp | ATCTCCGTCAGCTCAAAGACGTTATCCGGGAGACCGTaGAGCATGAAGAGATGCAGCTCGACCTTGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISVSSKTLSGRP*SMKRCSSTLSC Trigger: GCAGGACAAGGTCGAGCTGCATCTCTTCATGCTCAACGGTCTCCCGGATAACGTCTTTGAGCTGACGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CAA 90 bp | ACGTTATCCGGGAGACCGTTGAGCATGAAGAGATGCAGCTCGACCTaGTCCTGCGAGTTTTTCACGAGCTTGCTCTTCAGTCTCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: TLSGRPLSMKRCSST*SCEFFTSLLFSLST Trigger: CGTGGAGAGACTGAAGAGCAAGCTCGTGAAAAACTCGCAGGACAAGGTCGAGCTGCATCTCTTCATGCTCAACGGTCTCCCGGATAACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS GCA 72 bp | CCGTTGAGCATGAAGAGATGCAGCTCGACCTTGTCCTaGGAGTTTTTCACGAGCTTGCTCTTCAGTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLSMKRCSSTLS*EFFTSLLFSLS Trigger: GGAGAGACTGAAGAGCAAGCTCGTGAAAAACTCGCAGGACAAGGTCGAGCTGCATCTCTTCATGCTCAACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS CAA 72 bp | GGGAGACCGTTGAGCATGAAGAGATGCAGCTCGACCTaGTCCTGCGAGTTTTTCACGAGCTTGCTCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRPLSMKRCSST*SCEFFTSLLFS Trigger: ACTGAAGAGCAAGCTCGTGAAAAACTCGCAGGACAAGGTCGAGCTGCATCTCTTCATGCTCAACGGTCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||
| CDS TCA 72 bp | AAATCTGTTAGGCTATTTCTTCCCAGGAGTAGACACTaGAGCTTCTTGCATTGGAACAGCCCGTCTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: KSVRLFLPRSRH*SFLHWNSPSGS Trigger: GCTACCAGACGGGCTGTTCCAATGCAAGAAGCTTCAGTGTCTACTCCTGGGAAGAAATAGCCTAACAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112707.3 |
||