Pregenerated sensors for LRRC8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007476Ensembl transcript IDs: ENSMUST00000095078.3, ENSMUST00000113654.8
Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TGTCCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTaGTCTGGCTGGACCCAGCTGGCTGTCGCAGTCCTGGGAGAGCTG | + |
Preference number: 1 (lower is better) Translates to: CPSGRKGTSPSVPAF*SGWTQLAVAVLGEL Trigger: CAGCTCTCCCAGGACTGCGACAGCCAGCTGGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR TCA 90 bp | AGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTaGGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAAT | + |
Preference number: 1 (lower is better) Translates to: RSKLLFLGLWCWLGL*GRDGLQCEDPDCPN Trigger: ATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CCA 90 bp | CTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTaGAACCCTAAAACTGGGGAGCCTGCCCTCCCAGTGCTGACCTCT | + |
Preference number: 1 (lower is better) Translates to: LNCTVCKPGAQYKLS*NPKTGEPALPVLTS Trigger: AGAGGTCAGCACTGGGAGGGCAGGCTCCCCAGTTTTAGGGTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR GCA 90 bp | CCTGGCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTaGTTTGCTCAAGGGGGAAACACCACCCACCCTGAGACTGTAACT | + |
Preference number: 1 (lower is better) Translates to: PGPHPKDRKFCSMSC*FAQGGNTTHPETVT Trigger: AGTTACAGTCTCAGGGTGGGTGGTGTTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR GCA 90 bp | CATCCTGGCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTaGTGCTTTGCTCAAGGGGGAAACACCACCCACCCTGAGACTGTA | + |
Preference number: 1 (lower is better) Translates to: HPGPHPKDRKFCSMS*CFAQGGNTTHPETV Trigger: TACAGTCTCAGGGTGGGTGGTGTTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGCCAGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CCA 90 bp | CACGGCACTTCTGGACCACGGTCAGGACATATTGGGAAGACATCCTaGCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTG | + |
Preference number: 1 (lower is better) Translates to: HGTSGPRSGHIGKTS*PTPQRQEILFNVLL Trigger: CAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGCCAGGATGTCTTCCCAATATGTCCTGACCGTGGTCCAGAAGTGCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR GCA 90 bp | AGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTAGTGTaGAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACA | + |
Preference number: 1 (lower is better) Translates to: RPTCNGLLHGCQRLV*SISKGYIHDTTQKT Trigger: TGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR TCA 90 bp | TGGTTGTCAAAGGCTAGTGTGCAGTATTTCCAAGGGTTACATCCATaGCACGACGCAGAAAACACAAATGGACGGAGAGACAGACATAAT | + |
Preference number: 1 (lower is better) Translates to: WLSKASVQYFQGLHP*HDAENTNGRRDRHN Trigger: ATTATGTCTGTCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAGCCTTTGACAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | AAAACTGGGGAGCCTGCCCTCCCAGTGCTGACCTCTCATGCCCAATCTGCCTCTGGGAGGGGAAGCAGCTaGTCTGGGCTCCTTAACACT | + |
Preference number: 2 (lower is better) Translates to: KTGEPALPVLTSHAQSASGRGSS*SGLLNT Trigger: AGTGTTAAGGAGCCCAGAGCAGCTGCTTCCCCTCCC...AGAGGCAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAGGCTCCCCAGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR TCA 90 bp | AAAACTGGGGAGCCTGCCCTCCCAGTGCTGACCTCTCATGCCCAATCTGCCTCTTGTAAGCAGAAGAGGTaGGGGGTGGCACTGAGCAAA | + |
Preference number: 2 (lower is better) Translates to: KTGEPALPVLTSHAQSASCKQKR*GVALSK Trigger: TTTGCTCAGTGCCACCCCTCACCTCTTCTGCTTACA...AGAGGCAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAGGCTCCCCAGTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTTGGCTGTCGCAGTCCTaGGAGAGCTGGGCTGCCCAT | + |
Preference number: 2 (lower is better) Translates to: EAEMASSVKTLIVQILHSWLSQS*ESWAAH Trigger: ATGGGCAGCCCAGCTCTCCCAGGACTGCGACAGCCA...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCTGTGCGGAGGCTCGTTaGTGCTGCTCCAGGCTGTGC | + |
Preference number: 2 (lower is better) Translates to: ASSVKTLIVQILHSETSLCAEAR*CCSRLC Trigger: GCACAGCCTGGAGCAGCAGCAACGAGCCTCCGCACA...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTAGCAAGTGCCTGTCCTaGGTGTCCATGTCCCAGCGG | + |
Preference number: 2 (lower is better) Translates to: EAEMASSVKTLIVQILHSSKCLS*VSMSQR Trigger: CCGCTGGGACATGGACACCCAGGACAGGCACTTGCT...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR TCA 90 bp | CCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGGAAATGCTGGCTCGGCCTCTaGGGCAGAGATGGCCTCCAG | + |
Preference number: 2 (lower is better) Translates to: PQRQEILFNVLLLCSRGKCWLGL*GRDGLQ Trigger: CTGGAGGCCATCTCTGCCTCAGAGGCCGAGCCAGCA...TTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAATGGCTGTCGCAGTCCTaGGAGAGCTGGGCTGCCCAT | + |
Preference number: 2 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQWLSQS*ESWAAH Trigger: ATGGGCAGCCCAGCTCTCCCAGGACTGCGACAGCCA...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CAA 90 bp | CGGCTGGCTCACCCTACCCAACTCTGCCCAAGTCTGGGTGGGCACTaGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCC | + |
Preference number: 2 (lower is better) Translates to: RLAHPTQLCPSLGGH*ILSASPKKKKVNTA Trigger: GGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAAGTGCCCACCCAGACTTGGGCAGAGTTGGGTAGGGTGAGCCAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTATGTGCGGAGGCTCGTTaGTGCTGCTCCAGGCTGTGC | + |
Preference number: 2 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLCAEAR*CCSRLC Trigger: GCACAGCCTGGAGCAGCAGCAACGAGCCTCCGCACA...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR TCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTATGCTGGCTCGGCCTCTaGGGCAGAGATGGCCTCCAG | + |
Preference number: 2 (lower is better) Translates to: LILSASPKKKKVNTARVLCWLGL*GRDGLQ Trigger: CTGGAGGCCATCTCTGCCTCAGAGGCCGAGCCAGCA...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR TCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTACTGCCCTCCCAGTGCTaGCCTCTCATGCCCAATCTG | + |
Preference number: 2 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLLPSQC*PLMPNL Trigger: CAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAG...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTACAGCCCCTCAGTCCCTaGTTTCTGGTCTGGCTGGAC | + |
Preference number: 2 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLQPLSP*FLVWLD Trigger: GTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTG...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGCTTTCTGGTCTGGCTaGACCCAGCTGGCTGTCGCA | + |
Preference number: 2 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCAFWSG*TQLAVA Trigger: TGCGACAGCCAGCTGGGTCCAGCCAGACCAGAAAGC...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTAGCAAGTGCCTGTCCTaGGTGTCCATGTCCCAGCGG | + |
Preference number: 2 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCSKCLS*VSMSQR Trigger: CCGCTGGGACATGGACACCCAGGACAGGCACTTGCT...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGCTAAGTTACTGTTCCTaGGCCTCTGGTGCTGGCTCG | + |
Preference number: 2 (lower is better) Translates to: PTPQRQEILFNVLLLCSRLSYCS*ASGAGS Trigger: CGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAG...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGATTCCACAAGCTTTGCTaGCAGAGCCTAGCCCAGTGC | + |
Preference number: 2 (lower is better) Translates to: FPRVTSMTRRRKHKWTERFHKLC*QSLAQC Trigger: GCACTGGGCTAGGCTCTGGCAGCAAAGCTTGTGGAA...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACCCAGAGCCTTCCTTTTaGCTGACAGCCATGAAAAGG | + |
Preference number: 2 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNPEPSF*LTAMKR Trigger: CCTTTTCATGGCTGTCAGCCAAAAGGAAGGCTCTGG...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTATCAGTCCCTGCTTTCTaGTCTGGCTGGACCCAGCTG | + |
Preference number: 2 (lower is better) Translates to: LILSASPKKKKVNTARVLSVPAF*SGWTQL Trigger: CAGCTGGGTCCAGCCAGACCAGAAAGCAGGGACTGA...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GAACTGAGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAATTCCACCTGGAGGCCTaGTCTTCCACAAGCTTTGCT | + |
Preference number: 2 (lower is better) Translates to: ELSLQVRPTCNGLLHGCQFHLEA*SSTSFA Trigger: AGCAAAGCTTGTGGAAGACCAGGCCTCCAGGTGGAA...TTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACTCAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACGAAAAAGGTGAACACTaGCAGGGTGCTAAACACTTC | + |
Preference number: 2 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNEKGEH*QGAKHF Trigger: GAAGTGTTTAGCACCCTGGCAGTGTTCACCTTTTTC...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACTTCTGTTCAATGTCTTaGTGCTTTGCTCAAGGGGGA | + |
Preference number: 2 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNFCSMS*CFAQGG Trigger: TCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAA...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTGCTTTCTGGTCTGGCTaGACCCAGCTGGCTGTCGCA | + |
Preference number: 2 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIAFWSG*TQLAVA Trigger: TGCGACAGCCAGCTGGGTCCAGCCAGACCAGAAAGC...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGACCAGAGCCTTCCTTTTaGCTGACAGCCATGAAAAGG | + |
Preference number: 2 (lower is better) Translates to: FPRVTSMTRRRKHKWTERPEPSF*LTAMKR Trigger: CCTTTTCATGGCTGTCAGCCAAAAGGAAGGCTCTGG...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTAGGAGCACCGTTCATCTaGGAATTAGCCAGCCTAAGT | + |
Preference number: 2 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLGAPFI*ELASLS Trigger: ACTTAGGCTGGCTAATTCCCAGATGAACGGTGCTCC...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTCCTGACCCTTCCACCTaGAGGCCTGGTCTTCCACAA | + |
Preference number: 2 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIPDPST*RPGLPQ Trigger: TTGTGGAAGACCAGGCCTCCAGGTGGAAGGGTCAGG...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGACAGTACAAACTGTCCTaGAACCCTAAAACTGGGGAG | + |
Preference number: 2 (lower is better) Translates to: FPRVTSMTRRRKHKWTERQYKLS*NPKTGE Trigger: CTCCCCAGTTTTAGGGTTCCAGGACAGTTTGTACTG...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGAACAAAAATAAAAGCCTaGCCCAGGAGAGAAGAGCAC | + |
Preference number: 2 (lower is better) Translates to: FPRVTSMTRRRKHKWTERTKIKA*PRREEH Trigger: GTGCTCTTCTCTCCTGGGGCAGGCTTTTATTTTTGT...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAACAGTACAAACTGTCCTaGAACCCTAAAACTGGGGAG | + |
Preference number: 2 (lower is better) Translates to: LVCSISKGYIHDTTQKTQQYKLS*NPKTGE Trigger: CTCCCCAGTTTTAGGGTTCCAGGACAGTTTGTACTG...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CAA 90 bp | TTGATATCTGAACTGAGTCTACAAGTCAGACCCACGTGTAACGGATaGCTTCATGGTTGTCAAAGGCTAGTGTGCAGTATTTCCAAGGGT | + |
Preference number: 2 (lower is better) Translates to: LISELSLQVRPTCNG*LHGCQRLVCSISKG Trigger: ACCCTTGGAAATACTGCACACTAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACTCAGTTCAGATATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR GCA 90 bp | GAACTGAGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGAGACGCTAAAACGTaGCTTAGTGTCCATGTGATT | + |
Preference number: 2 (lower is better) Translates to: ELSLQVRPTCNGLLHGCQRDAKT*LSVHVI Trigger: AATCACATGGACACTAAGGCACGTTTTAGCGTCTCT...TTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACTCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTAGAGCACGGCACTTCTaGACCACGGTCAGGACATAT | + |
Preference number: 2 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIRARHF*TTVRTY Trigger: ATATGTCCTGACCGTGGTCCAGAAGTGCCGTGCTCT...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CAA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCGTGTGCGGAGGCTCGTaGCTGCTGCTCCAGGCTGTG | + |
Preference number: 3 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPVCGGS*LLLQAV Trigger: CACAGCCTGGAGCAGCAGCAACGAGCCTCCGCACAC...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR GCA 72 bp | TCCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTaGTTTCTGGTCTGGCTGGACCCAGCTGGCTGTCGC | + |
Preference number: 3 (lower is better) Translates to: SQREERDQPLSP*FLVWLDPAGCR Trigger: GCGACAGCCAGCTGGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CAA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCGTGTGCGGAGGCTCGTaGCTGCTGCTCCAGGCTGTG | + |
Preference number: 3 (lower is better) Translates to: PASACPGCPCPSGRKGTSVCGGS*LLLQAV Trigger: CACAGCCTGGAGCAGCAGCAACGAGCCTCCGCACAC...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CCA 72 bp | CCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCAGCTaGCTGTCGCAGTCCTGGGAGAGCTGGGCTGCCCAT | + |
Preference number: 3 (lower is better) Translates to: PQSLLSGLAGPS*LSQSWESWAAH Trigger: ATGGGCAGCCCAGCTCTCCCAGGACTGCGACAGCCAGCTGGGTCCAGCCAGACCAGAAAGCAGGGACTGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CCA 72 bp | GGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTaGTCTGGCTGGACCCAGCTGGCTGTCGCAGTCCTG | + |
Preference number: 3 (lower is better) Translates to: GRKGTSPSVPAF*SGWTQLAVAVL Trigger: CAGGACTGCGACAGCCAGCTGGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR TCA 72 bp | TTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTaGGGCAGAGATGGCCTCCAGTGTGAAGACCCTGAT | + |
Preference number: 3 (lower is better) Translates to: LLFLGLWCWLGL*GRDGLQCEDPD Trigger: ATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR CCA 72 bp | CCTAGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTaGCTCACCCTACCCAACTCTGCCCAAGTCTGGGTG | + |
Preference number: 3 (lower is better) Translates to: PSPVPIRQLSYG*LTLPNSAQVWV Trigger: CACCCAGACTTGGGCAGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR GCA 72 bp | CTGAGACTAGTCTCAGAGGTTCTGGTCTCCAGCAAGTaGCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAA | + |
Preference number: 3 (lower is better) Translates to: LRLVSEVLVSSK*LSWVSMSQREE Trigger: TTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAACCTCTGAGACTAGTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR GCA 72 bp | GCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTaGCCAAGTCTGGGTGGGCACTTGATTCTGTCAGCA | + |
Preference number: 3 (lower is better) Translates to: ATVLRLAHPTQL*PSLGGHLILSA Trigger: TGCTGACAGAATCAAGTGCCCACCCAGACTTGGGCAGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR CCA 72 bp | ACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTaGAACCCTAAAACTGGGGAGCCTGCCCTCCCAGTG | + |
Preference number: 3 (lower is better) Translates to: TVCKPGAQYKLS*NPKTGEPALPV Trigger: CACTGGGAGGGCAGGCTCCCCAGTTTTAGGGTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR CCA 72 bp | AAAAGCCTGCCCCAGGAGAGAAGAGCACGGCACTTCTaGACCACGGTCAGGACATATTGGGAAGACATCCTG | + |
Preference number: 3 (lower is better) Translates to: KSLPQERRARHF*TTVRTYWEDIL Trigger: CAGGATGTCTTCCCAATATGTCCTGACCGTGGTCCAGAAGTGCCGTGCTCTTCTCTCCTGGGGCAGGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR TCA 72 bp | AAGGCGAGGACCCTTCTAAGTGGGGACCCTAGTGATTaGTCTAAAGCAGAGTGGCTTACCGCCACTAGACGC | + |
Preference number: 3 (lower is better) Translates to: KARTLLSGDPSD*SKAEWLTATRR Trigger: GCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCACTAGGGTCCCCACTTAGAAGGGTCCTCGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR GCA 72 bp | CCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTaGTGCTTTGCTCAAGGGGGAAACACCACCCACCCT | + |
Preference number: 3 (lower is better) Translates to: PHPKDRKFCSMS*CFAQGGNTTHP Trigger: AGGGTGGGTGGTGTTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR-3UTR CAA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGATCCAGAGCCTTCCTTTaGGCTGACAGCCATGAAAAG | + |
Preference number: 3 (lower is better) Translates to: FPRVTSMTRRRKHKWTERSRAFL*ADSHEK Trigger: CTTTTCATGGCTGTCAGCCAAAAGGAAGGCTCTGGA...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR TCA 72 bp | AAGGCTAGTGTGCAGTATTTCCAAGGGTTACATCCATaGCACGACGCAGAAAACACAAATGGACGGAGAGAC | + |
Preference number: 3 (lower is better) Translates to: KASVQYFQGLHP*HDAENTNGRRD Trigger: GTCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR GCA 72 bp | TGTAACGGATTGCTTCATGGTTGTCAAAGGCTAGTGTaGAGTATTTCCAAGGGTTACATCCATGACACGACG | + |
Preference number: 3 (lower is better) Translates to: CNGLLHGCQRLV*SISKGYIHDTT Trigger: CGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAGCCTTTGACAACCATGAAGCAATCCGTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
3UTR GCA 72 bp | ACAGACATAATCATTAAGACAAGAGACGCTAAAACGTaGCTTAGTGTCCATGTGATTGATCTAAGGCGAGGA | + |
Preference number: 3 (lower is better) Translates to: TDIIIKTRDAKT*LSVHVIDLRRG Trigger: TCCTCGCCTTAGATCAATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGCCAGGCCGCTGCGCTTaGGTAGGGGGCACTCTCCCA | + |
Preference number: 4 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWPGRCA*VGGTLP Trigger: TGGGAGAGTGCCCCCTACTCAAGCGCAGCGGCCTGG...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCCCAGGCCGCTGCGCTTaGGTAGGGGGCACTCTCCCA | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPPGRCA*VGGTLP Trigger: TGGGAGAGTGCCCCCTACTCAAGCGCAGCGGCCTGG...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCGCACGCCCACATCCGTaGCCACCTGCGGCAGCTTGC | + |
Preference number: 4 (lower is better) Translates to: PASACPGCPCPSGRKGTSARPHP*PPAAAC Trigger: GCAAGCTGCCGCAGGTGGTCACGGATGTGGGCGTGC...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCCCGACAGGGCCCGTGTaGTCCACGGTGAGTCGAAGC | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPPTGPV*STVSRS Trigger: GCTTCGACTCACCGTGGACCACACGGGCCCTGTCGG...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGTTGAGGCCTGTGAGCTaGGCGATGCTGGGCGGGATG | + |
Preference number: 4 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWLRPVS*AMLGGM Trigger: CATCCCGCCCAGCATCGCCCAGCTCACAGGCCTCAA...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCAGGCAGGTGAGGCGGTaGAGGTGCTGGAAGCTGATG | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPRQVRR*RCWKLM Trigger: CATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCT...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR CCA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGCGATCTGCGTCAGGTTaGTCAGCTCGCCCACTCTCG | + |
Preference number: 4 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWRSASG*SARPLS Trigger: CGAGAGTGGGCGAGCTGACCAACCTGACGCAGATCG...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCGCGTCCACTCGTTGTTaGGGTTCAGCTGGCGCAGCT | + |
Preference number: 4 (lower is better) Translates to: PASACPGCPCPSGRKGTSASTRC*GSAGAA Trigger: AGCTGCGCCAGCTGAACCTCAACAACGAGTGGACGC...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCCCCGCAGCCCGTCAATaGCGATGTAGCGGTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPPAARQ*RCSGCS Trigger: AGAACAACCGCTACATCGTCATTGACGGGCTGCGGG...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAACTCTGGGCTGGAGGCTaGCCAGCCCCGGAAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: FWSPASACPGCPCPSGRKLWAGG*PAPEGV Trigger: GACTCCTTCCGGGGCTGGGCAGCCTCCAGCCCAGAG...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCGCGTCGGCAGGACTGTaGAGTTGGGGTAAGTGGGCT | + |
Preference number: 4 (lower is better) Translates to: PASACPGCPCPSGRKGTSASAGL*SWGKWA Trigger: AGCCCACTTACCCCAACTCCACAGTCCTGCCGACGC...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCCAGGTGGCAGTGTGCTaGACAAGTCCTCTTCCACCA | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPQVAVC*TSPLPP Trigger: TGGTGGAAGAGGACTTGTTCAGCACACTGCCACCTG...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | AAAACTGGGGAGCCTGCCCTCCCAGTGCTGACCTCTCATGCCCAATCTGCCTCTCGTGACTTGGTCCGCTaGAGCATGGGCACGGTGGCC | + |
Preference number: 4 (lower is better) Translates to: KTGEPALPVLTSHAQSASRDLVR*SMGTVA Trigger: GGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACG...AGAGGCAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAGGCTCCCCAGTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCTCCGTGAACTTGATGTaGAGGGCCCGCAGGTTCTCC | + |
Preference number: 4 (lower is better) Translates to: PASACPGCPCPSGRKGTSSVNLM*RARRFS Trigger: GGAGAACCTGCGGGCCCTGCACATCAAGTTCACGGA...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCGTAGCGGTTGTTCTCTaGACTCAGGTTGCCCGTCAG | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPVAVVL*TQVARQ Trigger: CTGACGGGCAACCTGAGTGCAGAGAACAACCGCTAC...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCACATCCGTGACCACCTaGGGCAGCTTGCTCAGGTTG | + |
Preference number: 4 (lower is better) Translates to: PASACPGCPCPSGRKGTSTSVTT*GSLLRL Trigger: CAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGT...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGCATCTTGCTGAAGGCTaGCTTGGGGTCACTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWHLAEG*LGVTLL Trigger: GAGGAGAGTGACCCCAAGCCAGCCTTCAGCAAGATG...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGCACAGCGGTAGGTaGGGTAGCCTGTCAGGCTCT | + |
Preference number: 4 (lower is better) Translates to: FWSPASACPGCPCPSGRKGHSGR*GSLSGS Trigger: AGAGCCTGACAGGCTACCGCACCTACCGCTGTGCCC...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCCAGGATCCGGTATGCTaGCTGTGTGTCCGCAAAGTA | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPQDPVC*LCVRKV Trigger: TACTTTGCGGACACACAGCCAGCATACCGGATCCTG...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | AAAACTGGGGAGCCTGCCCTCCCAGTGCTGACCTCTCATGCCCAATCTGCCTCTTGGTCCGCTGCAGCATaGGCACGGTGGCCTCCACAT | + |
Preference number: 4 (lower is better) Translates to: KTGEPALPVLTSHAQSASWSAAA*ARWPPH Trigger: ATGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCA...AGAGGCAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAGGCTCCCCAGTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCCTCCTTCACCTCAGGTaGCAGTGTGCTGAACAAGTC | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPLLHLR*QCAEQV Trigger: GACTTGTTCAGCACACTGCCACCTGAGGTGAAGGAG...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGCTCCTTCACCTCAGGTaGCAGTGTGCTGAACAAGTC | + |
Preference number: 4 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWLLHLR*QCAEQV Trigger: GACTTGTTCAGCACACTGCCACCTGAGGTGAAGGAG...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGGGCGCTCGAGGTTGGTaGGGTTGCCGATCTGGATGG | + |
Preference number: 4 (lower is better) Translates to: YPDLSYCSWASGAGSASEGARGW*GCRSGW Trigger: CCATCCAGATCGGCAACCTCACCAACCTCGAGCGCC...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGACAGCTTCTGCAGGTaGACGCCCACATCCGTGACC | + |
Preference number: 4 (lower is better) Translates to: FWSPASACPGCPCPSGRKDSFCR*TPTSVT Trigger: GGTCACGGATGTGGGCGTGCACCTGCAGAAGCTGTC...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTCGAACGAGTACTTCTTaGGGGAGCGCCGCAGCATCC | + |
Preference number: 4 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSRTSTS*GSAAAS Trigger: GGATGCTGCGGCGCTCCCTCAAGAAGTACTCGTTCG...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGGCGTCCACTCGTTGTTaGGGTTCAGCTGGCGCAGCT | + |
Preference number: 4 (lower is better) Translates to: YPDLSYCSWASGAGSASEASTRC*GSAGAA Trigger: AGCTGCGCCAGCTGAACCTCAACAACGAGTGGACGC...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGCACGCCCACATCCGTaGCCACCTGCGGCAGCTTGC | + |
Preference number: 4 (lower is better) Translates to: EAEMASSVKTLIVQILHSARPHP*PPAAAC Trigger: GCAAGCTGCCGCAGGTGGTCACGGATGTGGGCGTGC...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAACGGTCCACGATGCCCTaGTCAATCCGTGACTTGGTC | + |
Preference number: 4 (lower is better) Translates to: FWSPASACPGCPCPSGRKRSTMP*SIRDLV Trigger: GACCAAGTCACGGATTGAGCAGGGCATCGTGGACCG...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAATCCGTGAACTTGATGTaGAGGGCCCGCAGGTTCTCC | + |
Preference number: 4 (lower is better) Translates to: FWSPASACPGCPCPSGRKSVNLM*RARRFS Trigger: GGAGAACCTGCGGGCCCTGCACATCAAGTTCACGGA...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGCGATCTGCGTCAGGTTaGTCAGCTCGCCCACTCTCG | + |
Preference number: 4 (lower is better) Translates to: YPDLSYCSWASGAGSASERSASG*SARPLS Trigger: CGAGAGTGGGCGAGCTGACCAACCTGACGCAGATCG...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGCAGCAATCATCAGCATaGCGATGGAGATGTAATCAG | + |
Preference number: 4 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWQQSSA*RWRCNQ Trigger: CTGATTACATCTCCATCGTCATGCTGATGATTGCTG...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAATCATCTTGTCCTGGGTaGCTTGCAGCGTCCCTCCAA | + |
Preference number: 4 (lower is better) Translates to: FWSPASACPGCPCPSGRKSSCPG*LAASLQ Trigger: TTGGAGGGACGCTGCAAGTCACCCAGGACAAGATGA...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTACCCGTTCATCTTGCTaGAGGCTGGCTTGGGGTCAC | + |
Preference number: 4 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSTRSSC*RLAWGH Trigger: GTGACCCCAAGCCAGCCTTCAGCAAGATGAACGGGT...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTCCTGGGCGTTCTTGGTaGGGCGCTGGCGCAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: EAEMASSVKTLIVQILHSPGRSW*GAGAAC Trigger: ACAAGCTGCGCCAGCGCCTCACCAAGAACGCCCAGG...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR GCA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCGCTGATGTAGAAGGATaGCAAGATCTTGAAGAGCGT | + |
Preference number: 4 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPADVEG*QDLEER Trigger: ACGCTCTTCAAGATCTTGGCATCCTTCTACATCAGC...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCTTCAGGTCAATCTCCTaGAGGTTGTGGAGGCTAAAG | + |
Preference number: 4 (lower is better) Translates to: PASACPGCPCPSGRKGTSFRSIS*RLWRLK Trigger: CTTTAGCCTCCACAACCTGCAGGAGATTGACCTGAA...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTAGGCTAAAGATGGAGTaGGGGATGCGCTCCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSRLKME*GMRSRS Trigger: TGACCTGGAGCGCATCCCTCACTCCATCTTTAGCCT...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGGTAGCGGTTGTTCTCTaGACTCAGGTTGCCCGTCAG | + |
Preference number: 4 (lower is better) Translates to: YPDLSYCSWASGAGSASEVAVVL*TQVARQ Trigger: CTGACGGGCAACCTGAGTGCAGAGAACAACCGCTAC...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTTTGAGGCCTGTGAGCTaGGCGATGCTGGGCGGGATG | + |
Preference number: 4 (lower is better) Translates to: EAEMASSVKTLIVQILHSLRPVS*AMLGGM Trigger: CATCCCGCCCAGCATCGCCCAGCTCACAGGCCTCAA...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAATGGTGCGTGGAAACTTaGACCAGAAGTTGCTACAGG | + |
Preference number: 4 (lower is better) Translates to: FWSPASACPGCPCPSGRKWCVET*TRSCYR Trigger: CCTGTAGCAACTTCTGGTTCAAGTTTCCACGCACCA...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTACTCTGGGCTGGAGGCTaGCCAGCCCCGGAAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLLWAGG*PAPEGV Trigger: GACTCCTTCCGGGGCTGGGCAGCCTCCAGCCCAGAG...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGACCTTGATGATGGTCTaGCGCATGTACAGGCGGTAC | + |
Preference number: 4 (lower is better) Translates to: YPDLSYCSWASGAGSASETLMMV*RMYRRY Trigger: GTACCGCCTGTACATGCGGCAGACCATCATCAAGGT...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTGGATGTCACTGTAGCTaGTCTCCTCTCGGATCGACT | + |
Preference number: 4 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSGCHCS*SPLGST Trigger: AGTCGATCCGAGAGGAGAGCAGCTACAGTGACATCC...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGCAGGATCCGGTATGCTaGCTGTGTGTCCGCAAAGTA | + |
Preference number: 4 (lower is better) Translates to: YPDLSYCSWASGAGSASEQDPVC*LCVRKV Trigger: TACTTTGCGGACACACAGCCAGCATACCGGATCCTG...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | CCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGGAAACCTGGGCGTTCTTGGTaGGGCGCTGGCGCAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: PQRQEILFNVLLLCSRGKPGRSW*GAGAAC Trigger: ACAAGCTGCGCCAGCGCCTCACCAAGAACGCCCAGG...TTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTCGGTCCACGATGCCCTaGTCAATCCGTGACTTGGTC | + |
Preference number: 4 (lower is better) Translates to: EAEMASSVKTLIVQILHSRSTMP*SIRDLV Trigger: GACCAAGTCACGGATTGAGCAGGGCATCGTGGACCG...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACCCAGGTAGCGCAGCTTaGGGCAGTAGAAGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNPGSAA*GSRRAG Trigger: CCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGG...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACCCCCGAAGCTCGATCTaGGTCAGGTTGGTCAGCTCG | + |
Preference number: 4 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNPRSSI*VRLVSS Trigger: CGAGCTGACCAACCTGACGCAGATCGAGCTTCGGGG...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCGCAGGACTGTGGAGTTaGGGTAAGTGGGCTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: ASSVKTLIVQILHSETSLAGLWS*GKWALG Trigger: GCCCAGAGCCCACTTACCCCAACTCCACAGTCCTGC...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACGCGTCGGCAGGACTGTaGAGTTGGGGTAAGTGGGCT | + |
Preference number: 4 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNASAGL*SWGKWA Trigger: AGCCCACTTACCCCAACTCCACAGTCCTGCCGACGC...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTCCGACAGGGCCCGTGTaGTCCACGGTGAGTCGAAGC | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCPTGPV*STVSRS Trigger: GCTTCGACTCACCGTGGACCACACGGGCCCTGTCGG...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGCCGTGTGGTCCACGGTaGGTCGAAGCACTTGAGCAG | + |
Preference number: 4 (lower is better) Translates to: AHTPKTGNSVQCLAALLKPCGPR*VEALEQ Trigger: CTGCTCAAGTGCTTCGACTCACCGTGGACCACACGG...CTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGGCGCTCGAGGTTGGTaGGGTTGCCGATCTGGATGG | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCGARGW*GCRSGW Trigger: CCATCCAGATCGGCAACCTCACCAACCTCGAGCGCC...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | AAATACTGCACTCTGAGACTAGTCTCAGAGGTTCTGGTCTCCAGCAAGTGCCTGTCTCTGCACTCAGGTTaGCCGTCAGGTGCAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: KYCTLRLVSEVLVSSKCLSLHSG*PSGAAP Trigger: AGGAGCTGCACCTGACGGGCAACCTGAGTGCAGAGA...CAGGCACTTGCTGGAGACCAGAACCTCTGAGACTAGTCTCAGAGTGCAGTATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGACAGCTTCTGCAGGTaGACGCCCACATCCGTGACC | + |
Preference number: 4 (lower is better) Translates to: PTPQRQEILFNVLLLCSRDSFCR*TPTSVT Trigger: GGTCACGGATGTGGGCGTGCACCTGCAGAAGCTGTC...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCCTCGAGGGCAGCGACTaGAGTACATTGTTGCCCAGG | + |
Preference number: 4 (lower is better) Translates to: ASSVKTLIVQILHSETSLLEGSD*STLLPR Trigger: CCTGGGCAACAATGTACTGCAGTCGCTGCCCTCGAG...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTAGGCATTCCAGCCGGTTaGCCCGAAGCTCGATCTGCG | + |
Preference number: 4 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLGIPAG*PEARSA Trigger: CGCAGATCGAGCTTCGGGGCAACCGGCTGGAATGCC...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | AAAACTGGGGAGCCTGCCCTCCCAGTGCTGACCTCTCATGCCCAATCTGCCTCTCTTCGAACTGGTGCGTaGAAACTTGAACCAGAAGTT | + |
Preference number: 4 (lower is better) Translates to: KTGEPALPVLTSHAQSASLRTGA*KLEPEV Trigger: AACTTCTGGTTCAAGTTTCCACGCACCAGTTCGAAG...AGAGGCAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAGGCTCCCCAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTTGGTCCGCTGCAGCATaGGCACGGTGGCCTCCACAT | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCWSAAA*ARWPPH Trigger: ATGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCA...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGTTGTTGAGGTTCAGCTaGCGCAGCTTGTTTTCACTC | + |
Preference number: 4 (lower is better) Translates to: YPDLSYCSWASGAGSASELLRFS*RSLFSL Trigger: GAGTGAAAACAAGCTGCGCCAGCTGAACCTCAACAA...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTATCTTGGCTGCCGTGTaGTACAGCCACAGCTCCTTG | + |
Preference number: 4 (lower is better) Translates to: EAEMASSVKTLIVQILHSILAAV*YSHSSL Trigger: CAAGGAGCTGTGGCTGTACCACACGGCAGCCAAGAT...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACTACAGGCCAGGAAGATaGGGGTGTGCAGAAGCACGA | + |
Preference number: 4 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNYRPGR*GCAEAR Trigger: TCGTGCTTCTGCACACCCTCATCTTCCTGGCCTGTA...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGACCCGTTCATCTTGCTaGAGGCTGGCTTGGGGTCAC | + |
Preference number: 4 (lower is better) Translates to: PTPQRQEILFNVLLLCSRTRSSC*RLAWGH Trigger: GTGACCCCAAGCCAGCCTTCAGCAAGATGAACGGGT...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGCCCTGCTCAATCCGTaGCTTGGTCCGCTGCAGCAT | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCALLNP*LGPLQH Trigger: ATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGC...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GAACTGAGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAACGAACGAGTACTTCTTaGGGGAGCGCCGCAGCATCC | + |
Preference number: 4 (lower is better) Translates to: ELSLQVRPTCNGLLHGCQRTSTS*GSAAAS Trigger: GGATGCTGCGGCGCTCCCTCAAGAAGTACTCGTTCG...TTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACTCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGAACAGGGCCTTCGCCTaGTCCCCTTCCTTCTTGTCC | + |
Preference number: 4 (lower is better) Translates to: AHTPKTGNSVQCLAALLKNRAFA*SPSFLS Trigger: GGACAAGAAGGAAGGGGAGCAGGCGAAGGCCCTGTT...CTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAAAACAGGGCCTTCGCCTaGTCCCCTTCCTTCTTGTCC | + |
Preference number: 4 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQNRAFA*SPSFLS Trigger: GGACAAGAAGGAAGGGGAGCAGGCGAAGGCCCTGTT...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGGATGTCACTGTAGCTaGTCTCCTCTCGGATCGACT | + |
Preference number: 4 (lower is better) Translates to: EAEMASSVKTLIVQILHSGCHCS*SPLGST Trigger: AGTCGATCCGAGAGGAGAGCAGCTACAGTGACATCC...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTAAGGTTGCCCGTCAGGTaGAGCTCCTCCAGCGTCTTC | + |
Preference number: 4 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLRLPVR*SSSSVF Trigger: GAAGACGCTGGAGGAGCTGCACCTGACGGGCAACCT...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | CCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGGAAAAGGTTGCCCGTCAGGTaGAGCTCCTCCAGCGTCTTC | + |
Preference number: 4 (lower is better) Translates to: PQRQEILFNVLLLCSRGKRLPVR*SSSSVF Trigger: GAAGACGCTGGAGGAGCTGCACCTGACGGGCAACCT...TTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAAACATCCGTGACCACCTaGGGCAGCTTGCTCAGGTTG | + |
Preference number: 4 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQTSVTT*GSLLRL Trigger: CAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGT...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTCCAGGTAGCGCAGCTTaGGGCAGTAGAAGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCPGSAA*GSRRAG Trigger: CCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGG...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGAGGTTCTGGAGGTTCTaGAGGAGGCCAATGTCGGCG | + |
Preference number: 4 (lower is better) Translates to: PTPQRQEILFNVLLLCSRRFWRF*RRPMSA Trigger: CGCCGACATTGGCCTCCTGCAGAACCTCCAGAACCT...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAGGCATTCCAGCCGGTTaGCCCGAAGCTCGATCTGCG | + |
Preference number: 4 (lower is better) Translates to: LVCSISKGYIHDTTQKTQGIPAG*PEARSA Trigger: CGCAGATCGAGCTTCGGGGCAACCGGCTGGAATGCC...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGCTTCGAACTGGTGCGTaGAAACTTGAACCAGAAGTT | + |
Preference number: 4 (lower is better) Translates to: YPDLSYCSWASGAGSASELRTGA*KLEPEV Trigger: AACTTCTGGTTCAAGTTTCCACGCACCAGTTCGAAG...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGCTCAATCCGTGACTTaGTCCGCTGCAGCATGGGCA | + |
Preference number: 4 (lower is better) Translates to: PTPQRQEILFNVLLLCSRAQSVT*SAAAWA Trigger: TGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGC...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTCGATGCTGGGCGGGATaGTCACGTCGGGTATCAGCT | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCRCWAG*SRRVSA Trigger: AGCTGATACCCGACGTGACCATCCCGCCCAGCATCG...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAAGTAGAAGAGCTGGGTaGGGATTTTCTCGATTTTGT | + |
Preference number: 4 (lower is better) Translates to: FWSPASACPGCPCPSGRKSRRAG*GFSRFC Trigger: ACAAAATCGAGAAAATCCCCACCCAGCTCTTCTACT...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACTGCAGGAGTCTTTGGTaGCCCACTTACAAGGTAGGC | + |
Preference number: 4 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNCRSLW*PTYKVG Trigger: GCCTACCTTGTAAGTGGGTCACCAAAGACTCCTGCA...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAGCCCTGCTCAATCCGTaGCTTGGTCCGCTGCAGCAT | + |
Preference number: 4 (lower is better) Translates to: LVCSISKGYIHDTTQKTQALLNP*LGPLQH Trigger: ATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGC...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTACCCGCAGCCCGTCAATaGCGATGTAGCGGTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLPAARQ*RCSGCS Trigger: AGAACAACCGCTACATCGTCATTGACGGGCTGCGGG...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTTCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCT | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCSGCCG*GPGSAA Trigger: AGCTGCGCTACCTGGACCTCAGCCACAACAACCTGA...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR GCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTAGGGCACAGCGGTAGGTaGGGTAGCCTGTCAGGCTCT | + |
Preference number: 4 (lower is better) Translates to: LILSASPKKKKVNTARVLGHSGR*GSLSGS Trigger: AGAGCCTGACAGGCTACCGCACCTACCGCTGTGCCC...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR GCA 90 bp | GAACTGAGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGTTCTGGAGGTTCTaGAGGAGGCCAATGTCGGCG | + |
Preference number: 4 (lower is better) Translates to: ELSLQVRPTCNGLLHGCQRFWRF*RRPMSA Trigger: CGCCGACATTGGCCTCCTGCAGAACCTCCAGAACCT...TTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACTCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR GCA 90 bp | CCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGGAAACTCGAGGGCAGCGACTaGAGTACATTGTTGCCCAGG | + |
Preference number: 4 (lower is better) Translates to: PQRQEILFNVLLLCSRGKLEGSD*STLLPR Trigger: CCTGGGCAACAATGTACTGCAGTCGCTGCCCTCGAG...TTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | AAATACTGCACTCTGAGACTAGTCTCAGAGGTTCTGGTCTCCAGCAAGTGCCTGCAGATCATCTTGTCCTaGGTGACTTGCAGCGTCCCT | + |
Preference number: 4 (lower is better) Translates to: KYCTLRLVSEVLVSSKCLQIILS*VTCSVP Trigger: AGGGACGCTGCAAGTCACCCAGGACAAGATGATCTG...CAGGCACTTGCTGGAGACCAGAACCTCTGAGACTAGTCTCAGAGTGCAGTATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGCATCTTGCTGAAGGCTaGCTTGGGGTCACTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: AHTPKTGNSVQCLAALLKHLAEG*LGVTLL Trigger: GAGGAGAGTGACCCCAAGCCAGCCTTCAGCAAGATG...CTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | GAACTGAGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAATCATCTTGTCCTGGGTaGCTTGCAGCGTCCCTCCAA | + |
Preference number: 4 (lower is better) Translates to: ELSLQVRPTCNGLLHGCQSSCPG*LAASLQ Trigger: TTGGAGGGACGCTGCAAGTCACCCAGGACAAGATGA...TTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACTCAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCGATCTAGGTCATACTTaGTACCTGTGGGGCCTGTGT | + |
Preference number: 4 (lower is better) Translates to: ASSVKTLIVQILHSETSLDLGHT*YLWGLC Trigger: ACACAGGCCCCACAGGTATCAAGTATGACCTAGATC...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR TCA 90 bp | CCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGGAAATACAGGCCAGGAAGATaGGGGTGTGCAGAAGCACGA | + |
Preference number: 4 (lower is better) Translates to: PQRQEILFNVLLLCSRGKYRPGR*GCAEAR Trigger: TCGTGCTTCTGCACACCCTCATCTTCCTGGCCTGTA...TTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAATGGTGCCCTCATTGTTaGTGGACAGCTTCTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQWCPHC*WTASAG Trigger: ACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCA...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTAAGGCTAAAGATGGAGTaGGGGATGCGCTCCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLRLKME*GMRSRS Trigger: TGACCTGGAGCGCATCCCTCACTCCATCTTTAGCCT...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAATCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCT | + |
Preference number: 4 (lower is better) Translates to: LVCSISKGYIHDTTQKTQSGCCG*GPGSAA Trigger: AGCTGCGCTACCTGGACCTCAGCCACAACAACCTGA...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | CCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGGAAACAGGTGGCAGTGTGCTaGACAAGTCCTCTTCCACCA | + |
Preference number: 4 (lower is better) Translates to: PQRQEILFNVLLLCSRGKQVAVC*TSPLPP Trigger: TGGTGGAAGAGGACTTGTTCAGCACACTGCCACCTG...TTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGATTGATGGACAGCTTCTaGAGGTGCACGCCCACATCC | + |
Preference number: 4 (lower is better) Translates to: FPRVTSMTRRRKHKWTERLMDSF*RCTPTS Trigger: GGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAA...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTAAGGCAGGTGAGGCGGTaGAGGTGCTGGAAGCTGATG | + |
Preference number: 4 (lower is better) Translates to: LILSASPKKKKVNTARVLRQVRR*RCWKLM Trigger: CATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCT...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTACGATGCTGGGCGGGATaGTCACGTCGGGTATCAGCT | + |
Preference number: 4 (lower is better) Translates to: LILSASPKKKKVNTARVLRCWAG*SRRVSA Trigger: AGCTGATACCCGACGTGACCATCCCGCCCAGCATCG...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAAGGTTGCCGATCTGGATaGGGATGTAGGCAATGTGGT | + |
Preference number: 4 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQGCRSG*GCRQCG Trigger: ACCACATTGCCTACATCCCCATCCAGATCGGCAACC...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CAA 72 bp | CAGGGTGCTAAACACTTCCCACAGAGCCGGACCTTCTaGGGAATGTGTAAGTTATCTGGAGGGAAAAGATGG | + |
Preference number: 4 (lower is better) Translates to: QGAKHFPQSRTF*GMCKLSGGKRW Trigger: CCATCTTTTCCCTCCAGATAACTTACACATTCCCAAGAAGGTCCGGCTCTGTGGGAAGTGTTTAGCACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CAA 72 bp | CACCCTACCCAACTCTGCCCAAGTCTGGGTGGGCACTaGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTG | + |
Preference number: 4 (lower is better) Translates to: HPTQLCPSLGGH*ILSASPKKKKV Trigger: CACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAAGTGCCCACCCAGACTTGGGCAGAGTTGGGTAGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGATCTAGGTCATACTTaGTACCTGTGGGGCCTGTGT | + |
Preference number: 4 (lower is better) Translates to: AHTPKTGNSVQCLAALLKDLGHT*YLWGLC Trigger: ACACAGGCCCCACAGGTATCAAGTATGACCTAGATC...CTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAATGGTGCGTGGAAACTTaGACCAGAAGTTGCTACAGG | + |
Preference number: 4 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQWCVET*TRSCYR Trigger: CCTGTAGCAACTTCTGGTTCAAGTTTCCACGCACCA...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTCTCGCTGACTGTAGATaGCTTCTTGTCCATGGACCC | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCLADCR*LLVHGP Trigger: GGGTCCATGGACAAGAAGTCATCTACAGTCAGCGAG...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGATGGTGCCCTCATTGTTaGTGGACAGCTTCTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: FPRVTSMTRRRKHKWTERWCPHC*WTASAG Trigger: ACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCA...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTACTTCAGGATCCGGTATaGTGGCTGTGTGTCCGCAAA | + |
Preference number: 4 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLLQDPV*WLCVRK Trigger: TTTGCGGACACACAGCCAGCATACCGGATCCTGAAG...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTACCGATCGGTCCACGATaGCCTGCTCAATCCGTGACT | + |
Preference number: 4 (lower is better) Translates to: LILSASPKKKKVNTARVLPIGPR*PAQSVT Trigger: AGTCACGGATTGAGCAGGGCATCGTGGACCGATCGG...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTATCTCTGCACTCAGGTTaGCCGTCAGGTGCAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: LILSASPKKKKVNTARVLSLHSG*PSGAAP Trigger: AGGAGCTGCACCTGACGGGCAACCTGAGTGCAGAGA...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACTTCAGGTCAATCTCCTaGAGGTTGTGGAGGCTAAAG | + |
Preference number: 4 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNFRSIS*RLWRLK Trigger: CTTTAGCCTCCACAACCTGCAGGAGATTGACCTGAA...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTAGCTCAATCCGTGACTTaGTCCGCTGCAGCATGGGCA | + |
Preference number: 4 (lower is better) Translates to: LILSASPKKKKVNTARVLAQSVT*SAAAWA Trigger: TGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGC...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGAGGTTGCCGATCTGGATaGGGATGTAGGCAATGTGGT | + |
Preference number: 4 (lower is better) Translates to: FPRVTSMTRRRKHKWTERGCRSG*GCRQCG Trigger: ACCACATTGCCTACATCCCCATCCAGATCGGCAACC...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCCAGCAATCATCAGCATaGCGATGGAGATGTAATCAG | + |
Preference number: 4 (lower is better) Translates to: ASSVKTLIVQILHSETSLQQSSA*RWRCNQ Trigger: CTGATTACATCTCCATCGTCATGCTGATGATTGCTG...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTCCGTGTGGTCCACGGTaGGTCGAAGCACTTGAGCAG | + |
Preference number: 4 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIPCGPR*VEALEQ Trigger: CTGCTCAAGTGCTTCGACTCACCGTGGACCACACGG...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAATCTCCTCAATGGTCTTaGGGTTGTTGTCCTTCAGGT | + |
Preference number: 4 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQSPQWS*GCCPSG Trigger: ACCTGAAGGACAACAACCTCAAGACCATTGAGGAGA...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTATTGATGGACAGCTTCTaGAGGTGCACGCCCACATCC | + |
Preference number: 4 (lower is better) Translates to: LILSASPKKKKVNTARVLLMDSF*RCTPTS Trigger: GGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAA...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTCCCCGAAGCTCGATCTaGGTCAGGTTGGTCAGCTCG | + |
Preference number: 4 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIPRSSI*VRLVSS Trigger: CGAGCTGACCAACCTGACGCAGATCGAGCTTCGGGG...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAACAGATCATCTTGTCCTaGGTGACTTGCAGCGTCCCT | + |
Preference number: 4 (lower is better) Translates to: LVCSISKGYIHDTTQKTQQIILS*VTCSVP Trigger: AGGGACGCTGCAAGTCACCCAGGACAAGATGATCTG...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGATCTCCTCAATGGTCTTaGGGTTGTTGTCCTTCAGGT | + |
Preference number: 4 (lower is better) Translates to: FPRVTSMTRRRKHKWTERSPQWS*GCCPSG Trigger: ACCTGAAGGACAACAACCTCAAGACCATTGAGGAGA...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTCCGATCGGTCCACGATaGCCTGCTCAATCCGTGACT | + |
Preference number: 4 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIPIGPR*PAQSVT Trigger: AGTCACGGATTGAGCAGGGCATCGTGGACCGATCGG...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTAGTCCACGTCGAACTTaGTGTTGTGCACATAGTAGA | + |
Preference number: 4 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCSPRRT*CCAHSR Trigger: TCTACTATGTGCACAACATCAAGTTCGACGTGGACT...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR GCA 90 bp | CCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGGAAAGCTGATGTAGAAGGATaGCAAGATCTTGAAGAGCGT | + |
Preference number: 4 (lower is better) Translates to: PQRQEILFNVLLLCSRGKADVEG*QDLEER Trigger: ACGCTCTTCAAGATCTTGGCATCCTTCTACATCAGC...TTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTATCTTGGCTGCCGTGTaGTACAGCCACAGCTCCTTG | + |
Preference number: 4 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIILAAV*YSHSSL Trigger: CAAGGAGCTGTGGCTGTACCACACGGCAGCCAAGAT...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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3UTR CAA 72 bp | GAACTGAGTCTACAAGTCAGACCCACGTGTAACGGATaGCTTCATGGTTGTCAAAGGCTAGTGTGCAGTATT | + |
Preference number: 4 (lower is better) Translates to: ELSLQVRPTCNG*LHGCQRLVCSI Trigger: AATACTGCACACTAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACTCAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR TCA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAAGTCCACGTCGAACTTaGTGTTGTGCACATAGTAGA | + |
Preference number: 4 (lower is better) Translates to: LVCSISKGYIHDTTQKTQSPRRT*CCAHSR Trigger: TCTACTATGTGCACAACATCAAGTTCGACGTGGACT...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTCTTCAGGATCCGGTATaGTGGCTGTGTGTCCGCAAA | + |
Preference number: 4 (lower is better) Translates to: DIIIKTRDAKTCLSVHVILQDPV*WLCVRK Trigger: TTTGCGGACACACAGCCAGCATACCGGATCCTGAAG...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR GCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTACCTTGATGATGGTCTaGCGCATGTACAGGCGGTAC | + |
Preference number: 4 (lower is better) Translates to: DIIIKTRDAKTCLSVHVITLMMV*RMYRRY Trigger: GTACCGCCTGTACATGCGGCAGACCATCATCAAGGT...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CCA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTAGTAGAAGAGCTGGGTaGGGATTTTCTCGATTTTGT | + |
Preference number: 4 (lower is better) Translates to: DIIIKTRDAKTCLSVHVISRRAG*GFSRFC Trigger: ACAAAATCGAGAAAATCCCCACCCAGCTCTTCTACT...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCAGGCGCTGGCGCAGCTaGTCCAGCGTCCACTCGTTG | + |
Preference number: 5 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPRRWRS*SSVHSL Trigger: CAACGAGTGGACGCTGGACAAGCTGCGCCAGCGCCT...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 90 bp | TCCCGCAGGAAGGCCAGGGCAGGAGCCTCGATCTTGGCTGCCGTGTaGTACAGCCACAGCTCCTTGAGGCCTGTGAGCTGGGCGATGCTG | + |
Preference number: 5 (lower is better) Translates to: SRRKARAGASILAAV*YSHSSLRPVSWAML Trigger: CAGCATCGCCCAGCTCACAGGCCTCAAGGAGCTGTGGCTGTACCACACGGCAGCCAAGATCGAGGCTCCTGCCCTGGCCTTCCTGCGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCTTGTCCTGGGCGTTCTaGGTGAGGCGCTGGCGCAGC | + |
Preference number: 5 (lower is better) Translates to: PASACPGCPCPSGRKGTSLSWAF*VRRWRS Trigger: GCTGCGCCAGCGCCTCACCAAGAACGCCCAGGACAA...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS TCA 90 bp | CAGTACGCCCGTCTCCGATCGGTCCACGATGCCCTGCTCAATCCGTaGCTTGGTCCGCTGCAGCATGGGCACGGTGGCCTCCACATCCTC | + |
Preference number: 5 (lower is better) Translates to: QYARLRSVHDALLNP*LGPLQHGHGGLHIL Trigger: GAGGATGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGAGACGGGCGTACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 90 bp | TTGGCTGCCGTGTGGTACAGCCACAGCTCCTTGAGGCCTGTGAGCTaGGCGATGCTGGGCGGGATGGTCACGTCGGGTATCAGCTCCAGC | + |
Preference number: 5 (lower is better) Translates to: LAAVWYSHSSLRPVS*AMLGGMVTSGISSS Trigger: GCTGGAGCTGATACCCGACGTGACCATCCCGCCCAGCATCGCCCAGCTCACAGGCCTCAAGGAGCTGTGGCTGTACCACACGGCAGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGCCCCGGAAGGAGTCGTaGCAGGAGTCTTTGGTGACC | + |
Preference number: 5 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWPRKES*QESLVT Trigger: GGTCACCAAAGACTCCTGCAACGACTCCTTCCGGGG...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGTTGAGTCGCAGCACCTaGAGGCGTTTGAGCTCCCGC | + |
Preference number: 5 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWLSRST*RRLSSR Trigger: GCGGGAGCTCAAACGCCTCAAGGTGCTGCGACTCAA...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS TCA 90 bp | GCAGGAGGCCAATGTCGGCGGGGAGGAAGGTCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCTTGCGGCAGTAGAAGAGCTGGGTGG | + |
Preference number: 5 (lower is better) Translates to: AGGQCRRGGRSGCCG*GPGSAACGSRRAGW Trigger: CCACCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGGACCTCAGCCACAACAACCTGACCTTCCTCCCCGCCGACATTGGCCTCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 90 bp | TCCTTCTTGTCCAGTACGCCCGTCTCCGATCGGTCCACGATGCCCTaGTCAATCCGTGACTTGGTCCGCTGCAGCATGGGCACGGTGGCC | + |
Preference number: 5 (lower is better) Translates to: SFLSSTPVSDRSTMP*SIRDLVRCSMGTVA Trigger: GGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGAGACGGGCGTACTGGACAAGAAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 90 bp | CCCCTTCCTTCTTGTCCAGTACGCCCGTCTCCGATCGGTCCACGATaGCCTGCTCAATCCGTGACTTGGTCCGCTGCAGCATGGGCACGG | + |
Preference number: 5 (lower is better) Translates to: PLPSCPVRPSPIGPR*PAQSVTWSAAAWAR Trigger: CCGTGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGAGACGGGCGTACTGGACAAGAAGGAAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCAAGGATGCCAAGATCTaGAAGAGCGTGGCCAGGGGG | + |
Preference number: 5 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPKDAKI*KSVARG Trigger: CCCCCTGGCCACGCTCTTCAAGATCTTGGCATCCTT...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCTTCTCTGCACTCAGGTaGCCCGTCAGGTGCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: PASACPGCPCPSGRKGTSFSALR*PVRCSS Trigger: GGAGCTGCACCTGACGGGCAACCTGAGTGCAGAGAA...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 90 bp | GCAGGCATTCCAGCCGGTTGCCCCGAAGCTCGATCTGCGTCAGGTTaGTCAGCTCGCCCACTCTCGAGGGCAGCGACTGCAGTACATTGT | + |
Preference number: 5 (lower is better) Translates to: AGIPAGCPEARSASG*SARPLSRAATAVHC Trigger: ACAATGTACTGCAGTCGCTGCCCTCGAGAGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTTCGGGGCAACCGGCTGGAATGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCTCGAACGAGTACTTCTaGAGGGAGCGCCGCAGCATC | + |
Preference number: 5 (lower is better) Translates to: PASACPGCPCPSGRKGTSSNEYF*RERRSI Trigger: GATGCTGCGGCGCTCCCTCAAGAAGTACTCGTTCGA...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCACCACCTGCGGCAGCTaGCTCAGGTTGCTCTTGAGT | + |
Preference number: 5 (lower is better) Translates to: PASACPGCPCPSGRKGTSTTCGS*LRLLLS Trigger: ACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGT...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 90 bp | TCCGATCGGTCCACGATGCCCTGCTCAATCCGTGACTTGGTCCGCTaGAGCATGGGCACGGTGGCCTCCACATCCTCGCTGACTGTAGAT | + |
Preference number: 5 (lower is better) Translates to: SDRSTMPCSIRDLVR*SMGTVASTSSLTVD Trigger: ATCTACAGTCAGCGAGGATGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTAGGCGCTGGCGCAGCTaGTCCAGCGTCCACTCGTTG | + |
Preference number: 5 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSRRWRS*SSVHSL Trigger: CAACGAGTGGACGCTGGACAAGCTGCGCCAGCGCCT...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAGGGACCAGCAGCGCTTCAATCCTATaGGCTGTGACGGCCAGGTTC | + |
Preference number: 5 (lower is better) Translates to: PASACPGCPCPSGRKGTSSASIL*AVTARF Trigger: GAACCTGGCCGTCACAGCCAATAGGATTGAAGCGCT...GCTGGTCCCTTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 90 bp | TTGATGGACAGCTTCTGCAGGTGCACGCCCACATCCGTGACCACCTaGGGCAGCTTGCTCAGGTTGCTCTTGAGTCGCAGCACCTTGAGG | + |
Preference number: 5 (lower is better) Translates to: LMDSFCRCTPTSVTT*GSLLRLLLSRSTLR Trigger: CCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 90 bp | TGGTCAGCTCGCCCACTCTCGAGGGCAGCGACTGCAGTACATTGTTaGCCAGGTGTAGAGCCCGTAGCTTCCGACACTGGAAGAGCTCTG | + |
Preference number: 5 (lower is better) Translates to: WSARPLSRAATAVHC*PGVEPVASDTGRAL Trigger: CAGAGCTCTTCCAGTGTCGGAAGCTACGGGCTCTACACCTGGGCAACAATGTACTGCAGTCGCTGCCCTCGAGAGTGGGCGAGCTGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAATGCTCCCCTTCCTTCTaGTCCAGTACGCCCGTCTCC | + |
Preference number: 5 (lower is better) Translates to: FWSPASACPGCPCPSGRKCSPSF*SSTPVS Trigger: GGAGACGGGCGTACTGGACAAGAAGGAAGGGGAGCA...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGTACAGCCACAGCTCCTaGAGGCCTGTGAGCTGGGCG | + |
Preference number: 5 (lower is better) Translates to: YPDLSYCSWASGAGSASEYSHSS*RPVSWA Trigger: CGCCCAGCTCACAGGCCTCAAGGAGCTGTGGCTGTA...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 90 bp | AGCGCTTCAATCCTATTGGCTGTGACGGCCAGGTTCTGGAGGTTCTaGAGGAGGCCAATGTCGGCGGGGAGGAAGGTCAGGTTGTTGTGG | + |
Preference number: 5 (lower is better) Translates to: SASILLAVTARFWRF*RRPMSAGRKVRLLW Trigger: CCACAACAACCTGACCTTCCTCCCCGCCGACATTGGCCTCCTGCAGAACCTCCAGAACCTGGCCGTCACAGCCAATAGGATTGAAGCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTTTGCTGAAGGCTGGCTaGGGGTCACTCTCCTCCACC | + |
Preference number: 5 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSLLKAG*GSLSST Trigger: GGTGGAGGAGAGTGACCCCAAGCCAGCCTTCAGCAA...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTAGCGTCCACTCGTTGTaGAGGTTCAGCTGGCGCAGC | + |
Preference number: 5 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSSVHSL*RFSWRS Trigger: GCTGCGCCAGCTGAACCTCAACAACGAGTGGACGCT...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTTTGAGTCGCAGCACCTaGAGGCGTTTGAGCTCCCGC | + |
Preference number: 5 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSLSRST*RRLSSR Trigger: GCGGGAGCTCAAACGCCTCAAGGTGCTGCGACTCAA...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCAGCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGTTGAGGACAATGAGCTaGGTGCCCTCATTGTTGATG | + |
Preference number: 5 (lower is better) Translates to: PSGRKGTSPSVPAFWSGWLRTMS*VPSLLM Trigger: CATCAACAATGAGGGCACCAAGCTCATTGTCCTCAA...CCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 90 bp | ACAATGAGCTTGGTGCCCTCATTGTTGATGGACAGCTTCTGCAGGTaGACGCCCACATCCGTGACCACCTGCGGCAGCTTGCTCAGGTTG | + |
Preference number: 5 (lower is better) Translates to: TMSLVPSLLMDSFCR*TPTSVTTCGSLLRL Trigger: CAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCAAGCTCATTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCGGGAGGAAAGGGACCAGCCCCTCAGTCCCTGCTTTCTGGTCTGGCTGGACCCTCAATGGTCTTGAGGTaGTTGTCCTTCAGGTCAATC | + |
Preference number: 5 (lower is better) Translates to: AGGKGPAPQSLLSGLAGPSMVLR*LSFRSI Trigger: GATTGACCTGAAGGACAACAACCTCAAGACCATTGA...GGGTCCAGCCAGACCAGAAAGCAGGGACTGAGGGGCTGGTCCCTTTCCTCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS TCA 90 bp | CTGCAGCATGGGCACGGTGGCCTCCACATCCTCGCTGACTGTAGATaGCTTCTTGTCCATGGACCCGTTCATCTTGCTGAAGGCTGGCTT | + |
Preference number: 5 (lower is better) Translates to: LQHGHGGLHILADCR*LLVHGPVHLAEGWL Trigger: AAGCCAGCCTTCAGCAAGATGAACGGGTCCATGGACAAGAAGTCATCTACAGTCAGCGAGGATGTGGAGGCCACCGTGCCCATGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTGGTAGGCAGATCATCTaGTCCTGGGTGACTTGCAGC | + |
Preference number: 5 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSGRQII*SWVTCS Trigger: GCTGCAAGTCACCCAGGACAAGATGATCTGCCTACC...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCTTGTCCTGGGCGTTCTaGGTGAGGCGCTGGCGCAGC | + |
Preference number: 5 (lower is better) Translates to: ASSVKTLIVQILHSETSLLSWAF*VRRWRS Trigger: GCTGCGCCAGCGCCTCACCAAGAACGCCCAGGACAA...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS TCA 90 bp | ACACCGCATCCACGTAGTTGTACTGGTGTCGATCTAGGTCATACTTaGTACCTGTGGGGCCTGTGTCAGGCGTCGGCAGGACTGTGGAGT | + |
Preference number: 5 (lower is better) Translates to: TPHPRSCTGVDLGHT*YLWGLCQASAGLWS Trigger: ACTCCACAGTCCTGCCGACGCCTGACACAGGCCCCACAGGTATCAAGTATGACCTAGATCGACACCAGTACAACTACGTGGATGCGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AAAACTGGGGAGCCTGCCCTCCCAGTGCTGACCTCTCATGCCCAATCTGCCTCTGGTGAGTCGAAGCACTaGAGCAGGATAGACACAAAG | + |
Preference number: 5 (lower is better) Translates to: KTGEPALPVLTSHAQSASGESKH*SRIDTK Trigger: CTTTGTGTCTATCCTGCTCAAGTGCTTCGACTCACC...AGAGGCAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAGGCTCCCCAGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTTCGTTGCAGGAGTCTTaGGTGACCCACTTACAAGGT | + |
Preference number: 5 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSSLQES*VTHLQG Trigger: ACCTTGTAAGTGGGTCACCAAAGACTCCTGCAACGA...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AAAACTGGGGAGCCTGCCCTCCCAGTGCTGACCTCTCATGCCCAATCTGCCTCTTTGAGGACAATGAGCTaGGTGCCCTCATTGTTGATG | + |
Preference number: 5 (lower is better) Translates to: KTGEPALPVLTSHAQSASLRTMS*VPSLLM Trigger: CATCAACAATGAGGGCACCAAGCTCATTGTCCTCAA...AGAGGCAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAGGCTCCCCAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTCTGGTCTCCAGCAAGTGCCTGTCCTGGGTGTCCATGTCCCAGCGGGAGGAAAATCTCCTCAATGGTCTaGAGGTTGTTGTCCTTCAGG | + |
Preference number: 5 (lower is better) Translates to: FWSPASACPGCPCPSGRKISSMV*RLLSFR Trigger: CCTGAAGGACAACAACCTCAAGACCATTGAGGAGAT...TTTCCTCCCGCTGGGACATGGACACCCAGGACAGGCACTTGCTGGAGACCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACTCGATCTGCGTCAGGTaGGTCAGCTCGCCCACTCTC | + |
Preference number: 5 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNSICVR*VSSPTL Trigger: GAGAGTGGGCGAGCTGACCAACCTGACGCAGATCGA...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGAGGCATTCCAGCCGGTaGCCCCGAAGCTCGATCTGC | + |
Preference number: 5 (lower is better) Translates to: PTPQRQEILFNVLLLCSRRHSSR*PRSSIC Trigger: GCAGATCGAGCTTCGGGGCAACCGGCTGGAATGCCT...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACCTTGTCCTGGGTGACTaGCAGCGTCCCTCCAAAGAC | + |
Preference number: 5 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNLVLGD*QRPSKD Trigger: GTCTTTGGAGGGACGCTGCAAGTCACCCAGGACAAG...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GAGGCAGAGATGGCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGGTAGGCAGATCATCTaGTCCTGGGTGACTTGCAGC | + |
Preference number: 5 (lower is better) Translates to: EAEMASSVKTLIVQILHSGRQII*SWVTCS Trigger: GCTGCAAGTCACCCAGGACAAGATGATCTGCCTACC...AGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGCCATCTCTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGCCCCGGAAGGAGTCGTaGCAGGAGTCTTTGGTGACC | + |
Preference number: 5 (lower is better) Translates to: PTPQRQEILFNVLLLCSRPRKES*QESLVT Trigger: GGTCACCAAAGACTCCTGCAACGACTCCTTCCGGGG...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AGCCCAGTGCCAATAAGGCAACTGTCCTACGGCTGGCTCACCCTACCCAACTCTACTGTAGATGACTTCTaGTCCATGGACCCGTTCATC | + |
Preference number: 5 (lower is better) Translates to: SPVPIRQLSYGWLTLPNSTVDDF*SMDPFI Trigger: GATGAACGGGTCCATGGACAAGAAGTCATCTACAGT...AGAGTTGGGTAGGGTGAGCCAGCCGTAGGACAGTTGCCTTATTGGCACTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGTGCTCAATCCGTGACTaGGTCCGCTGCAGCATGGGC | + |
Preference number: 5 (lower is better) Translates to: AHTPKTGNSVQCLAALLKCSIRD*VRCSMG Trigger: GCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCA...CTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCAAGGATGCCAAGATCTaGAAGAGCGTGGCCAGGGGG | + |
Preference number: 5 (lower is better) Translates to: ASSVKTLIVQILHSETSLKDAKI*KSVARG Trigger: CCCCCTGGCCACGCTCTTCAAGATCTTGGCATCCTT...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAAGGCAGCTTGCTCAGGTaGCTCTTGAGTCGCAGCACC | + |
Preference number: 5 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQGSLLR*LLSRST Trigger: GGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCC...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGCAGCTTGCTCAGGTaGCTCTTGAGTCGCAGCACC | + |
Preference number: 5 (lower is better) Translates to: PTPQRQEILFNVLLLCSRGSLLR*LLSRST Trigger: GGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCC...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 90 bp | ATGTGGTTGTACCACAGCTTAAGGCAGGTGAGGCGGTGCAGGTGCTaGAAGCTGATGATCTCCTCAATGGTCTTGAGGTTGTTGTCCTTC | + |
Preference number: 5 (lower is better) Translates to: MWLYHSLRQVRRCRC*KLMISSMVLRLLSF Trigger: GAAGGACAACAACCTCAAGACCATTGAGGAGATCATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCTTAAGCTGTGGTACAACCACAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTTTGCTGAAGGCTGGCTaGGGGTCACTCTCCTCCACC | + |
Preference number: 5 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCLLKAG*GSLSST Trigger: GGTGGAGGAGAGTGACCCCAAGCCAGCCTTCAGCAA...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTTGCTCAATCCGTGACTaGGTCCGCTGCAGCATGGGC | + |
Preference number: 5 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCCSIRD*VRCSMG Trigger: GCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCA...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGTCGAACGAGTACTTCTaGAGGGAGCGCCGCAGCATC | + |
Preference number: 5 (lower is better) Translates to: AHTPKTGNSVQCLAALLKSNEYF*RERRSI Trigger: GATGCTGCGGCGCTCCCTCAAGAAGTACTCGTTCGA...CTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGAAGCGTCCACTCGTTGTaGAGGTTCAGCTGGCGCAGC | + |
Preference number: 5 (lower is better) Translates to: FPRVTSMTRRRKHKWTERSVHSL*RFSWRS Trigger: GCTGCGCCAGCTGAACCTCAACAACGAGTGGACGCT...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAATGGACGGAGAGATTCTCTGCACTCAGGTaGCCCGTCAGGTGCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: FPRVTSMTRRRKHKWTERFSALR*PVRCSS Trigger: GGAGCTGCACCTGACGGGCAACCTGAGTGCAGAGAA...TCTCTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCTTGCTCAGGTTGCTCTaGAGTCGCAGCACCTTGAGG | + |
Preference number: 5 (lower is better) Translates to: ASSVKTLIVQILHSETSLLLRLL*SRSTLR Trigger: CCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAA...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
||
CDS-3UTR CAA 90 bp | AAATACTGCACTCTGAGACTAGTCTCAGAGGTTCTGGTCTCCAGCAAGTGCCTGTTGCTCAGGTTGCTCTaGAGTCGCAGCACCTTGAGG | + |
Preference number: 5 (lower is better) Translates to: KYCTLRLVSEVLVSSKCLLLRLL*SRSTLR Trigger: CCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAA...CAGGCACTTGCTGGAGACCAGAACCTCTGAGACTAGTCTCAGAGTGCAGTATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TACCCAGATCTAAGTTACTGTTCCTGGGCCTCTGGTGCTGGCTCGGCCTCTGAGAGGTTAACCATCTTCTaGAGGCTGTTGAGGACAATG | + |
Preference number: 5 (lower is better) Translates to: YPDLSYCSWASGAGSASERLTIF*RLLRTM Trigger: CATTGTCCTCAACAGCCTCAAGAAGATGGTTAACCT...CTCAGAGGCCGAGCCAGCACCAGAGGCCCAGGAACAGTAACTTAGATCTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACAGCGACTGCAGTACATaGTTGCCCAGGTGTAGAGCC | + |
Preference number: 5 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNSDCST*LPRCRA Trigger: GGCTCTACACCTGGGCAACAATGTACTGCAGTCGCT...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAAAGGCTATCGATCTGCGTCAGGTaGGTCAGCTCGCCCACTCTC | + |
Preference number: 5 (lower is better) Translates to: SLQVRPTCNGLLHGCQRLSICVR*VSSPTL Trigger: GAGAGTGGGCGAGCTGACCAACCTGACGCAGATCGA...TAGCCTTTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAAGGCATTCCAGCCGGTaGCCCCGAAGCTCGATCTGC | + |
Preference number: 5 (lower is better) Translates to: LVCSISKGYIHDTTQKTQRHSSR*PRSSIC Trigger: GCAGATCGAGCTTCGGGGCAACCGGCTGGAATGCCT...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GAACTGAGTCTACAAGTCAGACCCACGTGTAACGGATTGCTTCATGGTTGTCAACTTGTCCTGGGTGACTaGCAGCGTCCCTCCAAAGAC | + |
Preference number: 5 (lower is better) Translates to: ELSLQVRPTCNGLLHGCQLVLGD*QRPSKD Trigger: GTCTTTGGAGGGACGCTGCAAGTCACCCAGGACAAG...TTGACAACCATGAAGCAATCCGTTACACGTGGGTCTGACTTGTAGACTCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GCCTCCAGTGTGAAGACCCTGATTGTCCAAATACTGCACTCTGAGACTAGTCTCCGATCTAGGTCATACTaGATACCTGTGGGGCCTGTG | + |
Preference number: 5 (lower is better) Translates to: ASSVKTLIVQILHSETSLRSRSY*IPVGPV Trigger: CACAGGCCCCACAGGTATCAAGTATGACCTAGATCG...GAGACTAGTCTCAGAGTGCAGTATTTGGACAATCAGGGTCTTCACACTGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTATACAGCCACAGCTCCTaGAGGCCTGTGAGCTGGGCG | + |
Preference number: 5 (lower is better) Translates to: LILSASPKKKKVNTARVLYSHSS*RPVSWA Trigger: CGCCCAGCTCACAGGCCTCAAGGAGCTGTGGCTGTA...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTAAGCACCTTGAGGCGTTaGAGCTCCCGCAGCCCGTCA | + |
Preference number: 5 (lower is better) Translates to: LILSASPKKKKVNTARVLSTLRR*SSRSPS Trigger: TGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCT...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACCTGGTGCGTGGAAACTaGAACCAGAAGTTGCTACAG | + |
Preference number: 5 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNLVRGN*NQKLLQ Trigger: CTGTAGCAACTTCTGGTTCAAGTTTCCACGCACCAG...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | AAATACTGCACTCTGAGACTAGTCTCAGAGGTTCTGGTCTCCAGCAAGTGCCTGGGTGAGTCGAAGCACTaGAGCAGGATAGACACAAAG | + |
Preference number: 5 (lower is better) Translates to: KYCTLRLVSEVLVSSKCLGESKH*SRIDTK Trigger: CTTTGTGTCTATCCTGCTCAAGTGCTTCGACTCACC...CAGGCACTTGCTGGAGACCAGAACCTCTGAGACTAGTCTCAGAGTGCAGTATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGCGAACTTGATCACCTaGATGATGGTCTGCCGCATG | + |
Preference number: 5 (lower is better) Translates to: PTPQRQEILFNVLLLCSRANLIT*MMVCRM Trigger: CATGCGGCAGACCATCATCAAGGTGATCAAGTTCGC...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCACACCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGTTCAGCTGGCGCAGCTaGTTTTCACTCACCTCAGAC | + |
Preference number: 5 (lower is better) Translates to: PTPQRQEILFNVLLLCSRFSWRS*FSLTSD Trigger: GTCTGAGGTGAGTGAAAACAAGCTGCGCCAGCTGAA...CCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGGTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAAAGCTTGGTGCCCTCATaGTTGATGGACAGCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQSLVPS*LMDSFC Trigger: GCAGAAGCTGTCCATCAACAATGAGGGCACCAAGCT...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CCCCAAAGACAGGAAATTCTGTTCAATGTCTTGCTGCTTTGCTCAAGGGGGAAACGATCTAGGTCATACTaGATACCTGTGGGGCCTGTG | + |
Preference number: 5 (lower is better) Translates to: PQRQEILFNVLLLCSRGKRSRSY*IPVGPV Trigger: CACAGGCCCCACAGGTATCAAGTATGACCTAGATCG...TTTCCCCCTTGAGCAAAGCAGCAAGACATTGAACAGAATTTCCTGTCTTTGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | ACGCTAAACTGTACTGTGTGCAAACCAGGTGCCCAGTACAAACTGTCCTGGAACACTGTAGATGACTTCTaGTCCATGGACCCGTTCATC | + |
Preference number: 5 (lower is better) Translates to: TLNCTVCKPGAQYKLSWNTVDDF*SMDPFI Trigger: GATGAACGGGTCCATGGACAAGAAGTCATCTACAGT...GTTCCAGGACAGTTTGTACTGGGCACCTGGTTTGCACACAGTACAGTTTAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTCACAGCGGGATCTCCTaGATGTCCGTGAACTTGATG | + |
Preference number: 5 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCHSGIS*MSVNLM Trigger: CATCAAGTTCACGGACATCAAGGAGATCCCGCTGTG...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTAGCACCTTGAGGCGTTaGAGCTCCCGCAGCCCGTCA | + |
Preference number: 5 (lower is better) Translates to: DIIIKTRDAKTCLSVHVISTLRR*SSRSPS Trigger: TGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCT...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAAGCGCTTCAATCCTATaGGCTGTGACGGCCAGGTTC | + |
Preference number: 5 (lower is better) Translates to: LVCSISKGYIHDTTQKTQSASIL*AVTARF Trigger: GAACCTGGCCGTCACAGCCAATAGGATTGAAGCGCT...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | CTAGTGTGCAGTATTTCCAAGGGTTACATCCATGACACGACGCAGAAAACACAAAGCGACTGCAGTACATaGTTGCCCAGGTGTAGAGCC | + |
Preference number: 5 (lower is better) Translates to: LVCSISKGYIHDTTQKTQSDCST*LPRCRA Trigger: GGCTCTACACCTGGGCAACAATGTACTGCAGTCGCT...TTGTGTTTTCTGCGTCGTGTCATGGATGTAACCCTTGGAAATACTGCACACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTTGCTCCCCTTCCTTCTaGTCCAGTACGCCCGTCTCC | + |
Preference number: 5 (lower is better) Translates to: DIIIKTRDAKTCLSVHVICSPSF*SSTPVS Trigger: GGAGACGGGCGTACTGGACAAGAAGGAAGGGGAGCA...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAAATGATGAGGGCGAACTaGATCACCTTGATGATGGTC | + |
Preference number: 5 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQMMRAN*ITLMMV Trigger: GACCATCATCAAGGTGATCAAGTTCGCCCTCATCAT...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTGTGCAAATCTCCTCAATGGTCTaGAGGTTGTTGTCCTTCAGG | + |
Preference number: 5 (lower is better) Translates to: DLKQSGLPPLDAKLYCVQISSMV*RLLSFR Trigger: CCTGAAGGACAACAACCTCAAGACCATTGAGGAGAT...TTGCACACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTATGATGAGGGCGAACTaGATCACCTTGATGATGGTC | + |
Preference number: 5 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCMMRAN*ITLMMV Trigger: GACCATCATCAAGGTGATCAAGTTCGCCCTCATCAT...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTATTCAGCTGGCGCAGCTaGTTTTCACTCACCTCAGAC | + |
Preference number: 5 (lower is better) Translates to: LILSASPKKKKVNTARVLFSWRS*FSLTSD Trigger: GTCTGAGGTGAGTGAAAACAAGCTGCGCCAGCTGAA...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTACCACCTGCGGCAGCTaGCTCAGGTTGCTCTTGAGT | + |
Preference number: 5 (lower is better) Translates to: DIIIKTRDAKTCLSVHVITTCGS*LRLLLS Trigger: ACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGT...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTAAGCTTGGTGCCCTCATaGTTGATGGACAGCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: LILSASPKKKKVNTARVLSLVPS*LMDSFC Trigger: GCAGAAGCTGTCCATCAACAATGAGGGCACCAAGCT...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GTGATTGATCTAAAGCAGAGTGGCTTACCGCCACTAGACGCTAAACTGTACTGTAGGTTAACCATCTTCTaGAGGCTGTTGAGGACAATG | + |
Preference number: 5 (lower is better) Translates to: VIDLKQSGLPPLDAKLYCRLTIF*RLLRTM Trigger: CATTGTCCTCAACAGCCTCAAGAAGATGGTTAACCT...ACAGTACAGTTTAGCGTCTAGTGGCGGTAAGCCACTCTGCTTTAGATCAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTGCGAACTTGATCACCTaGATGATGGTCTGCCGCATG | + |
Preference number: 5 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIANLIT*MMVCRM Trigger: CATGCGGCAGACCATCATCAAGGTGATCAAGTTCGC...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTCACAGCGGGATCTCCTaGATGTCCGTGAACTTGATG | + |
Preference number: 5 (lower is better) Translates to: DIIIKTRDAKTCLSVHVIHSGIS*MSVNLM Trigger: CATCAAGTTCACGGACATCAAGGAGATCCCGCTGTG...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | GACATAATCATTAAGACAAGAGACGCTAAAACGTGCCTTAGTGTCCATGTGATTCTGGTGCGTGGAAACTaGAACCAGAAGTTGCTACAG | + |
Preference number: 5 (lower is better) Translates to: DIIIKTRDAKTCLSVHVILVRGN*NQKLLQ Trigger: CTGTAGCAACTTCTGGTTCAAGTTTCCACGCACCAG...AATCACATGGACACTAAGGCACGTTTTAGCGTCTCTTGTCTTAATGATTATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS-3UTR CAA 90 bp | TTGATTCTGTCAGCATCACCTAAAAAGAAAAAGGTGAACACTGCCAGGGTGCTATCAATGGTCTTGAGGTaGTTGTCCTTCAGGTCAATC | + |
Preference number: 5 (lower is better) Translates to: LILSASPKKKKVNTARVLSMVLR*LSFRSI Trigger: GATTGACCTGAAGGACAACAACCTCAAGACCATTGA...TAGCACCCTGGCAGTGTTCACCTTTTTCTTTTTAGGTGATGCTGACAGAATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 72 bp | GGCAGGCATTCCAGCCGGTTGCCCCGAAGCTCGATCTaGGTCAGGTTGGTCAGCTCGCCCACTCTCGAGGGC | + |
Preference number: 6 (lower is better) Translates to: GRHSSRLPRSSI*VRLVSSPTLEG Trigger: GCCCTCGAGAGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTTCGGGGCAACCGGCTGGAATGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 72 bp | CCAGCCGGTTGCCCCGAAGCTCGATCTGCGTCAGGTTaGTCAGCTCGCCCACTCTCGAGGGCAGCGACTGCA | + |
Preference number: 6 (lower is better) Translates to: PAGCPEARSASG*SARPLSRAATA Trigger: TGCAGTCGCTGCCCTCGAGAGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTTCGGGGCAACCGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | TCCAGCCGGTTGCCCCGAAGCTCGATCTGCGTCAGGTaGGTCAGCTCGCCCACTCTCGAGGGCAGCGACTGC | + |
Preference number: 6 (lower is better) Translates to: SSRLPRSSICVR*VSSPTLEGSDC Trigger: GCAGTCGCTGCCCTCGAGAGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTTCGGGGCAACCGGCTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | ACGCCCGTCTCCGATCGGTCCACGATGCCCTGCTCAATCCGTGACTaGGTCCGCTGCAGCATGGGCACGGTGGCCTCCACATCCTCGCTG | + |
Preference number: 6 (lower is better) Translates to: TPVSDRSTMPCSIRD*VRCSMGTVASTSSL Trigger: CAGCGAGGATGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGAGACGGGCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | GCAGGAGCCTCGATCTTGGCTGCCGTGTGGTACAGCCACAGCTCCTaGAGGCCTGTGAGCTGGGCGATGCTGGGCGGGATGGTCACGTCG | + |
Preference number: 6 (lower is better) Translates to: AGASILAAVWYSHSS*RPVSWAMLGGMVTS Trigger: CGACGTGACCATCCCGCCCAGCATCGCCCAGCTCACAGGCCTCAAGGAGCTGTGGCTGTACCACACGGCAGCCAAGATCGAGGCTCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS TCA 72 bp | CGTCTCCGATCGGTCCACGATGCCCTGCTCAATCCGTaGCTTGGTCCGCTGCAGCATGGGCACGGTGGCCTC | + |
Preference number: 6 (lower is better) Translates to: RLRSVHDALLNP*LGPLQHGHGGL Trigger: GAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGAGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 72 bp | TCCAGTACGCCCGTCTCCGATCGGTCCACGATGCCCTaGTCAATCCGTGACTTGGTCCGCTGCAGCATGGGC | + |
Preference number: 6 (lower is better) Translates to: SSTPVSDRSTMP*SIRDLVRCSMG Trigger: GCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGAGACGGGCGTACTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 72 bp | CCGATCGGTCCACGATGCCCTGCTCAATCCGTGACTTaGTCCGCTGCAGCATGGGCACGGTGGCCTCCACAT | + |
Preference number: 6 (lower is better) Translates to: PIGPRCPAQSVT*SAAAWARWPPH Trigger: ATGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 72 bp | GTGTGGTACAGCCACAGCTCCTTGAGGCCTGTGAGCTaGGCGATGCTGGGCGGGATGGTCACGTCGGGTATC | + |
Preference number: 6 (lower is better) Translates to: VWYSHSSLRPVS*AMLGGMVTSGI Trigger: GATACCCGACGTGACCATCCCGCCCAGCATCGCCCAGCTCACAGGCCTCAAGGAGCTGTGGCTGTACCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 72 bp | AAGGCCAGGGCAGGAGCCTCGATCTTGGCTGCCGTGTaGTACAGCCACAGCTCCTTGAGGCCTGTGAGCTGG | + |
Preference number: 6 (lower is better) Translates to: KARAGASILAAV*YSHSSLRPVSW Trigger: CCAGCTCACAGGCCTCAAGGAGCTGTGGCTGTACCACACGGCAGCCAAGATCGAGGCTCCTGCCCTGGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | TCCGATCGGTCCACGATGCCCTGCTCAATCCGTGACTaGGTCCGCTGCAGCATGGGCACGGTGGCCTCCACA | + |
Preference number: 6 (lower is better) Translates to: SDRSTMPCSIRD*VRCSMGTVAST Trigger: TGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | TCGATCTTGGCTGCCGTGTGGTACAGCCACAGCTCCTaGAGGCCTGTGAGCTGGGCGATGCTGGGCGGGATG | + |
Preference number: 6 (lower is better) Translates to: SILAAVWYSHSS*RPVSWAMLGGM Trigger: CATCCCGCCCAGCATCGCCCAGCTCACAGGCCTCAAGGAGCTGTGGCTGTACCACACGGCAGCCAAGATCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | TTCTCCCGCAGGAAGGCCAGGGCAGGAGCCTCGATCTaGGCTGCCGTGTGGTACAGCCACAGCTCCTTGAGG | + |
Preference number: 6 (lower is better) Translates to: FSRRKARAGASI*AAVWYSHSSLR Trigger: CCTCAAGGAGCTGTGGCTGTACCACACGGCAGCCAAGATCGAGGCTCCTGCCCTGGCCTTCCTGCGGGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | ACGCCCACATCCGTGACCACCTGCGGCAGCTTGCTCAGGTTGCTCTaGAGTCGCAGCACCTTGAGGCGTTTGAGCTCCCGCAGCCCGTCA | + |
Preference number: 6 (lower is better) Translates to: TPTSVTTCGSLLRLL*SRSTLRRLSSRSPS Trigger: TGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGTGGGCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | AGGTGCACGCCCACATCCGTGACCACCTGCGGCAGCTTGCTCAGGTaGCTCTTGAGTCGCAGCACCTTGAGGCGTTTGAGCTCCCGCAGC | + |
Preference number: 6 (lower is better) Translates to: RCTPTSVTTCGSLLR*LLSRSTLRRLSSRS Trigger: GCTGCGGGAGCTCAAACGCCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGTGGGCGTGCACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | GGCAGGCATTCCAGCCGGTTGCCCCGAAGCTCGATCTGCGTCAGGTaGGTCAGCTCGCCCACTCTCGAGGGCAGCGACTGCAGTACATTG | + |
Preference number: 6 (lower is better) Translates to: GRHSSRLPRSSICVR*VSSPTLEGSDCSTL Trigger: CAATGTACTGCAGTCGCTGCCCTCGAGAGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTTCGGGGCAACCGGCTGGAATGCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 72 bp | AGCTCCAGCTTGTCCTGGGCGTTCTTGGTGAGGCGCTaGCGCAGCTTGTCCAGCGTCCACTCGTTGTTGAGG | + |
Preference number: 6 (lower is better) Translates to: SSSLSWAFLVRR*RSLSSVHSLLR Trigger: CCTCAACAACGAGTGGACGCTGGACAAGCTGCGCCAGCGCCTCACCAAGAACGCCCAGGACAAGCTGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | TCCGTGACCACCTGCGGCAGCTTGCTCAGGTTGCTCTaGAGTCGCAGCACCTTGAGGCGTTTGAGCTCCCGC | + |
Preference number: 6 (lower is better) Translates to: SVTTCGSLLRLL*SRSTLRRLSSR Trigger: GCGGGAGCTCAAACGCCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGTCACGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | AGGTGCACGCCCACATCCGTGACCACCTGCGGCAGCTaGCTCAGGTTGCTCTTGAGTCGCAGCACCTTGAGG | + |
Preference number: 6 (lower is better) Translates to: RCTPTSVTTCGS*LRLLLSRSTLR Trigger: CCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGTGGGCGTGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | AGCTTCTGCAGGTGCACGCCCACATCCGTGACCACCTGCGGCAGCTaGCTCAGGTTGCTCTTGAGTCGCAGCACCTTGAGGCGTTTGAGC | + |
Preference number: 6 (lower is better) Translates to: SFCRCTPTSVTTCGS*LRLLLSRSTLRRLS Trigger: GCTCAAACGCCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGTGGGCGTGCACCTGCAGAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 72 bp | TCTTGTCCAGTACGCCCGTCTCCGATCGGTCCACGATaGCCTGCTCAATCCGTGACTTGGTCCGCTGCAGCA | + |
Preference number: 6 (lower is better) Translates to: SCPVRPSPIGPR*PAQSVTWSAAA Trigger: TGCTGCAGCGGACCAAGTCACGGATTGAGCAGGGCATCGTGGACCGATCGGAGACGGGCGTACTGGACAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 72 bp | ATCCTATTGGCTGTGACGGCCAGGTTCTGGAGGTTCTaGAGGAGGCCAATGTCGGCGGGGAGGAAGGTCAGG | + |
Preference number: 6 (lower is better) Translates to: ILLAVTARFWRF*RRPMSAGRKVR Trigger: CCTGACCTTCCTCCCCGCCGACATTGGCCTCCTGCAGAACCTCCAGAACCTGGCCGTCACAGCCAATAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | TCTGGGCTGGAGGCTGCCCAGCCCCGGAAGGAGTCGTaGCAGGAGTCTTTGGTGACCCACTTACAAGGTAGG | + |
Preference number: 6 (lower is better) Translates to: SGLEAAQPRKES*QESLVTHLQGR Trigger: CCTACCTTGTAAGTGGGTCACCAAAGACTCCTGCAACGACTCCTTCCGGGGCTGGGCAGCCTCCAGCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | GGCAGCTTGCTCAGGTTGCTCTTGAGTCGCAGCACCTaGAGGCGTTTGAGCTCCCGCAGCCCGTCAATGACG | + |
Preference number: 6 (lower is better) Translates to: GSLLRLLLSRST*RRLSSRSPSMT Trigger: CGTCATTGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | CCCACATCCGTGACCACCTGCGGCAGCTTGCTCAGGTaGCTCTTGAGTCGCAGCACCTTGAGGCGTTTGAGC | + |
Preference number: 6 (lower is better) Translates to: PTSVTTCGSLLR*LLSRSTLRRLS Trigger: GCTCAAACGCCTCAAGGTGCTGCGACTCAAGAGCAACCTGAGCAAGCTGCCGCAGGTGGTCACGGATGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | AGCTCGCCCACTCTCGAGGGCAGCGACTGCAGTACATaGTTGCCCAGGTGTAGAGCCCGTAGCTTCCGACAC | + |
Preference number: 6 (lower is better) Translates to: SSPTLEGSDCST*LPRCRARSFRH Trigger: GTGTCGGAAGCTACGGGCTCTACACCTGGGCAACAATGTACTGCAGTCGCTGCCCTCGAGAGTGGGCGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | AGGTTGGTCAGCTCGCCCACTCTCGAGGGCAGCGACTGCAGTACATaGTTGCCCAGGTGTAGAGCCCGTAGCTTCCGACACTGGAAGAGC | + |
Preference number: 6 (lower is better) Translates to: RLVSSPTLEGSDCST*LPRCRARSFRHWKS Trigger: GCTCTTCCAGTGTCGGAAGCTACGGGCTCTACACCTGGGCAACAATGTACTGCAGTCGCTGCCCTCGAGAGTGGGCGAGCTGACCAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS TCA 72 bp | CAATGTCGGCGGGGAGGAAGGTCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCTTGCGGCAGTAGAAGA | + |
Preference number: 6 (lower is better) Translates to: QCRRGGRSGCCG*GPGSAACGSRR Trigger: TCTTCTACTGCCGCAAGCTGCGCTACCTGGACCTCAGCCACAACAACCTGACCTTCCTCCCCGCCGACATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 72 bp | TTGGTGCCCTCATTGTTGATGGACAGCTTCTGCAGGTaGACGCCCACATCCGTGACCACCTGCGGCAGCTTG | + |
Preference number: 6 (lower is better) Translates to: LVPSLLMDSFCR*TPTSVTTCGSL Trigger: CAAGCTGCCGCAGGTGGTCACGGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | GATGACTTCTTGTCCATGGACCCGTTCATCTTGCTGAAGGCTGGCTaGGGGTCACTCTCCTCCACCACTGTCTCCGACAGGGCCCGTGTG | + |
Preference number: 6 (lower is better) Translates to: DDFLSMDPFILLKAG*GSLSSTTVSDRARV Trigger: CACACGGGCCCTGTCGGAGACAGTGGTGGAGGAGAGTGACCCCAAGCCAGCCTTCAGCAAGATGAACGGGTCCATGGACAAGAAGTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | TTGGTCAGCTCGCCCACTCTCGAGGGCAGCGACTGCAGTACATTGTaGCCCAGGTGTAGAGCCCGTAGCTTCCGACACTGGAAGAGCTCT | + |
Preference number: 6 (lower is better) Translates to: LVSSPTLEGSDCSTL*PRCRARSFRHWKSS Trigger: AGAGCTCTTCCAGTGTCGGAAGCTACGGGCTCTACACCTGGGCAACAATGTACTGCAGTCGCTGCCCTCGAGAGTGGGCGAGCTGACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | TTGTCCATGGACCCGTTCATCTTGCTGAAGGCTGGCTaGGGGTCACTCTCCTCCACCACTGTCTCCGACAGG | + |
Preference number: 6 (lower is better) Translates to: LSMDPFILLKAG*GSLSSTTVSDR Trigger: CCTGTCGGAGACAGTGGTGGAGGAGAGTGACCCCAAGCCAGCCTTCAGCAAGATGAACGGGTCCATGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | ATGGGCACGGTGGCCTCCACATCCTCGCTGACTGTAGATGACTTCTaGTCCATGGACCCGTTCATCTTGCTGAAGGCTGGCTTGGGGTCA | + |
Preference number: 6 (lower is better) Translates to: MGTVASTSSLTVDDF*SMDPFILLKAGLGS Trigger: TGACCCCAAGCCAGCCTTCAGCAAGATGAACGGGTCCATGGACAAGAAGTCATCTACAGTCAGCGAGGATGTGGAGGCCACCGTGCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 72 bp | CTTCTTGTCCATGGACCCGTTCATCTTGCTGAAGGCTaGCTTGGGGTCACTCTCCTCCACCACTGTCTCCGA | + |
Preference number: 6 (lower is better) Translates to: LLVHGPVHLAEG*LGVTLLHHCLR Trigger: TCGGAGACAGTGGTGGAGGAGAGTGACCCCAAGCCAGCCTTCAGCAAGATGAACGGGTCCATGGACAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | TCCTCGCTGACTGTAGATGACTTCTTGTCCATGGACCCGTTCATCTaGCTGAAGGCTGGCTTGGGGTCACTCTCCTCCACCACTGTCTCC | + |
Preference number: 6 (lower is better) Translates to: SSLTVDDFLSMDPFI*LKAGLGSLSSTTVS Trigger: GGAGACAGTGGTGGAGGAGAGTGACCCCAAGCCAGCCTTCAGCAAGATGAACGGGTCCATGGACAAGAAGTCATCTACAGTCAGCGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS TCA 72 bp | CCACGTAGTTGTACTGGTGTCGATCTAGGTCATACTTaGTACCTGTGGGGCCTGTGTCAGGCGTCGGCAGGA | + |
Preference number: 6 (lower is better) Translates to: PRSCTGVDLGHT*YLWGLCQASAG Trigger: TCCTGCCGACGCCTGACACAGGCCCCACAGGTATCAAGTATGACCTAGATCGACACCAGTACAACTACGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS TCA 72 bp | GGGCACGGTGGCCTCCACATCCTCGCTGACTGTAGATaGCTTCTTGTCCATGGACCCGTTCATCTTGCTGAA | + |
Preference number: 6 (lower is better) Translates to: GHGGLHILADCR*LLVHGPVHLAE Trigger: TTCAGCAAGATGAACGGGTCCATGGACAAGAAGTCATCTACAGTCAGCGAGGATGTGGAGGCCACCGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | GTGGCCTCCACATCCTCGCTGACTGTAGATGACTTCTaGTCCATGGACCCGTTCATCTTGCTGAAGGCTGGC | + |
Preference number: 6 (lower is better) Translates to: VASTSSLTVDDF*SMDPFILLKAG Trigger: GCCAGCCTTCAGCAAGATGAACGGGTCCATGGACAAGAAGTCATCTACAGTCAGCGAGGATGTGGAGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS GCA 72 bp | ATGATGAGGGCGAACTTGATCACCTTGATGATGGTCTaGCGCATGTACAGGCGGTACACAATGTCCCCCTCC | + |
Preference number: 6 (lower is better) Translates to: MMRANLITLMMV*RMYRRYTMSPS Trigger: GGAGGGGGACATTGTGTACCGCCTGTACATGCGGCAGACCATCATCAAGGTGATCAAGTTCGCCCTCATCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CCA 72 bp | TACCACAGCTTAAGGCAGGTGAGGCGGTGCAGGTGCTaGAAGCTGATGATCTCCTCAATGGTCTTGAGGTTG | + |
Preference number: 6 (lower is better) Translates to: YHSLRQVRRCRC*KLMISSMVLRL Trigger: CAACCTCAAGACCATTGAGGAGATCATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCTTAAGCTGTGGTA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | ACTGTAGATGACTTCTTGTCCATGGACCCGTTCATCTaGCTGAAGGCTGGCTTGGGGTCACTCTCCTCCACC | + |
Preference number: 6 (lower is better) Translates to: TVDDFLSMDPFI*LKAGLGSLSST Trigger: GGTGGAGGAGAGTGACCCCAAGCCAGCCTTCAGCAAGATGAACGGGTCCATGGACAAGAAGTCATCTACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | TCTTTGGTGACCCACTTACAAGGTAGGCAGATCATCTaGTCCTGGGTGACTTGCAGCGTCCCTCCAAAGACA | + |
Preference number: 6 (lower is better) Translates to: SLVTHLQGRQII*SWVTCSVPPKT Trigger: TGTCTTTGGAGGGACGCTGCAAGTCACCCAGGACAAGATGATCTGCCTACCTTGTAAGTGGGTCACCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 90 bp | AGGATAGACACAAAGTGTTCCAGCTTCGAACTGGTGCGTGGAAACTaGAACCAGAAGTTGCTACAGGCCAGGAAGATGAGGGTGTGCAGA | + |
Preference number: 6 (lower is better) Translates to: RIDTKCSSFELVRGN*NQKLLQARKMRVCR Trigger: TCTGCACACCCTCATCTTCCTGGCCTGTAGCAACTTCTGGTTCAAGTTTCCACGCACCAGTTCGAAGCTGGAACACTTTGTGTCTATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |
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CDS CAA 72 bp | ACAAAGTGTTCCAGCTTCGAACTGGTGCGTGGAAACTaGAACCAGAAGTTGCTACAGGCCAGGAAGATGAGG | + |
Preference number: 6 (lower is better) Translates to: TKCSSFELVRGN*NQKLLQARKMR Trigger: CCTCATCTTCCTGGCCTGTAGCAACTTCTGGTTCAAGTTTCCACGCACCAGTTCGAAGCTGGAACACTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095078.3 ENSMUST00000113654.8 |