Pregenerated sensors for LRRC75B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046807Ensembl transcript IDs: ENSMUST00000051129.10, ENSMUST00000220172.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCCTCACCCGGCCAAGATACTCACTCGGCCTACACAGGGAGGGTaGGAACTAGAGCTGGGGAGAGTGGCCAGTGCTGTGTCCTATGGG | + |
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Preference number: 1 (lower is better) Translates to: SPHPAKILTRPTQGG*ELELGRVASAVSYG Trigger: CCCATAGGACACAGCACTGGCCACTCTCCCCAGCTCTAGTTCCCACCCTCCCTGTGTAGGCCGAGTGAGTATCTTGGCCGGGTGAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR TCA 90 bp | CGACAGCAGCGGTGGTGGCGATCCGAGGCCCTCTCCCAGGACGAGTaGGCTTTCCTTTTCACCCAGAGAAAACCTTGGTGCATCAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: RQQRWWRSEALSQDE*AFLFTQRKPWCIRN Trigger: GTTCCTGATGCACCAAGGTTTTCTCTGGGTGAAAAGGAAAGCTCACTCGTCCTGGGAGAGGGCCTCGGATCGCCACCACCGCTGCTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR TCA 90 bp | CCACGCTTCCTTCTTCCTTCCTGGTCAGTGCTGTCTTCTCCACCCTaGGTGCCGCCTACTCAGAGCACATGCATGGGAAACCCAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PRFLLPSWSVLSSPP*VPPTQSTCMGNPAG Trigger: ACCTGCTGGGTTTCCCATGCATGTGCTCTGAGTAGGCGGCACTCAGGGTGGAGAAGACAGCACTGACCAGGAAGGAAGAAGGAAGCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR GCA 90 bp | GCCTACACAGGGAGGGTGGGAACTAGAGCTGGGGAGAGTGGCCAGTaGTGTGTCCTATGGGAGACAAACACACAGTCAACTGTCCCACCT | + |
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Preference number: 1 (lower is better) Translates to: AYTGRVGTRAGESGQ*CVLWETNTQSTVPP Trigger: AGGTGGGACAGTTGACTGTGTGTTTGTCTCCCATAGGACACAGCACTGGCCACTCTCCCCAGCTCTAGTTCCCACCCTCCCTGTGTAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CCA 90 bp | GGTGACCCCAGCCTTTACCTTGACCCTGAGGCTGCCCTCTGTTCCTaGGTCTCTCCACTGTCACCAGGCCATAAGTCTTGTCTCTACCCT | + |
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Preference number: 1 (lower is better) Translates to: GDPSLYLDPEAALCS*VSPLSPGHKSCLYP Trigger: AGGGTAGAGACAAGACTTATGGCCTGGTGACAGTGGAGAGACCCAGGAACAGAGGGCAGCCTCAGGGTCAAGGTAAAGGCTGGGGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CCA 90 bp | TGCTGTCTTCTCCACCCTGAGTGCCGCCTACTCAGAGCACATGCATaGGAAACCCAGCAGGTCTGCCGTTTAAAGGGTGATTGGGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: CCLLHPECRLLRAHA*ETQQVCRLKGDWVS Trigger: GCTGACCCAATCACCCTTTAAACGGCAGACCTGCTGGGTTTCCCATGCATGTGCTCTGAGTAGGCGGCACTCAGGGTGGAGAAGACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CCA 90 bp | CTGCCTAAGCATGTGTTGGGGTTATCAGTCCGCTGGGCCCAAAGCTaGCTCTCCCTTCCTTCTTTCTGCTGGCCCATACTCCATCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: LPKHVLGLSVRWAQS*LSLPSFCWPILHLA Trigger: AGCAAGATGGAGTATGGGCCAGCAGAAAGAAGGAAGGGAGAGCCAGCTTTGGGCCCAGCGGACTGATAACCCCAACACATGCTTAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CCA 90 bp | CTGCCATCTGGATTTGCCTGGAAACTGCCCAGGAACCCCCGGCTCTaGTCCTCACACACTATCCTAGGAAGAACCTTGCTGCACTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: LPSGFAWKLPRNPRL*SSHTILGRTLLHCD Trigger: ATCACAGTGCAGCAAGGTTCTTCCTAGGATAGTGTGTGAGGACCAGAGCCGGGGGTTCCTGGGCAGTTTCCAGGCAAATCCAGATGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR TCA 90 bp | GGCATTTGCTCTCAGGCTCCGTGCAGAGCTTTGCCTATCTGTCTGTaGCTCCCAACCTTCTCCCCTGAAGCTCCCAACTGCTTAGAACTC | + |
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Preference number: 1 (lower is better) Translates to: GICSQAPCRALPICL*LPTFSPEAPNCLEL Trigger: GAGTTCTAAGCAGTTGGGAGCTTCAGGGGAGAAGGTTGGGAGTCACAGACAGATAGGCAAAGCTCTGCACGGAGCCTGAGAGCAAATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR GCA 90 bp | AGCCCAGGTGAAGGACTCACCAACAGACACTGCATCATGCTGGCTTaGCCCAGTCCTGTGACAGCCTCTTTTCAAACCTCATCTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: SPGEGLTNRHCIMLA*PSPVTASFQTSSPP Trigger: AGGAGGAGATGAGGTTTGAAAAGAGGCTGTCACAGGACTGGGGCAAGCCAGCATGATGCAGTGTCTGTTGGTGAGTCCTTCACCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CCA 90 bp | TCCAGCAAGGAGTTACAGAGAGAACTCAGCTGCCTAAGCATGTGTTaGGGTTATCAGTCCGCTGGGCCCAAAGCTGGCTCTCCCTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SSKELQRELSCLSMC*GYQSAGPKAGSPFL Trigger: AAGGAAGGGAGAGCCAGCTTTGGGCCCAGCGGACTGATAACCCCAACACATGCTTAGGCAGCTGAGTTCTCTCTGTAACTCCTTGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR GCA 90 bp | CTGTCACCAGGCCATAAGTCTTGTCTCTACCCTGCTTCCCTACTTTaGTCTTCTCTGAGTCCCTTCCTCACGTGCCCTGCCTGTCTAACA | + |
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Preference number: 1 (lower is better) Translates to: LSPGHKSCLYPASLL*SSLSPFLTCPACLT Trigger: TGTTAGACAGGCAGGGCACGTGAGGAAGGGACTCAGAGAAGAGCAAAGTAGGGAAGCAGGGTAGAGACAAGACTTATGGCCTGGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR TCA 90 bp | GACTCACCAACAGACACTGCATCATGCTGGCTTGCCCCAGTCCTGTaGCAGCCTCTTTTCAAACCTCATCTCCTCCTCACTTCAACAGGA | + |
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Preference number: 1 (lower is better) Translates to: DSPTDTASCWLAPVL*QPLFKPHLLLTSTG Trigger: TCCTGTTGAAGTGAGGAGGAGATGAGGTTTGAAAAGAGGCTGTCACAGGACTGGGGCAAGCCAGCATGATGCAGTGTCTGTTGGTGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CCA 90 bp | CACAGGCCTGTCATCCTAGCACTCATAAGACAGAGGCAGGGGGATTaGAAGTTTGAGCCCAGTGTAGGCTACACCATAAGACTGGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: HRPVILALIRQRQGD*KFEPSVGYTIRLAK Trigger: CTTAGCCAGTCTTATGGTGTAGCCTACACTGGGCTCAAACTTCCAATCCCCCTGCCTCTGTCTTATGAGTGCTAGGATGACAGGCCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR TCA 90 bp | CACAGTGTCTTGATAAGCAGTTGTCTAAAGTGGCCGGGCATGAGGTaGAATGCTTTTCCTCAGCTGTCTCCTTTCCCAAGCCTGGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: HSVLISSCLKWPGMR*NAFPQLSPFPSLGA Trigger: AGCTCCCAGGCTTGGGAAAGGAGACAGCTGAGGAAAAGCATTTCACCTCATGCCCGGCCACTTTAGACAACTGCTTATCAAGACACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR TCA 90 bp | GCTCTGGTCCTCACACACTATCCTAGGAAGAACCTTGCTGCACTGTaGTACCTAAAGGTTTGTGGGCAGAGAATAAGAGGGGCAGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: ALVLTHYPRKNLAAL*YLKVCGQRIRGAGE Trigger: CTCTCCTGCCCCTCTTATTCTCTGCCCACAAACCTTTAGGTATCACAGTGCAGCAAGGTTCTTCCTAGGATAGTGTGTGAGGACCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CCA 90 bp | GGCCAGGACCACTTACTTGCACAGCAGCAAAGTCAACTTTGTCTCTaGTCTCCTAAACTGTCTCAGGATCTGGCTCAGCTACTGCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: GQDHLLAQQQSQLCL*SPKLSQDLAQLLLF Trigger: AAAAAGCAGTAGCTGAGCCAGATCCTGAGACAGTTTAGGAGACCAGAGACAAAGTTGACTTTGCTGCTGTGCAAGTAAGTGGTCCTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR GCA 90 bp | AACTTGTCACAGTGTGTTTGCTTTATTATGTTGCAATGTCACGGATaGTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NLSQCVCFIMLQCHG*LLHSQDWLTGMCHH Trigger: GTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAACATAATAAAGCAAACACACTGTGACAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
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| 3UTR CAA 90 bp | CTATCCTTTCCTGGAAGGTCTGGGCCATGGGCGCTGAGGCACCTCTaGCTGGGCAAGATGGAGCCCCTAGTCTGGGCCGCCTGGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSFPGRSGPWALRHL*LGKMEPLVWAAWPA Trigger: GGCAGGCCAGGCGGCCCAGACTAGGGGCTCCATCTTGCCCAGCAAGAGGTGCCTCAGCGCCCATGGCCCAGACCTTCCAGGAAAGGATAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CAA 90 bp | GGTGGGCCAAAGGCACTCAGGTCCGGGGTGACCCCAGCCTTTACCTaGACCCTGAGGCTGCCCTCTGTTCCTGGGTCTCTCCACTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: GGPKALRSGVTPAFT*TLRLPSVPGSLHCH Trigger: GTGACAGTGGAGAGACCCAGGAACAGAGGGCAGCCTCAGGGTCAAGGTAAAGGCTGGGGTCACCCCGGACCTGAGTGCCTTTGGCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGGGTGATTGGGTCAGCGGGGCTCTCTCTCCCCGGGTGCGCGGAAGTCCTCCCAAGCCTGGGAGCTaGTGCAGTGTAGCCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LKGDWVSGALSPRVRGSPPKPGS*CSVASC Trigger: GCAGCTGGCTACACTGCATCAGCTCCCAGGCTTGGG...AGGACTTCCGCGCACCCGGGGAGAGAGAGCCCCGCTGACCCAATCACCCTTTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCCACCCTGAGTGCCGCCTACTCAGAGCACATGCATGGGAAACCCAGCAGCTCTCTCTCCCCGGGTaGGCGGAAGTCCTGACTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLHPECRLLRAHAWETQQLSLPG*AEVLTA Trigger: GGCAGTCAGGACTTCCGCGCACCCGGGGAGAGAGAG...CTGCTGGGTTTCCCATGCATGTGCTCTGAGTAGGCGGCACTCAGGGTGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAGCGGTGGTGGCGATCCGAGGCCCTCTCCCAGGACGAGTGAGCTTTCCTCTGGCCTGCCTGCCATaGAACCTTTCTCCTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: TAAVVAIRGPLPGRVSFPLACLP*NLSPST Trigger: AGTGGAAGGAGAAAGGTTTCATGGCAGGCAGGCCAG...AGGAAAGCTCACTCGTCCTGGGAGAGGGCCTCGGATCGCCACCACCGCTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAGCGGTGGTGGCGATCCGAGGCCCTCTCCCAGGACGAGTGAGCTTTCCTCACAGAAAGCCCAGGTaGAGGACTCACCAACAGACA | + |
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Preference number: 2 (lower is better) Translates to: TAAVVAIRGPLPGRVSFPHRKPR*RTHQQT Trigger: TGTCTGTTGGTGAGTCCTTCACCTGGGCTTTCTGTG...AGGAAAGCTCACTCGTCCTGGGAGAGGGCCTCGGATCGCCACCACCGCTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR CCA 90 bp | TCCACCGTGGCCTTGCCTTCGGTGTGTAGAGCCTTGTCCCCAGCCCAGTGCACAGATGCTATCCTTTCCTaGAAGGTCTGGGCCATGGGC | + |
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Preference number: 2 (lower is better) Translates to: STVALPSVCRALSPAQCTDAILS*KVWAMG Trigger: GCCCATGGCCCAGACCTTCCAGGAAAGGATAGCATC...TGTGCACTGGGCTGGGGACAAGGCTCTACACACCGAAGGCAAGGCCACGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGGGTGATTGGGTCAGCGGGGCTCTCTCTCCCCGGGTGCGCGGAAGTCCTCAGAGAGGGGGAAGGTaGGTCCAAAGAGATGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LKGDWVSGALSPRVRGSPQRGGR*VQRDGG Trigger: TCCTCCATCTCTTTGGACCCACCTTCCCCCTCTCTG...AGGACTTCCGCGCACCCGGGGAGAGAGAGCCCCGCTGACCCAATCACCCTTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGCGGTGGTGGCGATCCGAGGCCCTCTCCCAGGACGAGTGAGCTTTCCTCAGTGCTGTGTCCTATaGGAGACAAACACACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: TAAVVAIRGPLPGRVSFPQCCVL*ETNTQS Trigger: TGACTGTGTGTTTGTCTCCCATAGGACACAGCACTG...AGGAAAGCTCACTCGTCCTGGGAGAGGGCCTCGGATCGCCACCACCGCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CAA 90 bp | GCCTCCTTGGGCACACTGGGCTGGGGACATGCTGCCATTGATGTTTaGTGGGGGCCTGGATGTACTGTCCATAGCCCACTTGGAGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: ASLGTLGWGHAAIDV*WGPGCTVHSPLGVR Trigger: TCTAACTCCAAGTGGGCTATGGACAGTACATCCAGGCCCCCACAAAACATCAATGGCAGCATGTCCCCAGCCCAGTGTGCCCAAGGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | TCCACCGTGGCCTTGCCTTCGGTGTGTAGAGCCTTGTCCCCAGCCCAGTGCACAACACCACTGAACCCATaGCCTCTACATCTTGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: STVALPSVCRALSPAQCTTPLNP*PLHLVS Trigger: GGAAACAAGATGTAGAGGTCATGGGTTCAGTGGTGT...TGTGCACTGGGCTGGGGACAAGGCTCTACACACCGAAGGCAAGGCCACGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR GCA 90 bp | GACCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCGGGGAGAGTGGCCAGTaGTGTGTCCTATGGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: DQRCFNASRLGPHHASFFGESGQ*CVLWET Trigger: TGTCTCCCATAGGACACAGCACTGGCCACTCTCCCC...GAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCCACCCTGAGTGCCGCCTACTCAGAGCACATGCATGGGAAACCCAGCAGGCTGCCATCTGGATTTaGCTGGAAACTGCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LLHPECRLLRAHAWETQQAAIWI*LETAQE Trigger: TTCCTGGGCAGTTTCCAGGCAAATCCAGATGGCAGC...CTGCTGGGTTTCCCATGCATGTGCTCTGAGTAGGCGGCACTCAGGGTGGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CAA 90 bp | GTCCAGCAAGGAGTTACAGAGAGAACTCAGCTGCCTAAGCATGTGTaGGGGTTATCAGTCCGCTGGGCCCAAAGCTGGCTCTCCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VQQGVTERTQLPKHV*GLSVRWAQSWLSLP Trigger: AGGAAGGGAGAGCCAGCTTTGGGCCCAGCGGACTGATAACCCCAACACATGCTTAGGCAGCTGAGTTCTCTCTGTAACTCCTTGCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTTTTTCACTGTCTCTCTaGGGGACACACGTGGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPFSLSL*GTHVGL Trigger: GAGGCCCACGTGTGTCCCTCAGAGAGACAGTGAAAA...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCGGGCATGAGGTGAAATGCTTTTCCTCAGCTGTCTCCTTTCCCAAGCCTCTGAGCCCACACCACTaGACCCATGACCTCTACATC | + |
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Preference number: 2 (lower is better) Translates to: VAGHEVKCFSSAVSFPKPLSPHH*THDLYI Trigger: GATGTAGAGGTCATGGGTTCAGTGGTGTGGGCTCAG...AGGCTTGGGAAAGGAGACAGCTGAGGAAAAGCATTTCACCTCATGCCCGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CAA 90 bp | CCTCTCCCAGGACGAGTGAGCTTTCCTTTTCACCCAGAGAAAACCTaGGTGCATCAGGAACCAGCTGCCCACGATTCTGGGTTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PLPGRVSFPFHPEKT*VHQEPAAHDSGFSE Trigger: CTCTGAGAACCCAGAATCGTGGGCAGCTGGTTCCTGATGCACCAAGGTTTTCTCTGGGTGAAAAGGAAAGCTCACTCGTCCTGGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGGGTGATTGGGTCAGCGGGGCTCTCTCTCCCCGGGTGCGCGGAAGTCCTACAGTAAATTCAAGATaGAGCACTGAGTGCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LKGDWVSGALSPRVRGSPTVNSR*STECQD Trigger: ATCCTGGCACTCAGTGCTTCATCTTGAATTTACTGT...AGGACTTCCGCGCACCCGGGGAGAGAGAGCCCCGCTGACCCAATCACCCTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR GCA 90 bp | GTGGCCGGGCATGAGGTGAAATGCTTTTCCTCAGCTGTCTCCTTTCCCAAGCCTCTCCGTGCAGAGCTTTaGCTATCTGTCTGTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: VAGHEVKCFSSAVSFPKPLRAEL*LSVCDS Trigger: GGAGTCACAGACAGATAGGCAAAGCTCTGCACGGAG...AGGCTTGGGAAAGGAGACAGCTGAGGAAAAGCATTTCACCTCATGCCCGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTAAAGCCCTCACCAGATaGTCCTCCTCTGCTTCACGT | + |
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Preference number: 2 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPKALTR*SSSASR Trigger: ACGTGAAGCAGAGGAGGAGCATCTGGTGAGGGCTTT...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR CCA 90 bp | GACCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCACTGAAGGGCTCCAATaGCATTTGCTCTCAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: DQRCFNASRLGPHHASFFTEGLQ*HLLSGS Trigger: GGAGCCTGAGAGCAAATGCCATTGGAGCCCTTCAGT...GAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR GCA 90 bp | TCGGGCAATCTCTGTCCCTGCCCATGGAATCTCCCTGTCGGTAGTCATGAGAACCCTGAAGCTCCCAACTaGTTAGAACTCATACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SGNLCPCPWNLPVGSHENPEAPN*LELIPC Trigger: GCAGGGTATGAGTTCTAAGCAGTTGGGAGCTTCAGG...GTTCTCATGACTACCGACAGGGAGATTCCATGGGCAGGGACAGAGATTGCCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR CCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCTCAATGCCTCCAGGTTaGGCCCCCACCACGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCSMPPG*APTTLP Trigger: AGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGA...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR GCA 90 bp | CTGTCACCAGGCCATAAGTCTTGTCTCTACCCTGCTTCCCTACTTTGCTCTTCTTTGTCCCCAGCCCAGTaGACACTGAAGGGCTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: LSPGHKSCLYPASLLCSSLSPAQ*TLKGSN Trigger: ATTGGAGCCCTTCAGTGTGCACTGGGCTGGGGACAA...AGAAGAGCAAAGTAGGGAAGCAGGGTAGAGACAAGACTTATGGCCTGGTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTTACATCTTGTTTCCATaGAGACTTCCCAGTGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPYILFP*RLPSER Trigger: GCGCTCACTGGGAAGTCTCCATGGAAACAAGATGTA...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR CCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCGCTGGGCCCAAAGCTaGCTCTCCCTTCCTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCRWAQS*LSLPSF Trigger: GAAAGAAGGAAGGGAGAGCCAGCTTTGGGCCCAGCG...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR CAA 90 bp | AGAGCCCTAGGTCCTGGGCTCTTCTCACAGTGTCTTGATAAGCAGTaGTCTAAAGTGGCCGGGCATGAGGTGAAATGCTTTTCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RALGPGLFSQCLDKQ*SKVAGHEVKCFSSA Trigger: AGCTGAGGAAAAGCATTTCACCTCATGCCCGGCCACTTTAGACAACTGCTTATCAAGACACTGTGAGAAGAGCCCAGGACCTAGGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCCCAACCTTCTCCCCTaGAGCTCCCAACTGCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCPNLLP*SSQLLR Trigger: TCTAAGCAGTTGGGAGCTTCAGGGGAGAAGGTTGGG...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| 3UTR-3UTR TCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCAGGTCCGTTCTGCCCTaGGAACTCCTGATGCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCRSVLP*ELLMLA Trigger: AGCTAGCATCAGGAGTTCTCAGGGCAGAACGGACCT...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCCATCTGGATTTGCCTaGAAACTGCCCAGGAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCPSGFA*KLPRNP Trigger: GGGGTTCCTGGGCAGTTTCCAGGCAAATCCAGATGG...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | TGGGAAACCCAGCAGGTCTGCCGTTTAAAGGGTGATTaGGTCAGCGGGGCTCTCTCTCCCCGGGTGCGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: WETQQVCRLKGD*VSGALSPRVRG Trigger: TCCGCGCACCCGGGGAGAGAGAGCCCCGCTGACCCAATCACCCTTTAAACGGCAGACCTGCTGGGTTTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | TGCATGGGAAACCCAGCAGGTCTGCCGTTTAAAGGGTaGTTGGGTCAGCGGGGCTCTCTCTCCCCGGGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: CMGNPAGLPFKG*LGQRGSLSPGA Trigger: CGCACCCGGGGAGAGAGAGCCCCGCTGACCCAATCACCCTTTAAACGGCAGACCTGCTGGGTTTCCCATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | AGGCACCTCTTGCTGGGCAAGATGGAGCCCCTAGTCTaGGCCGCCTGGCCTGCCTGCCATGAAACCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RHLLLGKMEPLV*AAWPACHETFL Trigger: GAGAAAGGTTTCATGGCAGGCAGGCCAGGCGGCCCAGACTAGGGGCTCCATCTTGCCCAGCAAGAGGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | GGAGCCCCTAGTCTGGGCCGCCTGGCCTGCCTGCCATaGAACCTTTCTCCTTCCACTCACTCCACCTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GAPSLGRLACLP*NLSPSTHSTSS Trigger: ACTTGAGGTGGAGTGAGTGGAAGGAGAAAGGTTTCATGGCAGGCAGGCCAGGCGGCCCAGACTAGGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | TTGCTGGGCAAGATGGAGCCCCTAGTCTGGGCCGCCTaGCCTGCCTGCCATGAAACCTTTCTCCTTCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: LLGKMEPLVWAA*PACHETFLLPL Trigger: GAGTGGAAGGAGAAAGGTTTCATGGCAGGCAGGCCAGGCGGCCCAGACTAGGGGCTCCATCTTGCCCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CAA 90 bp | GACCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCGCGCTGAGGCACCTCTaGCTGGGCAAGATGGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DQRCFNASRLGPHHASFFALRHL*LGKMEP Trigger: GGGCTCCATCTTGCCCAGCAAGAGGTGCCTCAGCGC...GAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | CGGTGGTGGCGATCCGAGGCCCTCTCCCAGGACGAGTaGGCTTTCCTTTTCACCCAGAGAAAACCTTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RWWRSEALSQDE*AFLFTQRKPWC Trigger: GCACCAAGGTTTTCTCTGGGTGAAAAGGAAAGCTCACTCGTCCTGGGAGAGGGCCTCGGATCGCCACCACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | AAGATGGAGCCCCTAGTCTGGGCCGCCTGGCCTGCCTaGCATGAAACCTTTCTCCTTCCACTCACTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: KMEPLVWAAWPA*HETFLLPLTPP Trigger: AGGTGGAGTGAGTGGAAGGAGAAAGGTTTCATGGCAGGCAGGCCAGGCGGCCCAGACTAGGGGCTCCATCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | GAGACCGTCTGCTGCCATCTGGATTTGCCTGGAAACTaGCCAGGAACCCCCGGCTCTGGTCCTCACACACTA | + |
|
Preference number: 3 (lower is better) Translates to: ETVCCHLDLPGN*PGTPGSGPHTL Trigger: TAGTGTGTGAGGACCAGAGCCGGGGGTTCCTGGGCAGTTTCCAGGCAAATCCAGATGGCAGCAGACGGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | CTTGTCCCCAGCCCAGTGCACACTGAAGGGCTCCAATaGCATTTGCTCTCAGGCTCCGTGCAGAGCTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVPSPVHTEGLQ*HLLSGSVQSFA Trigger: GGCAAAGCTCTGCACGGAGCCTGAGAGCAAATGCCATTGGAGCCCTTCAGTGTGCACTGGGCTGGGGACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTTCGGTGTGTAGAGCCTaGTCCCCAGCCCAGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPSVCRA*SPAQCT Trigger: TGTGCACTGGGCTGGGGACAAGGCTCTACACACCGA...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | TCCCCTGAAGCTCCCAACTGCTTAGAACTCATACCCTaGCCTGAGGTCAGGTCTCCTCCAACTCCTGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPEAPNCLELIP*PEVRSPPTPEP Trigger: GGGCTCAGGAGTTGGAGGAGACCTGACCTCAGGGCAGGGTATGAGTTCTAAGCAGTTGGGAGCTTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | AACACACAGTCAACTGTCCCACCTCCAGATCCACCGTaGCCTTGCCTTCGGTGTGTAGAGCCTTGTCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NTQSTVPPPDPP*PCLRCVEPCPQ Trigger: CTGGGGACAAGGCTCTACACACCGAAGGCAAGGCCACGGTGGATCTGGAGGTGGGACAGTTGACTGTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | CTGATGCAGTGTAGCCAGCTGCCTCCTTGGGCACACTaGGCTGGGGACATGCTGCCATTGATGTTTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LMQCSQLPPWAH*AGDMLPLMFCG Trigger: CCCACAAAACATCAATGGCAGCATGTCCCCAGCCCAGTGTGCCCAAGGAGGCAGCTGGCTACACTGCATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | GAGAGGGGGAAGGTGGGTCCAAAGAGATGGAGGATCTaGCCAGGTCCCACAGCAAGTACAAAGCAGAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ERGKVGPKRWRI*PGPTASTKQSP Trigger: AGGGCTCTGCTTTGTACTTGCTGTGGGACCTGGCCAGATCCTCCATCTCTTTGGACCCACCTTCCCCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAGCGGTGGTGGCGATCCGAGGCCCTCTCCCAGGACGAGTGAGCTTTCCTATGGTGAAAAAGCACTaGCCTAGTATAGTTCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TAAVVAIRGPLPGRVSFPMVKKH*PSIVQA Trigger: GGCCTGAACTATACTAGGCAAGTGCTTTTTCACCAT...AGGAAAGCTCACTCGTCCTGGGAGAGGGCCTCGGATCGCCACCACCGCTGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | GGGAGGGTGGGAACTAGAGCTGGGGAGAGTGGCCAGTaGTGTGTCCTATGGGAGACAAACACACAGTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: GRVGTRAGESGQ*CVLWETNTQST Trigger: AGTTGACTGTGTGTTTGTCTCCCATAGGACACAGCACTGGCCACTCTCCCCAGCTCTAGTTCCCACCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | CTACTCAGAGCACATGCATGGGAAACCCAGCAGGTCTaGCGTTTAAAGGGTGATTGGGTCAGCGGGGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLRAHAWETQQV*RLKGDWVSGAL Trigger: GAGAGCCCCGCTGACCCAATCACCCTTTAAACGGCAGACCTGCTGGGTTTCCCATGCATGTGCTCTGAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | TTCCTTCCTGGTCAGTGCTGTCTTCTCCACCCTGAGTaGCGCCTACTCAGAGCACATGCATGGGAAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLPGQCCLLHPE*RLLRAHAWETQ Trigger: CTGGGTTTCCCATGCATGTGCTCTGAGTAGGCGGCACTCAGGGTGGAGAAGACAGCACTGACCAGGAAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | ACAGAAAGCCCAGGTGAAGGACTCACCAACAGACACTaGATCATGCTGGCTTGCCCCAGTCCTGTGACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TESPGEGLTNRH*IMLACPSPVTA Trigger: GGCTGTCACAGGACTGGGGCAAGCCAGCATGATGCAGTGTCTGTTGGTGAGTCCTTCACCTGGGCTTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | CCTGAAGTAATGGATGCTATCCTTTCCTGGAAGGTCTaGGCCATGGGCGCTGAGGCACCTCTTGCTGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PEVMDAILSWKV*AMGAEAPLAGQ Trigger: TTGCCCAGCAAGAGGTGCCTCAGCGCCCATGGCCCAGACCTTCCAGGAAAGGATAGCATCCATTACTTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | GGATTTGCCTGGAAACTGCCCAGGAACCCCCGGCTCTaGTCCTCACACACTATCCTAGGAAGAACCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GFAWKLPRNPRL*SSHTILGRTLL Trigger: CAGCAAGGTTCTTCCTAGGATAGTGTGTGAGGACCAGAGCCGGGGGTTCCTGGGCAGTTTCCAGGCAAATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGGGTGATTGGGTCAGCGGGGCTCTCTCTCCCCGGGTGCGCGGAAGTCCTGTGATACCTAAAGGTTaGTGGGCAGAGAATAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKGDWVSGALSPRVRGSPVIPKG*WAENKR Trigger: CCTCTTATTCTCTGCCCACAAACCTTTAGGTATCAC...AGGACTTCCGCGCACCCGGGGAGAGAGAGCCCCGCTGACCCAATCACCCTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | CTTCTTCCTTCCTGGTCAGTGCTGTCTTCTCCACCCTaGGTGCCGCCTACTCAGAGCACATGCATGGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPSWSVLSSPP*VPPTQSTCMGN Trigger: GTTTCCCATGCATGTGCTCTGAGTAGGCGGCACTCAGGGTGGAGAAGACAGCACTGACCAGGAAGGAAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | CCAATGGCATTTGCTCTCAGGCTCCGTGCAGAGCTTTaGCTATCTGTCTGTGACTCCCAACCTTCTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PMAFALRLRAEL*LSVCDSQPSPL Trigger: CAGGGGAGAAGGTTGGGAGTCACAGACAGATAGGCAAAGCTCTGCACGGAGCCTGAGAGCAAATGCCATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | TTGCCTCGAAAAGGTGGGGAAATTGAGACCGTCTGCTaGCATCTGGATTTGCCTGGAAACTGCCCAGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: LPRKGGEIETVC*HLDLPGNCPGT Trigger: GGTTCCTGGGCAGTTTCCAGGCAAATCCAGATGGCAGCAGACGGTCTCAATTTCCCCACCTTTTCGAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | CTAGGAAGTGATGGGTCTGGACCAAAGATGTTTCAATaGCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LGSDGSGPKMFQ*LQVGPPPRFLL Trigger: AAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGGTCCAGACCCATCACTTCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCGGGCTCCAATGGCATTaGCTCTCAGGCTCCGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCGLQWH*LSGSVQ Trigger: CTGCACGGAGCCTGAGAGCAAATGCCATTGGAGCCC...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | TCTCCTCCAACTCCTGAGCCCACACCACTGAACCCATaGCCTCTACATCTTGTTTCCATGGAGACTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPPTPEPTPLNP*PLHLVSMETSQ Trigger: CTGGGAAGTCTCCATGGAAACAAGATGTAGAGGTCATGGGTTCAGTGGTGTGGGCTCAGGAGTTGGAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | AGGTCAGGTCTCCTCCAACTCCTGAGCCCACACCACTaGACCCATGACCTCTACATCTTGTTTCCATGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSGLLQLLSPHH*THDLYILFPWR Trigger: TCTCCATGGAAACAAGATGTAGAGGTCATGGGTTCAGTGGTGTGGGCTCAGGAGTTGGAGGAGACCTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | TTTGCCTATCTGTCTGTGACTCCCAACCTTCTCCCCTaGAGCTCCCAACTGCTTAGAACTCATACCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: FAYLSVTPNLLP*SSQLLRTHTLP Trigger: GGGCAGGGTATGAGTTCTAAGCAGTTGGGAGCTTCAGGGGAGAAGGTTGGGAGTCACAGACAGATAGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | GGAATCTCCCTGTCGGTAGTCATGAGAACTACTCCGTaGAGGGCCAGGACCACTTACTTGCACAGCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GISLSVVMRTTP*RARTTYLHSSK Trigger: TTTGCTGCTGTGCAAGTAAGTGGTCCTGGCCCTTCACGGAGTAGTTCTCATGACTACCGACAGGGAGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | AGCTCTTGCCAAATCTCACCACACAGAAAGCCCAGGTaGAGGACTCACCAACAGACACTGCATCATGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSCQISPHRKPR*RTHQQTLHHAG Trigger: GCCAGCATGATGCAGTGTCTGTTGGTGAGTCCTTCACCTGGGCTTTCTGTGTGGTGAGATTTGGCAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | CCTTTGTCCAGCAAGGAGTTACAGAGAGAACTCAGCTaGCTAAGCATGTGTTGGGGTTATCAGTCCGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLSSKELQRELS*LSMCWGYQSAG Trigger: CCCAGCGGACTGATAACCCCAACACATGCTTAGGCAGCTGAGTTCTCTCTGTAACTCCTTGCTGGACAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | GAAGGACTCACCAACAGACACTGCATCATGCTGGCTTaGCCCAGTCCTGTGACAGCCTCTTTTCAAACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EGLTNRHCIMLA*PSPVTASFQTS Trigger: TGAGGTTTGAAAAGAGGCTGTCACAGGACTGGGGCAAGCCAGCATGATGCAGTGTCTGTTGGTGAGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | TCACCCAGAGAAAACCTTGGTGCATCAGGAACCAGCTaGCCACGATTCTGGGTTCTCAGAGAGATTGCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SPRENLGASGTS*PRFWVLREIAL Trigger: TAGCGCAATCTCTCTGAGAACCCAGAATCGTGGGCAGCTGGTTCCTGATGCACCAAGGTTTTCTCTGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTCATGACCTCTACATCTaGTTTCCATGGAGACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPHDLYI*FPWRLP Trigger: GGGAAGTCTCCATGGAAACAAGATGTAGAGGTCATG...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGCAATCTCTGTCCCTGCCCATGGAATCTCCCTGTCGGTAGTCATGAGAACCACCTTGAGGGATTTTaGGGAAAGGAAGGCAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SGNLCPCPWNLPVGSHENHLEGF*GKEGSN Trigger: GTTACTGCCTTCCTTTCCCAAAAATCCCTCAAGGTG...GTTCTCATGACTACCGACAGGGAGATTCCATGGGCAGGGACAGAGATTGCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | TGCCCTAGCTCCCAAATGGACCACACTGCTAGGAAGTaGTGGGTCTGGACCAAAGATGTTTCAATGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CPSSQMDHTARK*WVWTKDVSMPP Trigger: TGGAGGCATTGAAACATCTTTGGTCCAGACCCATCACTTCCTAGCAGTGTGGTCCATTTGGGAGCTAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | TACATAAAGCCTGAAGTAATGGATGCTATCCTTTCCTaGAAGGTCTGGGCCATGGGCGCTGAGGCACCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YIKPEVMDAILS*KVWAMGAEAPL Trigger: AAGAGGTGCCTCAGCGCCCATGGCCCAGACCTTCCAGGAAAGGATAGCATCCATTACTTCAGGCTTTATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | AACCTTGGTGCATCAGGAACCAGCTGCCCACGATTCTaGGTTCTCAGAGAGATTGCGCTAGAAACAGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: NLGASGTSCPRF*VLREIALETVT Trigger: TGTCACTGTTTCTAGCGCAATCTCTCTGAGAACCCAGAATCGTGGGCAGCTGGTTCCTGATGCACCAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCGCTGCCATTGATGTTTaGTGGGGGCCTGGATGTACT | + |
|
Preference number: 3 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCAAIDV*WGPGCT Trigger: AGTACATCCAGGCCCCCACAAAACATCAATGGCAGC...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | GAGTCCCTTCCTCACGTGCCCTGCCTGTCTAACAGTTaGGCTAAAAACTCTAGTTTCCTAAATGAGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ESLPHVPCLSNS*AKNSSFLNESG Trigger: CCCTGACTCATTTAGGAAACTAGAGTTTTTAGCCCAACTGTTAGACAGGCAGGGCACGTGAGGAAGGGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CCA 72 bp | GTCATCCTAGCACTCATAAGACAGAGGCAGGGGGATTaGAAGTTTGAGCCCAGTGTAGGCTACACCATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VILALIRQRQGD*KFEPSVGYTIR Trigger: TCTTATGGTGTAGCCTACACTGGGCTCAAACTTCCAATCCCCCTGCCTCTGTCTTATGAGTGCTAGGATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | TTGATAAGCAGTTGTCTAAAGTGGCCGGGCATGAGGTaGAATGCTTTTCCTCAGCTGTCTCCTTTCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LISSCLKWPGMR*NAFPQLSPFPS Trigger: GCTTGGGAAAGGAGACAGCTGAGGAAAAGCATTTCACCTCATGCCCGGCCACTTTAGACAACTGCTTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | CTCACACACTATCCTAGGAAGAACCTTGCTGCACTGTaGTACCTAAAGGTTTGTGGGCAGAGAATAAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTHYPRKNLAAL*YLKVCGQRIRG Trigger: CCCTCTTATTCTCTGCCCACAAACCTTTAGGTATCACAGTGCAGCAAGGTTCTTCCTAGGATAGTGTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | TGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTaGCACCACGCCCAGTACATAACAGCTTGTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLLHSQDWLTGM*HHAQYITACLF Trigger: AAACAAACAAGCTGTTATGTACTGGGCGTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| 3UTR CCA 72 bp | CACTTACTTGCACAGCAGCAAAGTCAACTTTGTCTCTaGTCTCCTAAACTGTCTCAGGATCTGGCTCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: HLLAQQQSQLCL*SPKLSQDLAQL Trigger: TAGCTGAGCCAGATCCTGAGACAGTTTAGGAGACCAGAGACAAAGTTGACTTTGCTGCTGTGCAAGTAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR TCA 72 bp | AGCTCAGTGAGTCTGAAGTCTGTGGTACATAAAGCCTaGAGTAATGGATGCTATCCTTTCCTGGAAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSVSLKSVVHKA*SNGCYPFLEGL Trigger: CAGACCTTCCAGGAAAGGATAGCATCCATTACTTCAGGCTTTATGTACCACAGACTTCAGACTCACTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR GCA 72 bp | CAGTGTGTTTGCTTTATTATGTTGCAATGTCACGGATaGTTACTACATAGCCAAGACTGGCTTACAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: QCVCFIMLQCHG*LLHSQDWLTGM Trigger: CATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAACATAATAAAGCAAACACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| 3UTR CAA 72 bp | CCTGGAAGGTCTGGGCCATGGGCGCTGAGGCACCTCTaGCTGGGCAAGATGGAGCCCCTAGTCTGGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRSGPWALRHL*LGKMEPLVWAA Trigger: GGCGGCCCAGACTAGGGGCTCCATCTTGCCCAGCAAGAGGTGCCTCAGCGCCCATGGCCCAGACCTTCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | TCCACCGTGGCCTTGCCTTCGGTGTGTAGAGCCTTGTCCCCAGCCCAGTGCACATCAAGGCCCAGGTCCTaGCGCAGGAGGCGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STVALPSVCRALSPAQCTSRPRS*RRRRSS Trigger: GCTGCTGCGCCTCCTGCGCCAGGACCTGGGCCTTGA...TGTGCACTGGGCTGGGGACAAGGCTCTACACACCGAAGGCAAGGCCACGGTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGGGCCATGGGCGCTGAGGCACCTCTTGCTGGGCAAGATGGAGCCCCTAGCAGCGCCCAGAGGCTaGGCAGCAGCAGATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSGPWALRHLLLGKMEPLAAPRG*AAADAA Trigger: TGCTGCATCTGCTGCTGCCCAGCCTCTGGGCGCTGC...TAGGGGCTCCATCTTGCCCAGCAAGAGGTGCCTCAGCGCCCATGGCCCAGACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGGTGATTGGGTCAGCGGGGCTCTCTCTCCCCGGGTGCGCGGAAGTCCTCTGAGGTTCTGGTCCTaGCTCAGTGGCGGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKGDWVSGALSPRVRGSPLRFWS*LSGGRA Trigger: GGCTCTGCCGCCACTGAGGCAGGACCAGAACCTCAG...AGGACTTCCGCGCACCCGGGGAGAGAGAGCCCCGCTGACCCAATCACCCTTTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CAA 72 bp | AAGGCACTCAGGTCCGGGGTGACCCCAGCCTTTACCTaGACCCTGAGGCTGCCCTCTGTTCCTGGGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KALRSGVTPAFT*TLRLPSVPGSL Trigger: GAGAGACCCAGGAACAGAGGGCAGCCTCAGGGTCAAGGTAAAGGCTGGGGTCACCCCGGACCTGAGTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTCCATTGAGCAGCAGCTaGGTGAGGCGGGGCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPPLSSS*VRRGSA Trigger: GGCGCTGCCCCGCCTCACCCAGCTGCTGCTCAATGG...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTGCCGCTCCCGAAGCGTaGACTGGATCTCTCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPAAPEA*TGSLAA Trigger: GGCTGCGAGAGATCCAGTCCACGCTTCGGGAGCGGC...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| 3UTR CAA 72 bp | GGTGGGGAAATTGAGACCGTCTGCTGCCATCTGGATTaGCCTGGAAACTGCCCAGGAACCCCCGGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGEIETVCCHLD*PGNCPGTPGSG Trigger: ACCAGAGCCGGGGGTTCCTGGGCAGTTTCCAGGCAAATCCAGATGGCAGCAGACGGTCTCAATTTCCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTGCTCATGGTCCTTCTTaGGGCACTGCAGGTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPAHGPS*GTAGPG Trigger: CCCGGGACCTGCAGTGCCCCAAGAAGGACCATGAGC...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGGGCCATGGGCGCTGAGGCACCTCTTGCTGGGCAAGATGGAGCCCCTACTCTGGGTTTTCCTGTaGTGTTTTCGCTTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSGPWALRHLLLGKMEPLLWVFL*CFRLEC Trigger: GCACTCCAAGCGAAAACACCACAGGAAAACCCAGAG...TAGGGGCTCCATCTTGCCCAGCAAGAGGTGCCTCAGCGCCCATGGCCCAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR TCA 90 bp | TCGGGCAATCTCTGTCCCTGCCCATGGAATCTCCCTGTCGGTAGTCATGAGAACTCTGGAGGCTGCTCTTaGGGCTGCTCTGGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGNLCPCPWNLPVGSHENSGGCS*GCSGFS Trigger: GGAAAACCCAGAGCAGCCTCAAGAGCAGCCTCCAGA...GTTCTCATGACTACCGACAGGGAGATTCCATGGGCAGGGACAGAGATTGCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR GCA 90 bp | TGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCACTCCTTCTTGGGGCACTaGAGGTCCCGGGCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHGCLLHSQDWLTGMCHHSFLGH*RSRARF Trigger: GAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGA...GTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTGGGCCGAGAGCGGGATaGCAGAAAGATCCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPGPRAG*QKDPQS Trigger: AGACTGTGGATCTTTCTGGCATCCCGCTCTCGGCCC...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | TGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCACTGGAGACAGCAGCAGTaGTCTCAGCCATGCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CHGCLLHSQDWLTGMCHHWRQQQ*SQPCRP Trigger: GGGGCGGCATGGCTGAGACCACTGCTGCTGTCTCCA...GTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGCAATCTCTGTCCCTGCCCATGGAATCTCCCTGTCGGTAGTCATGAGAACTGTGGAGGATGTCAGTaGGGAGGTTCCCTTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGNLCPCPWNLPVGSHENCGGCQ*GGSLQG Trigger: GCCTTGAAGGGAACCTCCTCACTGACATCCTCCACA...GTTCTCATGACTACCGACAGGGAGATTCCATGGGCAGGGACAGAGATTGCCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR TCA 90 bp | CACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCACGCCCTCTCCCAGGACGAGTaGGCTTTCCTTTTCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGCLLHSQDWLTGMCHHALSQDE*AFLFTQ Trigger: CTGGGTGAAAAGGAAAGCTCACTCGTCCTGGGAGAG...GGCGTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
||
| 3UTR CAA 72 bp | GGAGTTACAGAGAGAACTCAGCTGCCTAAGCATGTGTaGGGGTTATCAGTCCGCTGGGCCCAAAGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVTERTQLPKHV*GLSVRWAQSWL Trigger: GAGCCAGCTTTGGGCCCAGCGGACTGATAACCCCAACACATGCTTAGGCAGCTGAGTTCTCTCTGTAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR GCA 90 bp | ATGTTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGCAGTGGTCTCAGCCATaGCGCCCCCAGGCTCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLQCHGCLLHSQDWLTGMQWSQP*RPQARG Trigger: ACCTCGAGCCTGGGGGCGGCATGGCTGAGACCACTG...CATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCTGGAGACAGCAGCAGTaGTCTCAGCCATGCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCWRQQQ*SQPCRP Trigger: GGGGCGGCATGGCTGAGACCACTGCTGCTGTCTCCA...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCGGCAGAGCCCCAGGTaGAGACAGCAGCAGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCRQSPR*RQQQWS Trigger: AGACCACTGCTGCTGTCTCCACCTGGGGCTCTGCCG...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| 3UTR CAA 72 bp | AGCCTGGCTCCAGAAAGCCCCAAACTTTGTCCCGAGTaGTTAAGGCACAGGGGAAGTCCAACAGCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLAPESPKLCPE*LRHRGSPTASS Trigger: GCTTGAAGCTGTTGGACTTCCCCTGTGCCTTAACAACTCGGGACAAAGTTTGGGGCTTTCTGGAGCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR TCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCATCGCTCAGCTCCGTaGAGCTCAGGTCCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCHRSAP*SSGPGP Trigger: TGGTCCTGGACCTGAGCTTCACGGAGCTGAGCGATG...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR GCA 90 bp | TTATGTTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCACAGTGGTCTCAGCCATaGCGCCCCCAGGCTCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCCNVTDAYYIAKTGLQAQWSQP*RPQARG Trigger: ACCTCGAGCCTGGGGGCGGCATGGCTGAGACCACTG...TGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAACATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCACGACTTCCAGAGCTCATaGTCCTTCTTGGGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHGCLLHSQDWLTGMCHHDFQSS*SFLGHC Trigger: GCAGTGCCCCAAGAAGGACCATGAGCTCTGGAAGTC...GTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCACAACCCTGAGGTTCTaGTCCTGCCTCAGTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCTTLRF*SCLSGG Trigger: GCCGCCACTGAGGCAGGACCAGAACCTCAGGGTTGT...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGCAATCTCTGTCCCTGCCCATGGAATCTCCCTGTCGGTAGTCATGAGAACCAAGGGTTGGGGAAGTaGAGACACATCCACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGNLCPCPWNLPVGSHENQGLGK*RHIHIV Trigger: AACAATGTGGATGTGTCTTCACTTCCCCAACCCTTG...GTTCTCATGACTACCGACAGGGAGATTCCATGGGCAGGGACAGAGATTGCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR TCA 90 bp | CACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCACGCCCAAGGGTTGGGGAAGTaGAGACACATCCACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HGCLLHSQDWLTGMCHHAQGLGK*RHIHIV Trigger: AACAATGTGGATGTGTCTTCACTTCCCCAACCCTTG...GGCGTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS-3UTR CCA 90 bp | CCAAAGATGTTTCAATGCCTCCAGGTTGGGCCCCCACCACGCTTCCTTCTTCCTCTCTTGAGGCTGCTCTaGGTTTTCCTGTGGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKMFQCLQVGPPPRFLLPLLRLL*VFLWCF Trigger: AAAACACCACAGGAAAACCCAGAGCAGCCTCAAGAG...AGGAAGAAGGAAGCGTGGTGGGGGCCCAACCTGGAGGCATTGAAACATCTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | ATTATGTTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCCGGCAGAGCCCCAGGTaGAGACAGCAGCAGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IMLQCHGCLLHSQDWLTGRQSPR*RQQQWS Trigger: AGACCACTGCTGCTGTCTCCACCTGGGGCTCTGCCG...GCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAACATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCACAGCTGCCCACGATTCTaGGTTCTCAGAGAGATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CHGCLLHSQDWLTGMCHHSCPRF*VLREIA Trigger: CGCAATCTCTCTGAGAACCCAGAATCGTGGGCAGCT...GTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
||
| CDS-3UTR CCA 90 bp | ATTATGTTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCACAACCCTGAGGTTCTaGTCCTGCCTCAGTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IMLQCHGCLLHSQDWLTGTTLRF*SCLSGG Trigger: GCCGCCACTGAGGCAGGACCAGAACCTCAGGGTTGT...GCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAACATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCACACCCAGAGAAAACCTTaGTGCATCAGGAACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHGCLLHSQDWLTGMCHHTQRKP*CIRNQL Trigger: CAGCTGGTTCCTGATGCACCAAGGTTTTCTCTGGGT...GTGGTGGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
||
| 3UTR CAA 72 bp | GGTCCTGGGCTCTTCTCACAGTGTCTTGATAAGCAGTaGTCTAAAGTGGCCGGGCATGAGGTGAAATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPGLFSQCLDKQ*SKVAGHEVKCF Trigger: AAAGCATTTCACCTCATGCCCGGCCACTTTAGACAACTGCTTATCAAGACACTGTGAGAAGAGCCCAGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CCA 90 bp | ATGTTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGAAAGTCACATTCCTGTaGAGGATGTCAGTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLQCHGCLLHSQDWLTGMKVTFL*RMSVRR Trigger: CCTCCTCACTGACATCCTCCACAGGAATGTGACTTT...CATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS CCA 90 bp | GGCGCAGCAGCTGCCGAGCGCGCTCCGGCCGCCGCTCCCGAAGCGTaGACTGGATCTCTCGCAGCCAGCGCACCCGGCGCTCGTAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GAAAAERAPAAAPEA*TGSLAASAPGARRA Trigger: CGCCCTACGAGCGCCGGGTGCGCTGGCTGCGAGAGATCCAGTCCACGCTTCGGGAGCGGCGGCCGGAGCGCGCTCGGCAGCTGCTGCGCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS CCA 90 bp | GTCCTGCCTCAGTGGCGGCAGAGCCCCAGGTGGAGACAGCAGCAGTaGTCTCAGCCATGCCGCCCCCAGGCTCGAGGTCCAGGCCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLPQWRQSPRWRQQQ*SQPCRPQARGPGPH Trigger: ATGAGGGCCTGGACCTCGAGCCTGGGGGCGGCATGGCTGAGACCACTGCTGCTGTCTCCACCTGGGGCTCTGCCGCCACTGAGGCAGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS CCA 90 bp | AACCCTGAGGTTCTGGTCCTGCCTCAGTGGCGGCAGAGCCCCAGGTaGAGACAGCAGCAGTGGTCTCAGCCATGCCGCCCCCAGGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NPEVLVLPQWRQSPR*RQQQWSQPCRPQAR Trigger: TCGAGCCTGGGGGCGGCATGGCTGAGACCACTGCTGCTGTCTCCACCTGGGGCTCTGCCGCCACTGAGGCAGGACCAGAACCTCAGGGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS TCA 90 bp | CAGGTCCAGGACCACCAGCTCTACACCACGAGTGTCCAGGTAGCGTaGTATGTGCTGCACATCCCGGGCCGAGAGCGGGATGCCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVQDHQLYTTSVQVA*YVLHIPGRERDARK Trigger: CTTTCTGGCATCCCGCTCTCGGCCCGGGATGTGCAGCACATATCACGCTACCTGGACACTCGTGGTGTAGAGCTGGTGGTCCTGGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS TCA 90 bp | AGAGGCTGGGCAGCAGCAGATGCAGCAGCTCATCGCTCAGCTCCGTaGAGCTCAGGTCCAGGACCACCAGCTCTACACCACGAGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGWAAADAAAHRSAP*SSGPGPPALHHECP Trigger: TGGACACTCGTGGTGTAGAGCTGGTGGTCCTGGACCTGAGCTTCACGGAGCTGAGCGATGAGCTGCTGCATCTGCTGCTGCCCAGCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS TCA 90 bp | CTGGCTCAGTCGCCTCCGGAGGCCAACCAGCAAGGGTTGGGGAAGTaGAGACACATCCACATTGTTCCCCAGGTCCACCCAGGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LAQSPPEANQQGLGK*RHIHIVPQVHPGQH Trigger: GTGTTGGCCTGGGTGGACCTGGGGAACAATGTGGATGTGTCTTCACTTCCCCAACCCTTGCTGGTTGGCCTCCGGAGGCGACTGAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS GCA 90 bp | TCTCAGAGAGATTGCGCTGGCACAACAACCCTGAGGTTCTGGTCCTaGCTCAGTGGCGGCAGAGCCCCAGGTGGAGACAGCAGCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQRDCAGTTTLRFWS*LSGGRAPGGDSSSG Trigger: ACCACTGCTGCTGTCTCCACCTGGGGCTCTGCCGCCACTGAGGCAGGACCAGAACCTCAGGGTTGTTGTGCCAGCGCAATCTCTCTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGCGGTGGTGGCGATCCGAGGCCCTCTCCCAGGACGAGTGAGCTTTCCTTTCTGGAGGCTGCTCTaGAGGCTGCTCTGGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TAAVVAIRGPLPGRVSFPFWRLL*RLLWVF Trigger: GAAAACCCAGAGCAGCCTCAAGAGCAGCCTCCAGAA...AGGAAAGCTCACTCGTCCTGGGAGAGGGCCTCGGATCGCCACCACCGCTGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS CCA 90 bp | GAGGTATGCTGGCTCAGTCGCCTCCGGAGGCCAACCAGCAAGGGTTaGGGAAGTGAAGACACATCCACATTGTTCCCCAGGTCCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVCWLSRLRRPTSKG*GSEDTSTLFPRSTQ Trigger: CTGGGTGGACCTGGGGAACAATGTGGATGTGTCTTCACTTCCCCAACCCTTGCTGGTTGGCCTCCGGAGGCGACTGAGCCAGCATACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
||
| CDS GCA 90 bp | CCAGGTAGCGTGATATGTGCTGCACATCCCGGGCCGAGAGCGGGATaGCAGAAAGATCCACAGTCTCCCCTACCAGCAGAGTCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGSVICAAHPGPRAG*QKDPQSPLPAESSG Trigger: TCCAGAAGACTCTGCTGGTAGGGGAGACTGTGGATCTTTCTGGCATCCCGCTCTCGGCCCGGGATGTGCAGCACATATCACGCTACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
||
| CDS-3UTR CAA 90 bp | CAAGTACAAAGCAGAGCCCTAGGTCCTGGGCTCTTCTCACAGTGTCTTGATAAGAGCTCATGGTCCTTCTaGGGGCACTGCAGGTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: QVQSRALGPGLFSQCLDKSSWSF*GHCRSR Trigger: CCGGGACCTGCAGTGCCCCAAGAAGGACCATGAGCT...CTTATCAAGACACTGTGAGAAGAGCCCAGGACCTAGGGCTCTGCTTTGTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| CDS-3UTR CAA 90 bp | CTCCACTGTCACCAGGCCATAAGTCTTGTCTCTACCCTGCTTCCCTACTTTGCTGTCAGCCGATTGCCATaGAGCAGCAGCTGGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LHCHQAISLVSTLLPYFAVSRLP*SSSWVR Trigger: CCTCACCCAGCTGCTGCTCAATGGCAATCGGCTGAC...AGCAAAGTAGGGAAGCAGGGTAGAGACAAGACTTATGGCCTGGTGACAGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| CDS CCA 90 bp | TCATGGGAGATGGGGTCCACCAAGTTAAGGAAAGTCACATTCCTGTaGAGGATGTCAGTGAGGAGGTTCCCTTCAAGGCCCAGGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SWEMGSTKLRKVTFL*RMSVRRFPSRPRSW Trigger: CCAGGACCTGGGCCTTGAAGGGAACCTCCTCACTGACATCCTCCACAGGAATGTGACTTTCCTTAACTTGGTGGACCCCATCTCCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| CDS-3UTR CAA 90 bp | TGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCGGGTTCTCAGAGAGATaGCGCTGGCACAACAACCCT | + |
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Preference number: 5 (lower is better) Translates to: CNVTDAYYIAKTGLQACAGFSER*RWHNNP Trigger: AGGGTTGTTGTGCCAGCGCAATCTCTCTGAGAACCC...GGCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
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| CDS-3UTR CAA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCGAAGACACATCCACATaGTTCCCCAGGTCCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCEDTST*FPRSTQ Trigger: CTGGGTGGACCTGGGGAACAATGTGGATGTGTCTTC...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
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| CDS-3UTR CAA 90 bp | ATTATGTTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCAGCTGCCGACAGATCTaGTCCGAGGACTTCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: IMLQCHGCLLHSQDWLTGSCRQI*SEDFQS Trigger: GCTCTGGAAGTCCTCGGACAAGATCTGTCGGCAGCT...GCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAACATAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| CDS-3UTR CAA 90 bp | TTGCAATGTCACGGATGCTTACTACATAGCCAAGACTGGCTTACAGGCATGTGCCACCCAGAGAAAACCTaGGTGCATCAGGAACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LQCHGCLLHSQDWLTGMCHPEKT*VHQEPA Trigger: AGCTGGTTCCTGATGCACCAAGGTTTTCTCTGGGTG...GCACATGCCTGTAAGCCAGTCTTGGCTATGTAGTAAGCATCCGTGACATTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
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| CDS CCA 72 bp | GCTGCCGAGCGCGCTCCGGCCGCCGCTCCCGAAGCGTaGACTGGATCTCTCGCAGCCAGCGCACCCGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: AAERAPAAAPEA*TGSLAASAPGA Trigger: AGCGCCGGGTGCGCTGGCTGCGAGAGATCCAGTCCACGCTTCGGGAGCGGCGGCCGGAGCGCGCTCGGCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| CDS CCA 72 bp | TGGCACAACAACCCTGAGGTTCTGGTCCTGCCTCAGTaGCGGCAGAGCCCCAGGTGGAGACAGCAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: WHNNPEVLVLPQ*RQSPRWRQQQW Trigger: CCACTGCTGCTGTCTCCACCTGGGGCTCTGCCGCCACTGAGGCAGGACCAGAACCTCAGGGTTGTTGTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
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| CDS CAA 90 bp | TTCCCCAGGTCCACCCAGGCCAACACGGGGAACTTGGCAGTGTCCTaGATAGCCTCGGTGAGTTCCCGGGCAGCAGCTCTGGTCAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: FPRSTQANTGNLAVS*IASVSSRAAALVSR Trigger: TCGGCTGACCAGAGCTGCTGCCCGGGAACTCACCGAGGCTATCAAGGACACTGCCAAGTTCCCCGTGTTGGCCTGGGTGGACCTGGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
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| CDS CCA 72 bp | CAGAGAGATTGCGCTGGCACAACAACCCTGAGGTTCTaGTCCTGCCTCAGTGGCGGCAGAGCCCCAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: QRDCAGTTTLRF*SCLSGGRAPGG Trigger: TCCACCTGGGGCTCTGCCGCCACTGAGGCAGGACCAGAACCTCAGGGTTGTTGTGCCAGCGCAATCTCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
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| CDS TCA 72 bp | GCAGCAGCAGATGCAGCAGCTCATCGCTCAGCTCCGTaGAGCTCAGGTCCAGGACCACCAGCTCTACACCAC | + |
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Preference number: 6 (lower is better) Translates to: AAADAAAHRSAP*SSGPGPPALHH Trigger: GTGGTGTAGAGCTGGTGGTCCTGGACCTGAGCTTCACGGAGCTGAGCGATGAGCTGCTGCATCTGCTGCTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| CDS TCA 72 bp | TGGGTTCTCAGAGAGATTGCGCTGGCACAACAACCCTaGGGTTCTGGTCCTGCCTCAGTGGCGGCAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: WVLREIALAQQP*GSGPASVAAEP Trigger: GGGCTCTGCCGCCACTGAGGCAGGACCAGAACCTCAGGGTTGTTGTGCCAGCGCAATCTCTCTGAGAACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
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| CDS CAA 72 bp | TTGTTCCCCAGGTCCACCCAGGCCAACACGGGGAACTaGGCAGTGTCCTTGATAGCCTCGGTGAGTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: LFPRSTQANTGN*AVSLIASVSSR Trigger: CCGGGAACTCACCGAGGCTATCAAGGACACTGCCAAGTTCCCCGTGTTGGCCTGGGTGGACCTGGGGAACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
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| CDS CAA 90 bp | ACATCCACATTGTTCCCCAGGTCCACCCAGGCCAACACGGGGAACTaGGCAGTGTCCTTGATAGCCTCGGTGAGTTCCCGGGCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TSTLFPRSTQANTGN*AVSLIASVSSRAAA Trigger: AGCTGCTGCCCGGGAACTCACCGAGGCTATCAAGGACACTGCCAAGTTCCCCGTGTTGGCCTGGGTGGACCTGGGGAACAATGTGGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
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| CDS GCA 72 bp | GTGATATGTGCTGCACATCCCGGGCCGAGAGCGGGATaGCAGAAAGATCCACAGTCTCCCCTACCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VICAAHPGPRAG*QKDPQSPLPAE Trigger: CTCTGCTGGTAGGGGAGACTGTGGATCTTTCTGGCATCCCGCTCTCGGCCCGGGATGTGCAGCACATATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051129.10 |
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| CDS CCA 72 bp | TGGCTCAGTCGCCTCCGGAGGCCAACCAGCAAGGGTTaGGGAAGTGAAGACACATCCACATTGTTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WLSRLRRPTSKG*GSEDTSTLFPR Trigger: CCTGGGGAACAATGTGGATGTGTCTTCACTTCCCCAACCCTTGCTGGTTGGCCTCCGGAGGCGACTGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051129.10 ENSMUST00000220172.2 |
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| CDS GCA 72 bp | TCACCCAGAGAAAACCTTGGTGCATCAGGAACCAGCTaGCCACGATTCTGGGTTCTCAGAGAGATTGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPRENLGASGTS*PRFWVLREIAL Trigger: CAGCGCAATCTCTCTGAGAACCCAGAATCGTGGGCAGCTGGTTCCTGATGCACCAAGGTTTTCTCTGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220172.2 |
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