Pregenerated sensors for LRRC75A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046417Ensembl transcript IDs: ENSMUST00000057194.9
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGAACTTCTGGTCCAGATGCACTGGTCTAGGAGGACAGCTGAATaGAAACATCCGAGCCCCTTGAGCAAGTACTGGGAGTCGGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: KELLVQMHWSRRTAE*KHPSPLSKYWESGL Trigger: CAAACCCGACTCCCAGTACTTGCTCAAGGGGCTCGGATGTTTCCATTCAGCTGTCCTCCTAGACCAGTGCATCTGGACCAGAAGTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR TCA 90 bp | AGCAAGTACTGGGAGTCGGGTTTGAGGACAAACTGGTTAGTACTCTaGTCTCATCCTAGTGAGAGTTGGGTAGGGCTGGCCAGACCATCT | + |
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Preference number: 1 (lower is better) Translates to: SKYWESGLRTNWLVL*SHPSESWVGLARPS Trigger: AGATGGTCTGGCCAGCCCTACCCAACTCTCACTAGGATGAGATCAGAGTACTAACCAGTTTGTCCTCAAACCCGACTCCCAGTACTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR GCA 90 bp | AAAGCATTTAAGGCACCCACACTCAATCCCTGTTCTTGGCTGCAGTaGCATGCAAAGACGCCATCTTGTTTGCTTACCTGGCCTGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: KAFKAPTLNPCSWLQ*HAKTPSCLLTWPVR Trigger: CCTTACAGGCCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTGCCTTAAATGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR GCA 90 bp | ATTCCAAAGCATTTAAGGCACCCACACTCAATCCCTGTTCTTGGCTaGAGTGCCATGCAAAGACGCCATCTTGTTTGCTTACCTGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: IPKHLRHPHSIPVLG*SAMQRRHLVCLPGL Trigger: CAGGCCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTGCCTTAAATGCTTTGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CCA 90 bp | CACTGTAAACTTCTGGGCAGTCTCAGCTGTTTGCACAGCTGGACTTaGGCAAAGATTCCAAAGCATTTAAGGCACCCACACTCAATCCCT | + |
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Preference number: 1 (lower is better) Translates to: HCKLLGSLSCLHSWT*AKIPKHLRHPHSIP Trigger: AGGGATTGAGTGTGGGTGCCTTAAATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACTGCCCAGAAGTTTACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CCA 90 bp | AAAGATTCCAAAGCATTTAAGGCACCCACACTCAATCCCTGTTCTTaGCTGCAGTGCCATGCAAAGACGCCATCTTGTTTGCTTACCTGG | + |
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Preference number: 1 (lower is better) Translates to: KDSKAFKAPTLNPCS*LQCHAKTPSCLLTW Trigger: CCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTGCCTTAAATGCTTTGGAATCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR TCA 90 bp | CTAAAAGGTCTGCAGCTTAAACTGGATTTTCCACACTTGGTATTCTaGAACTTACTGCCTTTAAGAAGGCCTTGGGAAGTAGGCAGATGC | + |
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Preference number: 1 (lower is better) Translates to: LKGLQLKLDFPHLVF*NLLPLRRPWEVGRC Trigger: GCATCTGCCTACTTCCCAAGGCCTTCTTAAAGGCAGTAAGTTTCAGAATACCAAGTGTGGAAAATCCAGTTTAAGCTGCAGACCTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTCAGGTGTTAGGCAGTCCAGCTTCAGCACTGTAAACTTCTGGGCAGTCTCATTGGCTGCAGTGCCATaGAAAGACGCCATCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VSGVRQSSFSTVNFWAVSLAAVP*KDAILF Trigger: AAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAA...TGAGACTGCCCAGAAGTTTACAGTGCTGAAGCTGGACTGCCTAACACCTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTTAAGGGTGTTAGGAACACCCAGTTTTCCCTCTTTGCTAAGTAGGACTGGTCATCCTAGTGAGAGTTaGGTAGGGCTGGCCAGACCA | + |
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Preference number: 2 (lower is better) Translates to: CLRVLGTPSFPSLLSRTGHPSES*VGLARP Trigger: TGGTCTGGCCAGCCCTACCCAACTCTCACTAGGATG...ACCAGTCCTACTTAGCAAAGAGGGAAAACTGGGTGTTCCTAACACCCTTAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR CCA 90 bp | GCCATCTTGTTTGCTTACCTGGCCTGTAAGGCTGTTCTTCCCCATAACCCCATGACAGGGACTAGATTATaGGAGGACCTGGTAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: AILFAYLACKAVLPHNPMTGTRL*EDLVEK Trigger: TTTTTCTACCAGGTCCTCCCATAATCTAGTCCCTGT...CATGGGGTTATGGGGAAGAACAGCCTTACAGGCCAGGTAAGCAAACAAGATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCAGCTGTTTGCACAGCTGGACTTGGGCAAAGATTCCAAAGCATTTAAGAAAAGTTGTGCTGGTTaGTGGATAAGGGAGCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: QSQLFAQLDLGKDSKAFKKSCAG*WIRELG Trigger: GCCTAGCTCCCTTATCCACCAACCAGCACAACTTTT...CTTAAATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTTCAGCACTGTAAACTTCTGGGCAGTCTCAGCTGTTTGCACAGCTGGATGGATTTTCCACACTTaGTATTCTGAAACTTACTGC | + |
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Preference number: 2 (lower is better) Translates to: SSFSTVNFWAVSAVCTAGWIFHT*YSETYC Trigger: GCAGTAAGTTTCAGAATACCAAGTGTGGAAAATCCA...TCCAGCTGTGCAAACAGCTGAGACTGCCCAGAAGTTTACAGTGCTGAAGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR TCA 90 bp | GCACAGCTGGACTTGGGCAAAGATTCCAAAGCATTTAAGGCACCCACACTCAATCCACACTTGGTATTCTaGAACTTACTGCCTTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: AQLDLGKDSKAFKAPTLNPHLVF*NLLPLR Trigger: TCTTAAAGGCAGTAAGTTTCAGAATACCAAGTGTGG...ATTGAGTGTGGGTGCCTTAAATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCAGCTGTTTGCACAGCTGGACTTGGGCAAAGATTCCAAAGCATTTAAGCCAATAAAGAACTTCTaGTCCAGATGCACTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: QSQLFAQLDLGKDSKAFKPIKNF*SRCTGL Trigger: TAGACCAGTGCATCTGGACCAGAAGTTCTTTATTGG...CTTAAATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CCA 72 bp | CTGGTCCAGATGCACTGGTCTAGGAGGACAGCTGAATaGAAACATCCGAGCCCCTTGAGCAAGTACTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LVQMHWSRRTAE*KHPSPLSKYWE Trigger: CTCCCAGTACTTGCTCAAGGGGCTCGGATGTTTCCATTCAGCTGTCCTCCTAGACCAGTGCATCTGGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CCA 72 bp | GGTGTTAGGCAGTCCAGCTTCAGCACTGTAAACTTCTaGGCAGTCTCAGCTGTTTGCACAGCTGGACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: GVRQSSFSTVNF*AVSAVCTAGLG Trigger: CCCAAGTCCAGCTGTGCAAACAGCTGAGACTGCCCAGAAGTTTACAGTGCTGAAGCTGGACTGCCTAACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR TCA 72 bp | TGGGAGTCGGGTTTGAGGACAAACTGGTTAGTACTCTaGTCTCATCCTAGTGAGAGTTGGGTAGGGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: WESGLRTNWLVL*SHPSESWVGLA Trigger: GGCCAGCCCTACCCAACTCTCACTAGGATGAGATCAGAGTACTAACCAGTTTGTCCTCAAACCCGACTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR GCA 72 bp | ACCCACACTCAATCCCTGTTCTTGGCTGCAGTGCCATaGAAAGACGCCATCTTGTTTGCTTACCTGGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: THTQSLFLAAVP*KDAILFAYLAC Trigger: ACAGGCCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR GCA 72 bp | AAGGCACCCACACTCAATCCCTGTTCTTGGCTGCAGTaGCATGCAAAGACGCCATCTTGTTTGCTTACCTGG | + |
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Preference number: 3 (lower is better) Translates to: KAPTLNPCSWLQ*HAKTPSCLLTW Trigger: CCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGCATTTAAGGCACCCACACTCAATCCCTGTTCTTGGCTGCAGTGCCATGAAGACGCCATCTTGTTaGCTTACCTGGCCTGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: PKHLRHPHSIPVLGCSAMKTPSC*LTWPVR Trigger: CCTTACAGGCCAGGTAAGCAAACAAGATGGCGTCTT...CATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTGCCTTAAATGCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CCA 72 bp | AGTGGGCCCAATAAAGAACTTCTGGTCCAGATGCACTaGTCTAGGAGGACAGCTGAATGGAAACATCCGAGC | + |
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Preference number: 3 (lower is better) Translates to: SGPNKELLVQMH*SRRTAEWKHPS Trigger: GCTCGGATGTTTCCATTCAGCTGTCCTCCTAGACCAGTGCATCTGGACCAGAAGTTCTTTATTGGGCCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR GCA 72 bp | CATTTAAGGCACCCACACTCAATCCCTGTTCTTGGCTaGAGTGCCATGCAAAGACGCCATCTTGTTTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: HLRHPHSIPVLG*SAMQRRHLVCL Trigger: TAAGCAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTGCCTTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CCA 72 bp | AAAGCATTTAAGGCACCCACACTCAATCCCTGTTCTTaGCTGCAGTGCCATGCAAAGACGCCATCTTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: KAFKAPTLNPCS*LQCHAKTPSCL Trigger: CAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTGCCTTAAATGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR GCA 72 bp | TTCAGCACTGTAAACTTCTGGGCAGTCTCAGCTGTTTaGACAGCTGGACTTGGGCAAAGATTCCAAAGCATT | + |
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Preference number: 3 (lower is better) Translates to: FSTVNFWAVSAV*TAGLGQRFQSI Trigger: AATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACTGCCCAGAAGTTTACAGTGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CCA 72 bp | TGTAAACTTCTGGGCAGTCTCAGCTGTTTGCACAGCTaGACTTGGGCAAAGATTCCAAAGCATTTAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: CKLLGSLSCLHS*TWAKIPKHLRH Trigger: GTGCCTTAAATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACTGCCCAGAAGTTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTTAAGGGTGTTAGGAACACCCAGTTTTCCCTCTTTGCTAAGTAGGACTGGTTCTAGAGGTGAGTTTTaGAAAAGCCAATACAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: CLRVLGTPSFPSLLSRTGSRGEF*KSQYRD Trigger: GTCCCTGTATTGGCTTTTCAAAAACTCACCTCTAGA...ACCAGTCCTACTTAGCAAAGAGGGAAAACTGGGTGTTCCTAACACCCTTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR GCA 90 bp | GTGTCAGGTGTTAGGCAGTCCAGCTTCAGCACTGTAAACTTCTGGGCAGTCTCAAGGTCCTGGCGCAGGTaGTGCAGCAGCGTCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: VSGVRQSSFSTVNFWAVSRSWRR*CSSVPA Trigger: GGCGGGGACGCTGCTGCAGCACCTGCGCCAGGACCT...TGAGACTGCCCAGAAGTTTACAGTGCTGAAGCTGGACTGCCTAACACCTGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR GCA 90 bp | CACCCACACTCAATCCCTGTTCTTGGCTGCAGTGCCATGCAAAGACGCCATCTTGCAGCTCCTGGACCATaGCGACGCGCCGGTGATAGG | + |
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Preference number: 4 (lower is better) Translates to: HPHSIPVLGCSAMQRRHLAAPGP*RRAGDR Trigger: CCTATCACCGGCGCGTCGGCATGGTCCAGGAGCTGC...AAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR GCA 90 bp | TCCAGCTTCAGCACTGTAAACTTCTGGGCAGTCTCAGCTGTTTGCACAGCTGGACTCTCTCCGCCAGGCTaGCCTTGGTCTGCCGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SSFSTVNFWAVSAVCTAGLSPPG*PWSAEC Trigger: GCACTCGGCAGACCAAGGGCAGCCTGGCGGAGAGAG...TCCAGCTGTGCAAACAGCTGAGACTGCCCAGAAGTTTACAGTGCTGAAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | GTGTTAGGAACACCCAGTTTTCCCTCTTTGCTAAGTAGGACTGGTTCTAGAGGTTCCTCCCGCCGGCCCTaGCGCACCATCCGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VLGTPSFPSLLSRTGSRGSSRRP*RTIRSS Trigger: GCTGCTGCGGATGGTGCGCCAGGGCCGGCGGGAGGA...ACCTCTAGAACCAGTCCTACTTAGCAAAGAGGGAAAACTGGGTGTTCCTAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | TCCAGCTTCAGCACTGTAAACTTCTGGGCAGTCTCAGCTGTTTGCACAGCTGGATCCATGCCCAGGTCCTaGCGCAGGTGCTGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSFSTVNFWAVSAVCTAGSMPRS*RRCCSS Trigger: GCTGCTGCAGCACCTGCGCCAGGACCTGGGCATGGA...TCCAGCTGTGCAAACAGCTGAGACTGCCCAGAAGTTTACAGTGCTGAAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGATCAGAGGGACCCTGACCTGTCTTGGCTGTCCAGAAAGGACTCACTGGTACTTTCCTGGCCCCTaGCAGGTGTCACAGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: LLIRGTLTCLGCPERTHWYFPGP*QVSQDS Trigger: GGAGTCCTGTGACACCTGCCAGGGGCCAGGAAAGTA...CCAGTGAGTCCTTTCTGGACAGCCAAGACAGGTCAGGGTCCCTCTGATCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | GCCATCTTGTTTGCTTACCTGGCCTGTAAGGCTGTTCTTCCCCATAACCCCATGCATCACCTTCCGGCTTaGGGCAGTGGATGTAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: AILFAYLACKAVLPHNPMHHLPA*GSGCSA Trigger: CGCGCTACATCCACTGCCCCAAGCCGGAAGGTGATG...CATGGGGTTATGGGGAAGAACAGCCTTACAGGCCAGGTAAGCAAACAAGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | CACCCACACTCAATCCCTGTTCTTGGCTGCAGTGCCATGCAAAGACGCCATCTTCTTAAGGCAGGCCTGTaGCTTCCTCTTCAGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: HPHSIPVLGCSAMQRRHLLKAGL*LPLQPS Trigger: CGAGGGCTGAAGAGGAAGCCACAGGCCTGCCTTAAG...AAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR TCA 90 bp | TGCCATGCAAAGACGCCATCTTGTTTGCTTACCTGGCCTGTAAGGCTGTTCTTCGACGAGGCAGGGTACTaGGAGCTGGCAGTAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CHAKTPSCLLTWPVRLFFDEAGY*ELAVAA Trigger: TGCAGCTACTGCCAGCTCTCAGTACCCTGCCTCGTC...GAAGAACAGCCTTACAGGCCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | TGTTTAAGGGTGTTAGGAACACCCAGTTTTCCCTCTTTGCTAAGTAGGACTGGTATCCGCAGCAGCTCCTaGACCATGCCGACGCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: CLRVLGTPSFPSLLSRTGIRSSS*TMPTRR Trigger: CCGGCGCGTCGGCATGGTCCAGGAGCTGCTGCGGAT...ACCAGTCCTACTTAGCAAAGAGGGAAAACTGGGTGTTCCTAACACCCTTAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | CACCCACACTCAATCCCTGTTCTTGGCTGCAGTGCCATGCAAAGACGCCATCTTCCAGGTTCCGGAAGCTaGCATAGCGGTACAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: HPHSIPVLGCSAMQRRHLPGSGS*HSGTAH Trigger: ATGTGCTGTACCGCTATGCCAGCTTCCGGAACCTGG...AAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR TCA 90 bp | AGTCTCAGCTGTTTGCACAGCTGGACTTGGGCAAAGATTCCAAAGCATTTAAGGCCTTCAGGGTGTCAGTaGGGTCCCTCAGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLSCLHSWTWAKIPKHLRPSGCQ*GPSAEP Trigger: GGGCTCTGCTGAGGGACCTCACTGACACCCTGAAGG...CCTTAAATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CAA 72 bp | CTGTTCTTGGCTGCAGTGCCATGCAAAGACGCCATCTaGTTTGCTTACCTGGCCTGTAAGGCTGTTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LFLAAVPCKDAI*FAYLACKAVLP Trigger: GGGAAGAACAGCCTTACAGGCCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR TCA 90 bp | CACCCACACTCAATCCCTGTTCTTGGCTGCAGTGCCATGCAAAGACGCCATCTTAGTCAGTGGAATGCCTaGCAGATCCACCATGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: HPHSIPVLGCSAMQRRHLSQWNA*QIHHVV Trigger: GACAACATGGTGGATCTGTCAGGCATTCCACTGACT...AAGATGGCGTCTTTGCATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR TCA 90 bp | CCAAAGCATTTAAGGCACCCACACTCAATCCCTGTTCTTGGCTGCAGTGCCATGCCAGGTCAATCCATGTaGCATTGGGGAATTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PKHLRHPHSIPVLGCSAMPGQSM*HWGICW Trigger: CCAGCAAATTCCCCAATGTCACATGGATTGACCTGG...CATGGCACTGCAGCCAAGAACAGGGATTGAGTGTGGGTGCCTTAAATGCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CAA 72 bp | TCTTGGCTGCAGTGCCATGCAAAGACGCCATCTTGTTaGCTTACCTGGCCTGTAAGGCTGTTCTTCCCCATA | + |
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Preference number: 4 (lower is better) Translates to: SWLQCHAKTPSC*LTWPVRLFFPI Trigger: TATGGGGAAGAACAGCCTTACAGGCCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCACTGCAGCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR TCA 90 bp | ACTGGATTTTCCACACTTGGTATTCTGAAACTTACTGCCTTTAAGAAGGCCTTGAGCGCTTCCGGAGGCTaGGCAGAAAGGGCTGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: TGFSTLGILKLTAFKKALSASGG*AERAGV Trigger: TACCCCAGCCCTTTCTGCTCAGCCTCCGGAAGCGCT...CAAGGCCTTCTTAAAGGCAGTAAGTTTCAGAATACCAAGTGTGGAAAATCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | CAGTCTCAGCTGTTTGCACAGCTGGACTTGGGCAAAGATTCCAAAGCATTTAAGCACCCAGCTCAAGGATaGTTGGTAGGTGGCCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: QSQLFAQLDLGKDSKAFKHPAQG*LVGGPV Trigger: AACAGGGCCACCTACCAACCATCCTTGAGCTGGGTG...CTTAAATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | CAGTCTCAGCTGTTTGCACAGCTGGACTTGGGCAAAGATTCCAAAGCATTTAAGCACTCTGTACTTTCCTaGCCCCTGGCAGGTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: QSQLFAQLDLGKDSKAFKHSVLS*PLAGVT Trigger: TGTGACACCTGCCAGGGGCCAGGAAAGTACAGAGTG...CTTAAATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| 3UTR CAA 72 bp | CTTCAGCACTGTAAACTTCTGGGCAGTCTCAGCTGTTaGCACAGCTGGACTTGGGCAAAGATTCCAAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LQHCKLLGSLSC*HSWTWAKIPKH Trigger: ATGCTTTGGAATCTTTGCCCAAGTCCAGCTGTGCAAACAGCTGAGACTGCCCAGAAGTTTACAGTGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR GCA 90 bp | GTAAGTGGGCCCAATAAAGAACTTCTGGTCCAGATGCACTGGTCTAGGAGGACATTGAAGTCAGTGGAATaGCTGACAGATCCACCATGT | + |
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Preference number: 4 (lower is better) Translates to: VSGPNKELLVQMHWSRRTLKSVE*LTDPPC Trigger: ACATGGTGGATCTGTCAGGCATTCCACTGACTTCAA...TGTCCTCCTAGACCAGTGCATCTGGACCAGAAGTTCTTTATTGGGCCCACTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | TGTTTAAGGGTGTTAGGAACACCCAGTTTTCCCTCTTTGCTAAGTAGGACTGGTCATTGGGGAATTTGCTaGGGTCCTTCAGGGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: CLRVLGTPSFPSLLSRTGHWGIC*GPSGCQ Trigger: CTGACACCCTGAAGGACCCCAGCAAATTCCCCAATG...ACCAGTCCTACTTAGCAAAGAGGGAAAACTGGGTGTTCCTAACACCCTTAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CCA 90 bp | ACTGGATTTTCCACACTTGGTATTCTGAAACTTACTGCCTTTAAGAAGGCCTTGGATCGGTACCTTCCCTaGCTTCTTCCCCAGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: TGFSTLGILKLTAFKKALDRYLP*LLPQYL Trigger: CAGGTACTGGGGAAGAAGCCAGGGAAGGTACCGATC...CAAGGCCTTCTTAAAGGCAGTAAGTTTCAGAATACCAAGTGTGGAAAATCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS GCA 90 bp | AGCTGGCATAGCGGTACAGCACATCATCCAGGGAGGTTGACTCCATaGCCAGGTCCTGGCGCAGGTGCTGCAGCAGCGTCCCCGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SWHSGTAHHPGRLTP*PGPGAGAAAASPPP Trigger: AGGAGGCGGGGACGCTGCTGCAGCACCTGCGCCAGGACCTGGGCATGGAGTCAACCTCCCTGGATGATGTGCTGTACCGCTATGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS CCA 90 bp | CCAGCTCCACGCTGTCCACCTGTTCTCCACAGCGCTGAAGGTAGCTaGTCACTCGCTCGAGGTCCCTTGAAGTCAGTGGAATGCCTGACA | + |
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Preference number: 5 (lower is better) Translates to: PAPRCPPVLHSAEGS*SLARGPLKSVECLT Trigger: TGTCAGGCATTCCACTGACTTCAAGGGACCTCGAGCGAGTGACCAGCTACCTTCAGCGCTGTGGAGAACAGGTGGACAGCGTGGAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS TCA 90 bp | GGATGGTTGGTAGGTGGCCCTGTTTTGGAGAGCGCTTCCGGAGGCTaGGCAGAAAGGGCTGGGGTAGTGAGAAGATGTCCACATTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GWLVGGPVLESASGG*AERAGVVRRCPHCC Trigger: GCAACAATGTGGACATCTTCTCACTACCCCAGCCCTTTCTGCTCAGCCTCCGGAAGCGCTCTCCAAAACAGGGCCACCTACCAACCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CAA 90 bp | TCTCCTGATCAGAGGGACCCTGACCTGTCTTGGCTGTCCAGAAAGGACTCACTGCATCATCCAGGGAGGTaGACTCCATGCCCAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SPDQRDPDLSWLSRKDSLHHPGR*TPCPGP Trigger: AGGACCTGGGCATGGAGTCAACCTCCCTGGATGATG...CAGTGAGTCCTTTCTGGACAGCCAAGACAGGTCAGGGTCCCTCTGATCAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CAA 90 bp | CTCCTGATCAGAGGGACCCTGACCTGTCTTGGCTGTCCAGAAAGGACTCACTGGCCAGCTCAAGGATGGTaGGTAGGTGGCCCTGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: LLIRGTLTCLGCPERTHWPAQGW*VGGPVL Trigger: CAAAACAGGGCCACCTACCAACCATCCTTGAGCTGG...CCAGTGAGTCCTTTCTGGACAGCCAAGACAGGTCAGGGTCCCTCTGATCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS GCA 90 bp | GAAGGTAGCTGGTCACTCGCTCGAGGTCCCTTGAAGTCAGTGGAATaGCTGACAGATCCACCATGTTGTCTGGAGGATTCCCAGATAGGA | + |
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Preference number: 5 (lower is better) Translates to: EGSWSLARGPLKSVE*LTDPPCCLEDSQIG Trigger: TCCTATCTGGGAATCCTCCAGACAACATGGTGGATCTGTCAGGCATTCCACTGACTTCAAGGGACCTCGAGCGAGTGACCAGCTACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CAA 90 bp | GTAAGTGGGCCCAATAAAGAACTTCTGGTCCAGATGCACTGGTCTAGGAGGACACTCGCTCGAGGTCCCTaGAAGTCAGTGGAATGCCTG | + |
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Preference number: 5 (lower is better) Translates to: VSGPNKELLVQMHWSRRTLARGP*KSVECL Trigger: CAGGCATTCCACTGACTTCAAGGGACCTCGAGCGAG...TGTCCTCCTAGACCAGTGCATCTGGACCAGAAGTTCTTTATTGGGCCCACTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CAA 90 bp | GCCATCTTGTTTGCTTACCTGGCCTGTAAGGCTGTTCTTCCCCATAACCCCATGGTCAGTCGGTTGCCATaGAGGGCAAGTGTGGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: AILFAYLACKAVLPHNPMVSRLP*RASVVR Trigger: TCTTACCACACTTGCCCTCAATGGCAACCGACTGAC...CATGGGGTTATGGGGAAGAACAGCCTTACAGGCCAGGTAAGCAAACAAGATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CAA 90 bp | ACTGGATTTTCCACACTTGGTATTCTGAAACTTACTGCCTTTAAGAAGGCCTTGGTAGGTGGCCCTGTTTaGGAGAGCGCTTCCGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: TGFSTLGILKLTAFKKALVGGPV*ESASGG Trigger: GCCTCCGGAAGCGCTCTCCAAAACAGGGCCACCTAC...CAAGGCCTTCTTAAAGGCAGTAAGTTTCAGAATACCAAGTGTGGAAAATCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS-3UTR CAA 90 bp | TGCCATGCAAAGACGCCATCTTGTTTGCTTACCTGGCCTGTAAGGCTGTTCTTCGAGAAGATGTCCACATaGTTGCCCAGGTCAATCCAT | + |
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Preference number: 5 (lower is better) Translates to: CHAKTPSCLLTWPVRLFFEKMST*LPRSIH Trigger: ATGGATTGACCTGGGCAACAATGTGGACATCTTCTC...GAAGAACAGCCTTACAGGCCAGGTAAGCAAACAAGATGGCGTCTTTGCATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS TCA 72 bp | GCTGGCATAGCGGTACAGCACATCATCCAGGGAGGTTaGCTCCATGCCCAGGTCCTGGCGCAGGTGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AGIAVQHIIQGG*LHAQVLAQVLQ Trigger: CTGCAGCACCTGCGCCAGGACCTGGGCATGGAGTCAACCTCCCTGGATGATGTGCTGTACCGCTATGCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS TCA 72 bp | GTAGGTGGCCCTGTTTTGGAGAGCGCTTCCGGAGGCTaGGCAGAAAGGGCTGGGGTAGTGAGAAGATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VGGPVLESASGG*AERAGVVRRCP Trigger: TGGACATCTTCTCACTACCCCAGCCCTTTCTGCTCAGCCTCCGGAAGCGCTCTCCAAAACAGGGCCACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS TCA 72 bp | CTGGCAGGTGTCACAGGACTCCCTATAGGGTCCTGCTaGTCGGTACCTTCCCTGGCTTCTTCCCCAGTACCT | + |
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Preference number: 6 (lower is better) Translates to: LAGVTGLPIGSC*SVPSLASSPVP Trigger: AGGTACTGGGGAAGAAGCCAGGGAAGGTACCGATCAGCAGGACCCTATAGGGAGTCCTGTGACACCTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS CCA 72 bp | CGCTGTCCACCTGTTCTCCACAGCGCTGAAGGTAGCTaGTCACTCGCTCGAGGTCCCTTGAAGTCAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RCPPVLHSAEGS*SLARGPLKSVE Trigger: TTCCACTGACTTCAAGGGACCTCGAGCGAGTGACCAGCTACCTTCAGCGCTGTGGAGAACAGGTGGACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS CCA 72 bp | TTTGGAGAGCGCTTCCGGAGGCTGAGCAGAAAGGGCTaGGGTAGTGAGAAGATGTCCACATTGTTGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FGERFRRLSRKG*GSEKMSTLLPR Trigger: CCTGGGCAACAATGTGGACATCTTCTCACTACCCCAGCCCTTTCTGCTCAGCCTCCGGAAGCGCTCTCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS CAA 90 bp | GTTCTCCACAGCGCTGAAGGTAGCTGGTCACTCGCTCGAGGTCCCTaGAAGTCAGTGGAATGCCTGACAGATCCACCATGTTGTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VLHSAEGSWSLARGP*KSVECLTDPPCCLE Trigger: CTCCAGACAACATGGTGGATCTGTCAGGCATTCCACTGACTTCAAGGGACCTCGAGCGAGTGACCAGCTACCTTCAGCGCTGTGGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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| CDS CAA 72 bp | AGCGCTGAAGGTAGCTGGTCACTCGCTCGAGGTCCCTaGAAGTCAGTGGAATGCCTGACAGATCCACCATGT | + |
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Preference number: 6 (lower is better) Translates to: SAEGSWSLARGP*KSVECLTDPPC Trigger: ACATGGTGGATCTGTCAGGCATTCCACTGACTTCAAGGGACCTCGAGCGAGTGACCAGCTACCTTCAGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057194.9 |
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