Pregenerated sensors for LRRC74B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022759Ensembl transcript IDs: ENSMUST00000023442.13, ENSMUST00000100123.10, ENSMUST00000232637.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCCAGCGGGATTTaGGTATGGAGAGCTATGGCACAGAGTCAGCTCTGGGGCACAGAT | + |
Preference number: 1 (lower is better) Translates to: GVSALLGDQLSPSGI*VWRAMAQSQLWGTD Trigger: ATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | TGGGAGACCAGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTATaGCACAGAGTCAGCTCTGGGGCACAGATGGAAACCAGAAGCACA | + |
Preference number: 1 (lower is better) Translates to: WETSSLPAGFGYGEL*HRVSSGAQMETRST Trigger: TGTGCTTCTGGTTTCCATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | ATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGTaGGATTTGGGTATGAGGAGCTGTGGCACAGGCTCAGCTCTGGAT | + |
Preference number: 1 (lower is better) Translates to: ISLCVSTPGRPVLSR*DLGMRSCGTGSALD Trigger: ATCCAGAGCTGAGCCTGTGCCACAGCTCCTCATACCCAAATCCCACCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | CAGAAGTGGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTaGGAGACCAGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTA | + |
Preference number: 1 (lower is better) Translates to: QKWWFHLCSQVCQHS*ETSSLPAGFGYGEL Trigger: TAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCACTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | TGGGAGACCAGTTCTCTCCCGGTGGGATTTGGGTATGAGGAGCTGTaGCACAGGCTCAGCTCTGGATGTAGACGGAAACTGGAAGGATCT | + |
Preference number: 1 (lower is better) Translates to: WETSSLPVGFGYEEL*HRLSSGCRRKLEGS Trigger: AGATCCTTCCAGTTTCCGTCTACATCCAGAGCTGAGCCTGTGCCACAGCTCCTCATACCCAAATCCCACCGGGAGAGAACTGGTCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | CTGACTGTGACTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTaGGAGACCAGTTCTCTCCCGGTGGGATTTGGGTATGAGGAGCTG | + |
Preference number: 1 (lower is better) Translates to: LTVTCSSYKPVCQHS*ETSSLPVGFGYEEL Trigger: CAGCTCCTCATACCCAAATCCCACCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAGTCACAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR GCA 90 bp | TCCCTCTTCAACCAGGAATTTGAGCAGAAGTGGTGGTTTCACCTATaGTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCCA | + |
Preference number: 1 (lower is better) Translates to: SLFNQEFEQKWWFHL*SQVCQHSWETSSLP Trigger: TGGGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCACTTCTGCTCAAATTCCTGGTTGAAGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | CTGGCTGTTCCTTGGTCCCTCTTCAACCAGGAATTTGAGCAGAAGTaGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAG | + |
Preference number: 1 (lower is better) Translates to: LAVPWSLFNQEFEQK*WFHLCSQVCQHSWE Trigger: CTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCACTTCTGCTCAAATTCCTGGTTGAAGAGGGACCAAGGAACAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | CCCAGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCTCTaGGGCACAGATGGAAACCAGAAGCACATGGGTGATTTTATAATT | + |
Preference number: 1 (lower is better) Translates to: PSGIWVWRAMAQSQL*GTDGNQKHMGDFII Trigger: AATTATAAAATCACCCATGTGCTTCTGGTTTCCATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | GAAGAGGGCATTGGATCCCATTACATATGGTTGTGGGCCACCATGTaGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGT | + |
Preference number: 1 (lower is better) Translates to: EEGIGSHYIWLWATM*LLEIELRTSERTVS Trigger: ACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCCCACAACCATATGTAATGGGATCCAATGCCCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | TATAAGTACACTGTGGTTATCTTCAGACACACCAGAAGAGGGCATTaGATCCCATTACATATGGTTGTGGGCCACCATGTGGTTGCTGGA | + |
Preference number: 1 (lower is better) Translates to: YKYTVVIFRHTRRGH*IPLHMVVGHHVVAG Trigger: TCCAGCAACCACATGGTGGCCCACAACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACAGTGTACTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 90 bp | GAACTGAGTCACCAGAACATGAAGATCTGGATGACAAGAATGTCATaGACCTTGTGTTCAGTGTTGTTCATGGGCAGCTTTTTGGTTGAA | + |
Preference number: 1 (lower is better) Translates to: ELSHQNMKIWMTRMS*TLCSVLFMGSFLVE Trigger: TTCAACCAAAAAGCTGCCCATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAGATCTTCATGTTCTGGTGACTCAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR GCA 90 bp | ATGAGTTATGACTGTCTTCTTGCAAGAGAGCTTGGGAGATCCATTTaGATATCTCCTTTATGTTTTGTTGAACTGAGTCACCAGAACATG | + |
Preference number: 1 (lower is better) Translates to: MSYDCLLARELGRSI*ISPLCFVELSHQNM Trigger: CATGTTCTGGTGACTCAGTTCAACAAAACATAAAGGAGATATGCAAATGGATCTCCCAAGCTCTCTTGCAAGAAGACAGTCATAACTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR GCA 90 bp | CAGAAGCACATGGGTGATTTTATAATTCAGAATGTAATGATCAGTTaGCTTCCAATGAGTTATGACTGTCTTCTTGCAAGAGAGCTTGGG | + |
Preference number: 1 (lower is better) Translates to: QKHMGDFIIQNVMIS*LPMSYDCLLARELG Trigger: CCCAAGCTCTCTTGCAAGAAGACAGTCATAACTCATTGGAAGGCAACTGATCATTACATTCTGAATTATAAAATCACCCATGTGCTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR TCA 90 bp | TTTTATAATTCAGAATGTAATGATCAGTTGCCTTCCAATGAGTTATaGCTGTCTTCTTGCAAGAGAGCTTGGGAGATCCATTTGCATATC | + |
Preference number: 1 (lower is better) Translates to: FYNSECNDQLPSNEL*LSSCKRAWEIHLHI Trigger: GATATGCAAATGGATCTCCCAAGCTCTCTTGCAAGAAGACAGTCATAACTCATTGGAAGGCAACTGATCATTACATTCTGAATTATAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CAA 90 bp | AGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCCAGCGGGATTaGGGTATGGAGAGCTATGGCACAGAGTCAGCTCTGGGGCACAGA | + |
Preference number: 2 (lower is better) Translates to: RCVSTPGRPALSQRD*GMESYGTESALGHR Trigger: TCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CAA 90 bp | CTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGTGGGATTaGGGTATGAGGAGCTGTGGCACAGGCTCAGCTCTGGATGTAGAC | + |
Preference number: 2 (lower is better) Translates to: LCVSTPGRPVLSRWD*GMRSCGTGSALDVD Trigger: GTCTACATCCAGAGCTGAGCCTGTGCCACAGCTCCTCATACCCAAATCCCACCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | TGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGCTCTGGGGCACAGATaGAAACCAGAAGCACATGGG | + |
Preference number: 2 (lower is better) Translates to: CSSYKPVCQHSWETSSLPALGHR*KPEAHG Trigger: CCCATGTGCTTCTGGTTTCCATCTGTGCCCCAGAGC...CGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | GTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTGCACAGAGTCAGCTCTaGGGCACAGATGGAAACCAG | + |
Preference number: 2 (lower is better) Translates to: VVSPMLSGVSALLGDQLSAQSQL*GTDGNQ Trigger: CTGGTTTCCATCTGTGCCCCAGAGCTGACTCTGTGC...AGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | GTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGAGCGGGATTTGGGTATaGAGAGCTATGGCACAGAGT | + |
Preference number: 2 (lower is better) Translates to: VPPISLCVSTPGRPVLSRSGIWV*RAMAQS Trigger: ACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCT...CCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR GCA 90 bp | GACCAGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCCAGATTATGGAAGATaGCAGAGAGCAGAAAGGAAG | + |
Preference number: 2 (lower is better) Translates to: DQLSPSGIWVWRAMAQSQPDYGR*QRAERK Trigger: CTTCCTTTCTGCTCTCTGGCATCTTCCATAATCTGG...CTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR GCA 90 bp | CAACTGCCTGTAACACAAGTCTCAGGGGATCTGACACCTTCTTCTTGCCCCCAATGCACCCATCCCCAATaGTGGAGATACCCCGTTCTT | + |
Preference number: 2 (lower is better) Translates to: QLPVTQVSGDLTPSSCPQCTHPQ*WRYPVL Trigger: AAGAACGGGGTATCTCCAGCATTGGGGATGGGTGCA...TTGGGGGCAAGAAGAAGGTGTCAGATCCCCTGAGACTTGTGTTACAGGCAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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3UTR-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGGTGTGTCAGCACTCCTaGGAGACCAGCTCTCTCCCA | + |
Preference number: 2 (lower is better) Translates to: PPCGCWKLNSGPLKEQSVVCQHS*ETSSLP Trigger: TGGGAGAGAGCTGGTCTCCCAGGAGTGCTGACACAC...CACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | TGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGCTTCAACCAGGAATTTaGGCAGAAGTGGTGGTTTCA | + |
Preference number: 2 (lower is better) Translates to: CSSYKPVCQHSWETSSLPLQPGI*AEVVVS Trigger: TGAAACCACCACTTCTGCTCAAATTCCTGGTTGAAG...CGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR GCA 90 bp | TGGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCCAGATTATGGAAGATaGCAGAGAGCAGAAAGGAAG | + |
Preference number: 2 (lower is better) Translates to: WWFHLCSQVCQHSWETSSPDYGR*QRAERK Trigger: CTTCCTTTCTGCTCTCTGGCATCTTCCATAATCTGG...AGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCTTCAACCAGGAATTTaGGCAGAAGTGGTGGTTTCA | + |
Preference number: 2 (lower is better) Translates to: LVPPISLCVSTPGRPVLSLQPGI*AEVVVS Trigger: TGAAACCACCACTTCTGCTCAAATTCCTGGTTGAAG...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | TGGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTAATGAAGCCAGATTATaGAAGATGCCAGAGAGCAGA | + |
Preference number: 2 (lower is better) Translates to: WWFHLCSQVCQHSWETSSNEARL*KMPESR Trigger: TCTGCTCTCTGGCATCTTCCATAATCTGGCTTCATT...AGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | GGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCGTTCAGTGTTGTTCATaGGCAGCTTTTTGGTTGAAT | + |
Preference number: 2 (lower is better) Translates to: GFTYALRCVSTPGRPALSVQCCS*AAFWLN Trigger: ATTCAACCAAAAAGCTGCCCATGAACAACACTGAAC...GGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | TGGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTATGAACCACAGCAAATaGAGCCAGATTATGGAAGAT | + |
Preference number: 2 (lower is better) Translates to: WWFHLCSQVCQHSWETSSMNHSK*SQIMED Trigger: ATCTTCCATAATCTGGCTTCATTTGCTGTGGTTCAT...AGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | TGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACTGAGGCACAGAGTCAGCTCTaGGGCACAGATGGAAACCAG | + |
Preference number: 2 (lower is better) Translates to: WKLNSGPLKEQSVLLTTEAQSQL*GTDGNQ Trigger: CTGGTTTCCATCTGTGCCCCAGAGCTGACTCTGTGC...CTCAGTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | CCAGTGTCACAGGAGGTGAAATTGCTAATGAGGAAAGCTAGGAGTGGGAAGCGACTGCTCCGACTCATTTaGCTCTTTCCTTTCAGTCTC | + |
Preference number: 2 (lower is better) Translates to: PVSQEVKLLMRKARSGKRLLRLI*LFPFSL Trigger: GAGACTGAAAGGAAAGAGCCAAATGAGTCGGAGCAG...TCGCTTCCCACTCCTAGCTTTCCTCATTAGCAATTTCACCTCCTGTGACACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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3UTR-3UTR GCA 90 bp | GGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCCTTGGGAGATCCATTTaGATATCTCCTTTATGTTTT | + |
Preference number: 2 (lower is better) Translates to: GFTYALRCVSTPGRPALSLGRSI*ISPLCF Trigger: AAAACATAAAGGAGATATGCAAATGGATCTCCCAAG...GGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCGTTCAGTGTTGTTCATaGGCAGCTTTTTGGTTGAAT | + |
Preference number: 2 (lower is better) Translates to: LVPPISLCVSTPGRPVLSVQCCS*AAFWLN Trigger: ATTCAACCAAAAAGCTGCCCATGAACAACACTGAAC...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCAGAACATGAAGATCTaGATGACAAGAATGTCATGG | + |
Preference number: 2 (lower is better) Translates to: LVPPISLCVSTPGRPVLSQNMKI*MTRMSW Trigger: CCATGACATTCTTGTCATCCAGATCTTCATGTTCTG...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | AAAATCTGGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCTGACTGTGACTTGGGGTATGAGGAGCTGTaGCACAGGCTCAGCTCTGGA | + |
Preference number: 2 (lower is better) Translates to: KIWLSVVLAGFAVSDCDLGYEEL*HRLSSG Trigger: TCCAGAGCTGAGCCTGTGCCACAGCTCCTCATACCC...CAAGTCACAGTCAGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | AAAATCTGGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCTGACTGTGACTTGGTGTGTCAGCACTCCTaGGAGACCAGTTCTCTCCCG | + |
Preference number: 2 (lower is better) Translates to: KIWLSVVLAGFAVSDCDLVCQHS*ETSSLP Trigger: CGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACAC...CAAGTCACAGTCAGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CAA 90 bp | GATCCCATTACATATGGTTGTGGGCCACCATGTGGTTGCTGGAAATaGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACT | + |
Preference number: 2 (lower is better) Translates to: DPITYGCGPPCGCWK*NSGPLKEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCCCACAACCATATGTAATGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR GCA 90 bp | TGTGGTTATCTTCAGACACACCAGAAGAGGGCATTGGATCCCATTACATATGGTTGGTGGTTTCACCTATaGTCTCAGGTGTGTCAGCAC | + |
Preference number: 2 (lower is better) Translates to: CGYLQTHQKRALDPITYGWWFHL*SQVCQH Trigger: GTGCTGACACACCTGAGAGCATAGGTGAAACCACCA...ACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | TGGGCCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCATGAACCACAGCAAATaGAGCCAGATTATGGAAGAT | + |
Preference number: 2 (lower is better) Translates to: WATMWLLEIELRTSERTVMNHSK*SQIMED Trigger: ATCTTCCATAATCTGGCTTCATTTGCTGTGGTTCAT...GACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | ACACTGGCTTCTCTTCCAGAGAACCTGAATTCAGTTCTCAGCATCTACAAAGTGCTCACTGTGACTTGGTaGTTGTCTAGCAGATGTCTG | + |
Preference number: 2 (lower is better) Translates to: TLASLPENLNSVLSIYKVLTVTW*LSSRCL Trigger: CAGACATCTGCTAGACAATCACCAAGTCACAGTGAG...CACTTTGTAGATGCTGAGAACTGAATTCAGGTTCTCTGGAAGAGAAGCCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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3UTR-3UTR CCA 90 bp | TTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACGATGTAGACGGAAACTaGAAGGATCTGTTCACTGGC | + |
Preference number: 2 (lower is better) Translates to: LLEIELRTSERTVSALNHDVDGN*KDLFTG Trigger: GCCAGTGAACAGATCCTTCCAGTTTCCGTCTACATC...GTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | TGGGCCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCCCAGAAGCACATGGGTaGTTTTATAATTCAGAATGT | + |
Preference number: 2 (lower is better) Translates to: WATMWLLEIELRTSERTVPEAHG*FYNSEC Trigger: ACATTCTGAATTATAAAATCACCCATGTGCTTCTGG...GACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGATGACAAGAATGTCATaGACCTTGTGTTCAGTGTTG | + |
Preference number: 2 (lower is better) Translates to: PPCGCWKLNSGPLKEQSVMTRMS*TLCSVL Trigger: CAACACTGAACACAAGGTCCATGACATTCTTGTCAT...CACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | CCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGTCCTTTATGTTTTGTTaGACTGAGTCACCAGAACAT | + |
Preference number: 2 (lower is better) Translates to: PPCGCWKLNSGPLKEQSVSFMFC*TESPEH Trigger: ATGTTCTGGTGACTCAGTTCAACAAAACATAAAGGA...CACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | TGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACTGAGCCTTCCAATGAGTTATaGCTGTCTTCTTGCAAGAGA | + |
Preference number: 2 (lower is better) Translates to: WKLNSGPLKEQSVLLTTEPSNEL*LSSCKR Trigger: TCTCTTGCAAGAAGACAGTCATAACTCATTGGAAGG...CTCAGTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | TTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACCAGAACATGAAGATCTaGATGACAAGAATGTCATGG | + |
Preference number: 2 (lower is better) Translates to: LLEIELRTSERTVSALNHQNMKI*MTRMSW Trigger: CCATGACATTCTTGTCATCCAGATCTTCATGTTCTG...GTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR TCA 90 bp | TATAAGTACACTGTGGTTATCTTCAGACACACCAGAAGAGGGCATTGGATCCCATTACGTTATTGCCCTTaGCTCTCAAAATCTGGTTAT | + |
Preference number: 2 (lower is better) Translates to: YKYTVVIFRHTRRGHWIPLRYCP*LSKSGY Trigger: ATAACCAGATTTTGAGAGTCAAGGGCAATAACGTAA...TGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACAGTGTACTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | AAAATCTGGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCTGACTGTGACTTGTCTTGCAAGAGAGCTTaGGAGATCCATTTGCATATC | + |
Preference number: 2 (lower is better) Translates to: KIWLSVVLAGFAVSDCDLSCKRA*EIHLHI Trigger: GATATGCAAATGGATCTCCCAAGCTCTCTTGCAAGA...CAAGTCACAGTCAGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | AAAATCTGGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCTGACTGTGACTTGGAATTTGAGCAGAAGTaGTGGTTTCACCTATGCTCT | + |
Preference number: 2 (lower is better) Translates to: KIWLSVVLAGFAVSDCDLEFEQK*WFHLCS Trigger: AGAGCATAGGTGAAACCACCACTTCTGCTCAAATTC...CAAGTCACAGTCAGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR GCA 90 bp | TTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACCTTGGGAGATCCATTTaGATATCTCCTTTATGTTTT | + |
Preference number: 2 (lower is better) Translates to: LLEIELRTSERTVSALNHLGRSI*ISPLCF Trigger: AAAACATAAAGGAGATATGCAAATGGATCTCCCAAG...GTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CCA 90 bp | CAGAATGTAATGATCAGTTGCCTTCCAATGAGTTATGACTGTCTTCTTGCAAGAAATGAAGCCAGATTATaGAAGATGCCAGAGAGCAGA | + |
Preference number: 2 (lower is better) Translates to: QNVMISCLPMSYDCLLARNEARL*KMPESR Trigger: TCTGCTCTCTGGCATCTTCCATAATCTGGCTTCATT...TCTTGCAAGAAGACAGTCATAACTCATTGGAAGGCAACTGATCATTACATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR GCA 72 bp | CTAGGAGTGGGAAGCGAAGGACCATGCAGAGCCAGGTaGACCCATCCCCAATGCTGGAGATACCCCGTTCTT | + |
Preference number: 3 (lower is better) Translates to: LGVGSEGPCRAR*THPQCWRYPVL Trigger: AAGAACGGGGTATCTCCAGCATTGGGGATGGGTGCACCTGGCTCTGCATGGTCCTTCGCTTCCCACTCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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3UTR CCA 72 bp | TGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGTaGGATTTGGGTATGAGGAGCTGTGGCACAGGCTCA | + |
Preference number: 3 (lower is better) Translates to: CVSTPGRPVLSR*DLGMRSCGTGS Trigger: TGAGCCTGTGCCACAGCTCCTCATACCCAAATCCCACCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | AGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTATaGCACAGAGTCAGCTCTGGGGCACAGATGGAAACC | + |
Preference number: 3 (lower is better) Translates to: SSLPAGFGYGEL*HRVSSGAQMET Trigger: GGTTTCCATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | AGTTCTCTCCCGGTGGGATTTGGGTATGAGGAGCTGTaGCACAGGCTCAGCTCTGGATGTAGACGGAAACTG | + |
Preference number: 3 (lower is better) Translates to: SSLPVGFGYEEL*HRLSSGCRRKL Trigger: CAGTTTCCGTCTACATCCAGAGCTGAGCCTGTGCCACAGCTCCTCATACCCAAATCCCACCGGGAGAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | TGTGGCACAGGCTCAGCTCTGGATGTAGACGGAAACTaGAAGGATCTGTTCACTGGCTGTTCCTTGGTCCCT | + |
Preference number: 3 (lower is better) Translates to: CGTGSALDVDGN*KDLFTGCSLVP Trigger: AGGGACCAAGGAACAGCCAGTGAACAGATCCTTCCAGTTTCCGTCTACATCCAGAGCTGAGCCTGTGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR GCA 72 bp | AACCAGGAATTTGAGCAGAAGTGGTGGTTTCACCTATaGTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGC | + |
Preference number: 3 (lower is better) Translates to: NQEFEQKWWFHL*SQVCQHSWETS Trigger: GCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCACTTCTGCTCAAATTCCTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | ACTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTaGGAGACCAGTTCTCTCCCGGTGGGATTTGGGTAT | + |
Preference number: 3 (lower is better) Translates to: TCSSYKPVCQHS*ETSSLPVGFGY Trigger: ATACCCAAATCCCACCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | ATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCTCTaGGGCACAGATGGAAACCAGAAGCACATGGGTGAT | + |
Preference number: 3 (lower is better) Translates to: IWVWRAMAQSQL*GTDGNQKHMGD Trigger: ATCACCCATGTGCTTCTGGTTTCCATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | CCTTGGTCCCTCTTCAACCAGGAATTTGAGCAGAAGTaGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCAC | + |
Preference number: 3 (lower is better) Translates to: PWSLFNQEFEQK*WFHLCSQVCQH Trigger: GTGCTGACACACCTGAGAGCATAGGTGAAACCACCACTTCTGCTCAAATTCCTGGTTGAAGAGGGACCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | GGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCAGGAAGATACACATGTaGTGTATTAAATGGCCAGCA | + |
Preference number: 3 (lower is better) Translates to: GFTYALRCVSTPGRPALSRKIHM*CIKWPA Trigger: TGCTGGCCATTTAATACACAACATGTGTATCTTCCT...GGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCTCTTCAACCAGGAATTaGAGCAGAAGTGGTGGTTTC | + |
Preference number: 3 (lower is better) Translates to: LVPPISLCVSTPGRPVLSSSTRN*SRSGGF Trigger: GAAACCACCACTTCTGCTCAAATTCCTGGTTGAAGA...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | CCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGTTCACTGGCTGTTCCTaGGTCCCTCTTCAACCAGGA | + |
Preference number: 3 (lower is better) Translates to: PPCGCWKLNSGPLKEQSVFTGCS*VPLQPG Trigger: TCCTGGTTGAAGAGGGACCAAGGAACAGCCAGTGAA...CACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR TCA 72 bp | ACTGGCTGTTCCTTGGTCCCTCTTCAACCAGGAATTTaGGCAGAAGTGGTGGTTTCACCTATGCTCTCAGGT | + |
Preference number: 3 (lower is better) Translates to: TGCSLVPLQPGI*AEVVVSPMLSG Trigger: ACCTGAGAGCATAGGTGAAACCACCACTTCTGCTCAAATTCCTGGTTGAAGAGGGACCAAGGAACAGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | ACGGAAACTGGAAGGATCTGTTCACTGGCTGTTCCTTaGTCCCTCTTCAACCAGGAATTTGAGCAGAAGTGG | + |
Preference number: 3 (lower is better) Translates to: TETGRICSLAVP*SLFNQEFEQKW Trigger: CCACTTCTGCTCAAATTCCTGGTTGAAGAGGGACCAAGGAACAGCCAGTGAACAGATCCTTCCAGTTTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCTTCTTGCAAGAGAGCTaGGGAGATCCATTTGCATAT | + |
Preference number: 3 (lower is better) Translates to: LVPPISLCVSTPGRPVLSFLQES*GDPFAY Trigger: ATATGCAAATGGATCTCCCAAGCTCTCTTGCAAGAA...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | ACTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCTCTTCAACCAGGAATTaGAGCAGAAGTGGTGGTTTC | + |
Preference number: 3 (lower is better) Translates to: TCSSYKPVCQHSWETSSLSSTRN*SRSGGF Trigger: GAAACCACCACTTCTGCTCAAATTCCTGGTTGAAGA...GAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | GACACACCAGAAGAGGGCATTGGATCCCATTACATATaGTTGTGGGCCACCATGTGGTTGCTGGAAATTGAA | + |
Preference number: 3 (lower is better) Translates to: DTPEEGIGSHYI*LWATMWLLEIE Trigger: TTCAATTTCCAGCAACCACATGGTGGCCCACAACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | ACTGTGGTTATCTTCAGACACACCAGAAGAGGGCATTaGATCCCATTACATATGGTTGTGGGCCACCATGTG | + |
Preference number: 3 (lower is better) Translates to: TVVIFRHTRRGH*IPLHMVVGHHV Trigger: CACATGGTGGCCCACAACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | TATAAGTACACTGTGGTTATCTTCAGACACACCAGAAGAGGGCATTGGATCCCATGGGCCACCATGTGGTaGCTGGAAATTGAACTCAGG | + |
Preference number: 3 (lower is better) Translates to: YKYTVVIFRHTRRGHWIPWATMW*LEIELR Trigger: CCTGAGTTCAATTTCCAGCAACCACATGGTGGCCCA...TGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACAGTGTACTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | TGGGCCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGGAAGATACACATGTaGTGTATTAAATGGCCAGCA | + |
Preference number: 3 (lower is better) Translates to: WATMWLLEIELRTSERTVRKIHM*CIKWPA Trigger: TGCTGGCCATTTAATACACAACATGTGTATCTTCCT...GACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | CCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGGCTTGGGAGATCCATTaGCATATCTCCTTTATGTTT | + |
Preference number: 3 (lower is better) Translates to: PPCGCWKLNSGPLKEQSVAWEIH*HISFMF Trigger: AAACATAAAGGAGATATGCAAATGGATCTCCCAAGC...CACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR TCA 72 bp | AATCCATGTAGGATTCTGGGACTCACTGTGACTTGGTaGTTGTCTAGCAGATGTCTGAAAAATGTGGACCCA | + |
Preference number: 3 (lower is better) Translates to: NPCRILGLTVTW*LSSRCLKNVDP Trigger: TGGGTCCACATTTTTCAGACATCTGCTAGACAATCACCAAGTCACAGTGAGTCCCAGAATCCTACATGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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3UTR-3UTR CAA 90 bp | TTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACTTCTTGCAAGAGAGCTaGGGAGATCCATTTGCATAT | + |
Preference number: 3 (lower is better) Translates to: LLEIELRTSERTVSALNHFLQES*GDPFAY Trigger: ATATGCAAATGGATCTCCCAAGCTCTCTTGCAAGAA...GTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR-3UTR CAA 90 bp | TGTGGTTATCTTCAGACACACCAGAAGAGGGCATTGGATCCCATTACATATGGTCTGTTGCTTACGTTATaGCCCTTGACTCTCAAAATC | + |
Preference number: 3 (lower is better) Translates to: CGYLQTHQKRALDPITYGLLLTL*PLTLKI Trigger: GATTTTGAGAGTCAAGGGCAATAACGTAAGCAACAG...ACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR TCA 72 bp | CAGTGTTGTTCATGGGCAGCTTTTTGGTTGAATGAATaGACCACAGCAAATGAAGCCAGATTATGGAAGATG | + |
Preference number: 3 (lower is better) Translates to: QCCSWAAFWLNE*TTANEARLWKM Trigger: CATCTTCCATAATCTGGCTTCATTTGCTGTGGTTCATTCATTCAACCAAAAAGCTGCCCATGAACAACACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR TCA 72 bp | TCAGAATGTAATGATCAGTTGCCTTCCAATGAGTTATaGCTGTCTTCTTGCAAGAGAGCTTGGGAGATCCAT | + |
Preference number: 3 (lower is better) Translates to: SECNDQLPSNEL*LSSCKRAWEIH Trigger: ATGGATCTCCCAAGCTCTCTTGCAAGAAGACAGTCATAACTCATTGGAAGGCAACTGATCATTACATTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR GCA 72 bp | AATGAACCACAGCAAATGAAGCCAGATTATGGAAGATaGCAGAGAGCAGAAAGGAAGATACACATGTTGTGT | + |
Preference number: 3 (lower is better) Translates to: NEPQQMKPDYGR*QRAERKIHMLC Trigger: ACACAACATGTGTATCTTCCTTTCTGCTCTCTGGCATCTTCCATAATCTGGCTTCATTTGCTGTGGTTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CCA 72 bp | CTGTTGCTTACGTTATTGCCCTTGACTCTCAAAATCTaGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCT | + |
Preference number: 3 (lower is better) Translates to: LLLTLLPLTLKI*LSVVLAGFAVS Trigger: AGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTTGAGAGTCAAGGGCAATAACGTAAGCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | GTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGAATGCCCGGACCCCCTaGGGCCCCAGGCCACGGTGC | + |
Preference number: 4 (lower is better) Translates to: VPPISLCVSTPGRPVLSRNARTP*GPRPRC Trigger: GCACCGTGGCCTGGGGCCCCAGGGGGTCCGGGCATT...CCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCAATGCCCGGACCCCCTaGGGCCCCAGGCCACGGTGC | + |
Preference number: 4 (lower is better) Translates to: LVPPISLCVSTPGRPVLSNARTP*GPRPRC Trigger: GCACCGTGGCCTGGGGCCCCAGGGGGTCCGGGCATT...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | GGACCATGCAGAGCCAGGTGCACCCATCCCCAATGCTGGAGATACCCCGTTCTTATCAGCCAGAGCCTCTaGTCCAGCACCACAGAGCCC | + |
Preference number: 4 (lower is better) Translates to: GPCRARCTHPQCWRYPVLISQSL*SSTTEP Trigger: GGGCTCTGTGGTGCTGGAGCAGAGGCTCTGGCTGAT...AAGAACGGGGTATCTCCAGCATTGGGGATGGGTGCACCTGGCTCTGCATGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR CCA 90 bp | AGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCTCTGGGGCACAGATCTCGGGCAAACGCGGTaGCTCCCAGACCTCGCAGGT | + |
Preference number: 4 (lower is better) Translates to: SGIWVWRAMAQSQLWGTDLGQTR*LPDLAG Trigger: ACCTGCGAGGTCTGGGAGCCACCGCGTTTGCCCGAG...ATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CAA 72 bp | AGCACTCCTGGGAGACCAGTTCTCTCCCGGTGGGATTaGGGTATGAGGAGCTGTGGCACAGGCTCAGCTCTG | + |
Preference number: 4 (lower is better) Translates to: STPGRPVLSRWD*GMRSCGTGSAL Trigger: CAGAGCTGAGCCTGTGCCACAGCTCCTCATACCCAAATCCCACCGGGAGAGAACTGGTCTCCCAGGAGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | GACCAGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGGGCCCCAGGCCACGGTaGCGAAGGTTCAATTCAGAG | + |
Preference number: 4 (lower is better) Translates to: DQLSPSGIWVWRAMAQSQGPRPR*RRFNSE Trigger: CTCTGAATTGAACCTTCGGCACCGTGGCCTGGGGCC...CTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | CCAGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCTATCAGCCAGAGCCTCTaGTCCAGCACCACAGAGCCC | + |
Preference number: 4 (lower is better) Translates to: PALSQRDLGMESYGTESAISQSL*SSTTEP Trigger: GGGCTCTGTGGTGCTGGAGCAGAGGCTCTGGCTGAT...AGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | AGGAGTGGGAAGCGAAGGACCATGCAGAGCCAGGTGCACCCATCCCCAATGCTGCCTGCAGCTCCAATCTaGTTCTCTGACAGGTCCACA | + |
Preference number: 4 (lower is better) Translates to: RSGKRRTMQSQVHPSPMLPAAPI*FSDRST Trigger: TGTGGACCTGTCAGAGAATCAGATTGGAGCTGCAGG...CAGCATTGGGGATGGGTGCACCTGGCTCTGCATGGTCCTTCGCTTCCCACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR GCA 90 bp | AGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCTCTGGGGCACAGATGGCCCCAGGCCACGGTaGCGAAGGTTCAATTCAGAG | + |
Preference number: 4 (lower is better) Translates to: SGIWVWRAMAQSQLWGTDGPRPR*RRFNSE Trigger: CTCTGAATTGAACCTTCGGCACCGTGGCCTGGGGCC...ATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | TGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGCAGTGCAGATCGCCTaGAGCCCTGCAGCTCCAATC | + |
Preference number: 4 (lower is better) Translates to: CSSYKPVCQHSWETSSLPAVQIA*SPAAPI Trigger: GATTGGAGCTGCAGGGCTCCAGGCGATCTGCACTGC...CGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | TTGGAGATGGTTCGGTGGCTAGGAACACTGGCTTCTCTTCCAGAGAACCTGAATCTCGGGCAAACGCGGTaGCTCCCAGACCTCGCAGGT | + |
Preference number: 4 (lower is better) Translates to: LEMVRWLGTLASLPENLNLGQTR*LPDLAG Trigger: ACCTGCGAGGTCTGGGAGCCACCGCGTTTGCCCGAG...ATTCAGGTTCTCTGGAAGAGAAGCCAGTGTTCCTAGCCACCGAACCATCTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR CCA 90 bp | GGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCACTTGGTGCAGATGCTaGCTGGGATGGTGTAGAGGC | + |
Preference number: 4 (lower is better) Translates to: GFTYALRCVSTPGRPALSTWCRC*LGWCRG Trigger: GCCTCTACACCATCCCAGCCAGCATCTGCACCAAGT...GGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | GTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGTTCCAGAGCAGAGTGTaGATCTGCAGTCCAGGACCT | + |
Preference number: 4 (lower is better) Translates to: VPPISLCVSTPGRPVLSRFQSRV*ICSPGP Trigger: AGGTCCTGGACTGCAGATTCACACTCTGCTCTGGAA...CCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | ACTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCATCAGCCAGAGCCTCTaGTCCAGCACCACAGAGCCC | + |
Preference number: 4 (lower is better) Translates to: TCSSYKPVCQHSWETSSLISQSL*SSTTEP Trigger: GGGCTCTGTGGTGCTGGAGCAGAGGCTCTGGCTGAT...GAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | AGGAGTGGGAAGCGAAGGACCATGCAGAGCCAGGTGCACCCATCCCCAATGCTGGAGTCCTGTGTTTTCTaGCACAGCAGGTCCAAGTAT | + |
Preference number: 4 (lower is better) Translates to: RSGKRRTMQSQVHPSPMLESCVF*HSRSKY Trigger: ATACTTGGACCTGCTGTGGCAGAAAACACAGGACTC...CAGCATTGGGGATGGGTGCACCTGGCTCTGCATGGTCCTTCGCTTCCCACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR CCA 90 bp | AGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCTCTGGGGCACAGATCGTTCTCCAAGCCCATaGGTGCCTTCTGCTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: SGIWVWRAMAQSQLWGTDRSPSP*VPSASR Trigger: TCTGGAAGCAGAAGGCACCCATGGGCTTGGAGAACG...ATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | CCTGAATTCAGTTCTCAGCATCTACAAAGTGGGTTTCAACTGCCTGTAACACAAAATGCCCGGACCCCCTaGGGCCCCAGGCCACGGTGC | + |
Preference number: 4 (lower is better) Translates to: PEFSSQHLQSGFQLPVTQNARTP*GPRPRC Trigger: GCACCGTGGCCTGGGGCCCCAGGGGGTCCGGGCATT...TTGTGTTACAGGCAGTTGAAACCCACTTTGTAGATGCTGAGAACTGAATTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR CCA 90 bp | AGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCTCTGGGGCACAGATAGATGCTGGCTGGGATaGTGTAGAGGCTTGTGGCCA | + |
Preference number: 4 (lower is better) Translates to: SGIWVWRAMAQSQLWGTDRCWLG*CRGLWP Trigger: TGGCCACAAGCCTCTACACCATCCCAGCCAGCATCT...ATCTGTGCCCCAGAGCTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | TGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGTTCCAGAGCAGAGTGTaGATCTGCAGTCCAGGACCT | + |
Preference number: 4 (lower is better) Translates to: CSSYKPVCQHSWETSSLPFQSRV*ICSPGP Trigger: AGGTCCTGGACTGCAGATTCACACTCTGCTCTGGAA...CGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | GACAGCACCCACAGTCCCAGCACTCAGGAGGTAAGAACAGGAGGATTAACAGTTCTCCAAGCCCATGGGTaGCTTCTGCTTCCAGAGCAG | + |
Preference number: 4 (lower is better) Translates to: DSTHSPSTQEVRTGGLTVLQAHG*LLLPEQ Trigger: CTGCTCTGGAAGCAGAAGGCACCCATGGGCTTGGAG...AACTGTTAATCCTCCTGTTCTTACCTCCTGAGTGCTGGGACTGTGGGTGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR GCA 90 bp | ACTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCAGAAGAGCAGCGAGGTaGTGGGCTGCTTGTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: TCSSYKPVCQHSWETSSLRRAAR*WAACSS Trigger: GGAGGAACAAGCAGCCCAGCACCTCGCTGCTCTTCT...GAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | CTGGATGACAAGAATGTCATGGACCTTGTGTTCAGTGTTGTTCATGGGCAGCTTCTCGGGCAAACGCGGTaGCTCCCAGACCTCGCAGGT | + |
Preference number: 4 (lower is better) Translates to: LDDKNVMDLVFSVVHGQLLGQTR*LPDLAG Trigger: ACCTGCGAGGTCTGGGAGCCACCGCGTTTGCCCGAG...AAGCTGCCCATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCGGTGCAGATGCTGGCTaGGATGGTGTAGAGGCTTGT | + |
Preference number: 4 (lower is better) Translates to: LVPPISLCVSTPGRPVLSGADAG*DGVEAC Trigger: ACAAGCCTCTACACCATCCCAGCCAGCATCTGCACC...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | ACCCACAGTCCCAGCACTCAGGAGGTAAGAACAGGAGGATTAACAGTTCCACACGATCGCCTGGAGCCCTaGAGCTCCAATCTGATTCTC | + |
Preference number: 4 (lower is better) Translates to: THSPSTQEVRTGGLTVPHDRLEP*SSNLIL Trigger: GAGAATCAGATTGGAGCTGCAGGGCTCCAGGCGATC...GTGTGGAACTGTTAATCCTCCTGTTCTTACCTCCTGAGTGCTGGGACTGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR GCA 90 bp | GGACCATGCAGAGCCAGGTGCACCCATCCCCAATGCTGGAGATACCCCGTTCTTTCCAAGTATCTCTCCTaGCAGGTCATTGAGCTGATT | + |
Preference number: 4 (lower is better) Translates to: GPCRARCTHPQCWRYPVLSKYLS*QVIELI Trigger: AATCAGCTCAATGACCTGGCAGGAGAGATACTTGGA...AAGAACGGGGTATCTCCAGCATTGGGGATGGGTGCACCTGGCTCTGCATGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR GCA 90 bp | GTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGGAGTCCTGTGTTTTCTaGCACAGCAGGTCCAAGTAT | + |
Preference number: 4 (lower is better) Translates to: VPPISLCVSTPGRPVLSRESCVF*HSRSKY Trigger: ATACTTGGACCTGCTGTGGCAGAAAACACAGGACTC...CCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | TGGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTGGCACAACACTATTaGCCCGGCAAGACTTCAGAT | + |
Preference number: 4 (lower is better) Translates to: WWFHLCSQVCQHSWETSSLAQHY*PGKTSD Trigger: ATCTGAAGTCTTGCCGGGCCAATAGTGTTGTGCCAG...AGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | GGATGTAGACGGAAACTGGAAGGATCTGTTCACTGGCTGTTCCTTGGTCCCTCTACTTGGTGCAGATGCTaGCTGGGATGGTGTAGAGGC | + |
Preference number: 4 (lower is better) Translates to: GCRRKLEGSVHWLFLGPSTWCRC*LGWCRG Trigger: GCCTCTACACCATCCCAGCCAGCATCTGCACCAAGT...AGAGGGACCAAGGAACAGCCAGTGAACAGATCCTTCCAGTTTCCGTCTACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | GTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGTCCAATCTGATTCTCTaGCAGGTCCACATCAGAGAT | + |
Preference number: 4 (lower is better) Translates to: VPPISLCVSTPGRPVLSRSNLIL*QVHIRD Trigger: ATCTCTGATGTGGACCTGTCAGAGAATCAGATTGGA...CCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCTGTTCCCTTGCAGCTaGATCTTCTCAACAGTTGGG | + |
Preference number: 4 (lower is better) Translates to: LVPPISLCVSTPGRPVLSLFPCS*IFSTVG Trigger: CCCAACTGTTGAGAAGATGCAGCTGCAAGGGAACAG...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | CATTTGGCTCTTTCCTTTCAGTCTCTGCTATTACTGTGTCTAGGGTCCCCTCTCAGAAGAGCAGCGAGGTaGTGGGCTGCTTGTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: HLALSFQSLLLLCLGSPLRRAAR*WAACSS Trigger: GGAGGAACAAGCAGCCCAGCACCTCGCTGCTCTTCT...GAGAGGGGACCCTAGACACAGTAATAGCAGAGACTGAAAGGAAAGAGCCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR CCA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCTGGCACAACACTATTaGCCCGGCAAGACTTCAGAT | + |
Preference number: 4 (lower is better) Translates to: LVPPISLCVSTPGRPVLSLAQHY*PGKTSD Trigger: ATCTGAAGTCTTGCCGGGCCAATAGTGTTGTGCCAG...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | GTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGTGGTGTAGAGGCTTGTaGCCAGTCTTTTCTTCTAGA | + |
Preference number: 4 (lower is better) Translates to: VPPISLCVSTPGRPVLSRWCRGL*PVFSSR Trigger: TCTAGAAGAAAAGACTGGCCACAAGCCTCTACACCA...CCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | TGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGTCCAAGTATCTCTCCTaGCAGGTCATTGAGCTGATT | + |
Preference number: 4 (lower is better) Translates to: CSSYKPVCQHSWETSSLPSKYLS*QVIELI Trigger: AATCAGCTCAATGACCTGGCAGGAGAGATACTTGGA...CGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | TGGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTTCCAAGTATCTCTCCTaGCAGGTCATTGAGCTGATT | + |
Preference number: 4 (lower is better) Translates to: WWFHLCSQVCQHSWETSSSKYLS*QVIELI Trigger: AATCAGCTCAATGACCTGGCAGGAGAGATACTTGGA...AGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | GGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCGGTCCTCACATTCTCTaGTTACTTGGATATCAGACA | + |
Preference number: 4 (lower is better) Translates to: GFTYALRCVSTPGRPALSGPHIL*LLGYQT Trigger: TGTCTGATATCCAAGTAAGCAGAGAATGTGAGGACC...GGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | TGTGGTTATCTTCAGACACACCAGAAGAGGGCATTGGATCCCATTACATATGGTGCAGTGCAGATCGCCTaGAGCCCTGCAGCTCCAATC | + |
Preference number: 4 (lower is better) Translates to: CGYLQTHQKRALDPITYGAVQIA*SPAAPI Trigger: GATTGGAGCTGCAGGGCTCCAGGCGATCTGCACTGC...ACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CAA 72 bp | CACTGGCTGTTCCTTGGTCCCTCTTCAACCAGGAATTaGAGCAGAAGTGGTGGTTTCACCTATGCTCTCAGG | + |
Preference number: 4 (lower is better) Translates to: HWLFLGPSSTRN*SRSGGFTYALR Trigger: CCTGAGAGCATAGGTGAAACCACCACTTCTGCTCAAATTCCTGGTTGAAGAGGGACCAAGGAACAGCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCTCCAATCTGATTCTCTaGCAGGTCCACATCAGAGAT | + |
Preference number: 4 (lower is better) Translates to: LVPPISLCVSTPGRPVLSSNLIL*QVHIRD Trigger: ATCTCTGATGTGGACCTGTCAGAGAATCAGATTGGA...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | TGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACTGAGCTCCAAGCCCATGGGTaGCTTCTGCTTCCAGAGCAG | + |
Preference number: 4 (lower is better) Translates to: WKLNSGPLKEQSVLLTTELQAHG*LLLPEQ Trigger: CTGCTCTGGAAGCAGAAGGCACCCATGGGCTTGGAG...CTCAGTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | CTGGATGACAAGAATGTCATGGACCTTGTGTTCAGTGTTGTTCATGGGCAGCTTGATCGCCTGGAGCCCTaGAGCTCCAATCTGATTCTC | + |
Preference number: 4 (lower is better) Translates to: LDDKNVMDLVFSVVHGQLDRLEP*SSNLIL Trigger: GAGAATCAGATTGGAGCTGCAGGGCTCCAGGCGATC...AAGCTGCCCATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | CCTGAATTCAGTTCTCAGCATCTACAAAGTGGGTTTCAACTGCCTGTAACACAAGCAGTGCAGATCGCCTaGAGCCCTGCAGCTCCAATC | + |
Preference number: 4 (lower is better) Translates to: PEFSSQHLQSGFQLPVTQAVQIA*SPAAPI Trigger: GATTGGAGCTGCAGGGCTCCAGGCGATCTGCACTGC...TTGTGTTACAGGCAGTTGAAACCCACTTTGTAGATGCTGAGAACTGAATTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR GCA 90 bp | CTACAAAGTGGGTTTCAACTGCCTGTAACACAAGTCTCAGGGGATCTGACACCTCTGTTCCCTTGCAGCTaGATCTTCTCAACAGTTGGG | + |
Preference number: 4 (lower is better) Translates to: LQSGFQLPVTQVSGDLTPLFPCS*IFSTVG Trigger: CCCAACTGTTGAGAAGATGCAGCTGCAAGGGAACAG...AGGTGTCAGATCCCCTGAGACTTGTGTTACAGGCAGTTGAAACCCACTTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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3UTR CAA 72 bp | ACACCAGAAGAGGGCATTGGATCCCATTACATATGGTaGTGGGCCACCATGTGGTTGCTGGAAATTGAACTC | + |
Preference number: 4 (lower is better) Translates to: TPEEGIGSHYIW*WATMWLLEIEL Trigger: GAGTTCAATTTCCAGCAACCACATGGTGGCCCACAACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CAA 72 bp | CACTGTGGTTATCTTCAGACACACCAGAAGAGGGCATaGGATCCCATTACATATGGTTGTGGGCCACCATGT | + |
Preference number: 4 (lower is better) Translates to: HCGYLQTHQKRA*DPITYGCGPPC Trigger: ACATGGTGGCCCACAACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | TATAAGTACACTGTGGTTATCTTCAGACACACCAGAAGAGGGCATTGGATCCCACCTGCAGCTCCAATCTaGTTCTCTGACAGGTCCACA | + |
Preference number: 4 (lower is better) Translates to: YKYTVVIFRHTRRGHWIPPAAPI*FSDRST Trigger: TGTGGACCTGTCAGAGAATCAGATTGGAGCTGCAGG...TGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACAGTGTACTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | CATGAAGATCTGGATGACAAGAATGTCATGGACCTTGTGTTCAGTGTTGTTCATCTCCAAGCCCATGGGTaGCTTCTGCTTCCAGAGCAG | + |
Preference number: 4 (lower is better) Translates to: HEDLDDKNVMDLVFSVVHLQAHG*LLLPEQ Trigger: CTGCTCTGGAAGCAGAAGGCACCCATGGGCTTGGAG...ATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAGATCTTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | ATGAATGAACCACAGCAAATGAAGCCAGATTATGGAAGATGCCAGAGAGCAGAACGTTCTCCAAGCCCATaGGTGCCTTCTGCTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: MNEPQQMKPDYGRCQRAERSPSP*VPSASR Trigger: TCTGGAAGCAGAAGGCACCCATGGGCTTGGAGAACG...TTCTGCTCTCTGGCATCTTCCATAATCTGGCTTCATTTGCTGTGGTTCATTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | GGTAAGAACAGGAGGATTAACAGTTCCACACTAATTACCAAGTTAAGAGGCCAGTTCCAGAGCAGAGTGTaGATCTGCAGTCCAGGACCT | + |
Preference number: 4 (lower is better) Translates to: GKNRRINSSTLITKLRGQFQSRV*ICSPGP Trigger: AGGTCCTGGACTGCAGATTCACACTCTGCTCTGGAA...CTGGCCTCTTAACTTGGTAATTAGTGTGGAACTGTTAATCCTCCTGTTCTTACC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR GCA 90 bp | CATGAAGATCTGGATGACAAGAATGTCATGGACCTTGTGTTCAGTGTTGTTCATGATCGCCTGGAGCCCTaGAGCTCCAATCTGATTCTC | + |
Preference number: 4 (lower is better) Translates to: HEDLDDKNVMDLVFSVVHDRLEP*SSNLIL Trigger: GAGAATCAGATTGGAGCTGCAGGGCTCCAGGCGATC...ATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAGATCTTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | CAGAATGTAATGATCAGTTGCCTTCCAATGAGTTATGACTGTCTTCTTGCAAGAAGAAGAGCAGCGAGGTaGTGGGCTGCTTGTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: QNVMISCLPMSYDCLLARRRAAR*WAACSS Trigger: GGAGGAACAAGCAGCCCAGCACCTCGCTGCTCTTCT...TCTTGCAAGAAGACAGTCATAACTCATTGGAAGGCAACTGATCATTACATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | CACTCAGGAGGTAAGAACAGGAGGATTAACAGTTCCACACTAATTACCAAGTTACGTTCTCCAAGCCCATaGGTGCCTTCTGCTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: HSGGKNRRINSSTLITKLRSPSP*VPSASR Trigger: TCTGGAAGCAGAAGGCACCCATGGGCTTGGAGAACG...TAACTTGGTAATTAGTGTGGAACTGTTAATCCTCCTGTTCTTACCTCCTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR CCA 90 bp | AAAATCTGGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCTGACTGTGACTTGAGATGCTGGCTGGGATaGTGTAGAGGCTTGTGGCCA | + |
Preference number: 4 (lower is better) Translates to: KIWLSVVLAGFAVSDCDLRCWLG*CRGLWP Trigger: TGGCCACAAGCCTCTACACCATCCCAGCCAGCATCT...CAAGTCACAGTCAGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | CATGAAGATCTGGATGACAAGAATGTCATGGACCTTGTGTTCAGTGTTGTTCATGGTGCAGATGCTGGCTaGGATGGTGTAGAGGCTTGT | + |
Preference number: 4 (lower is better) Translates to: HEDLDDKNVMDLVFSVVHGADAG*DGVEAC Trigger: ACAAGCCTCTACACCATCCCAGCCAGCATCTGCACC...ATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAGATCTTCATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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3UTR CAA 72 bp | GGATCCCATTACATATGGTTGTGGGCCACCATGTGGTaGCTGGAAATTGAACTCAGGACCTCTGAAAGAACA | + |
Preference number: 4 (lower is better) Translates to: GSHYIWLWATMW*LEIELRTSERT Trigger: TGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCCCACAACCATATGTAATGGGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | CTACAAAGTGGGTTTCAACTGCCTGTAACACAAGTCTCAGGGGATCTGACACCTTCTCCAAAGCCATTATaGGAGATGTCTAGGACTTTC | + |
Preference number: 4 (lower is better) Translates to: LQSGFQLPVTQVSGDLTPSPKPL*EMSRTF Trigger: GAAAGTCCTAGACATCTCTCATAATGGCTTTGGAGA...AGGTGTCAGATCCCCTGAGACTTGTGTTACAGGCAGTTGAAACCCACTTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR GCA 90 bp | TTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACGAGTCCTGTGTTTTCTaGCACAGCAGGTCCAAGTAT | + |
Preference number: 4 (lower is better) Translates to: LLEIELRTSERTVSALNHESCVF*HSRSKY Trigger: ATACTTGGACCTGCTGTGGCAGAAAACACAGGACTC...GTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | CAGAATGTAATGATCAGTTGCCTTCCAATGAGTTATGACTGTCTTCTTGCAAGAACCAGAGTCACTTGGTaGAGATGCTGGCTGGGATGG | + |
Preference number: 4 (lower is better) Translates to: QNVMISCLPMSYDCLLARTRVTW*RCWLGW Trigger: CCATCCCAGCCAGCATCTGCACCAAGTGACTCTGGT...TCTTGCAAGAAGACAGTCATAACTCATTGGAAGGCAACTGATCATTACATTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | CAGAATGTAATGATCAGTTGCCTTCCAATGAGTTATGACTGTCTTCTTGCAAGACCTGCAGCTCCAATCTaGTTCTCTGACAGGTCCACA | + |
Preference number: 4 (lower is better) Translates to: QNVMISCLPMSYDCLLARPAAPI*FSDRST Trigger: TGTGGACCTGTCAGAGAATCAGATTGGAGCTGCAGG...TCTTGCAAGAAGACAGTCATAACTCATTGGAAGGCAACTGATCATTACATTCTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR GCA 90 bp | AAAATCTGGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCTGACTGTGACTTGCTGTTCCCTTGCAGCTaGATCTTCTCAACAGTTGGG | + |
Preference number: 4 (lower is better) Translates to: KIWLSVVLAGFAVSDCDLLFPCS*IFSTVG Trigger: CCCAACTGTTGAGAAGATGCAGCTGCAAGGGAACAG...CAAGTCACAGTCAGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CCA 90 bp | TGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACTGAGTGGTGTAGAGGCTTGTaGCCAGTCTTTTCTTCTAGA | + |
Preference number: 4 (lower is better) Translates to: WKLNSGPLKEQSVLLTTEWCRGL*PVFSSR Trigger: TCTAGAAGAAAAGACTGGCCACAAGCCTCTACACCA...CTCAGTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | TGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACTGAGTCTCCAAAGCCATTATaGGAGATGTCTAGGACTTTC | + |
Preference number: 4 (lower is better) Translates to: WKLNSGPLKEQSVLLTTESPKPL*EMSRTF Trigger: GAAAGTCCTAGACATCTCTCATAATGGCTTTGGAGA...CTCAGTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR TCA 90 bp | TGTGGTTATCTTCAGACACACCAGAAGAGGGCATTGGATCCCATTACATATGGTTCTCCAAAGCCATTATaGGAGATGTCTAGGACTTTC | + |
Preference number: 4 (lower is better) Translates to: CGYLQTHQKRALDPITYGSPKPL*EMSRTF Trigger: GAAAGTCCTAGACATCTCTCATAATGGCTTTGGAGA...ACCATATGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAAGATAACCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | AGGACCATGCAGAGCCAGGTGCACCCATCCCCAATGCTGGAGATACCCCGTTCTGAGGTGCTGGGCTGCTaGTTCCTCCAGCCTGTTCCC | + |
Preference number: 5 (lower is better) Translates to: RTMQSQVHPSPMLEIPRSEVLGC*FLQPVP Trigger: GGGAACAGGCTGGAGGAACAAGCAGCCCAGCACCTC...AGAACGGGGTATCTCCAGCATTGGGGATGGGTGCACCTGGCTCTGCATGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS TCA 90 bp | CCGTTCTCCAAGCCCATGGGTGCCTTCTGCTTCCAGAGCAGAGTGTaGATCTGCAGTCCAGGACCTTTCGGCCTCCAGGGTCTCTGCCTG | + |
Preference number: 5 (lower is better) Translates to: PFSKPMGAFCFQSRV*ICSPGPFGLQGLCL Trigger: CAGGCAGAGACCCTGGAGGCCGAAAGGTCCTGGACTGCAGATTCACACTCTGCTCTGGAAGCAGAAGGCACCCATGGGCTTGGAGAACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS TCA 90 bp | GCCTCCAGGCCTCGGGCAAACGCGGTGGCTCCCAGACCTCGCAGGTaGTTCCAACTGAGGTTAAGCTCTGTGAGTCCTGTGTTTTCTGCC | + |
Preference number: 5 (lower is better) Translates to: ASRPRANAVAPRPRR*FQLRLSSVSPVFSA Trigger: GGCAGAAAACACAGGACTCACAGAGCTTAACCTCAGTTGGAATCACCTGCGAGGTCTGGGAGCCACCGCGTTTGCCCGAGGCCTGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS-3UTR CAA 90 bp | GACCAGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGGAGGTGCTGGGCTGCTaGTTCCTCCAGCCTGTTCCC | + |
Preference number: 5 (lower is better) Translates to: DQLSPSGIWVWRAMAQSQEVLGC*FLQPVP Trigger: GGGAACAGGCTGGAGGAACAAGCAGCCCAGCACCTC...CTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | GGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTCCAGAGACCAGAGTCACTaGGTGCAGATGCTGGCTGGG | + |
Preference number: 5 (lower is better) Translates to: GFTYALRCVSTPGRPALSRDQSH*VQMLAG Trigger: CCCAGCCAGCATCTGCACCAAGTGACTCTGGTCTCT...GGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | GACCAGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGCTCCAGCCTGTTCCCTaGCAGCTGCATCTTCTCAAC | + |
Preference number: 5 (lower is better) Translates to: DQLSPSGIWVWRAMAQSQLQPVP*QLHLLN Trigger: GTTGAGAAGATGCAGCTGCAAGGGAACAGGCTGGAG...CTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | GGATGTAGACGGAAACTGGAAGGATCTGTTCACTGGCTGTTCCTTGGTCCCTCTGCACCACAGAGCCCATaGTCCCGAAGATCCAGACGC | + |
Preference number: 5 (lower is better) Translates to: GCRRKLEGSVHWLFLGPSAPQSP*SRRSRR Trigger: GCGTCTGGATCTTCGGGACAATGGGCTCTGTGGTGC...AGAGGGACCAAGGAACAGCCAGTGAACAGATCCTTCCAGTTTCCGTCTACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | AGTCTCAGGGGATCTGACACCTTCTTCTTGCCCCCAAGGGTACCGGGCATACATCTCCAGCCTGTTCCCTaGCAGCTGCATCTTCTCAAC | + |
Preference number: 5 (lower is better) Translates to: SLRGSDTFFLPPRVPGIHLQPVP*QLHLLN Trigger: GTTGAGAAGATGCAGCTGCAAGGGAACAGGCTGGAG...ATGTATGCCCGGTACCCTTGGGGGCAAGAAGAAGGTGTCAGATCCCCTGAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS TCA 90 bp | GGCAGTGCAGATCGCCTGGAGCCCTGCAGCTCCAATCTGATTCTCTaGCAGGTCCACATCAGAGATAATGCTGTTCTTACGCAGGACATC | + |
Preference number: 5 (lower is better) Translates to: GSADRLEPCSSNLIL*QVHIRDNAVLTQDI Trigger: GATGTCCTGCGTAAGAACAGCATTATCTCTGATGTGGACCTGTCAGAGAATCAGATTGGAGCTGCAGGGCTCCAGGCGATCTGCACTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS GCA 90 bp | ATCAGAGATAATGCTGTTCTTACGCAGGACATCAGCCAGAGCCTCTaGTCCAGCACCACAGAGCCCATTGTCCCGAAGATCCAGACGCTT | + |
Preference number: 5 (lower is better) Translates to: IRDNAVLTQDISQSL*SSTTEPIVPKIQTL Trigger: AAGCGTCTGGATCTTCGGGACAATGGGCTCTGTGGTGCTGGAGCAGAGGCTCTGGCTGATGTCCTGCGTAAGAACAGCATTATCTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS GCA 90 bp | CTTGCAGCTGCATCTTCTCAACAGTTGGGTTTAAGGCAAGGGCAGTaGAGATCGCCTGGAGCCCTGCAGCTCCAATCTGATTCTCTGACA | + |
Preference number: 5 (lower is better) Translates to: LAAASSQQLGLRQGQ*RSPGALQLQSDSLT Trigger: TGTCAGAGAATCAGATTGGAGCTGCAGGGCTCCAGGCGATCTGCACTGCCCTTGCCTTAAACCCAACTGTTGAGAAGATGCAGCTGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS-3UTR CAA 90 bp | CTTGTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCACTGGCACAACACTATaGGCCCGGCAAGACTTCAGA | + |
Preference number: 5 (lower is better) Translates to: LVPPISLCVSTPGRPVLSTGTTL*ARQDFR Trigger: TCTGAAGTCTTGCCGGGCCAATAGTGTTGTGCCAGT...GGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | CCACCATGTGGTTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGAGAGACCAGAGTCACTaGGTGCAGATGCTGGCTGGG | + |
Preference number: 5 (lower is better) Translates to: PPCGCWKLNSGPLKEQSVRDQSH*VQMLAG Trigger: CCCAGCCAGCATCTGCACCAAGTGACTCTGGTCTCT...CACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS GCA 90 bp | CAGGTGATTCCAACTGAGGTTAAGCTCTGTGAGTCCTGTGTTTTCTaGCACAGCAGGTCCAAGTATCTCTCCTGCCAGGTCATTGAGCTG | + |
Preference number: 5 (lower is better) Translates to: QVIPTEVKLCESCVF*HSRSKYLSCQVIEL Trigger: CAGCTCAATGACCTGGCAGGAGAGATACTTGGACCTGCTGTGGCAGAAAACACAGGACTCACAGAGCTTAACCTCAGTTGGAATCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CCA 90 bp | AAGGTTCAATTCAGAGGCACCCTCTTGGCGCAGAAGACAAGAAACTaGCACAACACTATTGGCCCGGCAAGACTTCAGATAGAGGGTAGC | + |
Preference number: 5 (lower is better) Translates to: KVQFRGTLLAQKTRN*HNTIGPARLQIEGS Trigger: GCTACCCTCTATCTGAAGTCTTGCCGGGCCAATAGTGTTGTGCCAGTTTCTTGTCTTCTGCGCCAAGAGGGTGCCTCTGAATTGAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS-3UTR CAA 90 bp | TTGCTGGAAATTGAACTCAGGACCTCTGAAAGAACAGTCAGTGCTCTTAACCACGCACCACAGAGCCCATaGTCCCGAAGATCCAGACGC | + |
Preference number: 5 (lower is better) Translates to: LLEIELRTSERTVSALNHAPQSP*SRRSRR Trigger: GCGTCTGGATCTTCGGGACAATGGGCTCTGTGGTGC...GTGGTTAAGAGCACTGACTGTTCTTTCAGAGGTCCTGAGTTCAATTTCCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | GACCAGCTCTCTCCCAGCGGGATTTGGGTATGGAGAGCTATGGCACAGAGTCAGAGTTCTTCTAAAACATaGTTGACCCTGAGGGCATCA | + |
Preference number: 5 (lower is better) Translates to: DQLSPSGIWVWRAMAQSQSSSKT*LTLRAS Trigger: TGATGCCCTCAGGGTCAACAATGTTTTAGAAGAACT...CTGACTCTGTGCCATAGCTCTCCATACCCAAATCCCGCTGGGAGAGAGCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | CCTGAATTCAGTTCTCAGCATCTACAAAGTGGGTTTCAACTGCCTGTAACACAAGCACCACAGAGCCCATaGTCCCGAAGATCCAGACGC | + |
Preference number: 5 (lower is better) Translates to: PEFSSQHLQSGFQLPVTQAPQSP*SRRSRR Trigger: GCGTCTGGATCTTCGGGACAATGGGCTCTGTGGTGC...TTGTGTTACAGGCAGTTGAAACCCACTTTGTAGATGCTGAGAACTGAATTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS-3UTR CAA 90 bp | CATGAAGATCTGGATGACAAGAATGTCATGGACCTTGTGTTCAGTGTTGTTCATGAGGTGCTGGGCTGCTaGTTCCTCCAGCCTGTTCCC | + |
Preference number: 5 (lower is better) Translates to: HEDLDDKNVMDLVFSVVHEVLGC*FLQPVP Trigger: GGGAACAGGCTGGAGGAACAAGCAGCCCAGCACCTC...ATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAGATCTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | GTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTCTAGTTCTTCTAAAACATaGTTGACCCTGAGGGCATCA | + |
Preference number: 5 (lower is better) Translates to: VVSPMLSGVSALLGDQLSSSSKT*LTLRAS Trigger: TGATGCCCTCAGGGTCAACAATGTTTTAGAAGAACT...AGAGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | GTTCCTCCTATAAGCCTGTGTGTCAGCACTCCTGGGAGACCAGTTCTCTCCCGGCTGCGAATAGGATTCTaGGAAATAATAAGAATCCGC | + |
Preference number: 5 (lower is better) Translates to: VPPISLCVSTPGRPVLSRLRIGF*EIIRIR Trigger: GCGGATTCTTATTATTTCCAAGAATCCTATTCGCAG...CCGGGAGAGAACTGGTCTCCCAGGAGTGCTGACACACAGGCTTATAGGAGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | CTGGATGACAAGAATGTCATGGACCTTGTGTTCAGTGTTGTTCATGGGCAGCTTACTGGCACAACACTATaGGCCCGGCAAGACTTCAGA | + |
Preference number: 5 (lower is better) Translates to: LDDKNVMDLVFSVVHGQLTGTTL*ARQDFR Trigger: TCTGAAGTCTTGCCGGGCCAATAGTGTTGTGCCAGT...AAGCTGCCCATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS TCA 90 bp | AGGGCATCACCAATCGCACTGGCACCAGAGTCTCCAAAGCCATTATaGGAGATGTCTAGGACTTTCAAGAATATATTTGCCTCCAGGCCT | + |
Preference number: 5 (lower is better) Translates to: RASPIALAPESPKPL*EMSRTFKNIFASRP Trigger: AGGCCTGGAGGCAAATATATTCTTGAAAGTCCTAGACATCTCTCATAATGGCTTTGGAGACTCTGGTGCCAGTGCGATTGGTGATGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CCA 90 bp | AGAGTCACTTGGTGCAGATGCTGGCTGGGATGGTGTAGAGGCTTGTaGCCAGTCTTTTCTTCTAGAAGTATAACGCTTTATACAGAGTCC | + |
Preference number: 5 (lower is better) Translates to: RVTWCRCWLGWCRGL*PVFSSRSITLYTES Trigger: GGACTCTGTATAAAGCGTTATACTTCTAGAAGAAAAGACTGGCCACAAGCCTCTACACCATCCCAGCCAGCATCTGCACCAAGTGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | TGGTGGTTTCACCTATGCTCTCAGGTGTGTCAGCACTCCTGGGAGACCAGCTCTACATTCTCTGCTTACTaGGATATCAATAAGAATCCG | + |
Preference number: 5 (lower is better) Translates to: WWFHLCSQVCQHSWETSSTFSAY*DINKNP Trigger: CGGATTCTTATTGATATCCAAGTAAGCAGAGAATGT...AGAGCTGGTCTCCCAGGAGTGCTGACACACCTGAGAGCATAGGTGAAACCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023442.13 |
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CDS-3UTR CAA 90 bp | AAAATCTGGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCTGACTGTGACTTGCTCCAGCCTGTTCCCTaGCAGCTGCATCTTCTCAAC | + |
Preference number: 5 (lower is better) Translates to: KIWLSVVLAGFAVSDCDLLQPVP*QLHLLN Trigger: GTTGAGAAGATGCAGCTGCAAGGGAACAGGCTGGAG...CAAGTCACAGTCAGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | ACACTGGCTTCTCTTCCAGAGAACCTGAATTCAGTTCTCAGCATCTACAAAGTGCGCAGCTTCTCCCTCTaGATCTTCATTCTTCTGAAC | + |
Preference number: 5 (lower is better) Translates to: TLASLPENLNSVLSIYKVRSFSL*IFILLN Trigger: GTTCAGAAGAATGAAGATCAAGAGGGAGAAGCTGCG...CACTTTGTAGATGCTGAGAACTGAATTCAGGTTCTCTGGAAGAGAAGCCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS CCA 90 bp | TGGCCAGTCTTTTCTTCTAGAAGTATAACGCTTTATACAGAGTCCTaGAAGAATTTCACTCATGGAGCTAGCGAGGTCCTCACATTCTCT | + |
Preference number: 5 (lower is better) Translates to: WPVFSSRSITLYTES*KNFTHGASEVLTFS Trigger: AGAGAATGTGAGGACCTCGCTAGCTCCATGAGTGAAATTCTTCCAGGACTCTGTATAAAGCGTTATACTTCTAGAAGAAAAGACTGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | CATGAAGATCTGGATGACAAGAATGTCATGGACCTTGTGTTCAGTGTTGTTCATCGCAGCTTCTCCCTCTaGATCTTCATTCTTCTGAAC | + |
Preference number: 5 (lower is better) Translates to: HEDLDDKNVMDLVFSVVHRSFSL*IFILLN Trigger: GTTCAGAAGAATGAAGATCAAGAGGGAGAAGCTGCG...ATGAACAACACTGAACACAAGGTCCATGACATTCTTGTCATCCAGATCTTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | AAAATCTGGTTATCTGTAGTGTTAGCTGGTTTTGCTGTCTCTGACTGTGACTTGCGCAGCTTCTCCCTCTaGATCTTCATTCTTCTGAAC | + |
Preference number: 5 (lower is better) Translates to: KIWLSVVLAGFAVSDCDLRSFSL*IFILLN Trigger: GTTCAGAAGAATGAAGATCAAGAGGGAGAAGCTGCG...CAAGTCACAGTCAGAGACAGCAAAACCAGCTAACACTACAGATAACCAGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS-3UTR CAA 90 bp | ACACTGGCTTCTCTTCCAGAGAACCTGAATTCAGTTCTCAGCATCTACAAAGTGAGTTCTTCTAAAACATaGTTGACCCTGAGGGCATCA | + |
Preference number: 5 (lower is better) Translates to: TLASLPENLNSVLSIYKVSSSKT*LTLRAS Trigger: TGATGCCCTCAGGGTCAACAATGTTTTAGAAGAACT...CACTTTGTAGATGCTGAGAACTGAATTCAGGTTCTCTGGAAGAGAAGCCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232637.2 |
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CDS TCA 72 bp | CCTCGGGCAAACGCGGTGGCTCCCAGACCTCGCAGGTaGTTCCAACTGAGGTTAAGCTCTGTGAGTCCTGTG | + |
Preference number: 6 (lower is better) Translates to: PRANAVAPRPRR*FQLRLSSVSPV Trigger: CACAGGACTCACAGAGCTTAACCTCAGTTGGAATCACCTGCGAGGTCTGGGAGCCACCGCGTTTGCCCGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS GCA 72 bp | AATGCTGTTCTTACGCAGGACATCAGCCAGAGCCTCTaGTCCAGCACCACAGAGCCCATTGTCCCGAAGATC | + |
Preference number: 6 (lower is better) Translates to: NAVLTQDISQSL*SSTTEPIVPKI Trigger: GATCTTCGGGACAATGGGCTCTGTGGTGCTGGAGCAGAGGCTCTGGCTGATGTCCTGCGTAAGAACAGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS GCA 72 bp | GCATCTTCTCAACAGTTGGGTTTAAGGCAAGGGCAGTaGAGATCGCCTGGAGCCCTGCAGCTCCAATCTGAT | + |
Preference number: 6 (lower is better) Translates to: ASSQQLGLRQGQ*RSPGALQLQSD Trigger: ATCAGATTGGAGCTGCAGGGCTCCAGGCGATCTGCACTGCCCTTGCCTTAAACCCAACTGTTGAGAAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS GCA 72 bp | CCAACTGAGGTTAAGCTCTGTGAGTCCTGTGTTTTCTaGCACAGCAGGTCCAAGTATCTCTCCTGCCAGGTC | + |
Preference number: 6 (lower is better) Translates to: PTEVKLCESCVF*HSRSKYLSCQV Trigger: GACCTGGCAGGAGAGATACTTGGACCTGCTGTGGCAGAAAACACAGGACTCACAGAGCTTAACCTCAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CCA 72 bp | CCACGGTGCCGAAGGTTCAATTCAGAGGCACCCTCTTaGCGCAGAAGACAAGAAACTGGCACAACACTATTG | + |
Preference number: 6 (lower is better) Translates to: PRCRRFNSEAPS*RRRQETGTTLL Trigger: CAATAGTGTTGTGCCAGTTTCTTGTCTTCTGCGCCAAGAGGGTGCCTCTGAATTGAACCTTCGGCACCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CCA 72 bp | GAGACCAGAGTCACTTGGTGCAGATGCTGGCTGGGATaGTGTAGAGGCTTGTGGCCAGTCTTTTCTTCTAGA | + |
Preference number: 6 (lower is better) Translates to: ETRVTWCRCWLG*CRGLWPVFSSR Trigger: TCTAGAAGAAAAGACTGGCCACAAGCCTCTACACCATCCCAGCCAGCATCTGCACCAAGTGACTCTGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS CAA 72 bp | GCCACGGTGCCGAAGGTTCAATTCAGAGGCACCCTCTaGGCGCAGAAGACAAGAAACTGGCACAACACTATT | + |
Preference number: 6 (lower is better) Translates to: ATVPKVQFRGTL*AQKTRNWHNTI Trigger: AATAGTGTTGTGCCAGTTTCTTGTCTTCTGCGCCAAGAGGGTGCCTCTGAATTGAACCTTCGGCACCGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CAA 90 bp | CTCCAAAGCCATTATGAGAGATGTCTAGGACTTTCAAGAATATATTaGCCTCCAGGCCTCGGGCAAACGCGGTGGCTCCCAGACCTCGCA | + |
Preference number: 6 (lower is better) Translates to: LQSHYERCLGLSRIY*PPGLGQTRWLPDLA Trigger: TGCGAGGTCTGGGAGCCACCGCGTTTGCCCGAGGCCTGGAGGCAAATATATTCTTGAAAGTCCTAGACATCTCTCATAATGGCTTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CAA 72 bp | TCAGACACATCCAGCAGTTCTAGGGCAGATGATTTGTaGTTCCGGACAGACTTAAGGAGGCCAACACAGCCG | + |
Preference number: 6 (lower is better) Translates to: SDTSSSSRADDL*FRTDLRRPTQP Trigger: CGGCTGTGTTGGCCTCCTTAAGTCTGTCCGGAACAACAAATCATCTGCCCTAGAACTGCTGGATGTGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100123.10 |
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CDS CAA 90 bp | ACTTGGATATCAGACACATCCAGCAGTTCTAGGGCAGATGATTTGTaGTTCCGGACAGACTTAAGGAGGCCAACACAGCCGTCACTGCGA | + |
Preference number: 6 (lower is better) Translates to: TWISDTSSSSRADDL*FRTDLRRPTQPSLR Trigger: TCGCAGTGACGGCTGTGTTGGCCTCCTTAAGTCTGTCCGGAACAACAAATCATCTGCCCTAGAACTGCTGGATGTGTCTGATATCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100123.10 |
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CDS CAA 72 bp | CATTATGAGAGATGTCTAGGACTTTCAAGAATATATTaGCCTCCAGGCCTCGGGCAAACGCGGTGGCTCCCA | + |
Preference number: 6 (lower is better) Translates to: HYERCLGLSRIY*PPGLGQTRWLP Trigger: TGGGAGCCACCGCGTTTGCCCGAGGCCTGGAGGCAAATATATTCTTGAAAGTCCTAGACATCTCTCATAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CAA 90 bp | GACACGGAGATTCGGTTGTTCCTCATATTCAGTTCTTCTAAAACATaGTTGACCCTGAGGGCATCACCAATCGCACTGGCACCAGAGTCT | + |
Preference number: 6 (lower is better) Translates to: DTEIRLFLIFSSSKT*LTLRASPIALAPES Trigger: AGACTCTGGTGCCAGTGCGATTGGTGATGCCCTCAGGGTCAACAATGTTTTAGAAGAACTGAATATGAGGAACAACCGAATCTCCGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CAA 90 bp | TGCAGACCCAATCCCAACTTCAGGGCTCCTGACACGGAGATTCGGTaGTTCCTCATATTCAGTTCTTCTAAAACATTGTTGACCCTGAGG | + |
Preference number: 6 (lower is better) Translates to: CRPNPNFRAPDTEIR*FLIFSSSKTLLTLR Trigger: CCTCAGGGTCAACAATGTTTTAGAAGAACTGAATATGAGGAACAACCGAATCTCCGTGTCAGGAGCCCTGAAGTTGGGATTGGGTCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS CAA 90 bp | ACCAGAGTCACTTGGTGCAGATGCTGGCTGGGATGGTGTAGAGGCTaGTGGCCAGTCTTTTCTTCTAGAAGTATAACGCTTTATACAGAG | + |
Preference number: 6 (lower is better) Translates to: TRVTWCRCWLGWCRG*WPVFSSRSITLYTE Trigger: CTCTGTATAAAGCGTTATACTTCTAGAAGAAAAGACTGGCCACAAGCCTCTACACCATCCCAGCCAGCATCTGCACCAAGTGACTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS CCA 72 bp | TGGTGCAGATGCTGGCTGGGATGGTGTAGAGGCTTGTaGCCAGTCTTTTCTTCTAGAAGTATAACGCTTTAT | + |
Preference number: 6 (lower is better) Translates to: WCRCWLGWCRGL*PVFSSRSITLY Trigger: ATAAAGCGTTATACTTCTAGAAGAAAAGACTGGCCACAAGCCTCTACACCATCCCAGCCAGCATCTGCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |
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CDS CAA 72 bp | CGGTTGTTCCTCATATTCAGTTCTTCTAAAACATTGTaGACCCTGAGGGCATCACCAATCGCACTGGCACCA | + |
Preference number: 6 (lower is better) Translates to: RLFLIFSSSKTL*TLRASPIALAP Trigger: TGGTGCCAGTGCGATTGGTGATGCCCTCAGGGTCAACAATGTTTTAGAAGAACTGAATATGAGGAACAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS TCA 72 bp | CCAATCGCACTGGCACCAGAGTCTCCAAAGCCATTATaGGAGATGTCTAGGACTTTCAAGAATATATTTGCC | + |
Preference number: 6 (lower is better) Translates to: PIALAPESPKPL*EMSRTFKNIFA Trigger: GGCAAATATATTCTTGAAAGTCCTAGACATCTCTCATAATGGCTTTGGAGACTCTGGTGCCAGTGCGATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 ENSMUST00000232637.2 |
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CDS TCA 72 bp | ATAGGATTCTTGGAAATAATAAGAATCCGCAGCGTCTaGTTGACTTGCAGACCCAATCCCAACTTCAGGGCT | + |
Preference number: 6 (lower is better) Translates to: IGFLEIIRIRSV*LTCRPNPNFRA Trigger: AGCCCTGAAGTTGGGATTGGGTCTGCAAGTCAATCAGACGCTGCGGATTCTTATTATTTCCAAGAATCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100123.10 |
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CDS CCA 72 bp | TTTTCTTCTAGAAGTATAACGCTTTATACAGAGTCCTaGAAGAATTTCACTCATGGAGCTAGCGAGGTCCTC | + |
Preference number: 6 (lower is better) Translates to: FSSRSITLYTES*KNFTHGASEVL Trigger: GAGGACCTCGCTAGCTCCATGAGTGAAATTCTTCCAGGACTCTGTATAAAGCGTTATACTTCTAGAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023442.13 ENSMUST00000100123.10 |