Pregenerated sensors for LRRC74A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059114Ensembl transcript IDs: ENSMUST00000095527.6, ENSMUST00000222180.2, ENSMUST00000223197.2, ENSMUST00000223308.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCGGAGACCATTGCACAGGGCCACAGCGCCACGAATGTTGAAGTaGTTCCAGCTTAGGTTCAGGGACTGGAGCCCTACGTTAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: DRRPLHRATAPRMLK*FQLRFRDWSPTLRA Trigger: GGCCCTTAACGTAGGGCTCCAGTCCCTGAACCTAAGCTGGAATCACTTCAACATTCGTGGCGCTGTGGCCCTGTGCAATGGTCTCCGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR TCA 90 bp | ATCCGGAGACCATTGCACAGGGCCACAGCGCCACGAATGTTGAAGTaGTTCCAGCTTAGGTTCAGGGACTGGAGCCCTACGTTAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: IRRPLHRATAPRMLK*FQLRFRDWSPTLRA Trigger: GGCCCTTAACGTAGGGCTCCAGTCCCTGAACCTAAGCTGGAATCACTTCAACATTCGTGGCGCTGTGGCCCTGTGCAATGGTCTCCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223197.2 |
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| 3UTR TCA 90 bp | GTGGAGAGACCCTGCAATCCCTTGTATACCACATCCAGCTGGGGGTaGATGGCACAGACTCCATCCAGGACTTTGACGAACTGCTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: VERPCNPLYTTSSWG*MAQTPSRTLTNCSD Trigger: ATCAGAGCAGTTCGTCAAAGTCCTGGATGGAGTCTGTGCCATTCACCCCCAGCTGGATGTGGTATACAAGGGATTGCAGGGTCTCTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR GCA 90 bp | TTTATCAGCTCCCTCACCTGGTACCGGTTGATGAGGATATTGCTTTaGTGGATCATGGCTTTCCGGAAGTCCCCAACAGGCATTGTCATC | + |
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Preference number: 1 (lower is better) Translates to: FISSLTWYRLMRILL*WIMAFRKSPTGIVI Trigger: GATGACAATGCCTGTTGGGGACTTCCGGAAAGCCATGATCCAGCAAAGCAATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR GCA 90 bp | CTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTaGCAGAACTTCTTTGATTGGCACTTCGATTCAGACCTGACCGGC | + |
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Preference number: 1 (lower is better) Translates to: LSFWPLVWSSHSHTT*QNFFDWHFDSDLTG Trigger: GCCGGTCAGGTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
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| 3UTR CCA 90 bp | ACCATACCCTTCTTCTCATCCAACTTCTTTATCAGCTCCCTCACCTaGTACCGGTTGATGAGGATATTGCTTTGCTGGATCATGGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: TIPFFSSNFFISSLT*YRLMRILLCWIMAF Trigger: GAAAGCCATGATCCAGCAAAGCAATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGATAAAGAAGTTGGATGAGAAGAAGGGTATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGCCATGATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGACATCCGGAGACCATTaGACAGGGCCACAGCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: DGHDERICPLQAQRVQEETSGDH*TGPQRH Trigger: GTGGCGCTGTGGCCCTGTGCAATGGTCTCCGGATGT...CTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCATCATGGCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223197.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATCCAACTTCTTTATCAGCTCCCTCACCTGGTACCGGTTGATGAGGATATTACATCCAGCTGGGGGTaGATGGCACAGACTCCATCC | + |
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Preference number: 2 (lower is better) Translates to: LIQLLYQLPHLVPVDEDITSSWG*MAQTPS Trigger: GGATGGAGTCTGTGCCATTCACCCCCAGCTGGATGT...AATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGATAAAGAAGTTGGATGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR GCA 90 bp | GCCATGATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCAGCATTTGTCCCAGATaGTCCCCTCCAATGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: AMMREYAPSKLKGFRKSFSICPR*SPPMSE Trigger: CTCTGACATTGGAGGGGAGCATCTGGGACAAATGCT...GAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCATCATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCTCCCTCACCTGGTACCGGTTGATGAGGATATTGCTTTGCTGGATCATGTGGTCCCCAGGGAGATaGTTTTCTTGGTGGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: ISSLTWYRLMRILLCWIMWSPGR*FSWWRD Trigger: GTCTCTCCACCAAGAAAAGCATCTCCCTGGGGACCA...CATGATCCAGCAAAGCAATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATGATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCTCAGAGAATTCGTTGTaGCTGAGGTTCAGGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: AMMREYAPSKLKGFRKSFSENSL*LRFRDL Trigger: CAGGTCCCTGAACCTCAGCCACAACGAATTCTCTGA...GAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCATCATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR CAA 90 bp | TTCAGCACTTGGAGGCACTCGTTGTTTTCTAGGCCCTTGCTGATTTaGGAGGCCCCCTCATTGGTAATGCCATTTCTACTGACATCCGGA | + |
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Preference number: 2 (lower is better) Translates to: FSTWRHSLFSRPLLI*EAPSLVMPFLLTSG Trigger: TCCGGATGTCAGTAGAAATGGCATTACCAATGAGGGGGCCTCCAAAATCAGCAAGGGCCTAGAAAACAACGAGTGCCTCCAAGTGCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223197.2 |
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| 3UTR CAA 90 bp | TTCAGCACTTGGAGGCACTCGTTGTTTTCTAGGCCCTTGCTGATTTaGGAGGCCCCCTCATTGGTAATGCCATTTCTACTGACATCTACG | + |
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Preference number: 2 (lower is better) Translates to: FSTWRHSLFSRPLLI*EAPSLVMPFLLTST Trigger: CGTAGATGTCAGTAGAAATGGCATTACCAATGAGGGGGCCTCCAAAATCAGCAAGGGCCTAGAAAACAACGAGTGCCTCCAAGTGCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR CAA 90 bp | ACGTTAGAGATGTCAATGTCTTCCATCCTGGATTTGGGGTTCCTCTaGATGGCCATGATGAGAGAATATGCCCCCTCCAAGCTCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TLEMSMSSILDLGFL*MAMMREYAPSKLKG Trigger: CCCTTTGAGCTTGGAGGGGGCATATTCTCTCATCATGGCCATCAAGAGGAACCCCAAATCCAGGATGGAAGACATTGACATCTCTAACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR CAA 90 bp | AACTTCTTTATCAGCTCCCTCACCTGGTACCGGTTGATGAGGATATaGCTTTGCTGGATCATGGCTTTCCGGAAGTCCCCAACAGGCATT | + |
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Preference number: 2 (lower is better) Translates to: NFFISSLTWYRLMRI*LCWIMAFRKSPTGI Trigger: AATGCCTGTTGGGGACTTCCGGAAAGCCATGATCCAGCAAAGCAATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGATAAAGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTTCAGGAAGAGCTTCAGCACTTGGAGGCACTCGTTGTTTTCTAGGCCCTTGCTTGAAGCTGTTTCCTaGAAGTTTCAGTTTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GFRKSFSTWRHSLFSRPLLEAVS*KFQFPE Trigger: CTCTGGAAACTGAAACTTTCAGGAAACAGCTTCAAG...CAAGGGCCTAGAAAACAACGAGTGCCTCCAAGTGCTGAAGCTCTTCCTGAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCAGCACTCCACGAATGTTGAAGTaGTTCCAGCTTAGGTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: MREYAPSKLKGFRKSFSTPRMLK*FQLRFR Trigger: CCTGAACCTAAGCTGGAATCACTTCAACATTCGTGG...AGTGCTGAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR CAA 90 bp | TCTGATACCAGAACGTTAGAGATGTCAATGTCTTCCATCCTGGATTaGGGGTTCCTCTTGATGGCCATGATGAGAGAATATGCCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SDTRTLEMSMSSILD*GFLLMAMMREYAPS Trigger: GGAGGGGGCATATTCTCTCATCATGGCCATCAAGAGGAACCCCAAATCCAGGATGGAAGACATTGACATCTCTAACGTTCTGGTATCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR CAA 90 bp | TTCTTCTCATCCAACTTCTTTATCAGCTCCCTCACCTGGTACCGGTaGATGAGGATATTGCTTTGCTGGATCATGGCTTTCCGGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: FFSSNFFISSLTWYR*MRILLCWIMAFRKS Trigger: GGACTTCCGGAAAGCCATGATCCAGCAAAGCAATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGATAAAGAAGTTGGATGAGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCATTCATGGACACGTCCAGTTTCTTCAGGGTCACATTAGACCGGAGACCCAGCGCATTCTTCCTTaGAGCTGTTTCCTGAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: KAIHGHVQFLQGHIRPETQRILP*SCFLKV Trigger: AACTTTCAGGAAACAGCTTCAAGGAAGAATGCGCTG...GGTCTCCGGTCTAATGTGACCCTGAAGAAACTGGACGTGTCCATGAATGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCAGCCAGCGCATTCTTCCTTaGAGCTGTTTCCTGAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: MMREYAPSKLKGFRKSFSQRILP*SCFLKV Trigger: AACTTTCAGGAAACAGCTTCAAGGAAGAATGCGCTG...GCTGAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATCCAACTTCTTTATCAGCTCCCTCACCTGGTACCGGTTGATGAGGATATTTCAGAGAATTCGTTGTaGCTGAGGTTCAGGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: LIQLLYQLPHLVPVDEDISENSL*LRFRDL Trigger: CAGGTCCCTGAACCTCAGCCACAACGAATTCTCTGA...AATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGATAAAGAAGTTGGATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTAATGCCATTTCTACTGACATCTACGTAGACCAGACAGCTGTTGAGTCTGAAGAGTTATTCTCCTaGAGGAAGTTCGAGATGATC | + |
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Preference number: 2 (lower is better) Translates to: IGNAISTDIYVDQTAVESEELFS*RKFEMI Trigger: GATCATCTCGAACTTCCTCCAGGAGAATAACTCTTC...AGACTCAACAGCTGTCTGGTCTACGTAGATGTCAGTAGAAATGGCATTACCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR TCA 72 bp | CCATTGCACAGGGCCACAGCGCCACGAATGTTGAAGTaGTTCCAGCTTAGGTTCAGGGACTGGAGCCCTACG | + |
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Preference number: 3 (lower is better) Translates to: PLHRATAPRMLK*FQLRFRDWSPT Trigger: CGTAGGGCTCCAGTCCCTGAACCTAAGCTGGAATCACTTCAACATTCGTGGCGCTGTGGCCCTGTGCAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCAGCACTTGGGTTAAGGGCCAGCATTaGTCCCAGATGCTCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: REYAPSKLKGFRKSFSTWVKGQH*SQMLPS Trigger: GGAGGGGAGCATCTGGGACAAATGCTGGCCCTTAAC...CCAAGTGCTGAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR TCA 72 bp | CCCTGCAATCCCTTGTATACCACATCCAGCTGGGGGTaGATGGCACAGACTCCATCCAGGACTTTGACGAAC | + |
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Preference number: 3 (lower is better) Translates to: PCNPLYTTSSWG*MAQTPSRTLTN Trigger: GTTCGTCAAAGTCCTGGATGGAGTCTGTGCCATTCACCCCCAGCTGGATGTGGTATACAAGGGATTGCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR GCA 72 bp | TGGAGCCCTACGTTAAGGGCCAGCATTTGTCCCAGATaGTCCCCTCCAATGTCAGAGAATTCGTTGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: WSPTLRASICPR*SPPMSENSLWL Trigger: CAGCCACAACGAATTCTCTGACATTGGAGGGGAGCATCTGGGACAAATGCTGGCCCTTAACGTAGGGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR GCA 72 bp | TCCCTCACCTGGTACCGGTTGATGAGGATATTGCTTTaGTGGATCATGGCTTTCCGGAAGTCCCCAACAGGC | + |
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Preference number: 3 (lower is better) Translates to: SLTWYRLMRILL*WIMAFRKSPTG Trigger: GCCTGTTGGGGACTTCCGGAAAGCCATGATCCAGCAAAGCAATATCCTCATCAACCGGTACCAGGTGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTTCAGGAAGAGCTTCAGCACTTGGAGGCACTCGTTGTTTTCTAGGCCCTTGGCAGCGCATTCTTCCTaGAAGCTGTTTCCTGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: GFRKSFSTWRHSLFSRPLAAHSS*KLFPES Trigger: ACTTTCAGGAAACAGCTTCAAGGAAGAATGCGCTGC...CAAGGGCCTAGAAAACAACGAGTGCCTCCAAGTGCTGAAGCTCTTCCTGAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR-3UTR CAA 90 bp | GCCATGATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCATGTCAGAGAATTCGTaGTGGCTGAGGTTCAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: AMMREYAPSKLKGFRKSFMSENS*WLRFRD Trigger: GTCCCTGAACCTCAGCCACAACGAATTCTCTGACAT...GAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCATCATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGGATTTGGGGTTCCTCTTGATGGCCATGATGAGAGAATATGCCCCCTCCAATTGGAGGCCCCCTCATaGGTAATGCCATTTCTACTG | + |
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Preference number: 3 (lower is better) Translates to: PGFGVPLDGHDERICPLQLEAPS*VMPFLL Trigger: CAGTAGAAATGGCATTACCAATGAGGGGGCCTCCAA...TTGGAGGGGGCATATTCTCTCATCATGGCCATCAAGAGGAACCCCAAATCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR CAA 90 bp | GCCATGATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCATGGCATCTTTCCTTTaGGCCTTTGGTCTGGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: AMMREYAPSKLKGFRKSFMASFL*AFGLVF Trigger: GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCAT...GAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCATCATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR-3UTR CAA 90 bp | CACCATACCCTTCTTCTCATCCAACTTCTTTATCAGCTCCCTCACCTGGTACCGATGTCAGAGAATTCGTaGTGGCTGAGGTTCAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: HHTLLLIQLLYQLPHLVPMSENS*WLRFRD Trigger: GTCCCTGAACCTCAGCCACAACGAATTCTCTGACAT...CGGTACCAGGTGAGGGAGCTGATAAAGAAGTTGGATGAGAAGAAGGGTATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR CCA 72 bp | TCCAAGCTCAAAGGGTTCAGGAAGAGCTTCAGCACTTaGAGGCACTCGTTGTTTTCTAGGCCCTTGCTGATT | + |
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Preference number: 3 (lower is better) Translates to: SKLKGFRKSFST*RHSLFSRPLLI Trigger: AATCAGCAAGGGCCTAGAAAACAACGAGTGCCTCCAAGTGCTGAAGCTCTTCCTGAACCCTTTGAGCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
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| 3UTR CCA 72 bp | GTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTaGTCTTCTCATAGCCACACAACTTGCCAGAACTTC | + |
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Preference number: 3 (lower is better) Translates to: VWSWHLSFWPLV*SSHSHTTCQNF Trigger: GAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
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| 3UTR CCA 72 bp | CTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTaGTCTGGTCTTCTCATAGCCACACAACTTGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LRSGHGIFPFGL*SGLLIATQLAR Trigger: TCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
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| 3UTR GCA 72 bp | TGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTaGCAGAACTTCTTTGATTGGCACTTCGATTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: WPLVWSSHSHTT*QNFFDWHFDSD Trigger: GTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
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| 3UTR CCA 72 bp | TCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTaGCACTTCGATTCAGACCTGACCGGCTGTTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: SHSHTTCQNFFD*HFDSDLTGCCD Trigger: ATCACAACAGCCGGTCAGGTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
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| 3UTR CCA 72 bp | GAAAGTTTCAGTTTCCAGAGCGAAGAGTTATTCTCCTaGAGGAAGTTCGAGATGATCCTGGCTCCTTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: ESFSFQSEELFS*RKFEMILAPSK Trigger: TTTGGAAGGAGCCAGGATCATCTCGAACTTCCTCCAGGAGAATAACTCTTCGCTCTGGAAACTGAAACTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR CCA 72 bp | TTCTTCTCATCCAACTTCTTTATCAGCTCCCTCACCTaGTACCGGTTGATGAGGATATTGCTTTGCTGGATC | + |
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Preference number: 3 (lower is better) Translates to: FFSSNFFISSLT*YRLMRILLCWI Trigger: GATCCAGCAAAGCAATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGATAAAGAAGTTGGATGAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR TCA 72 bp | ATAGGGCTTGACATAAAAGTGCAGCGCATTCTTCCTTaGAGCTGTTTCCTGAAAGTTTCAGTTTCCAGAGCG | + |
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Preference number: 3 (lower is better) Translates to: IGLDIKVQRILP*SCFLKVSVSRA Trigger: CGCTCTGGAAACTGAAACTTTCAGGAAACAGCTTCAAGGAAGAATGCGCTGCACTTTTATGTCAAGCCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| 3UTR TCA 72 bp | CCACTGTCTTGCTCAAATCTTCCTTTTCAAGTGAACTaGAGTTCACCATACCCTTCTTCTCATCCAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: PLSCSNLPFQVN*SSPYPSSHPTS Trigger: AGAAGTTGGATGAGAAGAAGGGTATGGTGAACTTCAGTTCACTTGAAAAGGAAGATTTGAGCAAGACAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| CDS-3UTR GCA 90 bp | GGACTGGAGCCCTACGTTAAGGGCCAGCATTTGTCCCAGATGCTCCCCTCCAATTGCCCTCTTCCTGGATaGAGTTGTCTCCCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GLEPYVKGQHLSQMLPSNCPLPG*SCLPAP Trigger: TGGAGCTGGGAGACAACTGCATCCAGGAAGAGGGCA...ATTGGAGGGGAGCATCTGGGACAAATGCTGGCCCTTAACGTAGGGCTCCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| CDS-3UTR GCA 90 bp | TCCAGTTTCTTCAGGGTCACATTAGACCGGAGACCATTGCACAGGGCCACAGCGCTACACCCACCAGTTTaGAGGCCTCCAGGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSFFRVTLDRRPLHRATALHPPV*RPPGTA Trigger: AGCTGTACCTGGAGGCCTGCAAACTGGTGGGTGTAG...CGCTGTGGCCCTGTGCAATGGTCTCCGGTCTAATGTGACCCTGAAGAAACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
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| CDS-3UTR CCA 90 bp | TCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCCCAGCTGGGGGTGAATaGCACAGACTCCATCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SHLGLVMASFLLAFGLVFPAGGE*HRLHPG Trigger: TCCTGGATGGAGTCTGTGCCATTCACCCCCAGCTGG...GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS-3UTR CCA 90 bp | CTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTTCTGGATCAGCCTCATaGGGTTGGTCCCCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LALRSGHGIFPFGLWSGLSGSAS*GWSPGR Trigger: TCTCCCTGGGGACCAACCCCATGAGGCTGATCCAGA...AAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS-3UTR TCA 90 bp | ATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCAGCACTCCTCCATGTTCCGGATaGAGTAGGAGGCAGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: MREYAPSKLKGFRKSFSTPPCSG*SRRQAL Trigger: TAGTGCCTGCCTCCTACTTCATCCGGAACATGGAGG...AGTGCTGAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
||
| CDS-3UTR GCA 90 bp | CTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTACACCCACCAGTTTaGAGGCCTCCAGGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LALRSGHGIFPFGLWSGLLHPPV*RPPGTA Trigger: AGCTGTACCTGGAGGCCTGCAAACTGGTGGGTGTAG...AAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACCAGCTGGGGGTGAATaGCACAGACTCCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGHGIFPFGLWSGLLIATPAGGE*HRLHPG Trigger: TCCTGGATGGAGTCTGTGCCATTCACCCCCAGCTGG...TGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CCA 90 bp | TCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCAGCCTCATGGGGTTaGTCCCCAGGGAGATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHLGLVMASFLLAFGLVFSASWG*SPGRCF Trigger: AAAGCATCTCCCTGGGGACCAACCCCATGAGGCTGA...GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACATCTGGATCAGCCTCATaGGGTTGGTCCCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGHGIFPFGLWSGLLIATSGSAS*GWSPGR Trigger: TCTCCCTGGGGACCAACCCCATGAGGCTGATCCAGA...TGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR TCA 90 bp | TTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCACAGTAGAGGGTaGCATCGCTGTCCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLALRSGHGIFPFGLWSGLHSRG*HRCPEV Trigger: CACCTCAGGACAGCGATGTCACCCTCTACTGTGAAG...ACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | TGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCCTCCATGTTCCGGATaGAGTAGGAGGCAGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: WHLSFWPLVWSSHSHTTCPPCSG*SRRQAL Trigger: TAGTGCCTGCCTCCTACTTCATCCGGAACATGGAGG...GCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR TCA 90 bp | CTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTTCTCCATCAGACTCATaGTGCCCTCTTCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LALRSGHGIFPFGLWSGLSPSDS*CPLPGC Trigger: GCATCCAGGAAGAGGGCATCATGAGTCTGATGGAGA...AAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | TCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTTTCTAGGCCCTTGCTaGTTTTGGAGGCCCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHLGLVMASFLLAFGLVFFLGPC*FWRPPH Trigger: ATGAGGGGGCCTCCAAAATCAGCAAGGGCCTAGAAA...GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTACATCCAGCTGGGGGTaGATGGCACAGACTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLWSGLLIATQLARTSLITSSWG*MAQTPS Trigger: GGATGGAGTCTGTGCCATTCACCCCCAGCTGGATGT...AATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR GCA 90 bp | TGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACATGCCCTCTTCCTGGATaGAGTTGTCTCCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSWHLSFWPLVWSSHSHTCPLPG*SCLPAP Trigger: TGGAGCTGGGAGACAACTGCATCCAGGAAGAGGGCA...TGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGCCTCCATGTTCCGGATaGAGTAGGAGGCAGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: IFSHLGLVMASFLLAFGLPPCSG*SRRQAL Trigger: TAGTGCCTGCCTCCTACTTCATCCGGAACATGGAGG...CAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTTTTCTAGGCCCTTGCTaGTTTTGGAGGCCCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLALRSGHGIFPFGLWSGFLGPC*FWRPPH Trigger: ATGAGGGGGCCTCCAAAATCAGCAAGGGCCTAGAAA...ACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | GCCCAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCACATCCAGCTGGGGGTaGATGGCACAGACTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AQNQAIFYFLALRSGHGITSSWG*MAQTPS Trigger: GGATGGAGTCTGTGCCATTCACCCCCAGCTGGATGT...GATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223308.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCAGCATTTGTCCCAGATaGTCCCCTCCAATGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSHLGLVMASFLLAFGLVSICPR*SPPMSE Trigger: CTCTGACATTGGAGGGGAGCATCTGGGACAAATGCT...GACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCAGCACTTGGAGGCACTCGTTGGAAGAGTTATTCTCCTaGAGGAAGTTCGAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: PSKLKGFRKSFSTWRHSLEELFS*RKFEMI Trigger: GATCATCTCGAACTTCCTCCAGGAGAATAACTCTTC...CAACGAGTGCCTCCAAGTGCTGAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223197.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCTCAGAGAATTCGTTGTaGCTGAGGTTCAGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIFPFGLWSGLLIATQLASENSL*LRFRDL Trigger: CAGGTCCCTGAACCTCAGCCACAACGAATTCTCTGA...GGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| 3UTR CAA 72 bp | TGGAGGCACTCGTTGTTTTCTAGGCCCTTGCTGATTTaGGAGGCCCCCTCATTGGTAATGCCATTTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: WRHSLFSRPLLI*EAPSLVMPFLL Trigger: CAGTAGAAATGGCATTACCAATGAGGGGGCCTCCAAAATCAGCAAGGGCCTAGAAAACAACGAGTGCCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222180.2 ENSMUST00000223197.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTCTTCACAGTAGAGGGTaGCATCGCTGTCCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YFLALRSGHGIFPFGLWSLHSRG*HRCPEV Trigger: CACCTCAGGACAGCGATGTCACCCTCTACTGTGAAG...AGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | CACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTCAGACCTGACCGGCCCACGAATGTTGAAGTaGTTCCAGCTTAGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTTCQNFFDWHFDSDLTGPRMLK*FQLRFR Trigger: CCTGAACCTAAGCTGGAATCACTTCAACATTCGTGG...GCCGGTCAGGTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR GCA 90 bp | TATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTCTACACCCACCAGTTTaGAGGCCTCCAGGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YFLALRSGHGIFPFGLWSLHPPV*RPPGTA Trigger: AGCTGTACCTGGAGGCCTGCAAACTGGTGGGTGTAG...AGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTTGGTCCCCAGGGAGATaGTTTTCTTGGTGGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLWSGLLIATQLARTSLIWSPGR*FSWWRD Trigger: GTCTCTCCACCAAGAAAAGCATCTCCCTGGGGACCA...AATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CCA 90 bp | TTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTTCAGAGAATTCGTTGTaGCTGAGGTTCAGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLALRSGHGIFPFGLWSGSENSL*LRFRDL Trigger: CAGGTCCCTGAACCTCAGCCACAACGAATTCTCTGA...ACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTCAGCCTCATGGGGTTaGTCCCCAGGGAGATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQNQAIFYFLALRSGHGISASWG*SPGRCF Trigger: AAAGCATCTCCCTGGGGACCAACCCCATGAGGCTGA...GATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000223308.2 |
||
| 3UTR CAA 72 bp | ATGTCAATGTCTTCCATCCTGGATTTGGGGTTCCTCTaGATGGCCATGATGAGAGAATATGCCCCCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSMSSILDLGFL*MAMMREYAPSK Trigger: CTTGGAGGGGGCATATTCTCTCATCATGGCCATCAAGAGGAACCCCAAATCCAGGATGGAAGACATTGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTCTTCACAGTAGAGGGTaGCATCGCTGTCCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRIKPYFIFSHLGLVMASLHSRG*HRCPEV Trigger: CACCTCAGGACAGCGATGTCACCCTCTACTGTGAAG...AGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTTCTCCATCAGACTCATaGTGCCCTCTTCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLIATQLARTSLIGTSISPSDS*CPLPGC Trigger: GCATCCAGGAAGAGGGCATCATGAGTCTGATGGAGA...AATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCAAGAGCTTCAGCACTTaGAGGCACTCGTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GIFPFGLWSGLLIATQLAKSFST*RHSLFS Trigger: AGAAAACAACGAGTGCCTCCAAGTGCTGAAGCTCTT...GGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCCCTTTTCAAGTGAACTaGAGTTCACCATACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSGHGIFPFGLWSGLLIAPFQVN*SSPYPS Trigger: AGAAGGGTATGGTGAACTTCAGTTCACTTGAAAAGG...GGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCAGAACTTTGGTGGAGAGACCCTaGAATCCCTTGTATACCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPFGLWSGLLIATQLARTLVERP*NPLYTT Trigger: TGTGGTATACAAGGGATTGCAGGGTCTCTCCACCAA...AGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR GCA 90 bp | TCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACAATGAGGATATTGCTTTaGTGGATCATGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGHGIFPFGLWSGLLIATMRILL*WIMAFR Trigger: CCGGAAAGCCATGATCCAGCAAAGCAATATCCTCAT...TGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR GCA 90 bp | TTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCCATAGCCACACAACTTaGCAGAACTTCTTTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSHLGLVMASFLLAFGLVHSHTT*QNFFDW Trigger: CCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATG...GACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223308.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGAGAATATGCCCCCTCCAAGCTCAAAGGGTTCAGGAAGAGCTTCAGCACTCTCTTTCTCAACACTTaGAAGGACTTCAGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MREYAPSKLKGFRKSFSTLFLNT*KDFSFT Trigger: TGTGAAGCTGAAGTCCTTCCAAGTGTTGAGAAAGAG...AGTGCTGAAGCTCTTCCTGAACCCTTTGAGCTTGGAGGGGGCATATTCTCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
||
| 3UTR CAA 72 bp | TCCAACTTCTTTATCAGCTCCCTCACCTGGTACCGGTaGATGAGGATATTGCTTTGCTGGATCATGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNFFISSLTWYR*MRILLCWIMAF Trigger: GAAAGCCATGATCCAGCAAAGCAATATCCTCATCAACCGGTACCAGGTGAGGGAGCTGATAAAGAAGTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
||
| 3UTR CAA 72 bp | GTGGACTGGAGTTCCTCAGGCTTGGGTTCCACTGTCTaGCTCAAATCTTCCTTTTCAAGTGAACTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VDWSSSGLGSTV*LKSSFSSELKF Trigger: GAACTTCAGTTCACTTGAAAAGGAAGATTTGAGCAAGACAGTGGAACCCAAGCCTGAGGAACTCCAGTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTCCACGAATGTTGAAGTaGTTCCAGCTTAGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YFLALRSGHGIFPFGLWSPRMLK*FQLRFR Trigger: CCTGAACCTAAGCTGGAATCACTTCAACATTCGTGG...AGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGATGAGGATATTGCTTTaGTGGATCATGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IFSHLGLVMASFLLAFGLMRILL*WIMAFR Trigger: CCGGAAAGCCATGATCCAGCAAAGCAATATCCTCAT...CAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACACTCTTTCTCAACACTTaGAAGGACTTCAGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: WSWHLSFWPLVWSSHSHTLFLNT*KDFSFT Trigger: TGTGAAGCTGAAGTCCTTCCAAGTGTTGAGAAAGAG...TGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTCTTTCTCAACACTTaGAAGGACTTCAGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLALRSGHGIFPFGLWSGLFLNT*KDFSFT Trigger: TGTGAAGCTGAAGTCCTTCCAAGTGTTGAGAAAGAG...ACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGCCTTCTGTCCGATGTTaGAGAATTTCTCTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLLIATQLARTSLIGTSPSVRC*RISLCL Trigger: AAGACACAGAGAAATTCTTCAACATCGGACAGAAGG...CGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR TCA 90 bp | CAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTTCTCCATCAGACTCATaGTGCCCTCTTCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QNQAIFYFLALRSGHGIFSPSDS*CPLPGC Trigger: GCATCCAGGAAGAGGGCATCATGAGTCTGATGGAGA...AAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTCAGCGCATTCTTCCTTaGAGCTGTTTCCTGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YFLALRSGHGIFPFGLWSQRILP*SCFLKV Trigger: AACTTTCAGGAAACAGCTTCAAGGAAGAATGCGCTG...AGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACAATCTTCCTTTTCAAGTaGACTGAAGTTCACCATACC | + |
|
Preference number: 4 (lower is better) Translates to: SGHGIFPFGLWSGLLIATIFLFK*TEVHHT Trigger: GGTATGGTGAACTTCAGTTCACTTGAAAAGGAAGAT...TGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR GCA 90 bp | AGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCTGGTCCCCAGGGAGATaGTTTTCTTGGTGGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RIKPYFIFSHLGLVMASFWSPGR*FSWWRD Trigger: GTCTCTCCACCAAGAAAAGCATCTCCCTGGGGACCA...GAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR GCA 90 bp | TGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCTGGGTTCCACTGTCTTaGTCAAATCTTCCTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WHLSFWPLVWSSHSHTTCWVPLS*SNLPFQ Trigger: TTGAAAAGGAAGATTTGAGCAAGACAGTGGAACCCA...GCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTGGGAAGAGTTATTCTCCTaGAGGAAGTTCGAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: PLVWSSHSHTTCQNFFDWEELFS*RKFEMI Trigger: GATCATCTCGAACTTCCTCCAGGAGAATAACTCTTC...CCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR TCA 90 bp | GGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTCCTTCTGTCCGATGTTaGAGAATTTCTCTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLLIATQLARTSLIGTSIPSVRC*RISLCL Trigger: AAGACACAGAGAAATTCTTCAACATCGGACAGAAGG...AATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATCTTGAAGCTGTTTCCTaGAAGTTTCAGTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WSSHSHTTCQNFFDWHFDLEAVS*KFQFPE Trigger: CTCTGGAAACTGAAACTTTCAGGAAACAGCTTCAAG...ATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR TCA 90 bp | GCCCAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCCTTGAAGCTGTTTCCTaGAAGTTTCAGTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQNQAIFYFLALRSGHGILEAVS*KFQFPE Trigger: CTCTGGAAACTGAAACTTTCAGGAAACAGCTTCAAG...GATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTTTGACGAACTGCTCTaGTACCAGAACGTTAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WSSHSHTTCQNFFDWHFDFDELL*YQNVRD Trigger: ATCTCTAACGTTCTGGTATCAGAGCAGTTCGTCAAA...ATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR GCA 90 bp | CAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTAGCATTTGTCCCAGATaGTCCCCTCCAATGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNQAIFYFLALRSGHGIFSICPR*SPPMSE Trigger: CTCTGACATTGGAGGGGAGCATCTGGGACAAATGCT...AAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| 3UTR CAA 72 bp | AGAACGTTAGAGATGTCAATGTCTTCCATCCTGGATTaGGGGTTCCTCTTGATGGCCATGATGAGAGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLEMSMSSILD*GFLLMAMMREY Trigger: ATATTCTCTCATCATGGCCATCAAGAGGAACCCCAAATCCAGGATGGAAGACATTGACATCTCTAACGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
||
| CDS-3UTR GCA 90 bp | CAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTTTGGTGGAGAGACCCTaGAATCCCTTGTATACCACA | + |
|
Preference number: 4 (lower is better) Translates to: QNQAIFYFLALRSGHGIFLVERP*NPLYTT Trigger: TGTGGTATACAAGGGATTGCAGGGTCTCTCCACCAA...AAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | CAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCAGCGCATTCTTCCTTaGAGCTGTTTCCTGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QNQAIFYFLALRSGHGIFQRILP*SCFLKV Trigger: AACTTTCAGGAAACAGCTTCAAGGAAGAATGCGCTG...AAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CCA 90 bp | AGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCAAGAGCTTCAGCACTTaGAGGCACTCGTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIKPYFIFSHLGLVMASFKSFST*RHSLFS Trigger: AGAAAACAACGAGTGCCTCCAAGTGCTGAAGCTCTT...GAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR TCA 90 bp | AGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCTTTGACGAACTGCTCTaGTACCAGAACGTTAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RIKPYFIFSHLGLVMASFFDELL*YQNVRD Trigger: ATCTCTAACGTTCTGGTATCAGAGCAGTTCGTCAAA...GAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTTAGACCGGAGACCATaGCACAGGGCCACAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHLGLVMASFLLAFGLVFLDRRP*HRATAP Trigger: TGGCGCTGTGGCCCTGTGCAATGGTCTCCGGTCTAA...GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS CCA 90 bp | ACCAGAGTTATAGCAATGGCTTTGGTACCCATGGGGCCCAGACCATaGTGGTTGAGATTCACGCAGGACTCCTCCATGTTCCGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TRVIAMALVPMGPRP*WLRFTQDSSMFRMK Trigger: CTTCATCCGGAACATGGAGGAGTCCTGCGTGAATCTCAACCACCATGGTCTGGGCCCCATGGGTACCAAAGCCATTGCTATAACTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | GGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCACTACACCCACCAGTTaGCAGGCCTCCAGGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GIFPFGLWSGLLIATQLATTPTS*QASRYS Trigger: GCTGTACCTGGAGGCCTGCAAACTGGTGGGTGTAGT...GGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACATTAGACCGGAGACCATaGCACAGGGCCACAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGHGIFPFGLWSGLLIATLDRRP*HRATAP Trigger: TGGCGCTGTGGCCCTGTGCAATGGTCTCCGGTCTAA...TGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | TCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCGCTTCAGCCTCATCTTaGGTCTCGGACTCAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHLGLVMASFLLAFGLVFASASS*VSDSTG Trigger: GCCTGTTGAGTCCGAGACCAAAGATGAGGCTGAAGC...GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTACTACACCCACCAGTTaGCAGGCCTCCAGGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLALRSGHGIFPFGLWSGTTPTS*QASRYS Trigger: GCTGTACCTGGAGGCCTGCAAACTGGTGGGTGTAGT...ACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACAGTTAAGGGCCAGCATTaGTCCCAGATGCTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGHGIFPFGLWSGLLIATVKGQH*SQMLPS Trigger: GGAGGGGAGCATCTGGGACAAATGCTGGCCCTTAAC...TGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGATTTGGGGTTCCTCTTGATGGCCATGATGAGAGAATATGCCCCCTCCAATGTTGGACATGGTGGTaGAGATTCACGCAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGFGVPLDGHDERICPLQCWTWW*RFTQDS Trigger: GGAGTCCTGCGTGAATCTCAACCACCATGTCCAACA...TTGGAGGGGGCATATTCTCTCATCATGGCCATCAAGAGGAACCCCAAATCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
||
| CDS-3UTR CAA 90 bp | ACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTCAGACCTGACCGGCTGTGCTTCAGCCTCATCTTaGGTCTCGGACTCAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TTCQNFFDWHFDSDLTGCASASS*VSDSTG Trigger: GCCTGTTGAGTCCGAGACCAAAGATGAGGCTGAAGC...ACAGCCGGTCAGGTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGACTACACCCACCAGTTaGCAGGCCTCCAGGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IFSHLGLVMASFLLAFGLTTPTS*QASRYS Trigger: GCTGTACCTGGAGGCCTGCAAACTGGTGGGTGTAGT...CAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGTTAAGGGCCAGCATTaGTCCCAGATGCTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YFLALRSGHGIFPFGLWSVKGQH*SQMLPS Trigger: GGAGGGGAGCATCTGGGACAAATGCTGGCCCTTAAC...AGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCGCAGCGCATTCTTCCTaGAAGCTGTTTCCTGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHLGLVMASFLLAFGLVFAAHSS*KLFPES Trigger: ACTTTCAGGAAACAGCTTCAAGGAAGAATGCGCTGC...GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | ACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTCAGACCTGACCGGCTGTTTGGAGGCCCCCTCATaGGTAATGCCATTTCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: TTCQNFFDWHFDSDLTGCLEAPS*VMPFLL Trigger: CAGTAGAAATGGCATTACCAATGAGGGGGCCTCCAA...ACAGCCGGTCAGGTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | CATAGCCACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTCAGACCTGACTTGGAGGCACTCGTaGTTTTCTAGGCCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSHTTCQNFFDWHFDSDLTWRHS*FSRPLL Trigger: CAGCAAGGGCCTAGAAAACAACGAGTGCCTCCAAGT...CAGGTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | TTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTAGGGAGATGCTTTTCTaGGTGGAGAGACCCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLALRSGHGIFPFGLWSGREMLF*VERPCN Trigger: ATTGCAGGGTCTCTCCACCAAGAAAAGCATCTCCCT...ACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCCGGTTGATGAGGATATaGCTTTGCTGGATCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHLGLVMASFLLAFGLVFRLMRI*LCWIMA Trigger: AGCCATGATCCAGCAAAGCAATATCCTCATCAACCG...GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS TCA 90 bp | TCTCTTTCTCAACACTTGGAAGGACTTCAGCTTCACAGTAGAGGGTaGCATCGCTGTCCTGAGGTGTCAATTCAGCTTCAGCCTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSQHLEGLQLHSRG*HRCPEVSIQLQPHL Trigger: AAGATGAGGCTGAAGCTGAATTGACACCTCAGGACAGCGATGTCACCCTCTACTGTGAAGCTGAAGTCCTTCCAAGTGTTGAGAAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS TCA 90 bp | CCACCAGTTTGCAGGCCTCCAGGTACAGCTCCTTCTGTCCGATGTTaGAGAATTTCTCTGTGTCTTCAATTTCCAGGTCGGTTTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPVCRPPGTAPSVRC*RISLCLQFPGRFLN Trigger: ATTCAGAAACCGACCTGGAAATTGAAGACACAGAGAAATTCTTCAACATCGGACAGAAGGAGCTGTACCTGGAGGCCTGCAAACTGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTGCTTCAGCCTCATCTTaGGTCTCGGACTCAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRIKPYFIFSHLGLVMASASASS*VSDSTG Trigger: GCCTGTTGAGTCCGAGACCAAAGATGAGGCTGAAGC...AGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | CACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTCAGACCTGACCGGCTCTCTTTCTCAACACTaGGAAGGACTTCAGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HTTCQNFFDWHFDSDLTGSLSQH*EGLQLH Trigger: GTGAAGCTGAAGTCCTTCCAAGTGTTGAGAAAGAGA...GCCGGTCAGGTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR CAA 90 bp | TGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCGCAGCGCATTCTTCCTaGAAGCTGTTTCCTGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WHLSFWPLVWSSHSHTTCAAHSS*KLFPES Trigger: ACTTTCAGGAAACAGCTTCAAGGAAGAATGCGCTGC...GCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCAGAACTATGTCAGAGAATTCGTaGTGGCTGAGGTTCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FPFGLWSGLLIATQLARTMSENS*WLRFRD Trigger: GTCCCTGAACCTCAGCCACAACGAATTCTCTGACAT...AGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | TATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTACTTGGAGGCACTCGTaGTTTTCTAGGCCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YFLALRSGHGIFPFGLWSTWRHS*FSRPLL Trigger: CAGCAAGGGCCTAGAAAACAACGAGTGCCTCCAAGT...AGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCAGAACTCTCACCTGGTACCGGTaGATGAGGATATTGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FPFGLWSGLLIATQLARTLTWYR*MRILLC Trigger: GCAAAGCAATATCCTCATCAACCGGTACCAGGTGAG...AGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | TGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCTTGAGGACCGTAGTGTaGGACATGGTGGTTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: WHLSFWPLVWSSHSHTTCLRTVV*DMVVEI Trigger: AATCTCAACCACCATGTCCAACACTACGGTCCTCAA...GCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222180.2 |
||
| CDS-3UTR CAA 90 bp | TCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCCTTCTGTCCGATGTaGAAGAATTTCTCTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHLGLVMASFLLAFGLVFSFCPM*KNFSVS Trigger: AGACACAGAGAAATTCTTCAACATCGGACAGAAGGA...GAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | CATAGCCACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATTCAGACCTGGATTTGGGGTTCCTCTaGATGGCCATGATGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HSHTTCQNFFDWHFDSDLDLGFL*MAMMRE Trigger: TTCTCTCATCATGGCCATCAAGAGGAACCCCAAATC...CAGGTCTGAATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | TGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACATCCTTCTGTCCGATGTaGAAGAATTTCTCTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WSWHLSFWPLVWSSHSHTSFCPM*KNFSVS Trigger: AGACACAGAGAAATTCTTCAACATCGGACAGAAGGA...TGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAAGATGCCATGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTGGAGGCCCCCTCATaGGTAATGCCATTTCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: PRIKPYFIFSHLGLVMASLEAPS*VMPFLL Trigger: CAGTAGAAATGGCATTACCAATGAGGGGGCCTCCAA...AGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCGATTTGGGGTTCCTCTaGATGGCCATGATGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AQNQAIFYFLALRSGHGIDLGFL*MAMMRE Trigger: TTCTCTCATCATGGCCATCAAGAGGAACCCCAAATC...GATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCTTCTCATAGCCACACAACTTGCCAGAACTTCTTTGATTGGCACTTCGATCGGTTGATGAGGATATaGCTTTGCTGGATCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WSSHSHTTCQNFFDWHFDRLMRI*LCWIMA Trigger: AGCCATGATCCAGCAAAGCAATATCCTCATCAACCG...ATCGAAGTGCCAATCAAAGAAGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095527.6 |
||
| CDS-3UTR CAA 90 bp | TATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTTTTGGCCTTTGGTCTTCTCTTTCTCAACACTaGGAAGGACTTCAGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: YFLALRSGHGIFPFGLWSSLSQH*EGLQLH Trigger: GTGAAGCTGAAGTCCTTCCAAGTGTTGAGAAAGAGA...AGACCAAAGGCCAAAAGGAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTTGGCCTTTGGTCTGGTCTTCTCATAGCCACACAACTTGCCAGAACTTCCTTCTGTCCGATGTaGAAGAATTTCTCTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: FPFGLWSGLLIATQLARTSFCPM*KNFSVS Trigger: AGACACAGAGAAATTCTTCAACATCGGACAGAAGGA...AGTTCTGGCAAGTTGTGTGGCTATGAGAAGACCAGACCAAAGGCCAAAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 |
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| CDS-3UTR CAA 90 bp | CAGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTATGTCAGAGAATTCGTaGTGGCTGAGGTTCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: QNQAIFYFLALRSGHGIFMSENS*WLRFRD Trigger: GTCCCTGAACCTCAGCCACAACGAATTCTCTGACAT...AAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS-3UTR CAA 90 bp | AGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCAGGGAGATGCTTTTCTaGGTGGAGAGACCCTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: RIKPYFIFSHLGLVMASFREMLF*VERPCN Trigger: ATTGCAGGGTCTCTCCACCAAGAAAAGCATCTCCCT...GAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS-3UTR CAA 90 bp | AGAATCAAGCCATATTTTATTTTCTCGCACTTAGGTCTGGTCATGGCATCTTTCCTCACCTGGTACCGGTaGATGAGGATATTGCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: RIKPYFIFSHLGLVMASFLTWYR*MRILLC Trigger: GCAAAGCAATATCCTCATCAACCGGTACCAGGTGAG...GAAAGATGCCATGACCAGACCTAAGTGCGAGAAAATAAAATATGGCTTGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS CCA 72 bp | GCAATGGCTTTGGTACCCATGGGGCCCAGACCATGGTaGTTGAGATTCACGCAGGACTCCTCCATGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: AMALVPMGPRPW*LRFTQDSSMFR Trigger: CCGGAACATGGAGGAGTCCTGCGTGAATCTCAACCACCATGGTCTGGGCCCCATGGGTACCAAAGCCATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS CAA 72 bp | ATGGCTTTGGTACCCATGGGGCCCAGACCATGGTGGTaGAGATTCACGCAGGACTCCTCCATGTTCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: MALVPMGPRPWW*RFTQDSSMFRM Trigger: CATCCGGAACATGGAGGAGTCCTGCGTGAATCTCAACCACCATGGTCTGGGCCCCATGGGTACCAAAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS CAA 90 bp | TCCTGGATGCAGTTGTCTCCCAGCTCCAGTTTGAGGACCGTAGTGTaGGACACCAGAGTTATAGCAATGGCTTTGGTACCCATGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SWMQLSPSSSLRTVV*DTRVIAMALVPMGP Trigger: GGGCCCCATGGGTACCAAAGCCATTGCTATAACTCTGGTGTCCAACACTACGGTCCTCAAACTGGAGCTGGGAGACAACTGCATCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS CCA 72 bp | ATAGCAATGGCTTTGGTACCCATGGGGCCCAGACCATaGTGGTTGAGATTCACGCAGGACTCCTCCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: IAMALVPMGPRP*WLRFTQDSSMF Trigger: GAACATGGAGGAGTCCTGCGTGAATCTCAACCACCATGGTCTGGGCCCCATGGGTACCAAAGCCATTGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095527.6 ENSMUST00000223308.2 |
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| CDS GCA 72 bp | GTTATTGTCAGACACGTTCTGAGAGGTAAGAACACATaGACGTGCAGGGAAGACTCGCACAGAGAGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VIVRHVLRGKNT*TCREDSHREAL Trigger: GAGAGCCTCTCTGTGCGAGTCTTCCCTGCACGTGCATGTGTTCTTACCTCTCAGAACGTGTCTGACAATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223197.2 |
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| CDS CAA 90 bp | CCCACCAGTTTGCAGGCCTCCAGGTACAGCTCCTTCTGTCCGATGTaGAAGAATTTCTCTGTGTCTTCAATTTCCAGGTCGGTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PTSLQASRYSSFCPM*KNFSVSSISRSVSE Trigger: TTCAGAAACCGACCTGGAAATTGAAGACACAGAGAAATTCTTCAACATCGGACAGAAGGAGCTGTACCTGGAGGCCTGCAAACTGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
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| CDS TCA 72 bp | GAATTTCTCTGTGTCTTCAATTTCCAGGTCGGTTTCTaGATCCTCCCGGGCAGATTTCTCTTTCTCAACACT | + |
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Preference number: 6 (lower is better) Translates to: EFLCVFNFQVGF*ILPGRFLFLNT Trigger: AGTGTTGAGAAAGAGAAATCTGCCCGGGAGGATTCAGAAACCGACCTGGAAATTGAAGACACAGAGAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095527.6 ENSMUST00000222180.2 ENSMUST00000223308.2 |
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