Pregenerated sensors for LRRC73 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071073Ensembl transcript IDs: ENSMUST00000095262.6, ENSMUST00000233543.2, ENSMUST00000233692.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACTGGGATCACTGGGGCACATCCAGGAGCTGCCACTCCGCTGGTaGGCAGCAGGCTCCCGCCCTCTCTCCCATTCCTGGGTGTCGGCA | + |
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Preference number: 1 (lower is better) Translates to: ELGSLGHIQELPLRW*AAGSRPLSHSWVSA Trigger: TGCCGACACCCAGGAATGGGAGAGAGGGCGGGAGCCTGCTGCCCACCAGCGGAGTGGCAGCTCCTGGATGTGCCCCAGTGATCCCAGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| 3UTR TCA 90 bp | TCAGCCAACAGACTGTCCCCTAGTCCTGATGTCATTAGCACCATCTaGGAACTGGGATCACTGGGGCACATCCAGGAGCTGCCACTCCGC | + |
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Preference number: 1 (lower is better) Translates to: SANRLSPSPDVISTI*ELGSLGHIQELPLR Trigger: GCGGAGTGGCAGCTCCTGGATGTGCCCCAGTGATCCCAGTTCTCAGATGGTGCTAATGACATCAGGACTAGGGGACAGTCTGTTGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGCCGCCACTACCAGGAGCTaGCAGAGCCCCAGCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LPSDSFQSLVPLPGAARAATTRS*QSPSQG Trigger: GCCCTGGCTGGGGCTCTGGCAGCTCCTGGTAGTGGC...GGCTCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGGCCACTACCAGGAGCTaGCAGAGCCCCAGCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: EPAGCSQSCQQVQSQYPGATTRS*QSPSQG Trigger: GCCCTGGCTGGGGCTCTGGCAGCTCCTGGTAGTGGC...CCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAACCCCTCAAGGCTGTTaGCCAGTGACAGCTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GCCPVTASRASCHYQELPTPQGC*PVTASR Trigger: TCTGGAAGCTGTCACTGGGCAACAGCCTTGAGGGGT...TGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCCACAGACAAATGCAATaGTGTGCAGAAGTCCAAGCG | + |
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Preference number: 2 (lower is better) Translates to: RLLPSDSFQSLVPLPGAAHRQMQ*CAEVQA Trigger: CGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTG...GGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATGGCACATCCAGGAGCTaGCACTCCGCTGGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VRTQTNAMLCRSPSGESHGTSRS*HSAGGQ Trigger: CTGCCCACCAGCGGAGTGGCAGCTCCTGGATGTGCC...ATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGACACAGACAAATGCAATaGTGTGCAGAAGTCCAAGCG | + |
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Preference number: 2 (lower is better) Translates to: LLPSDSFQSLVPLPGAARHRQMQ*CAEVQA Trigger: CGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTG...TCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGGAGGACACAGACAAATaGAATGCTGTGCAGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: CCPVTASRASCHYQELPEEDTDK*NAVQKS Trigger: GGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTC...CTCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACTGTCCCCTAGTCCTGATGTCATTAGCACCATCTGAGAACTGGGATCACGCCAGGGCCTTTCCCTaGTCTGTGGAGGAAGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: TDCPLVLMSLAPSENWDHARAFP*SVEEGS Trigger: ACTACCTTCCTCCACAGAGCAGGGAAAGGCCCTGGC...GTGATCCCAGTTCTCAGATGGTGCTAATGACATCAGGACTAGGGGACAGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAAGTCCCCTTTCCCTGCTCTGTaGAGGAAGGTAGTGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: GCSQSCQQVQSQYPGFKSPFPAL*RKVVRT Trigger: TGTCCTCACTACCTTCCTCCACAGAGCAGGGAAAGG...GGACTTGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAGAGGACACAGACAAATaGAATGCTGTGCAGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: QRVAARAANKFKVSTLGSEDTDK*NAVQKS Trigger: GGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTC...TGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGCCTTTCCCTGCTCTGTaGAGGAAGGTAGTGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: CSVEEGSEDTDKCNAVQKPFPAL*RKVVRT Trigger: TGTCCTCACTACCTTCCTCCACAGAGCAGGGAAAGG...CTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| 3UTR GCA 72 bp | CAAGGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTaGCACTACCAGGAGCTGCCAGAGCCCCAGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QGCCPVTASRAS*HYQELPEPQPG Trigger: CCCTGGCTGGGGCTCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| 3UTR CCA 72 bp | CCCCTAGTCCTGATGTCATTAGCACCATCTGAGAACTaGGATCACTGGGGCACATCCAGGAGCTGCCACTCC | + |
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Preference number: 3 (lower is better) Translates to: PLVLMSLAPSEN*DHWGTSRSCHS Trigger: GGAGTGGCAGCTCCTGGATGTGCCCCAGTGATCCCAGTTCTCAGATGGTGCTAATGACATCAGGACTAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| 3UTR GCA 72 bp | AAAATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTaGCAACAAGTTCAAAGTCAGTACCCTGGGTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: KICSEPAGCSQS*QQVQSQYPGFK Trigger: CTTGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR TCA 90 bp | GGCTCCCGCCCTCTCTCCCATTCCTGGGTGTCGGCAGCCCCTCCTGCCATCTCTCCGCACCTCGGCGCCTaGCAGCGGCTCCCCCGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GSRPLSHSWVSAAPPAISPHLGA*QRLPRN Trigger: ATTTCGGGGGAGCCGCTGTCAGGCGCCGAGGTGCGG...AGAGATGGCAGGAGGGGCTGCCGACACCCAGGAATGGGAGAGAGGGCGGGAGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS-3UTR CCA 90 bp | CCCCGCCACCCCTCAAGGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTGCCACTCCGCTGGTaGGCAGCAGGCTCCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PRHPSRLLPSDSFQSLVPLPLRW*AAGSRP Trigger: AGGGCGGGAGCCTGCTGCCCACCAGCGGAGTGGCAG...TGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCTTGAGGGGTGGCGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR CCA 90 bp | CCCGCCACCCCTCAAGGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACGAGCTGCCACTCCGCTaGTGGGCAGCAGGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: PATPQGCCPVTASRASCHELPLR*WAAGSR Trigger: GCGGGAGCCTGCTGCCCACCAGCGGAGTGGCAGCTC...GTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCTTGAGGGGTGGCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR TCA 90 bp | CCCGCCCTCTCTCCCATTCCTGGGTGTCGGCAGCCCCTCCTGCCATCTCTTCCTATGTCCAGCAGGGTCTaGGCTGACTGGTTGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PALSPIPGCRQPLLPSLPMSSRV*ADWLVS Trigger: GCTCACCAACCAGTCAGCTCAGACCCTGCTGGACAT...AGGAAGAGATGGCAGGAGGGGCTGCCGACACCCAGGAATGGGAGAGAGGGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS-3UTR GCA 90 bp | GGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCATACAGCCAGCATCCCTaGCACATGGTCGCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: GCCPVTASRASCHYQELPYSQHP*HMVAQG Trigger: CCCCTGGGCGACCATGTGGCAGGGATGCTGGCTGTA...TGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| CDS-3UTR GCA 90 bp | CTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGGCACATCCAGGAGCTaGCACTCCGCTGGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLPSDSFQSLVPLPGAARGTSRS*HSAGGQ Trigger: CTGCCCACCAGCGGAGTGGCAGCTCCTGGATGTGCC...TCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR CCA 90 bp | GGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCATGTGGGCCACAGCAATaGCGAGGCGGCTCCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: GCCPVTASRASCHYQELPCGPQQ*RGGSNP Trigger: AGGGTTGGAGCCGCCTCGCCATTGCTGTGGCCCACA...TGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| CDS-3UTR GCA 90 bp | CGCCCTCTCTCCCATTCCTGGGTGTCGGCAGCCCCTCCTGCCATCTCTTCCTCTAGGTTAAGGTTGAGCTaGGCCAGGGACGTGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RPLSHSWVSAAPPAISSSRLRLS*ARDVAP Trigger: TGGAGCCACGTCCCTGGCGCAGCTCAACCTTAACCT...AGAGGAAGAGATGGCAGGAGGGGCTGCCGACACCCAGGAATGGGAGAGAGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS-3UTR GCA 90 bp | CGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGGCACATCCAGGAGCTaGCACTCCGCTGGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RASGLQPELPTSSKSVPWGTSRS*HSAGGQ Trigger: CTGCCCACCAGCGGAGTGGCAGCTCCTGGATGTGCC...CCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR CCA 90 bp | GGGCCTTTCCCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGGCTGCGCCAGGGACGTaGCTCCAGCTAGGGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GPFPALWRKVVRTQTNAMAAPGT*LQLGPG Trigger: GCCGGGCCCTAGCTGGAGCCACGTCCCTGGCGCAGC...CATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGGGAAAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| CDS-3UTR CCA 90 bp | ACCCCTCAAGGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGTGGAGAGCCAGGGCTaGGTTCAGCAAGGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TPQGCCPVTASRASCHYQVESQG*VQQGQS Trigger: GGACTGGCCTTGCTGAACCCAGCCCTGGCTCTCCAC...CTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCTTGAGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR CCA 90 bp | CGCCCTCTCTCCCATTCCTGGGTGTCGGCAGCCCCTCCTGCCATCTCTTCCTCTACAAGAGGGACTGGATaGAGCGGTTGGTCCGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: RPLSHSWVSAAPPAISSSTRGTG*SGWSVA Trigger: CGCTACGGACCAACCGCTCCATCCAGTCCCTCTTGT...AGAGGAAGAGATGGCAGGAGGGGCTGCCGACACCCAGGAATGGGAGAGAGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS-3UTR CCA 90 bp | CCCGCCCTCTCTCCCATTCCTGGGTGTCGGCAGCCCCTCCTGCCATCTCTTCCTTCAGACAAGAGGGACTaGATGGAGCGGTTGGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: PALSPIPGCRQPLLPSLPSDKRD*MERLVR Trigger: ACGGACCAACCGCTCCATCCAGTCCCTCTTGTCTGA...AGGAAGAGATGGCAGGAGGGGCTGCCGACACCCAGGAATGGGAGAGAGGGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS-3UTR TCA 90 bp | AATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCACCGCACCTCGGCGCCTaGCAGCGGCTCCCCCGAAAT | + |
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Preference number: 4 (lower is better) Translates to: NLFRASGLQPELPTSSKSPHLGA*QRLPRN Trigger: ATTTCGGGGGAGCCGCTGTCAGGCGCCGAGGTGCGG...TGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR TCA 90 bp | GGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAATGTCCAGCAGGGTCTaGGCTGACTGGTTGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GCCPVTASRASCHYQELPMSSRV*ADWLVS Trigger: GCTCACCAACCAGTCAGCTCAGACCCTGCTGGACAT...TGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCCCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGGCTGCGCCAGGGACGTaGCTCCAGCTAGGGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: PFPALWRKVVRTQTNAMLAAPGT*LQLGPG Trigger: GCCGGGCCCTAGCTGGAGCCACGTCCCTGGCGCAGC...CAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGGGAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| CDS-3UTR CCA 90 bp | GGAGTTTATAAAATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGCTGCGCCAGGGACGTaGCTCCAGCTAGGGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GVYKICSEPAGCSQSCQQAAPGT*LQLGPG Trigger: GCCGGGCCCTAGCTGGAGCCACGTCCCTGGCGCAGC...TTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATTTTATAAACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR GCA 90 bp | ATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCAACAGACTCTAGGGCCCGGCAGATaGGGCCGAAGTCGCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: MLCRSPSGESHLSLSQQTLGPGR*GRSRGR Trigger: GCGACCGCGACTTCGGCCGCATCTGCCGGGCCCTAG...AGTCTGTTGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
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| CDS-3UTR CCA 90 bp | CCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGTTGAGGACGCGGACTTaGGAGCTGTGGGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSQRVAARAANKFKVSTLLRTRT*ELWATA Trigger: TGCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAA...CAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR CCA 90 bp | TTCCCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCGAGCTGCCACTCCGCTaGTGGGCAGCAGGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: FPALWRKVVRTQTNAMLCELPLR*WAAGSR Trigger: GCGGGAGCCTGCTGCCCACCAGCGGAGTGGCAGCTC...GCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR TCA 90 bp | GCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCGCACCTCGGCGCCTaGCAGCGGCTCCCCCGAAAT | + |
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Preference number: 4 (lower is better) Translates to: ALWRKVVRTQTNAMLCRSPHLGA*QRLPRN Trigger: ATTTCGGGGGAGCCGCTGTCAGGCGCCGAGGTGCGG...ACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| CDS-3UTR GCA 90 bp | AGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCCTAGGGCCCGGCAGATaGGGCCGAAGTCGCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: RTQTNAMLCRSPSGESHLLGPGR*GRSRGR Trigger: GCGACCGCGACTTCGGCCGCATCTGCCGGGCCCTAG...GAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
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| CDS-3UTR GCA 90 bp | AAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGCTAGGGCCCGGCAGATaGGGCCGAAGTCGCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: KVVRTQTNAMLCRSPSGELGPGR*GRSRGR Trigger: GCGACCGCGACTTCGGCCGCATCTGCCGGGCCCTAG...CTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| CDS-3UTR TCA 90 bp | GTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCAACAGACTGTCCCCAGCAGGGTCTGAGCTaGCTGGTTGGTGAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VQKSKRRVTSQSQPTDCPQQGLS*LVGEPC Trigger: ACAGGGCTCACCAACCAGTCAGCTCAGACCCTGCTG...GGGACAGTCTGTTGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS-3UTR TCA 90 bp | GGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAAGTCGAGCTGACTGGTTGGTaGGCCCTGTGCCCTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GLQPELPTSSKSVPWVQVELTGW*ALCPPS Trigger: ACTTGGAGGGCACAGGGCTCACCAACCAGTCAGCTC...GACTTGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR TCA 90 bp | CAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCATCCGCAAAGCTGAGCTaGCTGGTTGGTGAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: QRVAARAANKFKVSTLGSSAKLS*LVGEPC Trigger: ACAGGGCTCACCAACCAGTCAGCTCAGCTTTGCGGA...TGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095262.6 |
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| CDS-3UTR GCA 90 bp | GAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGCTTCATCACCCAACATaGAGTCCCCCAGGTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: EPAGCSQSCQQVQSQYPGLHHPT*SPPGQE Trigger: CTCTTGACCTGGGGGACTGCATGTTGGGTGATGAAG...CCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS-3UTR GCA 90 bp | AATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCAACAGACTACAGCCAGCATCCCTaGCACATGGTCGCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NAVQKSKRRVTSQSQPTDYSQHP*HMVAQG Trigger: CCCCTGGGCGACCATGTGGCAGGGATGCTGGCTGTA...GTCTGTTGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTCCCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGGTGGAGAGCCAGGGCTaGGTTCAGCAAGGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFPALWRKVVRTQTNAMLVESQG*VQQGQS Trigger: GGACTGGCCTTGCTGAACCCAGCCCTGGCTCTCCAC...CAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGGGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | GCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAAGCCTTCAGACCAGACTTaGCCCCGTCTGGAGGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGCSQSCQQVQSQYPGFKPSDQT*PRLEGV Trigger: TACTCCCTCCAGACGGGGCCAAGTCTGGTCTGAAGG...CTTGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCAACTGTGGGCCACAGCAATaGCGAGGCGGCTCCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: MQCCAEVQAESHISVSANCGPQQ*RGGSNP Trigger: AGGGTTGGAGCCGCCTCGCCATTGCTGTGGCCCACA...GTTGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR TCA 90 bp | AAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCATCCAACCCTTGGGGGTaGTGCCAGGGTTGGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KCNAVQKSKRRVTSQSQPSNPWG*CQGWRS Trigger: TGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGA...TGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR GCA 90 bp | GACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTACAGCCAGCATCCCTaGCACATGGTCGCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DTDKCNAVQKSKRRVTSQYSQHP*HMVAQG Trigger: CCCCTGGGCGACCATGTGGCAGGGATGCTGGCTGTA...CTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGATGTGGGCCACAGCAATaGCGAGGCGGCTCCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKVVRTQTNAMLCRSPSGCGPQQ*RGGSNP Trigger: AGGGTTGGAGCCGCCTCGCCATTGCTGTGGCCCACA...TCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAAGTCCCCGAGAACTGGGATCACTaGGGCACATCCAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPELPTSSKSVPWVQVPENWDH*GTSRSC Trigger: GCAGCTCCTGGATGTGCCCCAGTGATCCCAGTTCTC...GGGGACTTGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | CGCCACCCCTCAAGGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTAGCTCCGCAAAGCTGTTaGGTAATTTTCTACCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHPSRLLPSDSFQSLVPLAPQSC*VIFYHV Trigger: GACATGGTAGAAAATTACCCAACAGCTTTGCGGAGC...TAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCTTGAGGGGTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233692.2 |
||
| CDS-3UTR TCA 90 bp | AGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCATCCAACCCTTGGGGGTaGTGCCAGGGTTGGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQMQCCAEVQAESHISVSSNPWG*CQGWRS Trigger: TGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGA...TGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR TCA 90 bp | GACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGGAGCTGACTGGTTGGTaGGCCCTGTGCCCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTDKCNAVQKSKRRVTSQELTGW*ALCPPS Trigger: ACTTGGAGGGCACAGGGCTCACCAACCAGTCAGCTC...CTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR TCA 90 bp | CACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCGAGCTGACTGGTTGGTaGGCCCTGTGCCCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRQMQCCAEVQAESHISVELTGW*ALCPPS Trigger: ACTTGGAGGGCACAGGGCTCACCAACCAGTCAGCTC...GACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGCAGCAGGGTCTGAGCTaGCTGGTTGGTGAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVVRTQTNAMLCRSPSGEQQGLS*LVGEPC Trigger: ACAGGGCTCACCAACCAGTCAGCTCAGACCCTGCTG...CTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR GCA 90 bp | ATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCAACAGGTTAAGGTTGAGCTaGGCCAGGGACGTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MQCCAEVQAESHISVSANRLRLS*ARDVAP Trigger: TGGAGCCACGTCCCTGGCGCAGCTCAACCTTAACCT...GTTGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCAGCGCTTCTGCCAGCTaGTTGATGCGGCTGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: WRKVVRTQTNAMLCRSPSSASAS*LMRLGL Trigger: TAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCT...GCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAAGCGCTTCTGCCAGCTaGTTGATGCGGCTGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKVVRTQTNAMLCRSPSGSASAS*LMRLGL Trigger: TAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCT...TCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAAGCGCTTCTGCCAGCTaGTTGATGCGGCTGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EGSEDTDKCNAVQKSKRRSASAS*LMRLGL Trigger: TAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCT...TCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGCCTCACAAATCTGTTGTTaGAGCTCTGGACTAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSDSFQSLVPLPGAARASQICC*SSGLML Trigger: CAGCATTAGTCCAGAGCTGCAACAACAGATTTGTGA...GGCTCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTTATAAAATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAACTGGATGGAGCGGTTaGTCCGTAGCGCTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVYKICSEPAGCSQSCQQTGWSG*SVALLP Trigger: TGGCAGAAGCGCTACGGACCAACCGCTCCATCCAGT...TTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATTTTATAAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | CAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCGGAAGAGGGACTGGATaGAGCGGTTGGTCCGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTNAMLCRSPSGESHLSLGRGTG*SGWSVA Trigger: CGCTACGGACCAACCGCTCCATCCAGTCCCTCTTCC...GAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095262.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGGAAGAGGGACTGGATaGAGCGGTTGGTCCGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RKVVRTQTNAMLCRSPSGGRGTG*SGWSVA Trigger: CGCTACGGACCAACCGCTCCATCCAGTCCCTCTTCC...TCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | ACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCTTGAGGACGCGGACTTaGGAGCTGTGGGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNAMLCRSPSGESHLSLSLRTRT*ELWATA Trigger: TGCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAA...GCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATAAAATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTTTGAGGACGCGGACTTaGGAGCTGTGGGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VYKICSEPAGCSQSCQQVLRTRT*ELWATA Trigger: TGCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAA...AACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATTTTATAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR TCA 90 bp | AATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTCATTAGCACCATCTaGGAACTGGGATCACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLFRASGLQPELPTSSKSVISTI*ELGSLG Trigger: CCCCAGTGATCCCAGTTCTCAGATGGTGCTAATGAC...TGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233692.2 |
||
| CDS-3UTR GCA 90 bp | AATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCACTTCATCACCCAACATaGAGTCCCCCAGGTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLFRASGLQPELPTSSKSLHHPT*SPPGQE Trigger: CTCTTGACCTGGGGGACTGCATGTTGGGTGATGAAG...TGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | AGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCACTGGATGGAGCGGTTaGTCCGTAGCGCTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTQTNAMLCRSPSGESHLTGWSG*SVALLP Trigger: TGGCAGAAGCGCTACGGACCAACCGCTCCATCCAGT...GAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGATGTAGGAAGAGGGACTaGATGGAGCGGTTGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PALWRKVVRTQTNAMLCRCRKRD*MERLVR Trigger: ACGGACCAACCGCTCCATCCAGTCCCTCTTCCTACA...TCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGCCTTCAGACCAGACTTaGCCCCGTCTGGAGGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSVEEGSEDTDKCNAVQKPSDQT*PRLEGV Trigger: TACTCCCTCCAGACGGGGCCAAGTCTGGTCTGAAGG...CTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | AGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCGAGAACTGGGATCACTaGGGCACATCCAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQTNAMLCRSPSGESHLENWDH*GTSRSC Trigger: GCAGCTCCTGGATGTGCCCCAGTGATCCCAGTTCTC...GAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095262.6 |
||
| CDS-3UTR CCA 90 bp | GCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTTGTAGGAAGAGGGACTaGATGGAGCGGTTGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ALWRKVVRTQTNAMLCRSCRKRD*MERLVR Trigger: ACGGACCAACCGCTCCATCCAGTCCCTCTTCCTACA...ACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | CACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCCTGTTGTTGCAGCTCTaGACTAATGCTGTTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRQMQCCAEVQAESHISVLLLQL*TNAVLG Trigger: GCCGAGAACAGCATTAGTCCAGAGCTGCAACAACAG...GACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095262.6 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGCTGTTGTTGCAGCTCTaGACTAATGCTGTTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVEEGSEDTDKCNAVQKLLLQL*TNAVLG Trigger: GCCGAGAACAGCATTAGTCCAGAGCTGCAACAACAG...CTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCGCTCCGCAAAGCTGTTaGGTAATTTTCTACCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPALWRKVVRTQTNAMLCAPQSC*VIFYHV Trigger: GACATGGTAGAAAATTACCCAACAGCTTTGCGGAGC...GCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGATCACAAATCTGTTGTTaGAGCTCTGGACTAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVVRTQTNAMLCRSPSGSQICC*SSGLML Trigger: CAGCATTAGTCCAGAGCTGCAACAACAGATTTGTGA...TCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGCCCCAGAGCAGGCGCACCGCGTaGTCGCGCAGGCCGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVTASRASCHYQELPEPQSRRTA*SRRPRQ Trigger: CTGCCGCGGCCTGCGCGACAACGCGGTGCGCCTGCT...CTGGGGCTCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS GCA 90 bp | TTGATGCGGCTGGGGCTAGACACGACGCCCAGGTTAAGGTTGAGCTaGGCCAGGGACGTGGCTCCAGCTAGGGCCCGGCAGATGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LMRLGLDTTPRLRLS*ARDVAPARARQMRP Trigger: CGGCCGCATCTGCCGGGCCCTAGCTGGAGCCACGTCCCTGGCGCAGCTCAACCTTAACCTGGGCGTCGTGTCTAGCCCCAGCCGCATCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGAGCAGGCGCACCGCGTaGTCGCGCAGGCCGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EPAGCSQSCQQVQSQYPGSRRTA*SRRPRQ Trigger: CTGCCGCGGCCTGCGCGACAACGCGGTGCGCCTGCT...CCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS TCA 90 bp | CCAGCATCCCTGCCACATGGTCGCCCAGGGGGTTGTAGTCCAGGTTaGGGACGCGGACTTGGGAGCTGTGGGCCACAGCAATGGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PASLPHGRPGGCSPG*GRGLGSCGPQQWRG Trigger: GCCTCGCCATTGCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAACCTGGACTACAACCCCCTGGGCGACCATGTGGCAGGGATGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CCA 90 bp | GTCCCCCAGGTCAAGAGCCACAAGGGCAGGGTGGAGAGCCAGGGCTaGGTTCAGCAAGGCCAGTCCCGCATCTGTCAGTGGGCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VPQVKSHKGRVESQG*VQQGQSRICQWAPM Trigger: CATGGGAGCCCACTGACAGATGCGGGACTGGCCTTGCTGAACCCAGCCCTGGCTCTCCACCCTGCCCTTGTGGCTCTTGACCTGGGGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | CGCCCTCTCTCCCATTCCTGGGTGTCGGCAGCCCCTCCTGCCATCTCTTCCTCTGCTTCTGCCAGCTGCTaGATGCGGCTGGGGCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPLSHSWVSAAPPAISSSASASC*MRLGLD Trigger: GTCTAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGC...AGAGGAAGAGATGGCAGGAGGGGCTGCCGACACCCAGGAATGGGAGAGAGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGCCCCAGCCAGGGCCTTTGCTTCTGCCAGCTGCTaGATGCGGCTGGGGCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FQSLVPLPGAARAPARAFASASC*MRLGLD Trigger: GTCTAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGC...AAAGGCCCTGGCTGGGGCTCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCGACTGGATGGAGCGGTaGGTCCGTAGCGCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLPSDSFQSLVPLPGAADWMER*VRSASA Trigger: GGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTC...GGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGGGGTGATGCCAGGGTaGGCGCTCAGTGTTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCCPVTASRASCHYQELPGVMPG*ALSVSS Trigger: GGAGCTAACACTGAGCGCCAACCCTGGCATCACCCC...TGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGCCGGGGTGATGCCAGGGTaGGCGCTCAGTGTTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPSDSFQSLVPLPGAARAGVMPG*ALSVSS Trigger: GGAGCTAACACTGAGCGCCAACCCTGGCATCACCCC...GGCTCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS TCA 90 bp | AGCTGTGGGCCACAGCAATGGCGAGGCGGCTCCAACCCTTGGGGGTaGTGCCAGGGTTGGCGCTCAGTGTTAGCTCCTTCAGACCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SCGPQQWRGGSNPWG*CQGWRSVLAPSDQT Trigger: AGTCTGGTCTGAAGGAGCTAACACTGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGAGCCGCCTCGCCATTGCTGTGGCCCACAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS TCA 90 bp | AGCTGTGGGCCACAGCAATGGCGAGGCGGCTCCAACCCTTGGGGGTaGTGCCAGGGTTGGCGCTCAGTGTTAGCTCCTTCAGACAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCGPQQWRGGSNPWG*CQGWRSVLAPSDKR Trigger: CCTCTTGTCTGAAGGAGCTAACACTGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGAGCCGCCTCGCCATTGCTGTGGCCCACAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCAACAGACTAGCAGGCGCACCGCGTaGTCGCGCAGGCCGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLCRSPSGESHLSLSQQTSRRTA*SRRPRQ Trigger: CTGCCGCGGCCTGCGCGACAACGCGGTGCGCCTGCT...AGTCTGTTGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCAT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGGGGTGATGCCAGGGTaGGCGCTCAGTGTTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSDSFQSLVPLPGAARGVMPG*ALSVSS Trigger: GGAGCTAACACTGAGCGCCAACCCTGGCATCACCCC...TCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS GCA 90 bp | AAGAGGGACTGGATGGAGCGGTTGGTCCGTAGCGCTTCTGCCAGCTaGTTGATGCGGCTGGGGCTAGACACGACGCCCAGGTTAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRDWMERLVRSASAS*LMRLGLDTTPRLRL Trigger: CAACCTTAACCTGGGCGTCGTGTCTAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTCCCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTGACTGGATGGAGCGGTaGGTCCGTAGCGCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQRVAARAANKFKVSTLGDWMER*VRSASA Trigger: GGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTC...ACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | CAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAGCTTCTGCCAGCTGCTaGATGCGGCTGGGGCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QRVAARAANKFKVSTLGSASASC*MRLGLD Trigger: GTCTAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGC...TGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | TTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAAGTCCCCGTTGAGGACGCGGACTaGGGAGCTGTGGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQPELPTSSKSVPWVQVPVEDAD*GAVGHS Trigger: GCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAAC...GGGGACTTGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | CCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGCTTCTAGGGTACGGCTaGAGGCCACAGCTACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSQRVAARAANKFKVSTLLLGYG*RPQLQP Trigger: TGGCTGTAGCTGTGGCCTCAAGCCGTACCCTAGAAG...CAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | CCCGCCACCCCTCAAGGCTGTTGCCCAGTGACAGCTTCCAGAGCCTCGTGCCACGAGGTCACAAATCTGTaGTTGCAGCTCTGGACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PATPQGCCPVTASRASCHEVTNL*LQLWTN Trigger: ATTAGTCCAGAGCTGCAACAACAGATTTGTGACCTC...GTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCTTGAGGGGTGGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTGACAGCTTCCAGAGCCTCGTGCCACTACCAGGAGCTGCCAGAGCCCCAGGGCTCCGCAAAGCTGTaGGGTAATTTTCTACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PVTASRASCHYQELPEPQGSAKL*GNFLPC Trigger: ACATGGTAGAAAATTACCCAACAGCTTTGCGGAGCC...CTGGGGCTCTGGCAGCTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | ATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCAACACGCCCAGGTTAAGGTaGAGCTGCGCCAGGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: MQCCAEVQAESHISVSANTPRLR*SCARDV Trigger: CACGTCCCTGGCGCAGCTCAACCTTAACCTGGGCGT...GTTGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAACGCCCAGGTTAAGGTaGAGCTGCGCCAGGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: PALWRKVVRTQTNAMLCRTPRLR*SCARDV Trigger: CACGTCCCTGGCGCAGCTCAACCTTAACCTGGGCGT...TCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTCAGTCTCAGCCAACAGACTGACTGGATGGAGCGGTaGGTCCGTAGCGCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLCRSPSGESHLSLSQQTDWMER*VRSASA Trigger: GGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTC...AGTCTGTTGGCTGAGACTGAGATGTGACTCTCCGCTTGGACTTCTGCACAGCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTTGAGGACGCGGACTaGGGAGCTGTGGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IKSVPSQRVAARAANKFKVEDAD*GAVGHS Trigger: GCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAAC...TTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGGTTGAGGACGCGGACTaGGGAGCTGTGGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSVEEGSEDTDKCNAVQKVEDAD*GAVGHS Trigger: GCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAAC...CTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS GCA 90 bp | TCTTCCTCTTCCTCCCCCTCAGATAGGAGGTCACAAATCTGTTGTTaGAGCTCTGGACTAATGCTGTTCTCGGCCAACACCAGGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSPSDRRSQICC*SSGLMLFSANTRLR Trigger: GCGGAGCCTGGTGTTGGCCGAGAACAGCATTAGTCCAGAGCTGCAACAACAGATTTGTGACCTCCTATCTGAGGGGGAGGAAGAGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | GCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAAGAGGCCACAGATGAGGTaGATGGCTTCATCACCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGCSQSCQQVQSQYPGFKRPQMR*MASSPN Trigger: GTTGGGTGATGAAGCCATCAACCTCATCTGTGGCCT...CTTGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | GTTTATAAAATCTGTTCCGAGCCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCTTCTAGGGTACGGCTaGAGGCCACAGCTACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VYKICSEPAGCSQSCQQVLLGYG*RPQLQP Trigger: TGGCTGTAGCTGTGGCCTCAAGCCGTACCCTAGAAG...AACTTGTTGGCAGCTCTGGCTGCAACCCGCTGGCTCGGAACAGATTTTATAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTCCAAGCGGAGAGTCACATCTTCTAGGGTACGGCTaGAGGCCACAGCTACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VRTQTNAMLCRSPSGESHLLGYG*RPQLQP Trigger: TGGCTGTAGCTGTGGCCTCAAGCCGTACCCTAGAAG...ATGTGACTCTCCGCTTGGACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCGGGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCGTCACAAATCTGTTGTaGCAGCTCTGGACTAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAGCSQSCQQVQSQYPGFVTNLL*QLWTNA Trigger: AGCATTAGTCCAGAGCTGCAACAACAGATTTGTGAC...GAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACCCGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAAGTAGGCCACAGATGAGGTaGATGGCTTCATCACCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALWRKVVRTQTNAMLCRSRPQMR*MASSPN Trigger: GTTGGGTGATGAAGCCATCAACCTCATCTGTGGCCT...ACTTCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | GGTTGCAGCCAGAGCTGCCAACAAGTTCAAAGTCAGTACCCTGGGTTCAAGTCCGAGGTCACAAATCTGTaGTTGCAGCTCTGGACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GCSQSCQQVQSQYPGFKSEVTNL*LQLWTN Trigger: ATTAGTCCAGAGCTGCAACAACAGATTTGTGACCTC...GGACTTGAACCCAGGGTACTGACTTTGAACTTGTTGGCAGCTCTGGCTGCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCAGAGGCTCCGCAAAGCTGTaGGGTAATTTTCTACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PALWRKVVRTQTNAMLCRGSAKL*GNFLPC Trigger: ACATGGTAGAAAATTACCCAACAGCTTTGCGGAGCC...TCTGCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGCTCTGTGGAGGAAGGTAGTGAGGACACAGACAAATGCAATGCTGTGCGTCACAAATCTGTTGTaGCAGCTCTGGACTAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPALWRKVVRTQTNAMLCVTNLL*QLWTNA Trigger: AGCATTAGTCCAGAGCTGCAACAACAGATTTGTGAC...GCACAGCATTGCATTTGTCTGTGTCCTCACTACCTTCCTCCACAGAGCAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS GCA 72 bp | GCGCCAGGGACGTGGCTCCAGCTAGGGCCCGGCAGATaGGGCCGAAGTCGCGGTCGCACAGGCGACAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: APGTWLQLGPGR*GRSRGRTGDSR Trigger: GCGGCTGTCGCCTGTGCGACCGCGACTTCGGCCGCATCTGCCGGGCCCTAGCTGGAGCCACGTCCCTGGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS GCA 72 bp | CTGGGGCTAGACACGACGCCCAGGTTAAGGTTGAGCTaGGCCAGGGACGTGGCTCCAGCTAGGGCCCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGLDTTPRLRLS*ARDVAPARARQ Trigger: CTGCCGGGCCCTAGCTGGAGCCACGTCCCTGGCGCAGCTCAACCTTAACCTGGGCGTCGTGTCTAGCCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 72 bp | ATGCGGCTGGGGCTAGACACGACGCCCAGGTTAAGGTaGAGCTGCGCCAGGGACGTGGCTCCAGCTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MRLGLDTTPRLR*SCARDVAPARA Trigger: GGCCCTAGCTGGAGCCACGTCCCTGGCGCAGCTCAACCTTAACCTGGGCGTCGTGTCTAGCCCCAGCCGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 72 bp | GCCCAGGGGGTTGTAGTCCAGGTTGAGGACGCGGACTaGGGAGCTGTGGGCCACAGCAATGGCGAGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AQGVVVQVEDAD*GAVGHSNGEAA Trigger: AGCCGCCTCGCCATTGCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAACCTGGACTACAACCCCCTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 90 bp | AGCTGCTTGATGCGGCTGGGGCTAGACACGACGCCCAGGTTAAGGTaGAGCTGCGCCAGGGACGTGGCTCCAGCTAGGGCCCGGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SCLMRLGLDTTPRLR*SCARDVAPARARQM Trigger: CATCTGCCGGGCCCTAGCTGGAGCCACGTCCCTGGCGCAGCTCAACCTTAACCTGGGCGTCGTGTCTAGCCCCAGCCGCATCAAGCAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS GCA 72 bp | TGGATGGAGCGGTTGGTCCGTAGCGCTTCTGCCAGCTaGTTGATGCGGCTGGGGCTAGACACGACGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WMERLVRSASAS*LMRLGLDTTPR Trigger: CCTGGGCGTCGTGTCTAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCTACGGACCAACCGCTCCATCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 72 bp | CTGTGGGCCACAGCAATGGCGAGGCGGCTCCAACCCTaGGGGGTGATGCCAGGGTTGGCGCTCAGTGTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LWATAMARRLQP*GVMPGLALSVS Trigger: GCTAACACTGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGAGCCGCCTCGCCATTGCTGTGGCCCACAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 90 bp | CACATGGTCGCCCAGGGGGTTGTAGTCCAGGTTGAGGACGCGGACTaGGGAGCTGTGGGCCACAGCAATGGCGAGGCGGCTCCAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HMVAQGVVVQVEDAD*GAVGHSNGEAAPTL Trigger: AAGGGTTGGAGCCGCCTCGCCATTGCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAACCTGGACTACAACCCCCTGGGCGACCATGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS TCA 72 bp | CTGCCACATGGTCGCCCAGGGGGTTGTAGTCCAGGTTaGGGACGCGGACTTGGGAGCTGTGGGCCACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LPHGRPGGCSPG*GRGLGSCGPQQ Trigger: TTGCTGTGGCCCACAGCTCCCAAGTCCGCGTCCTCAACCTGGACTACAACCCCCTGGGCGACCATGTGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 90 bp | AGGGACTGGATGGAGCGGTTGGTCCGTAGCGCTTCTGCCAGCTGCTaGATGCGGCTGGGGCTAGACACGACGCCCAGGTTAAGGTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RDWMERLVRSASASC*MRLGLDTTPRLRLS Trigger: GCTCAACCTTAACCTGGGCGTCGTGTCTAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 90 bp | ACAGCAATGGCGAGGCGGCTCCAACCCTTGGGGGTGATGCCAGGGTaGGCGCTCAGTGTTAGCTCCTTCAGACCAGACTTGGCCCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TAMARRLQPLGVMPG*ALSVSSFRPDLAPS Trigger: AGACGGGGCCAAGTCTGGTCTGAAGGAGCTAACACTGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGAGCCGCCTCGCCATTGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS CAA 90 bp | ACTTGGGAGCTGTGGGCCACAGCAATGGCGAGGCGGCTCCAACCCTaGGGGGTGATGCCAGGGTTGGCGCTCAGTGTTAGCTCCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TWELWATAMARRLQP*GVMPGLALSVSSFR Trigger: TCTGAAGGAGCTAACACTGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGAGCCGCCTCGCCATTGCTGTGGCCCACAGCTCCCAAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS TCA 72 bp | CCACAGCAATGGCGAGGCGGCTCCAACCCTTGGGGGTaGTGCCAGGGTTGGCGCTCAGTGTTAGCTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PQQWRGGSNPWG*CQGWRSVLAPS Trigger: TGAAGGAGCTAACACTGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGAGCCGCCTCGCCATTGCTGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 72 bp | ATGGAGCGGTTGGTCCGTAGCGCTTCTGCCAGCTGCTaGATGCGGCTGGGGCTAGACACGACGCCCAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: MERLVRSASASC*MRLGLDTTPRL Trigger: TAACCTGGGCGTCGTGTCTAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCTACGGACCAACCGCTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095262.6 ENSMUST00000233543.2 ENSMUST00000233692.2 |
||
| CDS CAA 90 bp | TCTGTCAGTGGGCTCCCATGTAGGAAGAGGGACTGGATGGAGCGGTaGGTCCGTAGCGCTTCTGCCAGCTGCTTGATGCGGCTGGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SVSGLPCRKRDWMER*VRSASASCLMRLGL Trigger: TAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTCCCTCTTCCTACATGGGAGCCCACTGACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
||
| CDS CAA 90 bp | CGCTCAGTGTTAGCTCCTTCAGACAAGAGGGACTGGATGGAGCGGTaGGTCCGTAGCGCTTCTGCCAGCTGCTTGATGCGGCTGGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RSVLAPSDKRDWMER*VRSASASCLMRLGL Trigger: TAGCCCCAGCCGCATCAAGCAGCTGGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTCCCTCTTGTCTGAAGGAGCTAACACTGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
||
| CDS CAA 90 bp | ACAGCAATGGCGAGGCGGCTCCAACCCTTGGGGGTGATGCCAGGGTaGGCGCTCAGTGTTAGCTCCTTCAGACAAGAGGGACTGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: TAMARRLQPLGVMPG*ALSVSSFRQEGLDG Trigger: TCCATCCAGTCCCTCTTGTCTGAAGGAGCTAACACTGAGCGCCAACCCTGGCATCACCCCCAAGGGTTGGAGCCGCCTCGCCATTGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS CCA 72 bp | TGGCGCTCAGTGTTAGCTCCTTCAGACAAGAGGGACTaGATGGAGCGGTTGGTCCGTAGCGCTTCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: WRSVLAPSDKRD*MERLVRSASAS Trigger: GCTGGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTCCCTCTTGTCTGAAGGAGCTAACACTGAGCGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS CAA 90 bp | AGACCAGACTTGGCCCCGTCTGGAGGGAGTAGGCCACAGATGAGGTaGATGGCTTCATCACCCAACATGCAGTCCCCCAGGTCAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RPDLAPSGGSRPQMR*MASSPNMQSPRSRA Trigger: GGCTCTTGACCTGGGGGACTGCATGTTGGGTGATGAAGCCATCAACCTCATCTGTGGCCTACTCCCTCCAGACGGGGCCAAGTCTGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095262.6 ENSMUST00000233692.2 |
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| CDS TCA 72 bp | AACACCAGGCTCCGCAAAGCTGAGCTGACTGGTTGGTaGGCCCTGTGCCCTCCAAGTCTAGGACTTCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: NTRLRKAELTGW*ALCPPSLGLLG Trigger: CCCTAGAAGTCCTAGACTTGGAGGGCACAGGGCTCACCAACCAGTCAGCTCAGCTTTGCGGAGCCTGGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095262.6 |
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| CDS CAA 72 bp | TTAGCTCCTTCAGACAAGAGGGACTGGATGGAGCGGTaGGTCCGTAGCGCTTCTGCCAGCTGCTTGATGCGG | + |
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Preference number: 6 (lower is better) Translates to: LAPSDKRDWMER*VRSASASCLMR Trigger: CCGCATCAAGCAGCTGGCAGAAGCGCTACGGACCAACCGCTCCATCCAGTCCCTCTTGTCTGAAGGAGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233543.2 |
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| CDS CCA 72 bp | GCTGTTCTCGGCCAACACCAGGCTCCGCAAAGCTGTTaGGTAATTTTCTACCATGTCCAGCAGGGTCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: AVLGQHQAPQSC*VIFYHVQQGLS Trigger: GCTCAGACCCTGCTGGACATGGTAGAAAATTACCCAACAGCTTTGCGGAGCCTGGTGTTGGCCGAGAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233543.2 ENSMUST00000233692.2 |
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| CDS CAA 72 bp | TGCTGTTCTCGGCCAACACCAGGCTCCGCAAAGCTGTaGGGTAATTTTCTACCATGTCCAGCAGGGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: CCSRPTPGSAKL*GNFLPCPAGSE Trigger: CTCAGACCCTGCTGGACATGGTAGAAAATTACCCAACAGCTTTGCGGAGCCTGGTGTTGGCCGAGAACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233543.2 ENSMUST00000233692.2 |
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