RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC72 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020545

Ensembl transcript IDs: ENSMUST00000020853.8, ENSMUST00000221155.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp TCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGAGGGAGTCCAGTTCATGCTGGTaGACGTCATCAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: SILKIRVATNVHGAKSRESSSCW*TSSGIS
Trigger: AGAGATCCCTGATGACGTTCACCAGCATGAACTGGA...CTCCCTCGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR CCA 90 bp TTCACTACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGATGCCTTCAGGCTGCTTaGCAGAGCATTTTCCACCGA +
Preference number: 4 (lower is better)
Translates to: FTTDSSILKIRVATNVHGCLQAA*QSIFHR
Trigger: TCGGTGGAAAATGCTCTGCCAAGCAGCCTGAAGGCA...TCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGTAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR TCA 90 bp TTCACTACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGATCCAGTTCATGCTGGTaGACGTCATCAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FTTDSSILKIRVATNVHGSSSCW*TSSGIS
Trigger: AGAGATCCCTGATGACGTTCACCAGCATGAACTGGA...TCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGTAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR TCA 90 bp TCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGAGGGAGCCACATATCTTTAGCTaGTCTTCAACTGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SILKIRVATNVHGAKSREPHIFS*SSTAFR
Trigger: CCTGAAGGCAGTTGAAGATCAGCTAAAGATATGTGG...CTCCCTCGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR CCA 90 bp GACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGGCTTTATTGGTAACTTaGGGTTCCAGGAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: DSSILKIRVATNVHGAKSALLVT*GSRRHP
Trigger: TGGATGCCTCCTGGAACCCCAAGTTACCAATAAAGC...CGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR TCA 90 bp TCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGAGGGAGCCGTGTAGCTTATTGTaGTGGAGCCACAAATATCTT +
Preference number: 4 (lower is better)
Translates to: SILKIRVATNVHGAKSREPCSLL*WSHKYL
Trigger: AAGATATTTGTGGCTCCATCACAATAAGCTACACGG...CTCCCTCGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR TCA 90 bp GACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGCAGGAGAATATTCAGTaGAGGCAAATTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: DSSILKIRVATNVHGAKSQENIQ*RQIMQA
Trigger: GGCCTGCATAATTTGCCTTCACTGAATATTCTCCTG...CGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR CCA 90 bp TTCACTACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTTTATTGGTAACTTaGGGTTCCAGGAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: FTTDSSILKIRVATNVHGALLVT*GSRRHP
Trigger: TGGATGCCTCCTGGAACCCCAAGTTACCAATAAAGC...TCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGTAGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR CCA 90 bp GACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGTCCAGTCCGGGAAGGTaGAAGATTATATACAATCGG +
Preference number: 4 (lower is better)
Translates to: DSSILKIRVATNVHGAKSSSPGR*KIIYNR
Trigger: CCGATTGTATATAATCTTCCACCTTCCCGGACTGGA...CGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR GCA 90 bp GACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGGTGAGCTCATTGTGGTaGAACAGGAGAATATTCAGT +
Preference number: 4 (lower is better)
Translates to: DSSILKIRVATNVHGAKSVSSLW*NRRIFS
Trigger: ACTGAATATTCTCCTGTTGCACCACAATGAGCTCAC...CGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR CCA 90 bp GACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGAAACACAGCATCTTCTaGGTCATCAAACAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: DSSILKIRVATNVHGAKSKHSIF*VIKQCL
Trigger: AAGACACTGTTTGATGACCCAGAAGATGCTGTGTTT...CGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR CCA 90 bp ACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAAAAACACAGCATCTTCTaGGTCATCAAACAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TDSSILKIRVATNVHGAKKHSIF*VIKQCL
Trigger: AAGACACTGTTTGATGACCCAGAAGATGCTGTGTTT...TTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR CCA 90 bp ACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAAGAGCTCTTTTTCTTCTaGTCATACTTTTCACTTCGT +
Preference number: 4 (lower is better)
Translates to: TDSSILKIRVATNVHGAKELFFF*SYFSLR
Trigger: ACGAAGTGAAAAGTATGACCAGAAGAAAAAGAGCTC...TTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS CCA 90 bp CCCTTCAGCTCCTTCATAGTAGCATCGATGTTTGTGAGCTCATTGTaGTGCAACAGGAGAATATTCAGTGAAGGCAAATTATGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: PFSSFIVASMFVSSL*CNRRIFSEGKLCRP
Trigger: AGGCCTGCATAATTTGCCTTCACTGAATATTCTCCTGTTGCACCACAATGAGCTCACAAACATCGATGCTACTATGAAGGAGCTGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR CAA 90 bp ACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAACTGCCTTCAGGCTGCTaGGCAGAGCATTTTCCACCG +
Preference number: 5 (lower is better)
Translates to: TDSSILKIRVATNVHGAKLPSGC*AEHFPP
Trigger: CGGTGGAAAATGCTCTGCCAAGCAGCCTGAAGGCAG...TTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS GCA 90 bp TTCAGCTCCTTCATAGTAGCATCGATGTTTGTGAGCTCATTGTGGTaGAACAGGAGAATATTCAGTGAAGGCAAATTATGCAGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: FSSFIVASMFVSSLW*NRRIFSEGKLCRPS
Trigger: AGAAGGCCTGCATAATTTGCCTTCACTGAATATTCTCCTGTTGCACCACAATGAGCTCACAAACATCGATGCTACTATGAAGGAGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS CCA 90 bp CGTCATCAGGGATCTCTTCGTGGATCTTACAAACACAGCATCTTCTaGGTCATCAAACAGTGTCTTGTCAACATTATCCCCAAATGCAAA +
Preference number: 5 (lower is better)
Translates to: RHQGSLRGSYKHSIF*VIKQCLVNIIPKCK
Trigger: TTTGCATTTGGGGATAATGTTGACAAGACACTGTTTGATGACCCAGAAGATGCTGTGTTTGTAAGATCCACGAAGAGATCCCTGATGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR CAA 90 bp TCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGAGGGAGCCCGCTTTTGCTTTATaGGTAACTTGGGGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SILKIRVATNVHGAKSREPAFAL*VTWGSR
Trigger: CCTGGAACCCCAAGTTACCAATAAAGCAAAAGCGGG...CTCCCTCGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR CAA 90 bp TTCACTACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGACCCGCTTTTGCTTTATaGGTAACTTGGGGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: FTTDSSILKIRVATNVHGPAFAL*VTWGSR
Trigger: CCTGGAACCCCAAGTTACCAATAAAGCAAAAGCGGG...TCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGTAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR CAA 90 bp ACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAAACGTCAATATCCCTCTaGTGGCCACATATCTTTAGC +
Preference number: 5 (lower is better)
Translates to: TDSSILKIRVATNVHGAKTSISL*WPHIFS
Trigger: GCTAAAGATATGTGGCCACAAGAGGGATATTGACGT...TTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR CAA 90 bp TCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAATCGAGGGAGCTCTTTCTCTGTAATTaGTTTCCGATCAAGCAACTC +
Preference number: 5 (lower is better)
Translates to: SILKIRVATNVHGAKSRELFLCN*FPIKQL
Trigger: GAGTTGCTTGATCGGAAACAAATTACAGAGAAAGAG...CTCCCTCGATTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS-3UTR CAA 90 bp TTCACTACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGATCATCAAACAGTGTCTaGTCAACATTATCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: FTTDSSILKIRVATNVHGSSNSV*STLSPN
Trigger: ATTTGGGGATAATGTTGACAAGACACTGTTTGATGA...TCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGTAGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS-3UTR CAA 90 bp ACTGACTCTTCTATTTTAAAAATTCGGGTAGCAACAAATGTACACGGAGCTAAAATCTCAAATATTGCATaGTTGTTCAGATACAGCTCG +
Preference number: 5 (lower is better)
Translates to: TDSSILKIRVATNVHGAKISNIA*LFRYSS
Trigger: CGAGCTGTATCTGAACAACAATGCAATATTTGAGAT...TTTAGCTCCGTGTACATTTGTTGCTACCCGAATTTTTAAAATAGAAGAGTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS TCA 72 bp ACGTCAATATCCCTCTTGTGGCCACATATCTTTAGCTaGTCTTCAACTGCCTTCAGGCTGCTTGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: TSISLLWPHIFS*SSTAFRLLGRA
Trigger: TGCTCTGCCAAGCAGCCTGAAGGCAGTTGAAGATCAGCTAAAGATATGTGGCCACAAGAGGGATATTGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS CCA 72 bp ATCATGAGCATCTCAGCGGCCGAGCTCTTTTTCTTCTaGTCATACTTTTCACTTCGTGTTAGAACGGTGTTC +
Preference number: 6 (lower is better)
Translates to: IMSISAAELFFF*SYFSLRVRTVF
Trigger: GAACACCGTTCTAACACGAAGTGAAAAGTATGACCAGAAGAAAAAGAGCTCGGCCGCTGAGATGCTCATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS CAA 90 bp ATCCCCTTCAGCTCCTTCATAGTAGCATCGATGTTTGTGAGCTCATaGTGGTGCAACAGGAGAATATTCAGTGAAGGCAAATTATGCAGG +
Preference number: 6 (lower is better)
Translates to: IPFSSFIVASMFVSS*WCNRRIFSEGKLCR
Trigger: CCTGCATAATTTGCCTTCACTGAATATTCTCCTGTTGCACCACAATGAGCTCACAAACATCGATGCTACTATGAAGGAGCTGAAGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS CCA 72 bp GGATCTCTTCGTGGATCTTACAAACACAGCATCTTCTaGGTCATCAAACAGTGTCTTGTCAACATTATCCCC +
Preference number: 6 (lower is better)
Translates to: GSLRGSYKHSIF*VIKQCLVNIIP
Trigger: GGGGATAATGTTGACAAGACACTGTTTGATGACCCAGAAGATGCTGTGTTTGTAAGATCCACGAAGAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020853.8
ENSMUST00000221155.2
CDS CAA 90 bp GAATATTCAGTGAAGGCAAATTATGCAGGCCTTCTATCTCAAATATaGCATTGTTGTTCAGATACAGCTCGGTCAGACAATAGTTCCGAG +
Preference number: 6 (lower is better)
Translates to: EYSVKANYAGLLSQI*HCCSDTARSDNSSE
Trigger: CTCGGAACTATTGTCTGACCGAGCTGTATCTGAACAACAATGCAATATTTGAGATAGAAGGCCTGCATAATTTGCCTTCACTGAATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS TCA 72 bp TGTGAGCTCATTGTGGTGCAACAGGAGAATATTCAGTaGAGGCAAATTATGCAGGCCTTCTATCTCAAATAT +
Preference number: 6 (lower is better)
Translates to: CELIVVQQENIQ*RQIMQAFYLKY
Trigger: ATATTTGAGATAGAAGGCCTGCATAATTTGCCTTCACTGAATATTCTCCTGTTGCACCACAATGAGCTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS GCA 72 bp TTCATAGTAGCATCGATGTTTGTGAGCTCATTGTGGTaGAACAGGAGAATATTCAGTGAAGGCAAATTATGC +
Preference number: 6 (lower is better)
Translates to: FIVASMFVSSLW*NRRIFSEGKLC
Trigger: GCATAATTTGCCTTCACTGAATATTCTCCTGTTGCACCACAATGAGCTCACAAACATCGATGCTACTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS CCA 72 bp TCCTTCATAGTAGCATCGATGTTTGTGAGCTCATTGTaGTGCAACAGGAGAATATTCAGTGAAGGCAAATTA +
Preference number: 6 (lower is better)
Translates to: SFIVASMFVSSL*CNRRIFSEGKL
Trigger: TAATTTGCCTTCACTGAATATTCTCCTGTTGCACCACAATGAGCTCACAAACATCGATGCTACTATGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2
CDS CAA 72 bp GTGAAGGCAAATTATGCAGGCCTTCTATCTCAAATATaGCATTGTTGTTCAGATACAGCTCGGTCAGACAAT +
Preference number: 6 (lower is better)
Translates to: VKANYAGLLSQI*HCCSDTARSDN
Trigger: ATTGTCTGACCGAGCTGTATCTGAACAACAATGCAATATTTGAGATAGAAGGCCTGCATAATTTGCCTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221155.2