Pregenerated sensors for LRRC71 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023084Ensembl transcript IDs: ENSMUST00000023846.11, ENSMUST00000174581.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGTGTGACCGGTCAAAAATGGGTAGAGGGAGACAAGAAAGCCCCTaGCACAGCCATCCTGCACCAGGTCTTTCCACCTGTCCCAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: RCDRSKMGRGRQESP*HSHPAPGLSTCPKV Trigger: CACTTTGGGACAGGTGGAAAGACCTGGTGCAGGATGGCTGTGGCAGGGGCTTTCTTGTCTCCCTCTACCCATTTTTGACCGGTCACACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 90 bp | AGCCTCCCCGTGAAAGATACTGTGAGGCCTGGGAATCCCTCATGTTaGCTGGTCTGTTCCCACCAGACAGTCCAGTTTAGTGTCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SLPVKDTVRPGNPSC*LVCSHQTVQFSVSS Trigger: GGAAGAGACACTAAACTGGACTGTCTGGTGGGAACAGACCAGGCAACATGAGGGATTCCCAGGCCTCACAGTATCTTTCACGGGGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 90 bp | CACCAGGTACGGATCTCAACACAGACTCTCAAGAGAGATGTGGAGTaGATTGCTGGAGTCCCTGAGTTAAGTCAGGGCCCTTCCTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: HQVRISTQTLKRDVE*IAGVPELSQGPSFP Trigger: GGGGAAGGAAGGGCCCTGACTTAACTCAGGGACTCCAGCAATCCACTCCACATCTCTCTTGAGAGTCTGTGTTGAGATCCGTACCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 90 bp | ATAGAAAGGCCTCCACCCCACATAGCCAGTGTGGGGTGTGCTATGTaGACAGTGCCCTTGAGGAGGCTTATGTATAAATGCACTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: IERPPPHIASVGCAM*TVPLRRLMYKCTFF Trigger: GAAGAAAGTGCATTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGCTATGTGGGGTGGAGGCCTTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 90 bp | GTTTGGCCTTTGTTATGCAAATTGGATACAGTACCCTCTCCAGAGTaGCCTCATCTTTTAAAGCAGAGCCCTGGCCTCTGGAAAACCAGA | + |
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Preference number: 1 (lower is better) Translates to: VWPLLCKLDTVPSPE*PHLLKQSPGLWKTR Trigger: TCTGGTTTTCCAGAGGCCAGGGCTCTGCTTTAAAAGATGAGGGCACTCTGGAGAGGGTACTGTATCCAATTTGCATAACAAAGGCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCTTCCTTCCCCAGGGGCCACAGCACCGTTGGCTCATCACCCTGTCCTCACTTCTCAGCAGAGGTTaGACAACTGGCTCTGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GPFLPQGPQHRWLITLSSLLSRG*TTGSGP Trigger: TGGGCCAGAGCCAGTTGTCCAACCTCTGCTGAGAAG...TGAGGACAGGGTGATGAGCCAACGGTGCTGTGGCCCCTGGGGAAGGAAGGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGTCCCTGAGTTAAGTCAGGGCCCTTCCTTCCCCAGGGGCCACAGCACCAATGGAACCATGGTGTaGTTCAGGCCAACATTCGGC | + |
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Preference number: 2 (lower is better) Translates to: AGVPELSQGPSFPRGHSTNGTMV*FRPTFG Trigger: GCCGAATGTTGGCCTGAATCACACCATGGTTCCATT...GGTGCTGTGGCCCCTGGGGAAGGAAGGGCCCTGACTTAACTCAGGGACTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR-3UTR GCA 90 bp | GAGATTCCCTGGAGGTTGGCATGGGCTCTCCAGAACCCTCAGCAGAGGCAGCCCATCATCCTAGTGCTGTaGATGCTGACAGAGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: EIPWRLAWALQNPQQRQPIILVL*MLTEMA Trigger: GGCCATCTCTGTCAGCATGCACAGCACTAGGATGAT...GGGCTGCCTCTGCTGAGGGTTCTGGAGAGCCCATGCCAACCTCCAGGGAATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CAA 90 bp | CTGGAAGGTAGAGGAGGGGCTAGAGATGAGGGAGAGTTACCTTGGTaGGAGATTCCCTGGAGGTTGGCATGGGCTCTCCAGAACCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LEGRGGARDEGELPW*EIPWRLAWALQNPQ Trigger: CTGAGGGTTCTGGAGAGCCCATGCCAACCTCCAGGGAATCTCCAACCAAGGTAACTCTCCCTCATCTCTAGCCCCTCCTCTACCTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CAA 90 bp | TCCACCTGTCCCAAAGTGCCGGTGTGTAGACCTTCTCAGCAGAGGTaGGACAACTGGCTCTGGCCCAGAAAAGGACATTGTGGTTACGTC | + |
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Preference number: 2 (lower is better) Translates to: STCPKVPVCRPSQQR*DNWLWPRKGHCGYV Trigger: GACGTAACCACAATGTCCTTTTCTGGGCCAGAGCCAGTTGTCCAACCTCTGCTGAGAAGGTCTACACACCGGCACTTTGGGACAGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR-3UTR CCA 90 bp | TTTATTCTGTCCCTGGCATGTTCAACCAGTCACAGAGAGCCAGGCAGCAGCCCCTTTAAAGCAGAGCCCTaGCCTCTGGAAAACCAGACA | + |
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Preference number: 2 (lower is better) Translates to: FILSLACSTSHREPGSSPFKAEP*PLENQT Trigger: TGTCTGGTTTTCCAGAGGCCAGGGCTCTGCTTTAAA...GGGGCTGCTGCCTGGCTCTCTGTGACTGGTTGAACATGCCAGGGACAGAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CAA 90 bp | CCACCCCACATAGCCAGTGTGGGGTGTGCTATGTGCACAGTGCCCTaGAGGAGGCTTATGTATAAATGCACTTTCTTCCTCCTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PPHIASVGCAMCTVP*RRLMYKCTFFLLFF Trigger: GAAGAAGAGGAGGAAGAAAGTGCATTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGCTATGTGGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR-3UTR GCA 90 bp | CACTCTATTACATATAAGCTTTGTCACAGCTGGCACTCAAGAATCAGCCAGGGAAGACAAGAAAGCCCCTaGCACAGCCATCCTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: HSITYKLCHSWHSRISQGRQESP*HSHPAP Trigger: TGGTGCAGGATGGCTGTGGCAGGGGCTTTCTTGTCT...TCCCTGGCTGATTCTTGAGTGCCAGCTGTGACAAAGCTTATATGTAATAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR-3UTR GCA 90 bp | GCCAGTGTGGGGTGTGCTATGTGCACAGTGCCCTTGAGGAGGCTTATGTATAAACCTGGCTCTCCTCTTTaGCCTTTAGTTTCCTATAAA | + |
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Preference number: 2 (lower is better) Translates to: ASVGCAMCTVPLRRLMYKPGSPL*PLVSYK Trigger: TTTATAGGAAACTAAAGGGCAAAGAGGAGAGCCAGG...TTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTTTGGCCTTTGTTATGCAAATTGGATACAGTACCCTCTCCAGAGTGCCCAGAGCCCTGGCCTCTaGAAAACCAGACAAACACAT | + |
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Preference number: 2 (lower is better) Translates to: LRFGLCYANWIQYPLQSAQSPGL*KTRQTH Trigger: ATGTGTTTGTCTGGTTTTCCAGAGGCCAGGGCTCTG...GGCACTCTGGAGAGGGTACTGTATCCAATTTGCATAACAAAGGCCAAACCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 72 bp | AGACTCAGAGCAGCCGGAGAGATCCCCAGAGCCACTTaGCAGCCGGGGCTGGAGCTCTGGAAGGTAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RLRAAGEIPRAT*QPGLELWKVEE Trigger: CTCCTCTACCTTCCAGAGCTCCAGCCCCGGCTGGCAAGTGGCTCTGGGGATCTCTCCGGCTGCTCTGAGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | TCAGGGCCCTTCCTTCCCCAGGGGCCACAGCACCGTTaGCTCATCACCCTGTCCTCACGCCACTCCCTACAA | + |
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Preference number: 3 (lower is better) Translates to: SGPFLPQGPQHR*LITLSSRHSLQ Trigger: TTGTAGGGAGTGGCGTGAGGACAGGGTGATGAGCCAACGGTGCTGTGGCCCCTGGGGAAGGAAGGGCCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | GAGTTACCTTGGTTGGAGATTCCCTGGAGGTTGGCATaGGCTCTCCAGAACCCTCAGCAGAGGCAGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: ELPWLEIPWRLA*ALQNPQQRQPC Trigger: GCAGGGCTGCCTCTGCTGAGGGTTCTGGAGAGCCCATGCCAACCTCCAGGGAATCTCCAACCAAGGTAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | AGGGAGAGTTACCTTGGTTGGAGATTCCCTGGAGGTTaGCATGGGCTCTCCAGAACCCTCAGCAGAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RESYLGWRFPGG*HGLSRTLSRGS Trigger: GCTGCCTCTGCTGAGGGTTCTGGAGAGCCCATGCCAACCTCCAGGGAATCTCCAACCAAGGTAACTCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR TCA 72 bp | AACCCTCAGCAGAGGCAGCCCTGCTCTGGATGTCCATaGTTTCTAGTTGCTGACCTGCCTGCCGTGTGTACG | + |
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Preference number: 3 (lower is better) Translates to: NPQQRQPCSGCP*FLVADLPAVCT Trigger: CGTACACACGGCAGGCAGGTCAGCAACTAGAAATCATGGACATCCAGAGCAGGGCTGCCTCTGCTGAGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR TCA 72 bp | TCTCAAGAGAGATGTGGAGTGGATTGCTGGAGTCCCTaGGTTAAGTCAGGGCCCTTCCTTCCCCAGGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SQERCGVDCWSP*VKSGPFLPQGP Trigger: TGGCCCCTGGGGAAGGAAGGGCCCTGACTTAACTCAGGGACTCCAGCAATCCACTCCACATCTCTCTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 72 bp | GCCATCCTGCACCAGGTCTTTCCACCTGTCCCAAAGTaGCGGTGTGTAGACCTTCTCAGCAGAGGTTGGACA | + |
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Preference number: 3 (lower is better) Translates to: AILHQVFPPVPK*RCVDLLSRGWT Trigger: TGTCCAACCTCTGCTGAGAAGGTCTACACACCGGCACTTTGGGACAGGTGGAAAGACCTGGTGCAGGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | GAGGAGGGGCTAGAGATGAGGGAGAGTTACCTTGGTTaGAGATTCCCTGGAGGTTGGCATGGGCTCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: EEGLEMRESYLG*RFPGGWHGLSR Trigger: TCTGGAGAGCCCATGCCAACCTCCAGGGAATCTCCAACCAAGGTAACTCTCCCTCATCTCTAGCCCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | GGTAGAGGAGGGGCTAGAGATGAGGGAGAGTTACCTTaGTTGGAGATTCCCTGGAGGTTGGCATGGGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GRGGARDEGELP*LEIPWRLAWAL Trigger: GAGAGCCCATGCCAACCTCCAGGGAATCTCCAACCAAGGTAACTCTCCCTCATCTCTAGCCCCTCCTCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 72 bp | AGAAAGGCCTCCACCCCACATAGCCAGTGTGGGGTGTaGTATGTGCACAGTGCCCTTGAGGAGGCTTATGTA | + |
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Preference number: 3 (lower is better) Translates to: RKASTPHSQCGV*YVHSALEEAYV Trigger: TACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGCTATGTGGGGTGGAGGCCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | AGAGATGAGGGAGAGTTACCTTGGTTGGAGATTCCCTaGAGGTTGGCATGGGCTCTCCAGAACCCTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: RDEGELPWLEIP*RLAWALQNPQQ Trigger: CTGCTGAGGGTTCTGGAGAGCCCATGCCAACCTCCAGGGAATCTCCAACCAAGGTAACTCTCCCTCATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 72 bp | CCTCCACCCCACATAGCCAGTGTGGGGTGTGCTATGTaGACAGTGCCCTTGAGGAGGCTTATGTATAAATGC | + |
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Preference number: 3 (lower is better) Translates to: PPPHIASVGCAM*TVPLRRLMYKC Trigger: GCATTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGCTATGTGGGGTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 72 bp | GTGAAAGATACTGTGAGGCCTGGGAATCCCTCATGTTaGCTGGTCTGTTCCCACCAGACAGTCCAGTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: VKDTVRPGNPSC*LVCSHQTVQFS Trigger: ACTAAACTGGACTGTCTGGTGGGAACAGACCAGGCAACATGAGGGATTCCCAGGCCTCACAGTATCTTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 72 bp | TTGTTATGCAAATTGGATACAGTACCCTCTCCAGAGTaGCCTCATCTTTTAAAGCAGAGCCCTGGCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LLCKLDTVPSPE*PHLLKQSPGLW Trigger: CCAGAGGCCAGGGCTCTGCTTTAAAAGATGAGGGCACTCTGGAGAGGGTACTGTATCCAATTTGCATAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR GCA 72 bp | CCGTGTGTACGTGTGTCTAAGGTTTGGCCTTTGTTATaGAAATTGGATACAGTACCCTCTCCAGAGTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PCVRVSKVWPLL*KLDTVPSPECP Trigger: AGGGCACTCTGGAGAGGGTACTGTATCCAATTTGCATAACAAAGGCCAAACCTTAGACACACGTACACACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | GAGTGCCCTCATCTTTTAAAGCAGAGCCCTGGCCTCTaGAAAACCAGACAAACACATGGAGATAGCATCAGA | + |
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Preference number: 3 (lower is better) Translates to: ECPHLLKQSPGL*KTRQTHGDSIR Trigger: TCTGATGCTATCTCCATGTGTTTGTCTGGTTTTCCAGAGGCCAGGGCTCTGCTTTAAAAGATGAGGGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | CTGACCTGCCTGCCGTGTGTACGTGTGTCTAAGGTTTaGCCTTTGTTATGCAAATTGGATACAGTACCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LTCLPCVRVSKV*PLLCKLDTVPS Trigger: AGAGGGTACTGTATCCAATTTGCATAACAAAGGCCAAACCTTAGACACACGTACACACGGCAGGCAGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CCA 72 bp | TCCACACACTCTATTACATATAAGCTTTGTCACAGCTaGCACTCAAGAATCAGCCAGGGACATGAAAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: STHSITYKLCHS*HSRISQGHERE Trigger: TTCTCTTTCATGTCCCTGGCTGATTCTTGAGTGCCAGCTGTGACAAAGCTTATATGTAATAGAGTGTGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| 3UTR CAA 72 bp | GAGACTCAGAGCAGCCGGAGAGATCCCCAGAGCCACTaGCCAGCCGGGGCTGGAGCTCTGGAAGGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ETQSSRRDPQSH*PAGAGALEGRG Trigger: TCCTCTACCTTCCAGAGCTCCAGCCCCGGCTGGCAAGTGGCTCTGGGGATCTCTCCGGCTGCTCTGAGTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR CCA 90 bp | GCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGAGTGTGGACAGCGCCTaGCCCAGGAGCTGCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: AQQETMLLVQATSQGDRLSVDSA*PRSCAP Trigger: CGGGGCGCAGCTCCTGGGCCAGGCGCTGTCCACACT...CAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR GCA 90 bp | GGGCCCTTCCTTCCCCAGGGGCCACAGCACCGTTGGCTCATCACCCTGTCCTCACGGAGGAGGTTGAGGTaGAAAAGGACCTTGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GPFLPQGPQHRWLITLSSRRRLR*KRTLFP Trigger: TGGGAACAAGGTCCTTTTGCACCTCAACCTCCTCCG...TGAGGACAGGGTGATGAGCCAACGGTGCTGTGGCCCCTGGGGAAGGAAGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTCCCTGAGTTAAGTCAGGGCCCTTCCTTCCCCAGGGGCCACAGCACCCCAGAGATACCTTCCTaGGTGTGGAGGAACAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: AGVPELSQGPSFPRGHSTPEIPS*VWRNKE Trigger: CTCTTTGTTCCTCCACACTCAGGAAGGTATCTCTGG...GGTGCTGTGGCCCCTGGGGAAGGAAGGGCCCTGACTTAACTCAGGGACTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR TCA 90 bp | GAGATTCCCTGGAGGTTGGCATGGGCTCTCCAGAACCCTCAGCAGAGGCAGCCCGGTTTCGGAGGAGGTTaGGGTGCAAAAGGACCTTGT | + |
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Preference number: 4 (lower is better) Translates to: EIPWRLAWALQNPQQRQPGFGGG*GAKGPC Trigger: ACAAGGTCCTTTTGCACCTCAACCTCCTCCGAAACC...GGGCTGCCTCTGCTGAGGGTTCTGGAGAGCCCATGCCAACCTCCAGGGAATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR GCA 90 bp | GAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGACCAGGCTGCTCTGGCTaGAGGATGCCGACGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ETMLLVQATSQGDRLPVGPGCSG*RMPTVS Trigger: AGAGACCGTCGGCATCCTGCAGCCAGAGCAGCCTGG...TCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR TCA 90 bp | GACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGAGGTTCCTTGTGTGGGTaGCTGCCCAGAGCCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: DYVTGPSYLPGRQAACRRGSLCG*LPRAQL Trigger: AAGCTGGGCTCTGGGCAGTCACCCACACAAGGAACC...TCTCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR TCA 90 bp | GGCCTTCTCAGTGTCAGGAAATGCTCCTGCAGGGAGTGTCTTACCCAGCCCTTCGGTATTGCACAGCAGTaGGGAAGCCTTCCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GLLSVRKCSCRECLTQPFGIAQQ*GSLPAP Trigger: TGGGGCTGGAAGGCTTCCTCACTGCTGTGCAATACC...GAAGGGCTGGGTAAGACACTCCCTGCAGGAGCATTTCCTGACACTGAGAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR CCA 90 bp | CAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTACCTCCTCCCTGGCCTTaGCCTTCACAGGGTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QETMLLVQATSQGDRLPVPPPWP*PSQGPL Trigger: CAAGGGACCCTGTGAAGGCCAAGGCCAGGGAGGAGG...TACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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| 3UTR CAA 72 bp | GAGGGAGAGTTACCTTGGTTGGAGATTCCCTGGAGGTaGGCATGGGCTCTCCAGAACCCTCAGCAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EGELPWLEIPWR*AWALQNPQQRQ Trigger: CTGCCTCTGCTGAGGGTTCTGGAGAGCCCATGCCAACCTCCAGGGAATCTCCAACCAAGGTAACTCTCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR TCA 90 bp | AGGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGAGGTTACTGCTCCGGATaGCTTCTGGGCCCCAGGACG | + |
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Preference number: 4 (lower is better) Translates to: RNSTARDYVTGPSYLPGRGYCSG*LLGPRT Trigger: CGTCCTGGGGCCCAGAAGTCATCCGGAGCAGTAACC...TCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR TCA 90 bp | GCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTGGTATTGCACAGCAGTaGGGAAGCCTTCCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ARDYVTGPSYLPGRQAACGIAQQ*GSLPAP Trigger: TGGGGCTGGAAGGCTTCCTCACTGCTGTGCAATACC...ACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGCTGACTCCAGGAGGATaGTGCGCTTCTCTTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SKRLCYWSKLPPRETGCLLTPGG*CASLWP Trigger: GGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAG...CAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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| CDS-3UTR TCA 90 bp | GGCCTTCTCAGTGTCAGGAAATGCTCCTGCAGGGAGTGTCTTACCCAGCCCTTCAGTGCTCCCTTGTCTTaGATGTGGTTGTGCGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: GLLSVRKCSCRECLTQPFSAPLS*MWLCAR Trigger: CCTAGCGCACAACCACATTCAAGACAAGGGAGCACT...GAAGGGCTGGGTAAGACACTCCCTGCAGGAGCATTTCCTGACACTGAGAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR TCA 90 bp | ACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGACAACAACCAGCTGTTCTaGCTCCAGGAGGATGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: TMLLVQATSQGDRLPVGDNNQLF*LQEDAA Trigger: CGCAGCATCCTCCTGGAGTCAGAACAGCTGGTTGTT...GTCTCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS-3UTR TCA 90 bp | AACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGTGTCCCAGGTGTTCTaGCTCCAGGAGGATGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSTARDYVTGPSYLPGRQVSQVF*LQEDAA Trigger: CGCAGCATCCTCCTGGAGTCAGAACACCTGGGACAC...CTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174581.2 |
||
| CDS-3UTR GCA 90 bp | AGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGCGGGGGCAGGGTGCTTaGTGTCTTATCTTTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDYVTGPSYLPGRQAACRRGQGA*CLIFSS Trigger: GCTGCTAAAGATAAGACAGCAAGCACCCTGCCCCCG...CCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | AGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTCGTAGCCTGACCGTGTaGAGAGCTCAGCGAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STARDYVTGPSYLPGRQARSLTV*RAQRSL Trigger: CAGACTTCGCTGAGCTCTGCACACGGTCAGGCTACG...AGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | CTAAGGTTTGGCCTTTGTTATGCAAATTGGATACAGTACCCTCTCCAGAGTGCCGCCTGGCCCAGGAGCTaGGCCCCGTGGTCGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRFGLCYANWIQYPLQSAAWPRS*APWSLM Trigger: CATCAACGACCACGGGGCGCAGCTCCTGGGCCAGGC...GGCACTCTGGAGAGGGTACTGTATCCAATTTGCATAACAAAGGCCAAACCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | CCCCCAATGGAACCATGGTGTGATTCAGGCCAACATTCGGCCCTGTCTAGCCAGGGACTGCTCTGGTATTaGGTTCCCCTCCAGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PPMEPWCDSGQHSALSSQGLLWY*VPLQRY Trigger: GTATCTCTGGAGGGGAACCCAATACCAGAGCAGTCC...CTGGCTAGACAGGGCCGAATGTTGGCCTGAATCACACCATGGTTCCATTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGTGGGGTGTGCTATGTGCACAGTGCCCTTGAGGAGGCTTATGTATAAATGCTGTTCTGCAGTGTaGACAGCGCCTGGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASVGCAMCTVPLRRLMYKCCSAV*TAPGPG Trigger: TCCTGGGCCAGGCGCTGTCCACACTGCAGAACAGCA...TTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR TCA 90 bp | GAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGGTTTCGGAGGAGGTTaGGGTGCAAAAGGACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETMLLVQATSQGDRLPVGGFGGG*GAKGPC Trigger: ACAAGGTCCTTTTGCACCTCAACCTCCTCCGAAACC...TCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR TCA 90 bp | GACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGATTGGGCTTGGAGACCTaGACCTGGTATTGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DYVTGPSYLPGRQAACRRLGLET*TWYCTA Trigger: TGCTGTGCAATACCAGGTTCAGGTCTCCAAGCCCAA...TCTCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGTGGGGTGTGCTATGTGCACAGTGCCCTTGAGGAGGCTTATGTATAAATCTCCTTCACGGCCTTaGTGTCCTCCTGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASVGCAMCTVPLRRLMYKSPSRP*CPPAPA Trigger: AGCTGGAGCAGGAGGACAGCAAGGCCGTGAAGGAGA...TTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTCCCCTTGCCTGCCTTTaGGGCATCTTCTTTCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQETMLLVQATSQGDRLPPLACL*GIFFLR Trigger: CCTAAGAAAGAAGATGCCGCAAAGGCAGGCAAGGGG...AGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | AAGGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGCTGACTCCAGGAGGATaGTGCGCTTCTCTTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEQHSKRLCYWSKLPPRELTPGG*CASLWP Trigger: GGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAG...CTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR GCA 90 bp | ACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGACCGGAGGAGGTTGAGGTaGAAAAGGACCTTGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMLLVQATSQGDRLPVGDRRRLR*KRTLFP Trigger: TGGGAACAAGGTCCTTTTGCACCTCAACCTCCTCCG...GTCTCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CCA 90 bp | ATAACTGGAAAAGCCATGGTGCACCTTAACACAGTGACTGAGACTCAGAGCAGCCTCTCCAGGCTGCTCTaGCTGCAGGATGCCGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGKAMVHLNTVTETQSSLSRLL*LQDADG Trigger: ACCGTCGGCATCCTGCAGCCAGAGCAGCCTGGAGAG...GCTGCTCTGAGTCTCAGTCACTGTGTTAAGGTGCACCATGGCTTTTCCAGTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTCTGTCCCTGGCATGTTCAACCAGTCACAGAGAGCCAGGCAGCAGCCCCTGCTGCGCTTCTCTTTaGCCCCCATCTTTGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FILSLACSTSHREPGSSPCCASL*PPSLSL Trigger: AAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCA...GGGGCTGCTGCCTGGCTCTCTGTGACTGGTTGAACATGCCAGGGACAGAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | GACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGACCCACCTCTGTGATTTaGTTTCGGAGGAGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DYVTGPSYLPGRQAACRRPTSVI*FRRRLR Trigger: CCTCAACCTCCTCCGAAACCAAATCACAGAGGTGGG...TCTCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| 3UTR CAA 72 bp | CCCAAAGTGCCGGTGTGTAGACCTTCTCAGCAGAGGTaGGACAACTGGCTCTGGCCCAGAAAAGGACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKVPVCRPSQQR*DNWLWPRKGHC Trigger: ACAATGTCCTTTTCTGGGCCAGAGCCAGTTGTCCAACCTCTGCTGAGAAGGTCTACACACCGGCACTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | GAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAAGACTTCTCACGTTCTaGTTTGGAGTCCCCGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: ETMLLVQATSQGDRLPVGRLLTF*FGVPVS Trigger: CGATACGGGGACTCCAAAGCAGAACGTGAGAAGTCT...TCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTTACCTTCCCCTTGCCTaGCTTTGCGGCATCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARDYVTGPSYLPGRQAACYLPLA*LCGIFF Trigger: AAAGAAGATGCCGCAAAGGCAGGCAAGGGGAAGGTA...ACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGATGCCGACGGTCTCTaGTCATCTAGGACAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQETMLLVQATSQGDRLPDADGL*SSRTGF Trigger: AAAACCTGTCCTAGATGACCAGAGACCGTCGGCATC...AGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | GGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAAACCAGGGTTCGGTTaGTGTTCTGCAGTGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GTAQQETMLLVQATSQGDKPGFG*CSAVWT Trigger: TGTCCACACTGCAGAACAGCAACCGAACCCTGGTTT...GTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | ACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGACTAAAGGACTGCTCTaGTATTGGGTTCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAQQETMLLVQATSQGDRTKGLL*YWVPLQ Trigger: CTGGAGGGGAACCCAATACCAGAGCAGTCCTTTAGT...CCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGTGGGGTGTGCTATGTGCACAGTGCCCTTGAGGAGGCTTATGTATAAATCTTCTGCTCAGGGATaGTTACCTTCCCCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASVGCAMCTVPLRRLMYKSSAQG*LPSPCL Trigger: CAGGCAAGGGGAAGGTAACCATCCCTGAGCAGAAGA...TTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | AGGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGATGCTGCGCTTCTCTTTaGCCCCCATCTTTGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNSTARDYVTGPSYLPGRCCASL*PPSLSL Trigger: AAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCA...TCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGGTGTGTTGGACACTGTaGGTCAAAGCAGTTTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AQQETMLLVQATSQGDRLVCWTL*VKAVFR Trigger: GCGAAAAACTGCTTTGACCCACAGTGTCCAACACAC...CAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTCAGTTCTTGAATCATaGCGTGTGTTGGACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHSKRLCYWSKLPPRETGSVLES*RVLDTV Trigger: CACAGTGTCCAACACACGTCATGATTCAAGAACTGA...GCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGGCAACATCAGTTCTTaGATCATGACGTGTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQETMLLVQATSQGDRLPGNISS*IMTCVG Trigger: TCCAACACACGTCATGATTCAAGAACTGATGTTGCC...AGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR GCA 90 bp | CACTCTATTACATATAAGCTTTGTCACAGCTGGCACTCAAGAATCAGCCAGGGACACAAGTTGATGGCCTaGAGCTGGCTGAGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSITYKLCHSWHSRISQGHKLMA*SWLREG Trigger: GCCCTCCCTCAGCCAGCTGCAGGCCATCAACTTGTG...TCCCTGGCTGATTCTTGAGTGCCAGCTGTGACAAAGCTTATATGTAATAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGTGGGGTGTGCTATGTGCACAGTGCCCTTGAGGAGGCTTATGTATAAACCCTTGCTCATCTTCTaGTCAGGGATGGTTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVGCAMCTVPLRRLMYKPLLIF*SGMVTF Trigger: GAAGGTAACCATCCCTGAGCAGAAGATGAGCAAGGG...TTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGTTGTCGCTTTTCCCTTaGTCATCTTCTGCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAQQETMLLVQATSQGDRLSLFP*SSSAQG Trigger: TCCCTGAGCAGAAGATGAGCAAGGGAAAAGCGACAA...CCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | GAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAAATCATGACGTGTGTTaGACACTGTGGGTCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETMLLVQATSQGDRLPVGNHDVC*TLWVKA Trigger: TGCTTTGACCCACAGTGTCCAACACACGTCATGATT...TCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CCA 90 bp | ACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGACCTTCACAGGGTCCCTTaGCAACATCAGTTCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TMLLVQATSQGDRLPVGDLHRVP*QHQFLN Trigger: ATTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAG...GTCTCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR TCA 90 bp | GGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACCTTAGGGGCTTTCAGTaGCTGCATCTTTTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTAQQETMLLVQATSQGDLRGFQ*LHLFLL Trigger: AAGCAAGAAAAGATGCAGTCACTGAAAGCCCCTAAG...GTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR TCA 90 bp | AGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGGCAACATCAGTTCTTaGATCATGACGTGTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: STARDYVTGPSYLPGRQAGNISS*IMTCVG Trigger: TCCAACACACGTCATGATTCAAGAACTGATGTTGCC...AGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CCA 90 bp | AGGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGAGGGAGGGCAGACATTTaGAGAAAATACCCAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RNSTARDYVTGPSYLPGRGRADI*RKYPES Trigger: GGATTCTGGGTATTTTCTCCAAATGTCTGCCCTCCC...TCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CCA 90 bp | AACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGTGTGTTGGACACTGTaGGTCAAAGCAGTTTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NSTARDYVTGPSYLPGRQVCWTL*VKAVFR Trigger: GCGAAAAACTGCTTTGACCCACAGTGTCCAACACAC...CTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR TCA 90 bp | GAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACATCAGTTCTTGAATCATaGCGTGTGTTGGACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQHSKRLCYWSKLPPRETSVLES*RVLDTV Trigger: CACAGTGTCCAACACACGTCATGATTCAAGAACTGA...TGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGCTTCACAGGGTCCCTTaGCAACATCAGTTCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSTARDYVTGPSYLPGRQLHRVP*QHQFLN Trigger: ATTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAG...CTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| 3UTR CAA 72 bp | TGCCTGCCGTGTGTACGTGTGTCTAAGGTTTGGCCTTaGTTATGCAAATTGGATACAGTACCCTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLPCVRVSKVWP*LCKLDTVPSPE Trigger: CTCTGGAGAGGGTACTGTATCCAATTTGCATAACAAAGGCCAAACCTTAGACACACGTACACACGGCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| 3UTR CAA 72 bp | ATAGCCAGTGTGGGGTGTGCTATGTGCACAGTGCCCTaGAGGAGGCTTATGTATAAATGCACTTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IASVGCAMCTVP*RRLMYKCTFFL Trigger: GAGGAAGAAAGTGCATTTATACATAAGCCTCCTCAAGGGCACTGTGCACATAGCACACCCCACACTGGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR TCA 90 bp | CACTCTATTACATATAAGCTTTGTCACAGCTGGCACTCAAGAATCAGCCAGGGATTGGGCTTGGAGACCTaGACCTGGTATTGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSITYKLCHSWHSRISQGLGLET*TWYCTA Trigger: TGCTGTGCAATACCAGGTTCAGGTCTCCAAGCCCAA...TCCCTGGCTGATTCTTGAGTGCCAGCTGTGACAAAGCTTATATGTAATAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS CCA 90 bp | GTTCCTTTCACCAGCAGCAGGCGCCGCCGCTCCACCACCTCCCTGTaGGTCAGCTCAAAGGGGCGCAGGACCTCGGCCAGCTTCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPFTSSRRRRSTTSL*VSSKGRRTSASFSA Trigger: AGCACTGAAGCTGGCCGAGGTCCTGCGCCCCTTTGAGCTGACCCACAGGGAGGTGGTGGAGCGGCGGCGCCTGCTGCTGGTGAAAGGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTTCCTTCCCCAGGGGCCACAGCACCGTTGGCTCATCACCCTGTCCTCAATCTCCTTCACGGCCTaGCTGTCCTCCTGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPFLPQGPQHRWLITLSSISFTA*LSSCSS Trigger: GCTGGAGCAGGAGGACAGCAAGGCCGTGAAGGAGAT...TGAGGACAGGGTGATGAGCCAACGGTGCTGTGGCCCCTGGGGAAGGAAGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS TCA 90 bp | TTGGACCCGTGGCCGGGTGACAACTTTGGGAAAGTCCACGTAGCCTaGCCGTGTGCAGAGCTCAGCGAAGTCTGTCTCCAGGACCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LDPWPGDNFGKVHVA*PCAELSEVCLQDPR Trigger: ACGGGGGTCCTGGAGACAGACTTCGCTGAGCTCTGCACACGGTCAGGCTACGTGGACTTTCCCAAAGTTGTCACCCGGCCACGGGTCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS GCA 90 bp | TGGTTGAATGCTAGGTTCAGTGAAACCAGGGTTCGGTTGCTGTTCTaGAGTGTGGACAGCGCCTGGCCCAGGAGCTGCGCCCCGTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WLNARFSETRVRLLF*SVDSAWPRSCAPWS Trigger: CGACCACGGGGCGCAGCTCCTGGGCCAGGCGCTGTCCACACTGCAGAACAGCAACCGAACCCTGGTTTCACTGAACCTAGCATTCAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGTCCCTGAGTTAAGTCAGGGCCCTTCCTTCCCCAGGGGCCACAGCACCTTCTCACGTTCTGCTTaGGAGTCCCCGTATCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGVPELSQGPSFPRGHSTFSRSA*ESPYRE Trigger: CTCCCGATACGGGGACTCCAAAGCAGAACGTGAGAA...GGTGCTGTGGCCCCTGGGGAAGGAAGGGCCCTGACTTAACTCAGGGACTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS CCA 90 bp | AGTGAAACCAGGGTTCGGTTGCTGTTCTGCAGTGTGGACAGCGCCTaGCCCAGGAGCTGCGCCCCGTGGTCGTTGATGTTGTTGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SETRVRLLFCSVDSA*PRSCAPWSLMLLFL Trigger: GAGGAACAACAACATCAACGACCACGGGGCGCAGCTCCTGGGCCAGGCGCTGTCCACACTGCAGAACAGCAACCGAACCCTGGTTTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS TCA 90 bp | GCAGTGTGGACAGCGCCTGGCCCAGGAGCTGCGCCCCGTGGTCGTTaGTGTTGTTGTTCCTCAGAGACAAGTGAACAATCGTGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVWTAPGPGAAPRGR*CCCSSETSEQSCCP Trigger: TGGACAGCACGATTGTTCACTTGTCTCTGAGGAACAACAACATCAACGACCACGGGGCGCAGCTCCTGGGCCAGGCGCTGTCCACACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | ACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTCCTCCTCCCTGGCCTaGGCCTTCACAGGGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TARDYVTGPSYLPGRQAASSSLA*AFTGSL Trigger: AAGGGACCCTGTGAAGGCCAAGGCCAGGGAGGAGGA...GGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGTCCTCCTCCCTGGCCTaGGCCTTCACAGGGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AQQETMLLVQATSQGDRLSSSLA*AFTGSL Trigger: AAGGGACCCTGTGAAGGCCAAGGCCAGGGAGGAGGA...CAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS CCA 90 bp | TACTTGCTCTCCAGGCTGCTCTGGCTGCAGGATGCCGACGGTCTCTaGTCATCTAGGACAGGTTTTTCTGACGTGGAGGCGGAAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: YLLSRLLWLQDADGL*SSRTGFSDVEAEGT Trigger: TGTCCCTTCCGCCTCCACGTCAGAAAAACCTGTCCTAGATGACCAGAGACCGTCGGCATCCTGCAGCCAGAGCAGCCTGGAGAGCAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGTCCCTGAGTTAAGTCAGGGCCCTTCCTTCCCCAGGGGCCACAGCACCTGGCAACATCAGTTCTaGAATCATGACGTGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGVPELSQGPSFPRGHSTWQHQF*NHDVCW Trigger: CCAACACACGTCATGATTCAAGAACTGATGTTGCCA...GGTGCTGTGGCCCCTGGGGAAGGAAGGGCCCTGACTTAACTCAGGGACTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS GCA 90 bp | CAAAGTGACATTGCTGATCCCCAACGTCTGAGACTTCTCACGTTCTaGTTTGGAGTCCCCGTATCGGGAGGAGGAAGGCGATCGAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: QSDIADPQRLRLLTF*FGVPVSGGGRRSRP Trigger: CGGTCTCGATCGCCTTCCTCCTCCCGATACGGGGACTCCAAAGCAGAACGTGAGAAGTCTCAGACGTTGGGGATCAGCAATGTCACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | ATAACTGGAAAAGCCATGGTGCACCTTAACACAGTGACTGAGACTCAGAGCAGCAGGGACAGAGCTCTGTaGGACCCGTGGCCGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ITGKAMVHLNTVTETQSSRDRAL*DPWPGD Trigger: GTCACCCGGCCACGGGTCCAACAGAGCTCTGTCCCT...GCTGCTCTGAGTCTCAGTCACTGTGTTAAGGTGCACCATGGCTTTTCCAGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS TCA 90 bp | TCAAGCCATCCGCAATGTAGCCTGCGCCCACATCCCCGATGTGGTTaGATGCTAGGTTCAGTGAAACCAGGGTTCGGTTGCTGTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSHPQCSLRPHPRCG*MLGSVKPGFGCCSA Trigger: TGCAGAACAGCAACCGAACCCTGGTTTCACTGAACCTAGCATTCAACCACATCGGGGATGTGGGCGCAGGCTACATTGCGGATGGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS GCA 90 bp | GCCTTTGCGGCATCTTCTTTCTTAGGGGTTCCTTGTGTGGGTGACTaGCCAGAGCCCAGCTTCTCTTCCTTCTTGACAACTTCCCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFAASSFLGVPCVGD*PEPSFSSFLTTSPV Trigger: GACAGGGGAAGTTGTCAAGAAGGAAGAGAAGCTGGGCTCTGGGCAGTCACCCACACAAGGAACCCCTAAGAAAGAAGATGCCGCAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGTGTCAGGAAATGCTCCTGCAGGGAGTGTCTTACCCAGCCCTTCCCCAAGGACTGCTCTGGTATaGGGTTCCCCTCCAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: FSVSGNAPAGSVLPSPSPRTALV*GSPPEI Trigger: TATCTCTGGAGGGGAACCCAATACCAGAGCAGTCCT...TGGGGAAGGGCTGGGTAAGACACTCCCTGCAGGAGCATTTCCTGACACTGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | ACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGATGGTTACCTTCCCCTaGCCTGCCTTTGCGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TAQQETMLLVQATSQGDRMVTFP*PAFAAS Trigger: AGATGCCGCAAAGGCAGGCAAGGGGAAGGTAACCAT...CCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | GACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGATGGTTTCGGAGGAGGTaGAGGTGCAAAAGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DYVTGPSYLPGRQAACRRWFRRR*RCKRTL Trigger: CAAGGTCCTTTTGCACCTCAACCTCCTCCGAAACCA...TCTCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | ACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGACTGGTTTCGGAGGAGGTaGAGGTGCAAAAGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TMLLVQATSQGDRLPVGDWFRRR*RCKRTL Trigger: CAAGGTCCTTTTGCACCTCAACCTCCTCCGAAACCA...GTCTCCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS GCA 90 bp | GGTTATAATTCAGGCTGTGTCCCAGGTGTTCTGACTCCAGGAGGATaGTGCGCTTCTCTTTGGCCCCCATCTTTGTCGCTTTTCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GYNSGCVPGVLTPGG*CASLWPPSLSLFPC Trigger: GCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACACCTGGGACACAGCCTGAATTATAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTCCGTGGTCGTTGATGTaGTTGTTCCTCAGAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARDYVTGPSYLPGRQAACPWSLM*LFLRDK Trigger: CTTGTCTCTGAGGAACAACAACATCAACGACCACGG...ACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | GCTCATCACCCTGTCCTCACGCCACTCCCTACAATGAACATACACACTGTGCTAGAAACCAGGGTTCGGTaGCTGTTCTGCAGTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AHHPVLTPLPTMNIHTVLETRVR*LFCSVD Trigger: GTCCACACTGCAGAACAGCAACCGAACCCTGGTTTC...TAGCACAGTGTGTATGTTCATTGTAGGGAGTGGCGTGAGGACAGGGTGATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | CCCCCAATGGAACCATGGTGTGATTCAGGCCAACATTCGGCCCTGTCTAGCCAGAGCTTCTCTTCCTTCTaGACAACTTCCCCTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPMEPWCDSGQHSALSSQSFSSF*TTSPVF Trigger: GAAGACAGGGGAAGTTGTCAAGAAGGAAGAGAAGCT...CTGGCTAGACAGGGCCGAATGTTGGCCTGAATCACACCATGGTTCCATTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | GGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGTGCAAAAGGACCTaGTTCCCAGGCAAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: GTAQQETMLLVQATSQGDRCKRT*FPGKKT Trigger: GGTCTTCTTGCCTGGGAACAAGGTCCTTTTGCACCT...GTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGAGGTGCAAAAGGACCTaGTTCCCAGGCAAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TAQQETMLLVQATSQGDRRCKRT*FPGKKT Trigger: GGTCTTCTTGCCTGGGAACAAGGTCCTTTTGCACCT...CCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGACCTGAACCTGGTATaGCACAGCAGTGAGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSTARDYVTGPSYLPGRQDLNLV*HSSEEA Trigger: GGCTTCCTCACTGCTGTGCAATACCAGGTTCAGGTC...CTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGGACCTGAACCTGGTATaGCACAGCAGTGAGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KEQHSKRLCYWSKLPPREDLNLV*HSSEEA Trigger: GGCTTCCTCACTGCTGTGCAATACCAGGTTCAGGTC...CTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCCCTTCACAGGGTCCCTaGGCAACATCAGTTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TARDYVTGPSYLPGRQAAPSQGP*ATSVLE Trigger: TTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAGG...GGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS TCA 90 bp | AGCTGCGCCCCGTGGTCGTTGATGTTGTTGTTCCTCAGAGACAAGTaGACAATCGTGCTGTCCAGTCCCATCAGCTTACTAAAGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCAPWSLMLLFLRDK*TIVLSSPISLLKDC Trigger: GCAGTCCTTTAGTAAGCTGATGGGACTGGACAGCACGATTGTTCACTTGTCTCTGAGGAACAACAACATCAACGACCACGGGGCGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS GCA 90 bp | TATAATTCAGGCTGTGTCCCAGGTGTTCTGACTCCAGGAGGATGCTaGGCTTCTCTTTGGCCCCCATCTTTGTCGCTTTTCCCTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YNSGCVPGVLTPGGC*ASLWPPSLSLFPCS Trigger: TGAGCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACACCTGGGACACAGCCTGAATTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174581.2 |
||
| CDS CCA 90 bp | CGTGCTGTCCAGTCCCATCAGCTTACTAAAGGACTGCTCTGGTATTaGGTTCCCCTCCAGAGATACCTTCCTGAGTGTGGAGGAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RAVQSHQLTKGLLWY*VPLQRYLPECGGTK Trigger: CTTTGTTCCTCCACACTCAGGAAGGTATCTCTGGAGGGGAACCCAATACCAGAGCAGTCCTTTAGTAAGCTGATGGGACTGGACAGCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | AGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGGAGGGAGGGCAGACATTaGGAGAAAATACCCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: RDYVTGPSYLPGRQAACRREGRH*EKIPRI Trigger: GATTCTGGGTATTTTCTCCAAATGTCTGCCCTCCCT...CCTACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | AGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTTTTGTCGCTTTTCCCTaGCTCATCTTCTGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: STARDYVTGPSYLPGRQAFVAFP*LIFCSG Trigger: CCCTGAGCAGAAGATGAGCAAGGGAAAAGCGACAAA...AGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS TCA 90 bp | CCTTGGCCTTCACAGGGTCCCTTGGCAACATCAGTTCTTGAATCATaGCGTGTGTTGGACACTGTGGGTCAAAGCAGTTTTTCGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWPSQGPLATSVLES*RVLDTVGQSSFSPR Trigger: CCTTGGCGAAAAACTGCTTTGACCCACAGTGTCCAACACACGTCATGATTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAGGCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS TCA 90 bp | TCCCTGGCCTTGGCCTTCACAGGGTCCCTTGGCAACATCAGTTCTTaGATCATGACGTGTGTTGGACACTGTGGGTCAAAGCAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLALAFTGSLGNISS*IMTCVGHCGSKQFF Trigger: GAAAAACTGCTTTGACCCACAGTGTCCAACACACGTCATGATTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAGGCCAAGGCCAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS CCA 90 bp | AACAATCGTGCTGTCCAGTCCCATCAGCTTACTAAAGGACTGCTCTaGTATTGGGTTCCCCTCCAGAGATACCTTCCTGAGTGTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NNRAVQSHQLTKGLL*YWVPLQRYLPECGG Trigger: TCCTCCACACTCAGGAAGGTATCTCTGGAGGGGAACCCAATACCAGAGCAGTCCTTTAGTAAGCTGATGGGACTGGACAGCACGATTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS CCA 90 bp | CCTTGGCAACATCAGTTCTTGAATCATGACGTGTGTTGGACACTGTaGGTCAAAGCAGTTTTTCGCCAAGGACAGCCACAGCAGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PWQHQFLNHDVCWTL*VKAVFRQGQPQQTQ Trigger: CTGGGTCTGCTGTGGCTGTCCTTGGCGAAAAACTGCTTTGACCCACAGTGTCCAACACACGTCATGATTCAAGAACTGATGTTGCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGTGGCAACATCAGTTCTaGAATCATGACGTGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQQETMLLVQATSQGDRLWQHQF*NHDVCW Trigger: CCAACACACGTCATGATTCAAGAACTGATGTTGCCA...CAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGCCTTCACAGGGTCCCTaGGCAACATCAGTTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KEQHSKRLCYWSKLPPREPSQGP*ATSVLE Trigger: TTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAGG...CTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGACAGGCTGCCTGTAGTCTTCTCCTTTTTCTaGCTTATGGTCTTAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QETMLLVQATSQGDRLPVVFSFF*LMVLGA Trigger: AGCCCCTAAGACCATAAGCAAGAAAAAGGAGAAGAC...TACAGGCAGCCTGTCTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS-3UTR CAA 90 bp | AAGGAACAGCACAGCAAGAGACTATGTTACTGGTCCAAGCTACCTCCCAGGGAGTGCATCTTTTCTTGCTaGTCCACCAAAGTGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: KEQHSKRLCYWSKLPPRECIFSC*STKVTL Trigger: CAATGTCACTTTGGTGGACAAGCAAGAAAAGATGCA...CTCCCTGGGAGGTAGCTTGGACCAGTAACATAGTCTCTTGCTGTGCTGTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS CCA 72 bp | ACCAGCAGCAGGCGCCGCCGCTCCACCACCTCCCTGTaGGTCAGCTCAAAGGGGCGCAGGACCTCGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSRRRRSTTSL*VSSKGRRTSAS Trigger: GCTGGCCGAGGTCCTGCGCCCCTTTGAGCTGACCCACAGGGAGGTGGTGGAGCGGCGGCGCCTGCTGCTGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS CCA 72 bp | TCAGTGAAACCAGGGTTCGGTTGCTGTTCTGCAGTGTaGACAGCGCCTGGCCCAGGAGCTGCGCCCCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SVKPGFGCCSAV*TAPGPGAAPRG Trigger: ACCACGGGGCGCAGCTCCTGGGCCAGGCGCTGTCCACACTGCAGAACAGCAACCGAACCCTGGTTTCACTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS GCA 72 bp | GCTAGGTTCAGTGAAACCAGGGTTCGGTTGCTGTTCTaGAGTGTGGACAGCGCCTGGCCCAGGAGCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARFSETRVRLLF*SVDSAWPRSCA Trigger: GGCGCAGCTCCTGGGCCAGGCGCTGTCCACACTGCAGAACAGCAACCGAACCCTGGTTTCACTGAACCTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS CCA 72 bp | CGTGGAGGCGGAAGGGACAGAGCTCTGTTGGACCCGTaGCCGGGTGACAACTTTGGGAAAGTCCACGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGGGRDRALLDP*PGDNFGKVHVA Trigger: GGCTACGTGGACTTTCCCAAAGTTGTCACCCGGCCACGGGTCCAACAGAGCTCTGTCCCTTCCGCCTCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS GCA 72 bp | CTGTTCTGCAGTGTGGACAGCGCCTGGCCCAGGAGCTaGGCCCCGTGGTCGTTGATGTTGTTGTTCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LFCSVDSAWPRS*APWSLMLLFLR Trigger: TCTGAGGAACAACAACATCAACGACCACGGGGCGCAGCTCCTGGGCCAGGCGCTGTCCACACTGCAGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS CAA 90 bp | TCCCCGATGTGGTTGAATGCTAGGTTCAGTGAAACCAGGGTTCGGTaGCTGTTCTGCAGTGTGGACAGCGCCTGGCCCAGGAGCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPMWLNARFSETRVR*LFCSVDSAWPRSCA Trigger: GGCGCAGCTCCTGGGCCAGGCGCTGTCCACACTGCAGAACAGCAACCGAACCCTGGTTTCACTGAACCTAGCATTCAACCACATCGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS TCA 72 bp | CGCAGGACCTCGGCCAGCTTCAGTGCTCCCTTGTCTTaGATGTGGTTGTGCGCTAGGGACAGCCAGAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RRTSASFSAPLS*MWLCARDSQRR Trigger: TCTCCTCTGGCTGTCCCTAGCGCACAACCACATTCAAGACAAGGGAGCACTGAAGCTGGCCGAGGTCCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS TCA 72 bp | TGGCCGGGTGACAACTTTGGGAAAGTCCACGTAGCCTaGCCGTGTGCAGAGCTCAGCGAAGTCTGTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPGDNFGKVHVA*PCAELSEVCLQ Trigger: CTGGAGACAGACTTCGCTGAGCTCTGCACACGGTCAGGCTACGTGGACTTTCCCAAAGTTGTCACCCGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS TCA 72 bp | ACAGCGCCTGGCCCAGGAGCTGCGCCCCGTGGTCGTTaGTGTTGTTGTTCCTCAGAGACAAGTGAACAATCG | + |
|
Preference number: 6 (lower is better) Translates to: TAPGPGAAPRGR*CCCSSETSEQS Trigger: CGATTGTTCACTTGTCTCTGAGGAACAACAACATCAACGACCACGGGGCGCAGCTCCTGGGCCAGGCGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS CCA 72 bp | TTTTCTGACGTGGAGGCGGAAGGGACAGAGCTCTGTTaGACCCGTGGCCGGGTGACAACTTTGGGAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSDVEAEGTELC*TRGRVTTLGKS Trigger: GGACTTTCCCAAAGTTGTCACCCGGCCACGGGTCCAACAGAGCTCTGTCCCTTCCGCCTCCACGTCAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
||
| CDS TCA 72 bp | CCGCAATGTAGCCTGCGCCCACATCCCCGATGTGGTTaGATGCTAGGTTCAGTGAAACCAGGGTTCGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQCSLRPHPRCG*MLGSVKPGFGC Trigger: GCAACCGAACCCTGGTTTCACTGAACCTAGCATTCAACCACATCGGGGATGTGGGCGCAGGCTACATTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS GCA 72 bp | TCAGGCTGTGTCCCAGGTGTTCTGACTCCAGGAGGATaGTGCGCTTCTCTTTGGCCCCCATCTTTGTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: SGCVPGVLTPGG*CASLWPPSLSL Trigger: AAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACACCTGGGACACAGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174581.2 |
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| CDS CCA 72 bp | GTCAGCCCCACCTTCCACAAGTTGATGGCCTGCAGCTaGCTGAGGGAGGGCAGACATTTGGAGAAAATACCC | + |
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Preference number: 6 (lower is better) Translates to: VSPTFHKLMACS*LREGRHLEKIP Trigger: GGGTATTTTCTCCAAATGTCTGCCCTCCCTCAGCCAGCTGCAGGCCATCAACTTGTGGAAGGTGGGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS TCA 72 bp | GTGCTGGTTATAATTCAGGCTGTGTCCCAGGTGTTCTaGCTCCAGGAGGATGCTGCGCTTCTCTTTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VLVIIQAVSQVF*LQEDAALLFGP Trigger: GGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACACCTGGGACACAGCCTGAATTATAACCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174581.2 |
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| CDS GCA 72 bp | ATTGCTGATCCCCAACGTCTGAGACTTCTCACGTTCTaGTTTGGAGTCCCCGTATCGGGAGGAGGAAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: IADPQRLRLLTF*FGVPVSGGGRR Trigger: TCGCCTTCCTCCTCCCGATACGGGGACTCCAAAGCAGAACGTGAGAAGTCTCAGACGTTGGGGATCAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS GCA 72 bp | CTGCTCAGGGATGGTTACCTTCCCCTTGCCTGCCTTTaGGGCATCTTCTTTCTTAGGGGTTCCTTGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLRDGYLPLACL*GIFFLRGSLCG Trigger: CCCACACAAGGAACCCCTAAGAAAGAAGATGCCGCAAAGGCAGGCAAGGGGAAGGTAACCATCCCTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CAA 72 bp | CCAGGAGGATGCTGCGCTTCTCTTTGGCCCCCATCTTaGTCGCTTTTCCCTTGCTCATCTTCTGCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PGGCCASLWPPS*SLFPCSSSAQG Trigger: TCCCTGAGCAGAAGATGAGCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CAA 90 bp | ACCTCTGTGATTTGGTTTCGGAGGAGGTTGAGGTGCAAAAGGACCTaGTTCCCAGGCAAGAAGACCTTCCCATCTCGGTGTTCCACGGGC | + |
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Preference number: 6 (lower is better) Translates to: TSVIWFRRRLRCKRT*FPGKKTFPSRCSTG Trigger: GCCCGTGGAACACCGAGATGGGAAGGTCTTCTTGCCTGGGAACAAGGTCCTTTTGCACCTCAACCTCCTCCGAAACCAAATCACAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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| CDS CCA 72 bp | GCTGTTCTGACTCCAGGAGGATGCTGCGCTTCTCTTTaGCCCCCATCTTTGTCGCTTTTCCCTTGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: AVLTPGGCCASL*PPSLSLFPCSS Trigger: AGATGAGCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CCA 72 bp | GGTGTTCTGACTCCAGGAGGATGCTGCGCTTCTCTTTaGCCCCCATCTTTGTCGCTTTTCCCTTGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: GVLTPGGCCASL*PPSLSLFPCSS Trigger: AGATGAGCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174581.2 |
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| CDS CAA 72 bp | AGCTGTTCTGACTCCAGGAGGATGCTGCGCTTCTCTTaGGCCCCCATCTTTGTCGCTTTTCCCTTGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: SCSDSRRMLRFS*APIFVAFPLLI Trigger: GATGAGCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CAA 72 bp | TCCAGCCCCACCTCTGTGATTTGGTTTCGGAGGAGGTaGAGGTGCAAAAGGACCTTGTTCCCAGGCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSPTSVIWFRRR*RCKRTLFPGKK Trigger: CTTCTTGCCTGGGAACAAGGTCCTTTTGCACCTCAACCTCCTCCGAAACCAAATCACAGAGGTGGGGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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| CDS CAA 72 bp | AGGTGTTCTGACTCCAGGAGGATGCTGCGCTTCTCTTaGGCCCCCATCTTTGTCGCTTTTCCCTTGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: RCSDSRRMLRFS*APIFVAFPLLI Trigger: GATGAGCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174581.2 |
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| CDS CAA 90 bp | GTTCTGACTCCAGGAGGATGCTGCGCTTCTCTTTGGCCCCCATCTTaGTCGCTTTTCCCTTGCTCATCTTCTGCTCAGGGATGGTTACCT | + |
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Preference number: 6 (lower is better) Translates to: VLTPGGCCASLWPPS*SLFPCSSSAQGWLP Trigger: AGGTAACCATCCCTGAGCAGAAGATGAGCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS GCA 72 bp | CATCTTCTGCTCAGGGATGGTTACCTTCCCCTTGCCTaGCTTTGCGGCATCTTCTTTCTTAGGGGTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: HLLLRDGYLPLA*LCGIFFLRGSL Trigger: CAAGGAACCCCTAAGAAAGAAGATGCCGCAAAGGCAGGCAAGGGGAAGGTAACCATCCCTGAGCAGAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CCA 72 bp | GCTGTCCAGTCCCATCAGCTTACTAAAGGACTGCTCTaGTATTGGGTTCCCCTCCAGAGATACCTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AVQSHQLTKGLL*YWVPLQRYLPE Trigger: CTCAGGAAGGTATCTCTGGAGGGGAACCCAATACCAGAGCAGTCCTTTAGTAAGCTGATGGGACTGGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CAA 90 bp | TCAACAACCAGCTGTTCTGACTCCAGGAGGATGCTGCGCTTCTCTTaGGCCCCCATCTTTGTCGCTTTTCCCTTGCTCATCTTCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: STTSCSDSRRMLRFS*APIFVAFPLLIFCS Trigger: TGAGCAGAAGATGAGCAAGGGAAAAGCGACAAAGATGGGGGCCAAAGAGAAGCGCAGCATCCTCCTGGAGTCAGAACAGCTGGTTGTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CAA 90 bp | CTCCCTGGCCTTGGCCTTCACAGGGTCCCTTGGCAACATCAGTTCTaGAATCATGACGTGTGTTGGACACTGTGGGTCAAAGCAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: LPGLGLHRVPWQHQF*NHDVCWTLWVKAVF Trigger: AAAAACTGCTTTGACCCACAGTGTCCAACACACGTCATGATTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAGGCCAAGGCCAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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| CDS GCA 72 bp | ATCGTGCTGTCCAGTCCCATCAGCTTACTAAAGGACTaGTCTGGTATTGGGTTCCCCTCCAGAGATACCTTC | + |
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Preference number: 6 (lower is better) Translates to: IVLSSPISLLKD*SGIGFPSRDTF Trigger: GAAGGTATCTCTGGAGGGGAACCCAATACCAGAGCAGTCCTTTAGTAAGCTGATGGGACTGGACAGCACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CCA 72 bp | CAGTCCCATCAGCTTACTAAAGGACTGCTCTGGTATTaGGTTCCCCTCCAGAGATACCTTCCTGAGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: QSHQLTKGLLWY*VPLQRYLPECG Trigger: TCCACACTCAGGAAGGTATCTCTGGAGGGGAACCCAATACCAGAGCAGTCCTTTAGTAAGCTGATGGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS CAA 72 bp | TTGCTCATCTTCTGCTCAGGGATGGTTACCTTCCCCTaGCCTGCCTTTGCGGCATCTTCTTTCTTAGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LLIFCSGMVTFP*PAFAASSFLGV Trigger: AACCCCTAAGAAAGAAGATGCCGCAAAGGCAGGCAAGGGGAAGGTAACCATCCCTGAGCAGAAGATGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS TCA 72 bp | TTGTCCACCAAAGTGACATTGCTGATCCCCAACGTCTaGGACTTCTCACGTTCTGCTTTGGAGTCCCCGTAT | + |
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Preference number: 6 (lower is better) Translates to: LSTKVTLLIPNV*DFSRSALESPY Trigger: ATACGGGGACTCCAAAGCAGAACGTGAGAAGTCTCAGACGTTGGGGATCAGCAATGTCACTTTGGTGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023846.11 |
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| CDS TCA 72 bp | TTGGCCTTCACAGGGTCCCTTGGCAACATCAGTTCTTaGATCATGACGTGTGTTGGACACTGTGGGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LAFTGSLGNISS*IMTCVGHCGSK Trigger: CTTTGACCCACAGTGTCCAACACACGTCATGATTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAGGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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| CDS CAA 72 bp | CTTGGCCTTCACAGGGTCCCTTGGCAACATCAGTTCTaGAATCATGACGTGTGTTGGACACTGTGGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LGLHRVPWQHQF*NHDVCWTLWVK Trigger: TTTGACCCACAGTGTCCAACACACGTCATGATTCAAGAACTGATGTTGCCAAGGGACCCTGTGAAGGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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| CDS TCA 72 bp | TCACAGGGTCCCTTGGCAACATCAGTTCTTGAATCATaGCGTGTGTTGGACACTGTGGGTCAAAGCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SQGPLATSVLES*RVLDTVGQSSF Trigger: AAAACTGCTTTGACCCACAGTGTCCAACACACGTCATGATTCAAGAACTGATGTTGCCAAGGGACCCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023846.11 ENSMUST00000174581.2 |
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