Pregenerated sensors for LRRC66 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067206Ensembl transcript IDs: ENSMUST00000087177.4, ENSMUST00000152215.3
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCAAATaGTCTACCAACAGAGCTCTGTCCCCAGCCTTGGAAGGTTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: TVLRFEPRGLCMVSK*STNRALSPALEGCH Trigger: ATGGCAACCTTCCAAGGCTGGGGACAGAGCTCTGTTGGTAGAGCATTTGCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR GCA 90 bp | CATCATCTACCCCACAAAAGCTGTTTCAGTCTCATGCCTGTTTCCTaGCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: HHLPHKSCFSLMPVS*LCLPRAGLTECASV Trigger: CACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCAGGAAACAGGCATGAGACTGAAACAGCTTTTGTGGGGTAGATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR GCA 90 bp | GTGTGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTaGATGGTGAGCAAATGCTCTACCAACAGAGCTCTGTCCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: VCPIYTVLRFEPRGL*MVSKCSTNRALSPA Trigger: GGCTGGGGACAGAGCTCTGTTGGTAGAGCATTTGCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR CCA 90 bp | CAGATTCGAGCAACTGTGGTTGAGGGTGTGATCCTGGAATCTGGGTaGGAGACTGGGTCTTGTCATGGTAGAACTGACATCTCTCACGAG | + |
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Preference number: 1 (lower is better) Translates to: QIRATVVEGVILESG*ETGSCHGRTDISHE Trigger: CTCGTGAGAGATGTCAGTTCTACCATGACAAGACCCAGTCTCCCACCCAGATTCCAGGATCACACCCTCAACCACAGTTGCTCGAATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR-3UTR GCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCACTCATGCCTGTTTCCTaGCTTTGCCTCCCAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSRADAWSNRAHICQSIPLMPVS*LCLPRA Trigger: AGCCCTTGGGAGGCAAAGGCAGGAAACAGGCATGAG...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR CAA 90 bp | CCAGTGTGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTaGTGCATGGTGAGCAAATGCTCTACCAACAGAGCTCTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PVCPIYTVLRFEPRG*CMVSKCSTNRALSP Trigger: TGGGGACAGAGCTCTGTTGGTAGAGCATTTGCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCACACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATACAGTGCTGAGGTTTaGACCCAGGGGTTTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LSRADAWSNRAHICQSIPYSAEV*TQGFVH Trigger: ATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTA...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR-3UTR TCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATGGGGTTTGTGCATGGTaGGCAAATGCTCTACCAACA | + |
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Preference number: 2 (lower is better) Translates to: SHELMLGAIEPTFVRAFHGVCAW*ANALPT Trigger: TGTTGGTAGAGCATTTGCTCACCATGCACAAACCCC...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCACAATTTATACAGTGCTaGGGTTTGAACCCAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: LSRADAWSNRAHICQSIPQFIQC*GLNPGV Trigger: AACCCCTGGGTTCAAACCTCAGCACTGTATAAATTG...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR TCA 72 bp | GGATGGTGCAGATTCGAGCAACTGTGGTTGAGGGTGTaGTCCTGGAATCTGGGTGGGAGACTGGGTCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: GWCRFEQLWLRV*SWNLGGRLGLV Trigger: GACAAGACCCAGTCTCCCACCCAGATTCCAGGATCACACCCTCAACCACAGTTGCTCGAATCTGCACCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR GCA 72 bp | CCCCACAAAAGCTGTTTCAGTCTCATGCCTGTTTCCTaGCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGT | + |
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Preference number: 3 (lower is better) Translates to: PHKSCFSLMPVS*LCLPRAGLTEC Trigger: ACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCAGGAAACAGGCATGAGACTGAAACAGCTTTTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR GCA 72 bp | AGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCAAATaGTCTACCAACAGAGCTCTGTCCCCAGCCTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: RFEPRGLCMVSK*STNRALSPALE Trigger: TTCCAAGGCTGGGGACAGAGCTCTGTTGGTAGAGCATTTGCTCACCATGCACAAACCCCTGGGTTCAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR CCA 72 bp | GCAACTGTGGTTGAGGGTGTGATCCTGGAATCTGGGTaGGAGACTGGGTCTTGTCATGGTAGAACTGACATC | + |
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Preference number: 3 (lower is better) Translates to: ATVVEGVILESG*ETGSCHGRTDI Trigger: GATGTCAGTTCTACCATGACAAGACCCAGTCTCCCACCCAGATTCCAGGATCACACCCTCAACCACAGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR-3UTR CAA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATTTGAACCCAGGGGTTaGTGCATGGTGAGCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: LSRADAWSNRAHICQSIPFEPRG*CMVSKC Trigger: GCATTTGCTCACCATGCACAAACCCCTGGGTTCAAA...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR TCA 72 bp | TGTGCCAGTGTGCCCAATTTATACAGTGCTGAGGTTTaGACCCAGGGGTTTGTGCATGGTGAGCAAATGCTC | + |
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Preference number: 3 (lower is better) Translates to: CASVPNLYSAEV*TQGFVHGEQML Trigger: GAGCATTTGCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCACACTGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| 3UTR GCA 72 bp | ATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTaGATGGTGAGCAAATGCTCTACCAACAGAGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: IYTVLRFEPRGL*MVSKCSTNRAL Trigger: CAGAGCTCTGTTGGTAGAGCATTTGCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATCTGGGGAGCCGGCTGTaGGAGTGGCCTCCGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHLGSRL*EWPPWR Trigger: GCGCCACGGAGGCCACTCCCACAGCCGGCTCCCCAG...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACATTCCCCCAAGTTCCTaGTTGGGAGGGGCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCLPRAGLTECASVPNLYIPPSS*LGGAGW Trigger: CCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGGAAT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATCAGCACCTGGAGCCTaGGGAGCCGGCTGTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LSRADAWSNRAHICQSIPSAPGA*GAGCGS Trigger: ACTCCCACAGCCGGCTCCCCAGGCTCCAGGTGCTGA...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACGTCCTTGAGTTGCTCTaGGCTCTGCTGATGACCGGG | + |
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Preference number: 4 (lower is better) Translates to: LCLPRAGLTECASVPNLYVLELL*ALLMTG Trigger: CCCGGTCATCAGCAGAGCCCAGAGCAACTCAAGGAC...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACTCTCGACAGAGCTaGGGAAAGTTCCCAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: CLCLPRAGLTECASVPNLYSRQS*GKFPEG Trigger: GCCCTCTGGGAACTTTCCCCAGCTCTGTCGAGAGTA...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATCCCAGCATCTGTTCTaGTTGGACAGCACTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CLCLPRAGLTECASVPNLSQHLF*LDSTVW Trigger: CCACACAGTGCTGTCCAATCAGAACAGATGCTGGGA...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATCCAAAGCATGTAAATaGGCCAGAGGGTCGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CLCLPRAGLTECASVPNLSKACK*ARGSRV Trigger: GACCCTCGACCCTCTGGCGCATTTACATGCTTTGGA...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATACACCGACAGGCAGATaGCCAGCTCAAGGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHTPTGR*PAQGLG Trigger: CCCCAGCCCTTGAGCTGGCCATCTGCCTGTCGGTGT...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACAGCTGCAGGCAGCCATaGAAATCAGACAGCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: LCLPRAGLTECASVPNLYSCRQP*KSDSPM Trigger: CATTGGGCTGTCTGATTTTCATGGCTGCCTGCAGCT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCCCCTGGAAGCTTGGCTaGTGTGTGGCCAGTTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSPWKLG*CVASSL Trigger: TAGGGAACTGGCCACACAGCAGCCAAGCTTCCAGGG...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACATCTCTGAGTTCTACTaGGGACTGTGGCCACATCCC | + |
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Preference number: 4 (lower is better) Translates to: LCLPRAGLTECASVPNLYISEFY*GLWPHP Trigger: GGGATGTGGCCACAGTCCCCAGTAGAACTCAGAGAT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATCTGCTTGGGAGGGGCTaGCTGGTCCCATCATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHLLGRG*LVPSFS Trigger: GGAGAATGATGGGACCAGCCAGCCCCTCCCAAGCAG...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTAGGCGTCTGTGTTCTGTaGCACGTGTCTTATAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: CLCLPRAGLTECASVPNLGVCVL*HVSYRR Trigger: TCTTCTATAAGACACGTGTCACAGAACACAGACGCC...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCAAACATCTCTTGGCTGTaGTGGGTGCAGGTCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: LSRADAWSNRAHICQSIPNISWL*WVQVIP Trigger: CGGGATGACCTGCACCCATCACAGCCAAGAGATGTT...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATCCCAGAGCAGAAAGGTaGATGTCCATCCCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHPRAER*MSIPAW Trigger: CCAGGCAGGGATGGACATGCACCTTTCTGCTCTGGG...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATCTTGGCTGTGATGGGTaGAGGTCATCCCGCCTACTC | + |
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Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHLGCDG*RSSRLL Trigger: GAGTAGGCGGGATGACCTGCACCCATCACAGCCAAG...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | ATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCGGCCAGCTCAAGGGCTaGGGGCTTGTCATCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ISHELMLGAIEPTFVRAFGQLKG*GLVILS Trigger: AGAAAGGATGACAAGCCCCCAGCCCTTGAGCTGGCC...GAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCTTGGACAGCACTGTGTaGGATTGGCTCTGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSLDSTV*DWLCHP Trigger: TGGGTGGCAGAGCCAATCCCACACAGTGCTGTCCAA...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCTCAGCATCAACCCCCTaGAAGCTTGGCTGCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSSASTP*KLGCCV Trigger: CACACAGCAGCCAAGCTTCCAGGGGGTTGATGCTGA...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCATCCAGACTCCGCAATaGCTTCAGCTTCCACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSIQTPQ*LQLPQS Trigger: GGACTGTGGAAGCTGAAGTCATTGCGGAGTCTGGAT...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCAGTCAATGTAGGGCCTTaGAAAAGCCCCCAGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LSRADAWSNRAHICQSIPVNVGP*KSPQAE Trigger: TTCTGCCTGGGGGCTTTTGCAAGGCCCTACATTGAC...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATTCTCTGGAATCCTTTaGGATGTGAGGTCCTCAACA | + |
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Preference number: 4 (lower is better) Translates to: CLCLPRAGLTECASVPNLFSGIL*DVRSST Trigger: TGTTGAGGACCTCACATCGCAAAGGATTCCAGAGAA...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTACAGACATGTTGCAGATaGCTTTCCATATTTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: CLCLPRAGLTECASVPNLQTCCR*LSIFPS Trigger: GGAGGGAAATATGGAAAGCCATCTGCAACATGTCTG...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATGTGTGCATCAGCGTTTaGAAGGCCATGGAGCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHVCISV*KAMERK Trigger: CTTGCGCTCCATGGCCTTCCAAACGCTGATGCACAC...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTACGCTTCACATTTCTCTaGAATCCTTTGCGATGTGAG | + |
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Preference number: 4 (lower is better) Translates to: CLCLPRAGLTECASVPNLRFTFL*NPLRCE Trigger: CTCACATCGCAAAGGATTCCAGAGAAATGTGAAGCG...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACAACGCTGCTTTTTCTTaGTGGGGTTGTCACTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LCLPRAGLTECASVPNLYNAAFS*WGCHCF Trigger: GAAACAGTGACAACCCCATCAAGAAAAAGCAGCGTT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | CATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTAGAAGATCCCATCTGTaGGTCCATGGCTCCCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: HLSRADAWSNRAHICQSIRRSHL*VHGSQR Trigger: CCTTTGGGAGCCATGGACTCACAGATGGGATCTTCT...AATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCAAATGCTTACTTCTCTTaGGGGCACGATCCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSRADAWSNRAHICQSIPNAYFS*GHDPQD Trigger: GTCCTGAGGATCGTGCCCGCAAGAGAAGTAAGCATT...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | CATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTTTCTACTGGGGACTGTaGCCACATCCCTCTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: HLSRADAWSNRAHICQSIFYWGL*PHPSEI Trigger: GATCTCAGAGGGATGTGGCCACAGTCCCCAGTAGAA...AATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCTTGAAGGCTTTGGGGTaGATCGTGCAGATCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSLKALG*IVQILL Trigger: CAACAAGATCTGCACGATTCACCCCAAAGCCTTCAA...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCGATTTTCTGATCTGGTaGGTCTCTGCATTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSDFLIW*VSAFGL Trigger: GAGGCCAAATGCAGAGACTCACCAGATCAGAAAATC...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATATTCATTGCTGTCCTTaGGTTGCTCTGGGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHIHCCP*VALGSA Trigger: AGCAGAGCCCAGAGCAACTCAAGGACAGCAATGAAT...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACTCAAGAAAATCATGGTaGTGCTGCACTGGTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LCLPRAGLTECASVPNLYSRKSW*CCTGEI Trigger: GATTTCACCAGTGCAGCATCACCATGATTTTCTTGA...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCACGTTCTTTTTGTGTGTaGGGCTGGAAGAGAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSRADAWSNRAHICQSIPRSFCV*GWKRTL Trigger: TAGAGTTCTCTTCCAGCCTCACACACAAAAAGAACG...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCCATCCTTTCTGTCAGTaGCCTGTTCATCCTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSHPFCQ*PVHPEN Trigger: ATTCTCAGGATGAACAGGTCACTGACAGAAAGGATG...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCCATCACATCGTCAATaGGAGAATATTCCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISHELMLGAIEPTFVRAFPSHRQ*ENIPGP Trigger: TGGCCCAGGAATATTCTCTCATTGACGATGTGATGG...GAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCACTCAACACTTTCTGCTaGTGTCACACTGTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSRADAWSNRAHICQSIPLNTFC*CHTVLV Trigger: TACAAGGACAGTGTGACATCAGCAGAAAGTGTTGAG...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATAGAGTGTTTCTAAGGTaGGCTTCCTGCGCTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHRVFLR*ASCASH Trigger: ATGTGAAGCGCAGGAAGCTCACCTTAGAAACACTCT...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCAACGATCCTCAGGACCTaGGAGATCTTCATCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LSRADAWSNRAHICQSIPTILRT*EIFIRI Trigger: TATTCTGATGAAGATCTCTCAGGTCCTGAGGATCGT...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTTCACTACACTGCCACTaGTTATCAGCCAAGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSRADAWSNRAHICQSISLHCH*LSAKPS Trigger: ACTTGGCTTGGCTGATAACCAGTGGCAGTGTAGTGA...AATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATGTGAGTCTCTGCATTTaGCCTCTTGTTCTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHVSLCI*PLVLHR Trigger: TCTGTGGAGAACAAGAGGCCAAATGCAGAGACTCAC...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATACCCACGAAGGGTTCTaGTTCTCAGAAAGATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHTHEGF*FSERCR Trigger: CCTACATCTTTCTGAGAACCAGAACCCTTCGTGGGT...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACCATGTGCTAGAGTTTTaGAGAAAGAAGCCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LCLPRAGLTECASVPNLYHVLEF*RKKPQH Trigger: ATGTTGTGGCTTCTTTCTCCAAAACTCTAGCACATG...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACACACACACAAGAGTCTaGACCAGAAATAAGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLPRAGLTECASVPNLYTHTRV*TRNKSV Trigger: AACACTCTTATTTCTGGTCCAGACTCTTGTGTGTGT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCTCAGTGCATTGCTTCTaGGGTCTACCACCTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: ISHELMLGAIEPTFVRAFSVHCF*GLPPVI Trigger: AATTACAGGTGGTAGACCTCAGAAGCAATGCACTGA...GAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | CATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTGTGCCCAGAGTCTCATaGTGTGATAACTTATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSRADAWSNRAHICQSIVPRVS*CDNLCP Trigger: AGGACATAAGTTATCACATCATGAGACTCTGGGCAC...AATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR GCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATATGGAATTGCTCACTTaGCTTTCCTCAGAAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHMELLT*LSSEDP Trigger: GGGATCTTCTGAGGAAAGGCAAGTGAGCAATTCCAT...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTAGAAGAGGTAATGTTTTaGAAGTTGACATTGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLCLPRAGLTECASVPNLEEVMF*KLTLLS Trigger: TGAAAGCAATGTCAACTTCCAAAACATTACCTCTTC...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATGCTTTTCAAGTCACTTaGAGGAGACAGAAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHAFQVT*RRQKKV Trigger: CACCTTCTTCTGTCTCCTCCAAGTGACTTGAAAAGC...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CCA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCAGAAAGATGTAGGTGGTaGGTAGTTTGGTGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRADAWSNRAHICQSIPERCRW*VVWCRS Trigger: AGATCTACACCAAACTACCCACCACCTACATCTTTC...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCTCAGAAAGATGTAGGTaGTGGGTAGTTTGGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSSERCR*WVVWCR Trigger: TCTACACCAAACTACCCACCACCTACATCTTTCTGA...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR TCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCTATTTCCCTCCAGGATaGAGAGGTAATGTTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSYFPPG*RGNVLE Trigger: TTCCAAAACATTACCTCTTCATCCTGGAGGGAAATA...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR TCA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCCTAGAGTCATTTTCCTaGTTTGTCTCACACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSLESFS*FVSHTQ Trigger: TTGTGTGTGTGAGACAAATCAGGAAAATGACTCTAG...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATAGAAACTTCTATCCATaGCGTCTGTGTTCTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHRNFYP*RLCSVT Trigger: TGTCACAGAACACAGACGCCATGGATAGAAGTTTCT...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATTCTCCACAGACATGTTaGAGATGGCTTTCCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: SHELMLGAIEPTFVRAFHSPQTC*RWLSIF Trigger: AAATATGGAAAGCCATCTGCAACATGTCTGTGGAGA...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR GCA 90 bp | ATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCTCGTGCAGATCTTGTTaGTCTTTAAATAGATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISHELMLGAIEPTFVRAFSCRSC*SLNRCF Trigger: AAAGCATCTATTTAAAGAGCAACAAGATCTGCACGA...GAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CAA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTACCCCCAAGTTCCTGCTaGGGAGGGGCTGGCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLCLPRAGLTECASVPNLPPSSC*GGAGWS Trigger: GGACCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGG...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS TCA 90 bp | CTGCTGATGACCGGGGTCTGTTCCGTTGCTTCCCAGCATCTGTTCTaGTTGGACAGCACTGTGTGGGATTGGCTCTGCCACCCACGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLMTGVCSVASQHLF*LDSTVWDWLCHPRR Trigger: CCTTCGTGGGTGGCAGAGCCAATCCCACACAGTGCTGTCCAATCAGAACAGATGCTGGGAAGCAACGGAACAGACCCCGGTCATCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 90 bp | CACTGTCCTTGTATTCCCCCAAGTTCCTGCTTGGGAGGGGCTGGCTaGTCCCATCATTCTCCACAGATGCCTGTTCCTCAGCCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HCPCIPPSSCLGGAG*SHHSPQMPVPQPSS Trigger: GGAGCTTGGCTGAGGAACAGGCATCTGTGGAGAATGATGGGACCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGGAATACAAGGACAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 90 bp | GTCACACTGTCCTTGTATTCCCCCAAGTTCCTGCTTGGGAGGGGCTaGCTGGTCCCATCATTCTCCACAGATGCCTGTTCCTCAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTLSLYSPKFLLGRG*LVPSFSTDACSSAK Trigger: CTTGGCTGAGGAACAGGCATCTGTGGAGAATGATGGGACCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGGAATACAAGGACAGTGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CAA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATGTGTGCATCAGCGTTaGGAAGGCCATGGAGCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLCLPRAGLTECASVPNLCVHQR*EGHGAQ Trigger: TTGCGCTCCATGGCCTTCCAAACGCTGATGCACACA...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS TCA 90 bp | AGGGCTGGGGGCTTGTCATCCTTTCTGTCAGTGACCTGTTCATCCTaGGAATCTCTGAGTTCTACTGGGGACTGTGGCCACATCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAGGLSSFLSVTCSS*ESLSSTGDCGHIPL Trigger: CAGAGGGATGTGGCCACAGTCCCCAGTAGAACTCAGAGATTCTCAGGATGAACAGGTCACTGACAGAAAGGATGACAAGCCCCCAGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 90 bp | CACAAACGTGATGAACACCGACAGGCAGATGGCCAGCTCAAGGGCTaGGGGCTTGTCATCCTTTCTGTCAGTGACCTGTTCATCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HKRDEHRQADGQLKG*GLVILSVSDLFILR Trigger: TCTCAGGATGAACAGGTCACTGACAGAAAGGATGACAAGCCCCCAGCCCTTGAGCTGGCCATCTGCCTGTCGGTGTTCATCACGTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS GCA 90 bp | AATGCGCCAGAGGGTCGAGGGTCACTTTCGATATGCGATGGTGAGTaGGGTCCGGAGGTTTTATGTGCCGTTCTTTTTGTGTGTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NAPEGRGSLSICDGE*GPEVLCAVLFVCEA Trigger: AGCCTCACACACAAAAAGAACGGCACATAAAACCTCCGGACCGCACTCACCATCGCATATCGAAAGTGACCCTCGACCCTCTGGCGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087177.4 ENSMUST00000152215.3 |
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| CDS GCA 90 bp | AGAGTTTTGGAGAAAGAAGCCACAACATCTCTTGGCTGTGATGGGTaGAGGTCATCCCGCCTACTCTCGACAGAGCTGGGGAAAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVLEKEATTSLGCDG*RSSRLLSTELGKVP Trigger: GGGAACTTTCCCCAGCTCTGTCGAGAGTAGGCGGGATGACCTGCACCCATCACAGCCAAGAGATGTTGTGGCTTCTTTCTCCAAAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CAA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACAGAGTGGTCAGTGCATaGCTTCTGAGGTCTACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LCLPRAGLTECASVPNLYRVVSA*LLRSTT Trigger: GGTGGTAGACCTCAGAAGCAATGCACTGACCACTCT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS-3UTR CAA 90 bp | CATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCAACCCCCTGGAAGCTaGGCTGCTGTGTGGCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLSRADAWSNRAHICQSIQPPGS*AAVWPV Trigger: AACTGGCCACACAGCAGCCAAGCTTCCAGGGGGTTG...AATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS TCA 90 bp | ATGGGCTACAGGGCCACTTGGAAGCACGATGCTATCTCCACTTCTTaGTTCATTGCTGTCCTTGAGTTGCTCTGGGCTCTGCTGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: MGYRATWKHDAISTS*FIAVLELLWALLMT Trigger: GGTCATCAGCAGAGCCCAGAGCAACTCAAGGACAGCAATGAATCAAGAAGTGGAGATAGCATCGTGCTTCCAAGTGGCCCTGTAGCCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATGTCAATGTAGGGCCTaGCAAAAGCCCCCAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSRADAWSNRAHICQSIPCQCRA*QKPPGR Trigger: TCTGCCTGGGGGCTTTTGCAAGGCCCTACATTGACA...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCGGGGTCTGTTCCGTaGCTTCCCAGCATCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLSRADAWSNRAHICQSIPGSVP*LPSICS Trigger: AGAACAGATGCTGGGAAGCAACGGAACAGACCCCGG...AATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 90 bp | CCTAATGGAATTGCTCACTTGCCTTTCCTCAGAAGATCCCATCTGTaGGTCCATGGCTCCCAAAGGTTCAGGGCACCCCGTTTCCATACT | + |
|
Preference number: 5 (lower is better) Translates to: PNGIAHLPFLRRSHL*VHGSQRFRAPRFHT Trigger: AGTATGGAAACGGGGTGCCCTGAACCTTTGGGAGCCATGGACTCACAGATGGGATCTTCTGAGGAAAGGCAAGTGAGCAATTCCATTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS GCA 90 bp | CCAAAGCATGTAAATGCGCCAGAGGGTCGAGGGTCACTTTCGATATaGGATGGTGAGTGCGGTCCGGAGGTTTTATGTGCCGTTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PKHVNAPEGRGSLSI*DGECGPEVLCAVLF Trigger: AAAAAGAACGGCACATAAAACCTCCGGACCGCACTCACCATCGCATATCGAAAGTGACCCTCGACCCTCTGGCGCATTTACATGCTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087177.4 ENSMUST00000152215.3 |
||
| CDS GCA 90 bp | AAGCTTGGCTGCTGTGTGGCCAGTTCCCTAATGGAATTGCTCACTTaGCTTTCCTCAGAAGATCCCATCTGTGAGTCCATGGCTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KLGCCVASSLMELLT*LSSEDPICESMAPK Trigger: TTTGGGAGCCATGGACTCACAGATGGGATCTTCTGAGGAAAGGCAAGTGAGCAATTCCATTAGGGAACTGGCCACACAGCAGCCAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 90 bp | CTTTCACTACACTGCCACTGGTTATCAGCCAAGCCAAGTTCCAGGTaGGGCAATTCTAGAGCAATGGTCACAATCGGTACCAGAGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLHCHWLSAKPSSR*GNSRAMVTIGTRVV Trigger: GACCACTCTGGTACCGATTGTGACCATTGCTCTAGAATTGCCCCACCTGGAACTTGGCTTGGCTGATAACCAGTGGCAGTGTAGTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACACTGAGTTGATTCCTTaGAAGGATCAGCACCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCLPRAGLTECASVPNLYTELIP*KDQHLE Trigger: CTCCAGGTGCTGATCCTTCAAAGGAATCAACTCAGT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 90 bp | CTTTCTGTCAGTGACCTGTTCATCCTGAGAATCTCTGAGTTCTACTaGGGACTGTGGCCACATCCCTCTGAGATCACCATAGCCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSVSDLFILRISEFY*GLWPHPSEITIAIL Trigger: AAGGATGGCTATGGTGATCTCAGAGGGATGTGGCCACAGTCCCCAGTAGAACTCAGAGATTCTCAGGATGAACAGGTCACTGACAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATTTTTCTTGATGGGGTaGTCACTGTTTCCACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLCLPRAGLTECASVPNLFFLMG*SLFPQS Trigger: GCTTTGTGGAAACAGTGACAACCCCATCAAGAAAAA...TAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACAGGAGTACCACTGAGTaGATTCCTTTGAAGGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCLPRAGLTECASVPNLYRSTTE*IPLKDQ Trigger: CTGATCCTTCAAAGGAATCAACTCAGTGGTACTCCT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | TGCCCAATTTATACAGTGCTGAGGTTTGAACCCAGGGGTTTGTGCATGGTGAGCTTGGTACTCCATGTGTaGAGCACCTTCAATGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPIYTVLRFEPRGLCMVSLVLHV*STFNVA Trigger: GGCGACATTGAAGGTGCTCAACACATGGAGTACCAA...GCTCACCATGCACAAACCCCTGGGTTCAAACCTCAGCACTGTATAAATTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCATTGCTGTCCTTGAGTaGCTCTGGGCTCTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ISHELMLGAIEPTFVRAFIAVLE*LWALLM Trigger: CATCAGCAGAGCCCAGAGCAACTCAAGGACAGCAAT...GAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | TCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATGATTCATTGCTGTCCTaGAGTTGCTCTGGGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHELMLGAIEPTFVRAFHDSLLS*SCSGLC Trigger: GCAGAGCCCAGAGCAACTCAAGGACAGCAATGAATC...ATGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACCCACTTCTTGATTCATaGCTGTCCTTGAGTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLPRAGLTECASVPNLYPLLDS*LSLSCS Trigger: AGAGCAACTCAAGGACAGCAATGAATCAAGAAGTGG...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCAAGCCACAACATCTCTaGGCTGTGATGGGTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISHELMLGAIEPTFVRAFKPQHL*AVMGAG Trigger: ACCTGCACCCATCACAGCCAAGAGATGTTGTGGCTT...GAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 90 bp | GCAGGCAGCCATGAAAATCAGACAGCCCAATGTGAACTATCCTGTTaGATGACAGATCCAGACTCCGCAATGACTTCAGCTTCCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGSHENQTAQCELSC*MTDPDSAMTSASTV Trigger: GACTGTGGAAGCTGAAGTCATTGCGGAGTCTGGATCTGTCATTCAACAGGATAGTTCACATTGGGCTGTCTGATTTTCATGGCTGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACAAACGCTGCTTTTTCTaGATGGGGTTGTCACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LCLPRAGLTECASVPNLYKRCFF*MGLSLF Trigger: AAACAGTGACAACCCCATCAAGAAAAAGCAGCGTTT...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 90 bp | AGTCACTTGGAGGAGACAGAAGAAGGTGTGTATCCCTGGATTTTCTaGTCTGGTGAGTCTCTGCATTTGGCCTCTTGTTCTCCACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SHLEETEEGVYPWIF*SGESLHLASCSPQT Trigger: TGTCTGTGGAGAACAAGAGGCCAAATGCAGAGACTCACCAGATCAGAAAATCCAGGGATACACACCTTCTTCTGTCTCCTCCAAGTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 90 bp | GGTGAGCTTCCTGCGCTTCACATTTCTCTGGAATCCTTTGCGATGTaGGGTCCTCAACACTTTCTGCTGATGTCACACTGTCCTTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: GELPALHISLESFAM*GPQHFLLMSHCPCI Trigger: AATACAAGGACAGTGTGACATCAGCAGAAAGTGTTGAGGACCTCACATCGCAAAGGATTCCAGAGAAATGTGAAGCGCAGGAAGCTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCGGCTTTTCAAGTCACTaGGAGGAGACAGAAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISHELMLGAIEPTFVRAFGFSSH*EETEEG Trigger: ACCTTCTTCTGTCTCCTCCAAGTGACTTGAAAAGCC...GAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATGGAAGCCCTTGTTaGAGTAGGCATTATCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISHELMLGAIEPTFVRAFHGSPC*SRHYLS Trigger: GCTCAGATAATGCCTACTCAAACAAGGGCTTCCATG...GAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCAAATGGAATTGCTCACTaGCCTTTCCTCAGAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRADAWSNRAHICQSIPNGIAH*PFLRRS Trigger: GGATCTTCTGAGGAAAGGCAAGTGAGCAATTCCATT...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CATCTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTTTTCTCTGGAATCCTTaGCGATGTGAGGTCCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLSRADAWSNRAHICQSIFLWNP*RCEVLN Trigger: GTTGAGGACCTCACATCGCAAAGGATTCCAGAGAAA...AATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS GCA 90 bp | AGGCTTTGGGGTGAATCGTGCAGATCTTGTTGCTCTTTAAATAGATaGTTTCCAGCTGCAGGCAGCCATGAAAATCAGACAGCCCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: RLWGESCRSCCSLNR*FPAAGSHENQTAQC Trigger: ACATTGGGCTGTCTGATTTTCATGGCTGCCTGCAGCTGGAAAGCATCTATTTAAAGAGCAACAAGATCTGCACGATTCACCCCAAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 90 bp | GAGGTAATGTTTTGGAAGTTGACATTGCTTTCACTACACTGCCACTaGTTATCAGCCAAGCCAAGTTCCAGGTGGGGCAATTCTAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVMFWKLTLLSLHCH*LSAKPSSRWGNSRA Trigger: TGCTCTAGAATTGCCCCACCTGGAACTTGGCTTGGCTGATAACCAGTGGCAGTGTAGTGAAAGCAATGTCAACTTCCAAAACATTACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCTCCCAAGGGCTGGGCTGACAGAATGTGCCAGTGTGCCCAATTTATACGTAATGTTTTGGAAGTaGACATTGCTTTCACTACAC | + |
|
Preference number: 5 (lower is better) Translates to: LCLPRAGLTECASVPNLYVMFWK*TLLSLH Trigger: GTGTAGTGAAAGCAATGTCAACTTCCAAAACATTAC...GTATAAATTGGGCACACTGGCACATTCTGTCAGCCCAGCCCTTGGGAGGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS-3UTR CAA 90 bp | CTCTCACGAGCTGATGCTTGGAGCAATAGAGCCCACATTTGTCAGAGCATTCCATTCTCCACAGACATGTaGCAGATGGCTTTCCATATT | + |
|
Preference number: 5 (lower is better) Translates to: LSRADAWSNRAHICQSIPFSTDM*QMAFHI Trigger: AATATGGAAAGCCATCTGCAACATGTCTGTGGAGAA...TGGAATGCTCTGACAAATGTGGGCTCTATTGCTCCAAGCATCAGCTCGTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 90 bp | CACGTTGATCTATTCTCAGGGTCAAGGGAGCTAGAGTCATTTTCCTaGTTTGTCTCACACACACAAGAGTCTGGACCAGAAATAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HVDLFSGSRELESFS*FVSHTQESGPEIRV Trigger: CACTCTTATTTCTGGTCCAGACTCTTGTGTGTGTGAGACAAATCAGGAAAATGACTCTAGCTCCCTTGACCCTGAGAATAGATCAACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 90 bp | CTCCACAGACATGTTGCAGATGGCTTTCCATATTTCCCTCCAGGATaGAGAGGTAATGTTTTGGAAGTTGACATTGCTTTCACTACACTG | + |
|
Preference number: 5 (lower is better) Translates to: LHRHVADGFPYFPPG*RGNVLEVDIAFTTL Trigger: CAGTGTAGTGAAAGCAATGTCAACTTCCAAAACATTACCTCTTCATCCTGGAGGGAAATATGGAAAGCCATCTGCAACATGTCTGTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CAA 72 bp | GCTGCACTGGTGAAATCGCCTTGTGTGCATCAGCGTTaGGAAGGCCATGGAGCGCAAGATGGGCTACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AALVKSPCVHQR*EGHGAQDGLQG Trigger: GCCCTGTAGCCCATCTTGCGCTCCATGGCCTTCCAAACGCTGATGCACACAAGGCGATTTCACCAGTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 72 bp | ACCGGGGTCTGTTCCGTTGCTTCCCAGCATCTGTTCTaGTTGGACAGCACTGTGTGGGATTGGCTCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TGVCSVASQHLF*LDSTVWDWLCH Trigger: GTGGCAGAGCCAATCCCACACAGTGCTGTCCAATCAGAACAGATGCTGGGAAGCAACGGAACAGACCCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS GCA 72 bp | GAGAAAGAAGCCACAACATCTCTTGGCTGTGATGGGTaGAGGTCATCCCGCCTACTCTCGACAGAGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EKEATTSLGCDG*RSSRLLSTELG Trigger: CCCCAGCTCTGTCGAGAGTAGGCGGGATGACCTGCACCCATCACAGCCAAGAGATGTTGTGGCTTCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 72 bp | GATGAACACCGACAGGCAGATGGCCAGCTCAAGGGCTaGGGGCTTGTCATCCTTTCTGTCAGTGACCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DEHRQADGQLKG*GLVILSVSDLF Trigger: GAACAGGTCACTGACAGAAAGGATGACAAGCCCCCAGCCCTTGAGCTGGCCATCTGCCTGTCGGTGTTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 72 bp | GGGTCTGTTCCGTTGCTTCCCAGCATCTGTTCTGATTaGACAGCACTGTGTGGGATTGGCTCTGCCACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSVPLLPSICSD*TALCGIGSATH Trigger: GTGGGTGGCAGAGCCAATCCCACACAGTGCTGTCCAATCAGAACAGATGCTGGGAAGCAACGGAACAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 72 bp | TGTATTCCCCCAAGTTCCTGCTTGGGAGGGGCTGGCTaGTCCCATCATTCTCCACAGATGCCTGTTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CIPPSSCLGGAG*SHHSPQMPVPQ Trigger: CTGAGGAACAGGCATCTGTGGAGAATGATGGGACCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGGAATACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 72 bp | TCCTTGTATTCCCCCAAGTTCCTGCTTGGGAGGGGCTaGCTGGTCCCATCATTCTCCACAGATGCCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLYSPKFLLGRG*LVPSFSTDACS Trigger: GGAACAGGCATCTGTGGAGAATGATGGGACCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGGAATACAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CAA 90 bp | TGCGATGTGAGGTCCTCAACACTTTCTGCTGATGTCACACTGTCCTaGTATTCCCCCAAGTTCCTGCTTGGGAGGGGCTGGCTGGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CDVRSSTLSADVTLS*YSPKFLLGRGWLVP Trigger: TGGGACCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGGAATACAAGGACAGTGTGACATCAGCAGAAAGTGTTGAGGACCTCACATCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 72 bp | TGTGCATCAGCGTTTGGAAGGCCATGGAGCGCAAGATaGGCTACAGGGCCACTTGGAAGCACGATGCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: CASAFGRPWSAR*ATGPLGSTMLS Trigger: AGATAGCATCGTGCTTCCAAGTGGCCCTGTAGCCCATCTTGCGCTCCATGGCCTTCCAAACGCTGATGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 72 bp | TGTCACACTGTCCTTGTATTCCCCCAAGTTCCTGCTTaGGAGGGGCTGGCTGGTCCCATCATTCTCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: CHTVLVFPQVPA*EGLAGPIILHR Trigger: TCTGTGGAGAATGATGGGACCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGGAATACAAGGACAGTGTGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CAA 72 bp | AGCATCTCTGTTGCCGTAGCCTGTCAATGTAGGGCCTaGCAAAAGCCCCCAGGCAGAAAGCCACCACAAACG | + |
|
Preference number: 6 (lower is better) Translates to: SISVAVACQCRA*QKPPGRKPPQT Trigger: CGTTTGTGGTGGCTTTCTGCCTGGGGGCTTTTGCAAGGCCCTACATTGACAGGCTACGGCAACAGAGATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CAA 72 bp | ATGTCACACTGTCCTTGTATTCCCCCAAGTTCCTGCTaGGGAGGGGCTGGCTGGTCCCATCATTCTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: MSHCPCIPPSSC*GGAGWSHHSPQ Trigger: CTGTGGAGAATGATGGGACCAGCCAGCCCCTCCCAAGCAGGAACTTGGGGGAATACAAGGACAGTGTGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS GCA 72 bp | AGTCTCTCCTCAGCATCAACCCCCTGGAAGCTTGGCTaGTGTGTGGCCAGTTCCCTAATGGAATTGCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: SLSSASTPWKLG*CVASSLMELLT Trigger: AGTGAGCAATTCCATTAGGGAACTGGCCACACAGCAGCCAAGCTTCCAGGGGGTTGATGCTGAGGAGAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 72 bp | CTGTGTGGGATTGGCTCTGCCACCCACGAAGGGTTCTaGTTCTCAGAAAGATGTAGGTGGTGGGTAGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCGIGSATHEGF*FSERCRWWVVW Trigger: CCAAACTACCCACCACCTACATCTTTCTGAGAACCAGAACCCTTCGTGGGTGGCAGAGCCAATCCCACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CAA 90 bp | ACCCCCTGGAAGCTTGGCTGCTGTGTGGCCAGTTCCCTAATGGAATaGCTCACTTGCCTTTCCTCAGAAGATCCCATCTGTGAGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: TPWKLGCCVASSLME*LTCLSSEDPICESM Trigger: CATGGACTCACAGATGGGATCTTCTGAGGAAAGGCAAGTGAGCAATTCCATTAGGGAACTGGCCACACAGCAGCCAAGCTTCCAGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS GCA 72 bp | GAGGGTCGAGGGTCACTTTCGATATGCGATGGTGAGTaGGGTCCGGAGGTTTTATGTGCCGTTCTTTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: EGRGSLSICDGE*GPEVLCAVLFV Trigger: CACAAAAAGAACGGCACATAAAACCTCCGGACCGCACTCACCATCGCATATCGAAAGTGACCCTCGACCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087177.4 ENSMUST00000152215.3 |
||
| CDS CCA 72 bp | CCAAGCCAAGTTCCAGGTGGGGCAATTCTAGAGCAATaGTCACAATCGGTACCAGAGTGGTCAGTGCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSQVPGGAILEQ*SQSVPEWSVHC Trigger: GCAATGCACTGACCACTCTGGTACCGATTGTGACCATTGCTCTAGAATTGCCCCACCTGGAACTTGGCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 72 bp | CACTGCCACTGGTTATCAGCCAAGCCAAGTTCCAGGTaGGGCAATTCTAGAGCAATGGTCACAATCGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: HCHWLSAKPSSR*GNSRAMVTIGT Trigger: GGTACCGATTGTGACCATTGCTCTAGAATTGCCCCACCTGGAACTTGGCTTGGCTGATAACCAGTGGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CAA 90 bp | TGTTTGCATGTGCTAGAGTTTTGGAGAAAGAAGCCACAACATCTCTaGGCTGTGATGGGTGCAGGTCATCCCGCCTACTCTCGACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLHVLEFWRKKPQHL*AVMGAGHPAYSRQS Trigger: GCTCTGTCGAGAGTAGGCGGGATGACCTGCACCCATCACAGCCAAGAGATGTTGTGGCTTCTTTCTCCAAAACTCTAGCACATGCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 72 bp | AGTTTTGGAGAAAGAAGCCACAACATCTCTTGGCTGTaGTGGGTGCAGGTCATCCCGCCTACTCTCGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFGERSHNISWL*WVQVIPPTLDR Trigger: TCTGTCGAGAGTAGGCGGGATGACCTGCACCCATCACAGCCAAGAGATGTTGTGGCTTCTTTCTCCAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CAA 72 bp | CTTCAGCTTCCACAGTCCTTTAGGAGTACCACTGAGTaGATTCCTTTGAAGGATCAGCACCTGGAGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LQLPQSFRSTTE*IPLKDQHLEPG Trigger: CCCAGGCTCCAGGTGCTGATCCTTCAAAGGAATCAACTCAGTGGTACTCCTAAAGGACTGTGGAAGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CAA 72 bp | GTGCTAGAGTTTTGGAGAAAGAAGCCACAACATCTCTaGGCTGTGATGGGTGCAGGTCATCCCGCCTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLEFWRKKPQHL*AVMGAGHPAYS Trigger: AGAGTAGGCGGGATGACCTGCACCCATCACAGCCAAGAGATGTTGTGGCTTCTTTCTCCAAAACTCTAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 72 bp | TGGGGTTCTATGTCACCATATGTGCCCAGAGTCTCATaGTGTGATAACTTATGTCCTGGGAGTTGGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WGSMSPYVPRVS*CDNLCPGSWGH Trigger: GTGGCCCCAACTCCCAGGACATAAGTTATCACATCATGAGACTCTGGGCACATATGGTGACATAGAACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS GCA 72 bp | TGCTGTGTGGCCAGTTCCCTAATGGAATTGCTCACTTaGCTTTCCTCAGAAGATCCCATCTGTGAGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: CCVASSLMELLT*LSSEDPICESM Trigger: CATGGACTCACAGATGGGATCTTCTGAGGAAAGGCAAGTGAGCAATTCCATTAGGGAACTGGCCACACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 72 bp | AGTGACCTGTTCATCCTGAGAATCTCTGAGTTCTACTaGGGACTGTGGCCACATCCCTCTGAGATCACCATA | + |
|
Preference number: 6 (lower is better) Translates to: SDLFILRISEFY*GLWPHPSEITI Trigger: TATGGTGATCTCAGAGGGATGTGGCCACAGTCCCCAGTAGAACTCAGAGATTCTCAGGATGAACAGGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CAA 72 bp | GTTGAGCACCTTCAATGTCGCCATGGAAGCCCTTGTTaGAGTAGGCATTATCTGAGCCGGGCCTTTTATTCG | + |
|
Preference number: 6 (lower is better) Translates to: VEHLQCRHGSPC*SRHYLSRAFYS Trigger: CGAATAAAAGGCCCGGCTCAGATAATGCCTACTCAAACAAGGGCTTCCATGGCGACATTGAAGGTGCTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 72 bp | CCTGCGCTTCACATTTCTCTGGAATCCTTTGCGATGTaGGGTCCTCAACACTTTCTGCTGATGTCACACTGT | + |
|
Preference number: 6 (lower is better) Translates to: PALHISLESFAM*GPQHFLLMSHC Trigger: ACAGTGTGACATCAGCAGAAAGTGTTGAGGACCTCACATCGCAAAGGATTCCAGAGAAATGTGAAGCGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS CCA 72 bp | CTCTGCCTTGCTCTGGATGAGGCTTTTCAAGTCACTTaGAGGAGACAGAAGAAGGTGTGTATCCCTGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: LCLALDEAFQVT*RRQKKVCIPGF Trigger: AAATCCAGGGATACACACCTTCTTCTGTCTCCTCCAAGTGACTTGAAAAGCCTCATCCAGAGCAAGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
||
| CDS TCA 72 bp | CTGGTACTCGGGATTGAAGGAAACGCTGCTTTTTCTTaGTGGGGTTGTCACTGTTTCCACAAAGCAAAGACC | + |
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Preference number: 6 (lower is better) Translates to: LVLGIEGNAAFS*WGCHCFHKAKT Trigger: GGTCTTTGCTTTGTGGAAACAGTGACAACCCCATCAAGAAAAAGCAGCGTTTCCTTCAATCCCGAGTACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087177.4 ENSMUST00000152215.3 |
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| CDS TCA 72 bp | GAGGAGACAGAAGAAGGTGTGTATCCCTGGATTTTCTaGTCTGGTGAGTCTCTGCATTTGGCCTCTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: EETEEGVYPWIF*SGESLHLASCS Trigger: AGAACAAGAGGCCAAATGCAGAGACTCACCAGATCAGAAAATCCAGGGATACACACCTTCTTCTGTCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS TCA 72 bp | AATCCTTTGCGATGTGAGGTCCTCAACACTTTCTGCTaGTGTCACACTGTCCTTGTATTCCCCCAAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NPLRCEVLNTFC*CHTVLVFPQVP Trigger: AGGAACTTGGGGGAATACAAGGACAGTGTGACATCAGCAGAAAGTGTTGAGGACCTCACATCGCAAAGGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS GCA 72 bp | GTGTGTATCCCTGGATTTTCTGATCTGGTGAGTCTCTaGATTTGGCCTCTTGTTCTCCACAGACATGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: VCIPGFSDLVSL*IWPLVLHRHVA Trigger: TGCAACATGTCTGTGGAGAACAAGAGGCCAAATGCAGAGACTCACCAGATCAGAAAATCCAGGGATACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 72 bp | TTTTGGAAGTTGACATTGCTTTCACTACACTGCCACTaGTTATCAGCCAAGCCAAGTTCCAGGTGGGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: FWKLTLLSLHCH*LSAKPSSRWGN Trigger: ATTGCCCCACCTGGAACTTGGCTTGGCTGATAACCAGTGGCAGTGTAGTGAAAGCAATGTCAACTTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CAA 72 bp | GTCTCTGCATTTGGCCTCTTGTTCTCCACAGACATGTaGCAGATGGCTTTCCATATTTCCCTCCAGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: VSAFGLLFSTDM*QMAFHISLQDE Trigger: TTCATCCTGGAGGGAAATATGGAAAGCCATCTGCAACATGTCTGTGGAGAACAAGAGGCCAAATGCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CAA 90 bp | TATGCGATGGTGAGTGCGGTCCGGAGGTTTTATGTGCCGTTCTTTTaGTGTGTGAGGCTGGAAGAGAACTCTAAAGAAGTAGAAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: YAMVSAVRRFYVPFF*CVRLEENSKEVETS Trigger: AGAAGTTTCTACTTCTTTAGAGTTCTCTTCCAGCCTCACACACAAAAAGAACGGCACATAAAACCTCCGGACCGCACTCACCATCGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087177.4 ENSMUST00000152215.3 |
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| CDS TCA 72 bp | CTATTCTCAGGGTCAAGGGAGCTAGAGTCATTTTCCTaGTTTGTCTCACACACACAAGAGTCTGGACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LFSGSRELESFS*FVSHTQESGPE Trigger: TTCTGGTCCAGACTCTTGTGTGTGTGAGACAAATCAGGAAAATGACTCTAGCTCCCTTGACCCTGAGAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CAA 90 bp | CATATTTCCCTCCAGGATGAAGAGGTAATGTTTTGGAAGTTGACATaGCTTTCACTACACTGCCACTGGTTATCAGCCAAGCCAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HISLQDEEVMFWKLT*LSLHCHWLSAKPSS Trigger: GGAACTTGGCTTGGCTGATAACCAGTGGCAGTGTAGTGAAAGCAATGTCAACTTCCAAAACATTACCTCTTCATCCTGGAGGGAAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CAA 90 bp | GCTTTCCATATTTCCCTCCAGGATGAAGAGGTAATGTTTTGGAAGTaGACATTGCTTTCACTACACTGCCACTGGTTATCAGCCAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AFHISLQDEEVMFWK*TLLSLHCHWLSAKP Trigger: TGGCTTGGCTGATAACCAGTGGCAGTGTAGTGAAAGCAATGTCAACTTCCAAAACATTACCTCTTCATCCTGGAGGGAAATATGGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS TCA 72 bp | CAAGAGTCTGGACCAGAAATAAGAGTGTTTCTAAGGTaGGCTTCCTGCGCTTCACATTTCTCTGGAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: QESGPEIRVFLR*ASCASHFSGIL Trigger: AAGGATTCCAGAGAAATGTGAAGCGCAGGAAGCTCACCTTAGAAACACTCTTATTTCTGGTCCAGACTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CAA 72 bp | CTCCAGGATGAAGAGGTAATGTTTTGGAAGTTGACATaGCTTTCACTACACTGCCACTGGTTATCAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LQDEEVMFWKLT*LSLHCHWLSAK Trigger: CTTGGCTGATAACCAGTGGCAGTGTAGTGAAAGCAATGTCAACTTCCAAAACATTACCTCTTCATCCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS CCA 72 bp | TTCCATATTTCCCTCCAGGATGAAGAGGTAATGTTTTaGAAGTTGACATTGCTTTCACTACACTGCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: FHISLQDEEVMF*KLTLLSLHCHW Trigger: CCAGTGGCAGTGTAGTGAAAGCAATGTCAACTTCCAAAACATTACCTCTTCATCCTGGAGGGAAATATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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| CDS TCA 72 bp | CATGTTGCAGATGGCTTTCCATATTTCCCTCCAGGATaGAGAGGTAATGTTTTGGAAGTTGACATTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: HVADGFPYFPPG*RGNVLEVDIAF Trigger: GAAAGCAATGTCAACTTCCAAAACATTACCTCTTCATCCTGGAGGGAAATATGGAAAGCCATCTGCAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087177.4 |
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