Pregenerated sensors for LRRC59 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020869Ensembl transcript IDs: ENSMUST00000021239.7
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGAATGGCAGACCTATCCAGATGGGCCACTAGGGCTACACTGCTaGACTATGACAGGTCCTTGCTCCTCTAGGGAGCTTGCAAATGGG | + |
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Preference number: 1 (lower is better) Translates to: FEWQTYPDGPLGLHC*TMTGPCSSRELANG Trigger: CCCATTTGCAAGCTCCCTAGAGGAGCAAGGACCTGTCATAGTTCAGCAGTGTAGCCCTAGTGGCCCATCTGGATAGGTCTGCCATTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR GCA 90 bp | GCTGGGTTACCCAGTATTGCTAGTCCTCTAATCCCAGTAACACACTaGCCTCCGATTGTCCTGGTTACCCAGGGAGGAATGAAAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: AGLPSIASPLIPVTH*PPIVLVTQGGMKER Trigger: CCTTTCTTTCATTCCTCCCTGGGTAACCAGGACAATCGGAGGGCAGTGTGTTACTGGGATTAGAGGACTAGCAATACTGGGTAACCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR TCA 90 bp | AGGCAAAATTCCACAGGAGTTAAGTTTCCCAGGACCCTGATGATATaGGATCTATTTGTGGGTGGTAAGACTGTTATGAAAGATTCGCTT | + |
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Preference number: 1 (lower is better) Translates to: RQNSTGVKFPRTLMI*DLFVGGKTVMKDSL Trigger: AAGCGAATCTTTCATAACAGTCTTACCACCCACAAATAGATCTCATATCATCAGGGTCCTGGGAAACTTAACTCCTGTGGAATTTTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CCA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGGTAGCAGCAGGGAGGTaGGCGGCTCTGCCCTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: AYMAELSGEEKSKAFLPVVAAGR*AALPWL Trigger: CAACCAGGGCAGAGCCGCCCACCTCCCTGCTGCTAC...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR TCA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGTCCACCAGGGAACCCTaGCTATGGAACAGAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AYMAELSGEEKSKAFLPVSTREP*LWNRSP Trigger: AGGACTTCTGTTCCATAGTCAGGGTTCCCTGGTGGA...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR TCA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGCTAGGGCTACACTGCTaGACTATGACAGGTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: AYMAELSGEEKSKAFLPVLGLHC*TMTGPC Trigger: GCAAGGACCTGTCATAGTTCAGCAGTGTAGCCCTAG...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR GCA 90 bp | CAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGGCAAGGAACCCGGCCTaGTGCCATTTTGTGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: QEISIKSRSQSELLPAGWARNPA*CHFVEA Trigger: GGCTTCCACAAAATGGCAGCAGGCCGGGTTCCTTGC...CCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTTGACTTCATGCAGCTGTTGTaGAGAGACTGGGAAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: ISIKSRSQSELLPAGWLDFMQLL*RDWERG Trigger: TCCCCTTTCCCAGTCTCTTCACAACAGCTGCATGAA...GTCAAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR TCA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGAGACACAGTTGTTTCTaGTCCCTTCATGCAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: AYMAELSGEEKSKAFLPVRHSCF*SLHAAV Trigger: AACAGCTGCATGAAGGGATCAGAAACAACTGTGTCT...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR TCA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGTTACCCAGGGAGGAATaGAAGAAAGGGTTTATGACA | + |
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Preference number: 2 (lower is better) Translates to: AYMAELSGEEKSKAFLPVLPREE*KKGFMT Trigger: TGTCATAAACCCTTTCTTTCATTCCTCCCTGGGTAA...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTTGACGAGACAACTCTGGTGTaGGTTCATCCTCTTGGGTAT | + |
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Preference number: 2 (lower is better) Translates to: ISIKSRSQSELLPAGWLDETTLV*VHPLGY Trigger: ATACCCAAGAGGATGAACTCACACCAGAGTTGTCTC...GTCAAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGGGGAAGGAGGAAAACTaGAATGAGAGCCTGGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: QEISIKSRSQSELLPAGWGKEEN*NESLVV Trigger: CACAACCAGGCTCTCATTCCAGTTTTCCTCCTTCCC...CCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCATGGCAGAACTGTCTaGGGAGGAAAAATCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: QEISIKSRSQSELLPAGWHGRTV*GGKIQG Trigger: GCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATG...CCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCAGTAGAAAGGAACCTTaGCTTACACAGCTTTGTATA | + |
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Preference number: 2 (lower is better) Translates to: CGPTWQNCLGRKNPRPFFSRKEP*LTQLCI Trigger: TATACAAAGCTGTGTAAGGCAAGGTTCCTTTCTACT...GAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGCCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR GCA 90 bp | ATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTGCAGAGTTCCCTCTaGTTCCAGGCCATTCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: MMRLTPVFMMSPYVCSMYLQSSL*FQAIRE Trigger: CTCCCGAATGGCCTGGAAGCAGAGGGAACTCTGCAA...ATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR TCA 90 bp | ATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTGCCTCAGACTAGCCTaGACACTGCTGGCAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: MMRLTPVFMMSPYVCSMYCLRLA*TLLASH Trigger: ATGACTTGCCAGCAGTGTTCAGGCTAGTCTGAGGCA...ATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR GCA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTGCCACAGTACGGCTTTaGAGAGTTCCCTCTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFATVRL*RVPSAS Trigger: GGAAGCAGAGGGAACTCTGCAAAGCCGTACTGTGGC...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTGCAGACCTATCCAGATaGGCCACTAGGGCTACACTG | + |
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Preference number: 2 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFADLSR*ATRATL Trigger: CAGTGTAGCCCTAGTGGCCCATCTGGATAGGTCTGC...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTGATGCTGAGGAGGTGTaGGCCTACATGGCAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFDAEEV*AYMAEL Trigger: CAGTTCTGCCATGTAGGCCCACACCTCCTCAGCATC...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR GCA 72 bp | ACACCGAGTGCTAGTGGAGCAGCCACAGTACGGCTTTaGAGAGTTCCCTCTGCTTCCAGGCCATTCGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: TPSASGAATVRL*RVPSASRPFGS Trigger: ACTCCCGAATGGCCTGGAAGCAGAGGGAACTCTGCAAAGCCGTACTGTGGCTGCTCCACTAGCACTCGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR CCA 72 bp | GTGCCTCAGACTAGCCTGAACACTGCTGGCAAGTCATaGATGAGACGGCACCTCCTGCCTCAACATGTGACA | + |
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Preference number: 3 (lower is better) Translates to: VPQTSLNTAGKS*MRRHLLPQHVT Trigger: TGTCACATGTTGAGGCAGGAGGTGCCGTCTCATCCATGACTTGCCAGCAGTGTTCAGGCTAGTCTGAGGCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR TCA 72 bp | CAGACCTATCCAGATGGGCCACTAGGGCTACACTGCTaGACTATGACAGGTCCTTGCTCCTCTAGGGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: QTYPDGPLGLHC*TMTGPCSSREL Trigger: AAGCTCCCTAGAGGAGCAAGGACCTGTCATAGTTCAGCAGTGTAGCCCTAGTGGCCCATCTGGATAGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR GCA 72 bp | CCCAGTATTGCTAGTCCTCTAATCCCAGTAACACACTaGCCTCCGATTGTCCTGGTTACCCAGGGAGGAATG | + |
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Preference number: 3 (lower is better) Translates to: PSIASPLIPVTH*PPIVLVTQGGM Trigger: CATTCCTCCCTGGGTAACCAGGACAATCGGAGGGCAGTGTGTTACTGGGATTAGAGGACTAGCAATACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CAA 90 bp | ATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTTGACCGCCACCATGTGACTTaGTTTCCCTTTGACTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: ISIKSRSQSELLPAGWLDRHHVT*FPFDSH Trigger: GTGGGAGTCAAAGGGAAACAAAGTCACATGGTGGCG...GTCAAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCGTTTCTAGGTTGCCTTaGAGGTATTTCATCACACCG | + |
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Preference number: 3 (lower is better) Translates to: CGPTWQNCLGRKNPRPFFVSRLP*RYFITP Trigger: CGGTGTGATGAAATACCTCAAAGGCAACCTAGAAAC...GAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGCCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR TCA 72 bp | ATGTTTAGTTATGTATCACTCTGCAGCGCCACCATGTaGCTTTGTTTCCCTTTGACTCCCACTGTTCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: MFSYVSLCSATM*LCFPLTPTVLF Trigger: GAAGAGAACAGTGGGAGTCAAAGGGAAACAAAGTCACATGGTGGCGCTGCAGAGTGATACATAACTAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTAGCCACAGTACGGCTTaGCAGAGTTCCCTCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFSHSTA*QSSLCF Trigger: GAAGCAGAGGGAACTCTGCAAAGCCGTACTGTGGCT...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR TCA 72 bp | TATGAAAGATTCGCTTTAGCTGAGACAACTCTGGTGTaGGTTCATCCTCTTGGGTATTATATAGGAGGTCGA | + |
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Preference number: 3 (lower is better) Translates to: YERFALAETTLV*VHPLGYYIGGR Trigger: TCGACCTCCTATATAATACCCAAGAGGATGAACTCACACCAGAGTTGTCTCAGCTAAAGCGAATCTTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR TCA 72 bp | GTTACAGGTCCAGAATCAACTCTAAACCTGCTTCCATaGAGTCAAGTTTCTAGGTTGCCTTTGAGGTATTTC | + |
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Preference number: 3 (lower is better) Translates to: VTGPESTLNLLP*SQVSRLPLRYF Trigger: GAAATACCTCAAAGGCAACCTAGAAACTTGACTTCATGGAAGCAGGTTTAGAGTTGATTCTGGACCTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTCGGCCTGCTGCCATTTaGTGGAAGCCATTTAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFRPAAI*WKPFKS Trigger: ACTTTTAAATGGCTTCCACAAAATGGCAGCAGGCCG...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTGTCTCAATAAAGCCTTaGTACCAATGGCTGTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFVSIKP*YQWLWS Trigger: GCTCCACAGCCATTGGTACAAAGGCTTTATTGAGAC...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR TCA 72 bp | CAGACATTTTGGATATTGCTAAACTGCTTGACTGACTaGATCTTTAAAGAAACGTATTACGTCACCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: QTFWILLNCLTD*IFKETYYVTFP Trigger: TGGGAAGGTGACGTAATACGTTTCTTTAAAGATTCAGTCAGTCAAGCAGTTTAGCAATATCCAAAATGTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| 3UTR-3UTR CAA 90 bp | ATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATAAACAGCCAGACATTTaGGATATTGCTAAACTGCTT | + |
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Preference number: 3 (lower is better) Translates to: MMRLTPVFMMSPYVCSMYKQPDI*DIAKLL Trigger: AAGCAGTTTAGCAATATCCAAAATGTCTGGCTGTTT...ATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR TCA 90 bp | CTGCAGCGCCACCATGTGACTTTGTTTCCCTTTGACTCCCACTGTTCTCTTCCTTGCCGCTCTCGTTCCTaGTCTGCCTGCACGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LQRHHVTLFPFDSHCSLPCRSRS*SACTAF Trigger: GAAGGCCGTGCAGGCAGATCAGGAACGAGAGCGGCA...AGGAAGAGAACAGTGGGAGTCAAAGGGAAACAAAGTCACATGGTGGCGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | TGTGGGCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCGTAGCCTTGGGAAGTaGAGCCAGCTCCTTGACGGG | + |
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Preference number: 4 (lower is better) Translates to: CGPTWQNCLGRKNPRPFFRSLGK*SQLLDG Trigger: CCCGTCAAGGAGCTGGCTGCACTTCCCAAGGCTACG...GAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGCCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | CAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTGGTGCAGAGGGGCTaGTGGTGCAGCCCTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: QEISIKSRSQSELLPAGWLVQRG*WCSPVT Trigger: GGTGACAGGGCTGCACCAGCAGCCCCTCTGCACCAG...CCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CCA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGAGATGGTGTTCACGCTaGTGCAGAGGGGCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: AYMAELSGEEKSKAFLPVRWCSR*CRGAAG Trigger: ACCAGCAGCCCCTCTGCACCAGCGTGAACACCATCT...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | CTGCAGCGCCACCATGTGACTTTGTTTCCCTTTGACTCCCACTGTTCTCTTCCTTCTGCGGGTAGCTGCTaGAGCTTGTTCTTGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LQRHHVTLFPFDSHCSLPSAGSC*SLFLLR Trigger: CCTCAGCAAGAACAAGCTGCAGCAGCTACCCGCAGA...AGGAAGAGAACAGTGGGAGTCAAAGGGAAACAAAGTCACATGGTGGCGCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGTACAACCAGCCCTCCTaGTACACACAGCAGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AYMAELSGEEKSKAFLPVYNQPS*YTQQQE Trigger: CTCCTGCTGCTGTGTGTAGCAGGAGGGCTGGTTGTA...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGAAGTCTGCGGGTAGCTaGTGCAGCTTGTTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: AYMAELSGEEKSKAFLPVKSAGS*CSLFLL Trigger: CAGCAAGAACAAGCTGCAGCAGCTACCCGCAGACTT...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | CTGCAGCGCCACCATGTGACTTTGTTTCCCTTTGACTCCCACTGTTCTCTTCCTTTCGCTTCCTTAGCTTaGTGCTTGGCCTCACGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LQRHHVTLFPFDSHCSLPFASLA*CLASRF Trigger: GAAGCGTGAGGCCAAGCAGCAAGCTAAGGAAGCGAA...AGGAAGAGAACAGTGGGAGTCAAAGGGAAACAAAGTCACATGGTGGCGCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR TCA 90 bp | ATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTTGACGCAGCTTGTTCTTGCTaGGGTCCAGCTTTACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ISIKSRSQSELLPAGWLDAACSC*GPALPG Trigger: ACCTGGTAAAGCTGGACCTCAGCAAGAACAAGCTGC...GTCAAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | CAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTCTCGTTCCTGATCTaGCTGCACGGCCTTCATGTG | + |
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Preference number: 4 (lower is better) Translates to: QEISIKSRSQSELLPAGWLSFLI*LHGLHV Trigger: CACATGAAGGCCGTGCAGGCAGATCAGGAACGAGAG...CCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR TCA 90 bp | CAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGAGGAGATCCAAATGCTaGAGGTTAACCAGGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QEISIKSRSQSELLPAGWRRSKC*RLTRRP Trigger: TGGCCGCCTGGTTAACCTTCAGCATTTGGATCTCCT...CCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CCA 90 bp | ATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTTGACTTCGATTTCGGGGCCTaGTTTGCCTCTTTCTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: ISIKSRSQSELLPAGWLDFDFGA*FASFLG Trigger: GCCTAAGAAAGAGGCAAACCAGGCCCCGAAATCGAA...GTCAAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | CTGCAGCGCCACCATGTGACTTTGTTTCCCTTTGACTCCCACTGTTCTCTTCCTGAGTACTCAGTTTATTaGAGGACAGATCCAATACCG | + |
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Preference number: 4 (lower is better) Translates to: LQRHHVTLFPFDSHCSLPEYSVY*RTDPIP Trigger: CGGTATTGGATCTGTCCTGCAATAAACTGAGTACTC...AGGAAGAGAACAGTGGGAGTCAAAGGGAAACAAAGTCACATGGTGGCGCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | TGTGGGCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCACCTTGTTTGCACACTaGTTACATTGCTTCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: CGPTWQNCLGRKNPRPFFTLFAH*LHCFSS Trigger: GGATGAGAAGCAATGTAAGCAGTGTGCAAACAAGGT...GAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGCCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | ATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTCGGGGTGGTGGCTTaGGAGGACGAGAGCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: MMRLTPVFMMSPYVCSMYFGVVA*EDESQT Trigger: AGTCTGGCTCTCGTCCTCGCAAGCCACCACCCCGAA...ATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | ATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTGCTGGGAGTCGGTTTaGAGGACCCACTGGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: MMRLTPVFMMSPYVCSMYCWESV*RTHWRI Trigger: GATCCTCCAGTGGGTCCTGCAAACCGACTCCCAGCA...ATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR GCA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTTTTCGGGGCCTGGTTTaGCTCTTTCTTAGGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFFRGLV*LFLRLL Trigger: AAGAAGCCTAAGAAAGAGGCAAACCAGGCCCCGAAA...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS GCA 90 bp | GGGCTGCTGGTGCAGCCCTGTCACCCGGCATACAACCAGCCCTCCTaGTACACACAGCAGCAGGAGCAACAGCAACACCTTCAGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: GLLVQPCHPAYNQPS*YTQQQEQQQHLQHS Trigger: GCTGTGCTGAAGGTGTTGCTGTTGCTCCTGCTGCTGTGTGTAGCAGGAGGGCTGGTTGTATGCCGGGTGACAGGGCTGCACCAGCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | CTGCAGCGCCACCATGTGACTTTGTTTCCCTTTGACTCCCACTGTTCTCTTCCTTCCAATACCGTAGCCTaGGGAAGTGCAGCCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LQRHHVTLFPFDSHCSLPSNTVA*GSAASS Trigger: GGAGCTGGCTGCACTTCCCAAGGCTACGGTATTGGA...AGGAAGAGAACAGTGGGAGTCAAAGGGAAACAAAGTCACATGGTGGCGCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGGGTAGCTGCTGCAGCTaGTTCTTGCTGAGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: AYMAELSGEEKSKAFLPVGSCCS*FLLRSS Trigger: GCTGGACCTCAGCAAGAACAAGCTGCAGCAGCTACC...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | ATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTTGACTTTCGGGGTGGTGGCTaGCGAGGACGAGAGCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: ISIKSRSQSELLPAGWLDFRGGG*RGREPD Trigger: GTCTGGCTCTCGTCCTCGCAAGCCACCACCCCGAAA...GTCAAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | GCCTACATGGCAGAACTGTCTGGGGAGGAAAAATCCAAGGCCTTTCTTCCAGTGTCCTTAGCTTGCTGCTaGGCCTCACGCTTCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: AYMAELSGEEKSKAFLPVSLACC*ASRFFS Trigger: AGAGAAGAAGCGTGAGGCCAAGCAGCAAGCTAAGGA...CACTGGAAGAAAGGCCTTGGATTTTTCCTCCCCAGACAGTTCTGCCATGTAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | ATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTTGACTGCTGCAGCTTGTTCTaGCTGAGGTCCAGCTTTACC | + |
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Preference number: 5 (lower is better) Translates to: ISIKSRSQSELLPAGWLDCCSLF*LRSSFT Trigger: GGTAAAGCTGGACCTCAGCAAGAACAAGCTGCAGCA...GTCAAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | CAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGGCTGTAACACCTTGTTaGCACACTGCTTACATTGCT | + |
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Preference number: 5 (lower is better) Translates to: QEISIKSRSQSELLPAGWAVTPC*HTAYIA Trigger: AGCAATGTAAGCAGTGTGCAAACAAGGTGTTACAGC...CCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTCTGCTGGGAGTCGGTTaGCAGGACCCACTGGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFLLGVG*QDPLED Trigger: ATCCTCCAGTGGGTCCTGCAAACCGACTCCCAGCAG...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTCTTAGGCTTCTTCTCTaGCTCCCGCTTGGACGCCTT | + |
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Preference number: 5 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFLRLLL*LPLGRL Trigger: AAGGCGTCCAAGCGGGAGCAAGAGAAGAAGCCTAAG...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTAGCCACTTCAGATTCTaGAGCTGGGCAAAGCTGACA | + |
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Preference number: 5 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFSHFRF*SWAKLT Trigger: TGTCAGCTTTGCCCAGCTCAAGAATCTGAAGTGGCT...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | ATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATATGTGCTGTAACACCTaGTTTGCACACTGCTTACAT | + |
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Preference number: 5 (lower is better) Translates to: MMRLTPVFMMSPYVCSMYMCCNT*FAHCLH Trigger: ATGTAAGCAGTGTGCAAACAAGGTGTTACAGCACAT...ATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS-3UTR CAA 90 bp | ATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTTTAGAGTACTCAGTTTATaGCAGGACAGATCCAATACC | + |
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Preference number: 5 (lower is better) Translates to: MRLTPVFMMSPYVCSMYFRVLSL*QDRSNT Trigger: GGTATTGGATCTGTCCTGCAATAAACTGAGTACTCT...AAAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS CCA 72 bp | CAGCACAGCCCAGGAGCGAGTGTGTTTTCGGGGTGGTaGCTTGCGAGGACGAGAGCCAGACTTCGATTTCGG | + |
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Preference number: 6 (lower is better) Translates to: QHSPGASVFSGW*LARTRARLRFR Trigger: CCGAAATCGAAGTCTGGCTCTCGTCCTCGCAAGCCACCACCCCGAAAACACACTCGCTCCTGGGCTGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS GCA 72 bp | GTGCAGCCCTGTCACCCGGCATACAACCAGCCCTCCTaGTACACACAGCAGCAGGAGCAACAGCAACACCTT | + |
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Preference number: 6 (lower is better) Translates to: VQPCHPAYNQPS*YTQQQEQQQHL Trigger: AAGGTGTTGCTGTTGCTCCTGCTGCTGTGTGTAGCAGGAGGGCTGGTTGTATGCCGGGTGACAGGGCTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS CCA 72 bp | CTTCAGCACAGCCCAGGAGCGAGTGTGTTTTCGGGGTaGTGGCTTGCGAGGACGAGAGCCAGACTTCGATTT | + |
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Preference number: 6 (lower is better) Translates to: LQHSPGASVFSG*WLARTRARLRF Trigger: AAATCGAAGTCTGGCTCTCGTCCTCGCAAGCCACCACCCCGAAAACACACTCGCTCCTGGGCTGTGCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS GCA 72 bp | AGGTTAACCAGGCGGCCAAAGTCTGCGGGTAGCTGCTaGAGCTTGTTCTTGCTGAGGTCCAGCTTTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: RLTRRPKSAGSC*SLFLLRSSFTR Trigger: CCTGGTAAAGCTGGACCTCAGCAAGAACAAGCTGCAGCAGCTACCCGCAGACTTTGGCCGCCTGGTTAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS GCA 72 bp | AGGACGAGAGCCAGACTTCGATTTCGGGGCCTGGTTTaGCTCTTTCTTAGGCTTCTTCTCTTGCTCCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: RTRARLRFRGLV*LFLRLLLLLPL Trigger: AAGCGGGAGCAAGAGAAGAAGCCTAAGAAAGAGGCAAACCAGGCCCCGAAATCGAAGTCTGGCTCTCGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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| CDS CAA 72 bp | AGGCCACAGAAATCCGACGGAAGAGTACTCAGTTTATaGCAGGACAGATCCAATACCGTAGCCTTGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RPQKSDGRVLSL*QDRSNTVALGS Trigger: ACTTCCCAAGGCTACGGTATTGGATCTGTCCTGCAATAAACTGAGTACTCTTCCGTCGGATTTCTGTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021239.7 |
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