Pregenerated sensors for LRRC58 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034158Ensembl transcript IDs: ENSMUST00000078717.7
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAACGAGCGCAGCGGCATCGTCATCCATGGCGAACTGGGGGTGTaGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTA | + |
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Preference number: 1 (lower is better) Translates to: DNERSGIVIHGELGV*TGNGGAARRLCSRV Trigger: TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAGTTCGCCATGGATGACGATGCCGCTGCGCTCGTTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 90 bp | CCACCAGGTCAGGGAGGGACTCTCCAGAGCTGGGAAGAGCAAGGCTaGAGAAAGCCTACAGCTTGCTGGCTCCTGTATAAGGAGCGATGT | + |
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Preference number: 1 (lower is better) Translates to: PPGQGGTLQSWEEQG*RKPTACWLLYKERC Trigger: ACATCGCTCCTTATACAGGAGCCAGCAAGCTGTAGGCTTTCTTCAGCCTTGCTCTTCCCAGCTCTGGAGAGTCCCTCCCTGACCTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 90 bp | GGAGGTGGAGGACCCCTGGAATTGCCACCTGGAAGATCTCCCACCTaGTGGATCTCTGAGTTCCAGAGCAGCCCATTCTACAGAGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: GGGGPLELPPGRSPT*WISEFQSSPFYRVP Trigger: TGGAACTCTGTAGAATGGGCTGCTCTGGAACTCAGAGATCCACCAGGTGGGAGATCTTCCAGGTGGCAATTCCAGGGGTCCTCCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 90 bp | ACACCTGTAATCTCAGCAACTAGGGAGGTGGAGGACCCCTGGAATTaGCACCTGGAAGATCTCCCACCTGGTGGATCTCTGAGTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: TPVISATREVEDPWN*HLEDLPPGGSLSSR Trigger: TCTGGAACTCAGAGATCCACCAGGTGGGAGATCTTCCAGGTGGCAATTCCAGGGGTCCTCCACCTCCCTAGTTGCTGAGATTACAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 90 bp | ATGTCTTTATGCAACTCAGCTGTCCCAGGCGATCCCACTTCCGGCTaGTTACAGGCAAGCCTGTTCTTCAGAATGAACCATCCTGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: MSLCNSAVPGDPTSG*LQASLFFRMNHPVS Trigger: ACTAACAGGATGGTTCATTCTGAAGAACAGGCTTGCCTGTAATCAGCCGGAAGTGGGATCGCCTGGGACAGCTGAGTTGCATAAAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 90 bp | TCCGAGGGAAAGGTAAGGGGACTCACTATAGCAGCGTTTCACAACTaGAGCCACGAAACTCTTGTGTTTCATGGCGTGATACACACACAT | + |
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Preference number: 1 (lower is better) Translates to: SEGKVRGLTIAAFHN*SHETLVFHGVIHTH Trigger: ATGTGTGTGTATCACGCCATGAAACACAAGAGTTTCGTGGCTGCAGTTGTGAAACGCTGCTATAGTGAGTCCCCTTACCTTTCCCTCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 90 bp | TGGGAAGCTGAGACAAGAGTTACCATAAGAAGTTCAAGGCTAGCCTaGGCTACACAGCCAGGCCCTGTCTCAGAGAATAAAATAATGGCT | + |
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Preference number: 1 (lower is better) Translates to: WEAETRVTIRSSRLA*ATQPGPVSENKIMA Trigger: AGCCATTATTTTATTCTCTGAGACAGGGCCTGGCTGTGTAGCCCAGGCTAGCCTTGAACTTCTTATGGTAACTCTTGTCTCAGCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 90 bp | AAACATTTAAAGCAGGGTATGTGGTATTCCCAGCAGCTGGGAAGCTaGGACAAGAGTTACCATAAGAAGTTCAAGGCTAGCCTGGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: KHLKQGMWYSQQLGS*DKSYHKKFKASLGY Trigger: GTAGCCCAGGCTAGCCTTGAACTTCTTATGGTAACTCTTGTCTCAGCTTCCCAGCTGCTGGGAATACCACATACCCTGCTTTAAATGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 90 bp | CTCAAATTTACTATGAAGCCTAGTAACTTTGAAGTCCTGTTCTTCTaGCTCCACCTCCCAAGTGCTGGTCTGAAGGTGTGCACAACTATG | + |
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Preference number: 1 (lower is better) Translates to: LKFTMKPSNFEVLFF*LHLPSAGLKVCTTM Trigger: CATAGTTGTGCACACCTTCAGACCAGCACTTGGGAGGTGGAGGCAGAAGAACAGGACTTCAAAGTTACTAGGCTTCATAGTAAATTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 90 bp | AGACAGAATGCAAAACCTTTCTTTCACATCATGGCAGGTCTTACATaGACACTCAAGATGAAAACGCTCAGGTCTCCAATCAACTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: RQNAKPFFHIMAGLT*TLKMKTLRSPINFK Trigger: CTTGAAGTTGATTGGAGACCTGAGCGTTTTCATCTTGAGTGTCCATGTAAGACCTGCCATGATGTGAAAGAAAGGTTTTGCATTCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 90 bp | TGGATGAACATAACGGGCTCTGCTTCATGCTCATGTTTATGTAGTTaGAAGTCATGGTTTAGTAACAAAGAGGAACAAAGGAGACACACT | + |
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Preference number: 1 (lower is better) Translates to: WMNITGSASCSCLCS*KSWFSNKEEQRRHT Trigger: AGTGTGTCTCCTTTGTTCCTCTTTGTTACTAAACCATGACTTCCAACTACATAAACATGAGCATGAAGCAGAGCCCGTTATGTTCATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 90 bp | AATTCATTATTACTCTACAGGGCCTTACTGGCTCAGGGATTTGCCTaGGTACCTATGATTTCTCTTTCCCTACCCCATGTTGATTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: NSLLLYRALLAQGFA*VPMISLSLPHVDFK Trigger: TTTAAAATCAACATGGGGTAGGGAAAGAGAAATCATAGGTACCCAGGCAAATCCCTGAGCCAGTAAGGCCCTGTAGAGTAATAATGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTACAGCAACTAGGGAGGTaGAGGACCCCTGGAATTGCC | + |
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Preference number: 2 (lower is better) Translates to: LGVWTGNGGAARRLCSRVQQLGR*RTPGIA Trigger: GGCAATTCCAGGGGTCCTCCACCTCCCTAGTTGCTG...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTACACCTGGTGGATCTCTaGGTTCCAGAGCAGCCCATT | + |
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Preference number: 2 (lower is better) Translates to: LGVWTGNGGAARRLCSRVHLVDL*VPEQPI Trigger: AATGGGCTGCTCTGGAACTCAGAGATCCACCAGGTG...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CAA 90 bp | AAGGCTCATTTTATGTCTAGTGTTCAGCATAAACCAGGACAACCCTaGTACCAGAACTGTGATGATGTCTTTATGCAACTCAGCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KAHFMSSVQHKPGQP*YQNCDDVFMQLSCP Trigger: GGGACAGCTGAGTTGCATAAAGACATCATCACAGTTCTGGTACAAGGGTTGTCCTGGTTTATGCTGAACACTAGACATAAAATGAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CAA 90 bp | CCTCTGGCTGGATTATTTACAACTATAAAAGAAGAAACGATACACTaGCTTTCTGGGAGGCTAGGAAGGGTACATATGGTTAAATGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PLAGLFTTIKEETIH*LSGRLGRVHMVKCS Trigger: AGAGCATTTAACCATATGTACCCTTCCTAGCCTCCCAGAAAGCAAGTGTATCGTTTCTTCTTTTATAGTTGTAAATAATCCAGCCAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CAA 90 bp | ATAATATATACAAGAAACCTACACACAACTACTCTGAGCATACAGTaGGCTTCTAATAAAACACACTTGAAGAGACCACCTGATGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: IIYTRNLHTTTLSIQ*ASNKTHLKRPPDAL Trigger: TAGGGCATCAGGTGGTCTCTTCAAGTGTGTTTTATTAGAAGCCAACTGTATGCTCAGAGTAGTTGTGTGTAGGTTTCTTGTATATATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR-3UTR CCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGATGGCAGGTCTTACATaGACACTCAAGATGAAAACG | + |
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Preference number: 2 (lower is better) Translates to: IHNKLHSKNLNRELDSFLMAGLT*TLKMKT Trigger: CGTTTTCATCTTGAGTGTCCATGTAAGACCTGCCAT...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 72 bp | CGTTGTCGACAACGAGCGCAGCGGCATCGTCATCCATaGCGAACTGGGGGTGTGGACCGGCAACGGAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: RCRQRAQRHRHP*RTGGVDRQRRS Trigger: GCTCCTCCGTTGCCGGTCCACACCCCCAGTTCGCCATGGATGACGATGCCGCTGCGCTCGTTGTCGACAACG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 72 bp | ACAACGAGCGCAGCGGCATCGTCATCCATGGCGAACTaGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: TTSAAASSSMAN*GCGPATEELQE Trigger: TTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAGTTCGCCATGGATGACGATGCCGCTGCGCTCGTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTAAAACCAGGACAACCCTaGTACCAGAACTGTGATGAT | + |
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Preference number: 3 (lower is better) Translates to: LGVWTGNGGAARRLCSRVKPGQP*YQNCDD Trigger: ATCATCACAGTTCTGGTACAAGGGTTGTCCTGGTTT...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | ATCTCAGCAACTAGGGAGGTGGAGGACCCCTGGAATTaGCACCTGGAAGATCTCCCACCTGGTGGATCTCTG | + |
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Preference number: 3 (lower is better) Translates to: ISATREVEDPWN*HLEDLPPGGSL Trigger: CAGAGATCCACCAGGTGGGAGATCTTCCAGGTGGCAATTCCAGGGGTCCTCCACCTCCCTAGTTGCTGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 72 bp | CAGGGAGGGACTCTCCAGAGCTGGGAAGAGCAAGGCTaGAGAAAGCCTACAGCTTGCTGGCTCCTGTATAAG | + |
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Preference number: 3 (lower is better) Translates to: QGGTLQSWEEQG*RKPTACWLLYK Trigger: CTTATACAGGAGCCAGCAAGCTGTAGGCTTTCTTCAGCCTTGCTCTTCCCAGCTCTGGAGAGTCCCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 72 bp | ATTGCCACCTGGAAGATCTCCCACCTGGTGGATCTCTaGGTTCCAGAGCAGCCCATTCTACAGAGTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: IATWKISHLVDL*VPEQPILQSSR Trigger: CCTGGAACTCTGTAGAATGGGCTGCTCTGGAACTCAGAGATCCACCAGGTGGGAGATCTTCCAGGTGGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 72 bp | CTGGCACAGCATGATGAAGATTTCCTACATCTGTTGTaGGCAGAGGAACCTCTCAGGAGCAGTCTTTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LAQHDEDFLHLL*AEEPLRSSLSP Trigger: GGGAGAAAGACTGCTCCTGAGAGGTTCCTCTGCCCACAACAGATGTAGGAAATCTTCATCATGCTGTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | ACTATGAAGCCTAGTAACTTTGAAGTCCTGTTCTTCTaGCTCCACCTCCCAAGTGCTGGTCTGAAGGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: TMKPSNFEVLFF*LHLPSAGLKVC Trigger: GCACACCTTCAGACCAGCACTTGGGAGGTGGAGGCAGAAGAACAGGACTTCAAAGTTACTAGGCTTCATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 72 bp | AAGCAGGGTATGTGGTATTCCCAGCAGCTGGGAAGCTaGGACAAGAGTTACCATAAGAAGTTCAAGGCTAGC | + |
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Preference number: 3 (lower is better) Translates to: KQGMWYSQQLGS*DKSYHKKFKAS Trigger: GCTAGCCTTGAACTTCTTATGGTAACTCTTGTCTCAGCTTCCCAGCTGCTGGGAATACCACATACCCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 72 bp | TTACTCTACAGGGCCTTACTGGCTCAGGGATTTGCCTaGGTACCTATGATTTCTCTTTCCCTACCCCATGTT | + |
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Preference number: 3 (lower is better) Translates to: LLYRALLAQGFA*VPMISLSLPHV Trigger: AACATGGGGTAGGGAAAGAGAAATCATAGGTACCCAGGCAAATCCCTGAGCCAGTAAGGCCCTGTAGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | TTCTGCCTCCACCTCCCAAGTGCTGGTCTGAAGGTGTaGACAACTATGTCCAACTTTCACTCATTTATTCCA | + |
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Preference number: 3 (lower is better) Translates to: FCLHLPSAGLKV*TTMSNFHSFIP Trigger: TGGAATAAATGAGTGAAAGTTGGACATAGTTGTGCACACCTTCAGACCAGCACTTGGGAGGTGGAGGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | AAGGTAAGGGGACTCACTATAGCAGCGTTTCACAACTaGAGCCACGAAACTCTTGTGTTTCATGGCGTGATA | + |
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Preference number: 3 (lower is better) Translates to: KVRGLTIAAFHN*SHETLVFHGVI Trigger: TATCACGCCATGAAACACAAGAGTTTCGTGGCTGCAGTTGTGAAACGCTGCTATAGTGAGTCCCCTTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | ATTATTACTCTACAGGGCCTTACTGGCTCAGGGATTTaGCTGGGTACCTATGATTTCTCTTTCCCTACCCCA | + |
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Preference number: 3 (lower is better) Translates to: IITLQGLTGSGI*LGTYDFSFPTP Trigger: TGGGGTAGGGAAAGAGAAATCATAGGTACCCAGGCAAATCCCTGAGCCAGTAAGGCCCTGTAGAGTAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | ACCATCCTCGTACACAAAACCAACCAACTTAGCTACTaGTCCAATGCCAGCAAACAGCAATGCCAACTCATC | + |
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Preference number: 3 (lower is better) Translates to: TILVHKTNQLSY*SNASKQQCQLI Trigger: GATGAGTTGGCATTGCTGTTTGCTGGCATTGGAGCAGTAGCTAAGTTGGTTGGTTTTGTGTACGAGGATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 72 bp | TTCACATCATGGCAGGTCTTACATGGACACTCAAGATaGAAACGCTCAGGTCTCCAATCAACTTCAAGACCC | + |
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Preference number: 3 (lower is better) Translates to: FTSWQVLHGHSR*KRSGLQSTSRP Trigger: GGGTCTTGAAGTTGATTGGAGACCTGAGCGTTTTCATCTTGAGTGTCCATGTAAGACCTGCCATGATGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 72 bp | GCAAAACCTTTCTTTCACATCATGGCAGGTCTTACATaGACACTCAAGATGAAAACGCTCAGGTCTCCAATC | + |
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Preference number: 3 (lower is better) Translates to: AKPFFHIMAGLT*TLKMKTLRSPI Trigger: GATTGGAGACCTGAGCGTTTTCATCTTGAGTGTCCATGTAAGACCTGCCATGATGTGAAAGAAAGGTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 72 bp | CTTCCGGCTGATTACAGGCAAGCCTGTTCTTCAGAATaGACCATCCTGTTAGTGTTTCTTCAAAGACTTACA | + |
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Preference number: 3 (lower is better) Translates to: LPADYRQACSSE*TILLVFLQRLT Trigger: TGTAAGTCTTTGAAGAAACACTAACAGGATGGTTCATTCTGAAGAACAGGCTTGCCTGTAATCAGCCGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | ACTCTACTGTGGATGAACATAACGGGCTCTGCTTCATaGTCATGTTTATGTAGTTGGAAGTCATGGTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: TLLWMNITGSAS*SCLCSWKSWFS Trigger: ACTAAACCATGACTTCCAACTACATAAACATGAGCATGAAGCAGAGCCCGTTATGTTCATCCACAGTAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 72 bp | ATAACGGGCTCTGCTTCATGCTCATGTTTATGTAGTTaGAAGTCATGGTTTAGTAACAAAGAGGAACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: ITGSASCSCLCS*KSWFSNKEEQR Trigger: CCTTTGTTCCTCTTTGTTACTAAACCATGACTTCCAACTACATAAACATGAGCATGAAGCAGAGCCCGTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 72 bp | TTACCATATACTTTCTTTCCCACACTAAGGGCTAAATaGAAGATCACAAAGGACACGATACCTACGGTACTA | + |
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Preference number: 3 (lower is better) Translates to: LPYTFFPTLRAK*KITKDTIPTVL Trigger: TAGTACCGTAGGTATCGTGTCCTTTGTGATCTTCCATTTAGCCCTTAGTGTGGGAAAGAAAGTATATGGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR CCA 72 bp | CCCAACCTTGCAATCTGCAGCTTACAGATGCTTACTTaGCGAAATAAACAAAGACTTTATATGTTCTATCAT | + |
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Preference number: 3 (lower is better) Translates to: PNLAICSLQMLT*RNKQRLYMFYH Trigger: ATGATAGAACATATAAAGTCTTTGTTTATTTCGCCAAGTAAGCATCTGTAAGCTGCAGATTGCAAGGTTGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | TTTCTCCCTCAAGTCAAATACGCATCATATAGCTATTaGCAACAATTTACCATATACTTTCTTTCCCACACT | + |
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Preference number: 3 (lower is better) Translates to: FLPQVKYASYSY*QQFTIYFLSHT Trigger: AGTGTGGGAAAGAAAGTATATGGTAAATTGTTGGCAATAGCTATATGATGCGTATTTGACTTGAGGGAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR TCA 72 bp | ATAGCCTTCATTAAGCCACTAAATTCAATACATACATaGGACTGCATATTATGTCACTCATTGAGACTGACT | + |
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Preference number: 3 (lower is better) Translates to: IAFIKPLNSIHT*DCILCHSLRLT Trigger: AGTCAGTCTCAATGAGTGACATAATATGCAGTCTCATGTATGTATTGAATTTAGTGGCTTAATGAAGGCTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| 3UTR GCA 72 bp | TGCCTTCTAAATGTTCAACTCTGTGAGTTAGTGGAATaGTTACTTCAATCCTTTGTAAATACAGATCACAAA | + |
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Preference number: 3 (lower is better) Translates to: CLLNVQLCELVE*LLQSFVNTDHK Trigger: TTTGTGATCTGTATTTACAAAGGATTGAAGTAAGCATTCCACTAACTCACAGAGTTGAACATTTAGAAGGCA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR GCA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTATCCAGGAGCTGGAGGTaGGGGAAGCCGCCGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LGVWTGNGGAARRLCSRVSRSWR*GKPPPN Trigger: GTTGGGCGGCGGCTTCCCGCACCTCCAGCTCCTGGA...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR CCA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTACGAGCCGGTTGTTCCTaGCCAGCAGCGTGCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LGVWTGNGGAARRLCSRVRAGCS*PAACAG Trigger: GCCTGCGCACGCTGCTGGCCAGGAACAACCGGCTCG...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR TCA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTAACTGGCTTCATCTTCTaGGTCAGATTCACTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LGVWTGNGGAARRLCSRVTGFIF*VRFTLG Trigger: TCCCAGAGTGAATCTGACTCAGAAGATGAAGCCAGT...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR CCA 90 bp | ACAGGGAACTGGACTCATTCCTGCCGAATGTGTAGACAGAATGCAAAACCTTTCCGGCAGAGCGGCGACTaGGCCAGGCCCTTGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TGNWTHSCRMCRQNAKPFRQSGD*ARPLGS Trigger: GCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCG...GAAAGGTTTTGCATTCTGTCTACACATTCGGCAGGAATGAGTCCAGTTCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR GCA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTATTTCTGCATTCTGTGTaGAGCAACACTGGCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: LGVWTGNGGAARRLCSRVFLHSV*SNTGFI Trigger: GATGAAGCCAGTGTTGCTGCACACAGAATGCAGAAA...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR TCA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTACTCAGCTCTTCCAGGTaGATAAGATTAAGGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: LGVWTGNGGAARRLCSRVLSSSR*IRLRIS Trigger: AGAGATCCTTAATCTTATTCACCTGGAAGAGCTGAG...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR TCA 90 bp | ACGCTCAGGTCTCCAATCAACTTCAAGACCCATTTCCTTTTAGTCATTTCTGTTCGGGCCCCAGCGCCGTaGGCGAGTTGCCGCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TLRSPINFKTHFLLVISVRAPAP*ASCRSR Trigger: ACGTGAGCGGCAACTCGCTCACGGCGCTGGGGCCCG...AACAGAAATGACTAAAAGGAAATGGGTCTTGAAGTTGATTGGAGACCTGAGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| 3UTR CAA 72 bp | CATTACAAGCGACCTGTGCCAGGCATGAACTGTAGCTaGCCTAACACGCACCAGGCTCTGTACCTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HYKRPVPGMNCS*PNTHQALYLSP Trigger: TGGGGATAGGTACAGAGCCTGGTGCGTGTTAGGCAAGCTACAGTTCATGCCTGGCACAGGTCGCTTGTAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR TCA 90 bp | ACGCTCAGGTCTCCAATCAACTTCAAGACCCATTTCCTTTTAGTCATTTCTGTTCCCAGGCTGAGGGTCTaGAGGGCGCGCAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRSPINFKTHFLLVISVPRLRV*RARSSS Trigger: GCTGGAGCTGCGCGCCCTTCAGACCCTCAGCCTGGG...AACAGAAATGACTAAAAGGAAATGGGTCTTGAAGTTGATTGGAGACCTGAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAACTGGACTCATTCCTGCCGAATGTGTAGACAGAATGCAAAACCTTTCCTGAGGTTGAGCACTTaGAGGCTGCGGCAGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGNWTHSCRMCRQNAKPFLRLST*RLRQSG Trigger: GCCGCTCTGCCGCAGCCTCCAAGTGCTCAACCTCAG...GAAAGGTTTTGCATTCTGTCTACACATTCGGCAGGAATGAGTCCAGTTCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CCA 90 bp | ACGCTCAGGTCTCCAATCAACTTCAAGACCCATTTCCTTTTAGTCATTTCTGTTGGGATGCTCTGCAGCTaGTTGCCGCCCAGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRSPINFKTHFLLVISVGMLCS*LPPRLR Trigger: CCTCAGCCTGGGCGGCAACCAGCTGCAGAGCATCCC...AACAGAAATGACTAAAAGGAAATGGGTCTTGAAGTTGATTGGAGACCTGAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR TCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGGGTTGCCGCCCAGGCTaGGGGTCTGAAGGGCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLGCRPG*GSEGRA Trigger: TGCGCGCCCTTCAGACCCTCAGCCTGGGCGGCAACC...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAACTGGACTCATTCCTGCCGAATGTGTAGACAGAATGCAAAACCTTTCATTCACTCTGGGAGGTaGAGCTATGGGAGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGNWTHSCRMCRQNAKPFIHSGR*SYGRQS Trigger: GCTCTGCCTCCCATAGCTCCACCTCCCAGAGTGAAT...GAAAGGTTTTGCATTCTGTCTACACATTCGGCAGGAATGAGTCCAGTTCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR GCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGTCCTGGCCAGCAGCGTaGGCAGGCCGCTCAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLSWPAA*AGRSAS Trigger: TGACGCTGAGCGGCCTGCGCACGCTGCTGGCCAGGA...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR GCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGTCGGCGGGGATGCTCTaGAGCTGGTTGCCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLSAGML*SWLPPR Trigger: CCTGGGCGGCAACCAGCTGCAGAGCATCCCCGCCGA...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGCTCACGTCCAGGAGCTaGAGGTGCGGGAAGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLLTSRS*RCGKPP Trigger: CGGCGGCTTCCCGCACCTCCAGCTCCTGGACGTGAG...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAACTGGACTCATTCCTGCCGAATGTGTAGACAGAATGCAAAACCTTTCGAGTCAGATTCACTCTaGGAGGTGGAGCTATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGNWTHSCRMCRQNAKPFESDSL*EVELWE Trigger: CTCCCATAGCTCCACCTCCCAGAGTGAATCTGACTC...GAAAGGTTTTGCATTCTGTCTACACATTCGGCAGGAATGAGTCCAGTTCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| 3UTR CAA 72 bp | TTCCTGGCACAGCATGATGAAGATTTCCTACATCTGTaGTGGGCAGAGGAACCTCTCAGGAGCAGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLAQHDEDFLHL*WAEEPLRSSLS Trigger: AGAAAGACTGCTCCTGAGAGGTTCCTCTGCCCACAACAGATGTAGGAAATCTTCATCATGCTGTGCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGGAGGCGGGCAGCTCCTaGAAGCAGTTGCCGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLEAGSS*KQLPLR Trigger: CCTCAGCGGCAACTGCTTCCAGGAGCTGCCCGCCTC...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR GCA 90 bp | ACAGGGAACTGGACTCATTCCTGCCGAATGTGTAGACAGAATGCAAAACCTTTCCCAAGAAGGACTTTCTaGATTCTGTGTGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TGNWTHSCRMCRQNAKPFPRRTF*ILCAAT Trigger: TGTTGCTGCACACAGAATGCAGAAAGTCCTTCTTGG...GAAAGGTTTTGCATTCTGTCTACACATTCGGCAGGAATGAGTCCAGTTCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR TCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGAAGCGAATGCAACTGTaGGAGCTGGGGAGGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLKRMQL*ELGRHT Trigger: AGTGTGCCTCCCCAGCTCTCACAGTTGCATTCGCTT...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR GCA 90 bp | ACGCTCAGGTCTCCAATCAACTTCAAGACCCATTTCCTTTTAGTCATTTCTGTTTTGGGTTTGGACAGTTaGTGGCTGAACCCAAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TLRSPINFKTHFLLVISVLGLDS*WLNPSI Trigger: GATACTTGGGTTCAGCCAGCAACTGTCCAAACCCAA...AACAGAAATGACTAAAAGGAAATGGGTCTTGAAGTTGATTGGAGACCTGAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGGACTCCACCACACTTTaGGTTTGGACAGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLDSTTL*VWTVAG Trigger: GCCAGCAACTGTCCAAACCCAAAGTGTGGTGGAGTC...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| 3UTR CAA 72 bp | CAAAGCATTTACAAGTCATCTTTGCTTTTCCCAACCTaGCAATCTGCAGCTTACAGATGCTTACTTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSIYKSSLLFPT*QSAAYRCLLGE Trigger: TTCGCCAAGTAAGCATCTGTAAGCTGCAGATTGCAAGGTTGGGAAAAGCAAAGATGACTTGTAAATGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR TCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGTGGACAGTTGCTGGCTaGACCCAAGTATCTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLWTVAG*TQVSKK Trigger: CTTCTTAGATACTTGGGTTCAGCCAGCAACTGTCCA...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR GCA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGGTCAGCAAGTTATTGTaGAGACTGAGGGATCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHNKLHSKNLNRELDSFLVSKLL*RLRDRS Trigger: GCTTCGATCCCTCAGTCTGCACAATAACTTGCTGAC...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| 3UTR CAA 72 bp | TTTATGTCTAGTGTTCAGCATAAACCAGGACAACCCTaGTACCAGAACTGTGATGATGTCTTTATGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FMSSVQHKPGQP*YQNCDDVFMQL Trigger: GAGTTGCATAAAGACATCATCACAGTTCTGGTACAAGGGTTGTCCTGGTTTATGCTGAACACTAGACATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| 3UTR CAA 72 bp | ACTCTGAGCATACAGTTGGCTTCTAATAAAACACACTaGAAGAGACCACCTGATGCCCTAATACAATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSIQLASNKTH*KRPPDALIQCE Trigger: TTCACATTGTATTAGGGCATCAGGTGGTCTCTTCAAGTGTGTTTTATTAGAAGCCAACTGTATGCTCAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| 3UTR CAA 72 bp | ACAAGAAACCTACACACAACTACTCTGAGCATACAGTaGGCTTCTAATAAAACACACTTGAAGAGACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TRNLHTTTLSIQ*ASNKTHLKRPP Trigger: AGGTGGTCTCTTCAAGTGTGTTTTATTAGAAGCCAACTGTATGCTCAGAGTAGTTGTGTGTAGGTTTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| 3UTR CAA 72 bp | TTTGTTTCATCTAACATTCCAGCCAACAGCCTCTTCTaGATTCTTCATTTAAACCCAATATTTCAGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVSSNIPANSLF*ILHLNPIFQRL Trigger: GAGACGCTGAAATATTGGGTTTAAATGAAGAATCAAGAAGAGGCTGTTGGCTGGAATGTTAGATGAAACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS CCA 90 bp | CCAGGCCCTTGGGCAGCGAGCCCGGGCCGCCGAGCCGGTTGTTCCTaGCCAGCAGCGTGCGCAGGCCGCTCAGCGTCAGCAGCTCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGPWAASPGRRAGCS*PAACAGRSASAARA Trigger: GGCCCGAGCTGCTGACGCTGAGCGGCCTGCGCACGCTGCTGGCCAGGAACAACCGGCTCGGCGGCCCGGGCTCGCTGCCCAAGGGCCTGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS GCA 90 bp | CCCAGCGCCGTGAGCGAGTTGCCGCTCACGTCCAGGAGCTGGAGGTaGGGGAAGCCGCCGCCCAACGCCCGCGGCAGCGACGTCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSAVSELPLTSRSWR*GKPPPNARGSDVRR Trigger: CCGCCTGACGTCGCTGCCGCGGGCGTTGGGCGGCGGCTTCCCGCACCTCCAGCTCCTGGACGTGAGCGGCAACTCGCTCACGGCGCTGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS TCA 90 bp | GCGTGCGCAGGCCGCTCAGCGTCAGCAGCTCGGGCCCCAGCGCCGTaGGCGAGTTGCCGCTCACGTCCAGGAGCTGGAGGTGCGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ACAGRSASAARAPAP*ASCRSRPGAGGAGS Trigger: GCTTCCCGCACCTCCAGCTCCTGGACGTGAGCGGCAACTCGCTCACGGCGCTGGGGCCCGAGCTGCTGACGCTGAGCGGCCTGCGCACGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS CCA 90 bp | TTGCCGCTGAGGTTGAGCACTTGGAGGCTGCGGCAGAGCGGCGACTaGGCCAGGCCCTTGGGCAGCGAGCCCGGGCCGCCGAGCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPLRLSTWRLRQSGD*ARPLGSEPGPPSRL Trigger: CAACCGGCTCGGCGGCCCGGGCTCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCCAAGTGCTCAACCTCAGCGGCAA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS TCA 90 bp | TCTCGATCTCGGCGGGGATGCTCTGCAGCTGGTTGCCGCCCAGGCTaGGGGTCTGAAGGGCGCGCAGCTCCAGCAGCGAGGCGGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSRRGCSAAGCRPG*GSEGRAAPAARRAA Trigger: AGCTGCCCGCCTCGCTGCTGGAGCTGCGCGCCCTTCAGACCCTCAGCCTGGGCGGCAACCAGCTGCAGAGCATCCCCGCCGAGATCGAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR CAA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTACTGAGGCGGGACCAGTaGAGTTCGGCCTCCCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGVWTGNGGAARRLCSRVLRRDQ*SSASPS Trigger: GCTCGGGGAGGCCGAACTCAACTGGTCCCGCCTCAG...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR CAA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTAGCTGAGGTTGAGCACTaGGAGGCTGCGGCAGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVWTGNGGAARRLCSRVAEVEH*EAAAER Trigger: CCGCTCTGCCGCAGCCTCCAAGTGCTCAACCTCAGC...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS-3UTR CAA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTAATGCTCTGCAGCTGGTaGCCGCCCAGGCTGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVWTGNGGAARRLCSRVMLCSW*PPRLRV Trigger: GACCCTCAGCCTGGGCGGCAACCAGCTGCAGAGCAT...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CAA 90 bp | ACAGGGAACTGGACTCATTCCTGCCGAATGTGTAGACAGAATGCAAAACCTTTCGGGCCGCCGAGCCGGTaGTTCCTGGCCAGCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGNWTHSCRMCRQNAKPFGPPSR*FLASSV Trigger: CACGCTGCTGGCCAGGAACAACCGGCTCGGCGGCCC...GAAAGGTTTTGCATTCTGTCTACACATTCGGCAGGAATGAGTCCAGTTCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGTGTGGACCGGCAACGGAGGAGCTGCAAGAAGGCTGTGCTCTCGGGTATTTGGGTTTGGACAGTaGCTGGCTGAACCCAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGVWTGNGGAARRLCSRVFGFGQ*LAEPKY Trigger: ATACTTGGGTTCAGCCAGCAACTGTCCAAACCCAAA...TACCCGAGAGCACAGCCTTCTTGCAGCTCCTCCGTTGCCGGTCCACACCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CAA 90 bp | ACAGGGAACTGGACTCATTCCTGCCGAATGTGTAGACAGAATGCAAAACCTTTCAGCGCCGTGAGCGAGTaGCCGCTCACGTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGNWTHSCRMCRQNAKPFSAVSE*PLTSRS Trigger: GCTCCTGGACGTGAGCGGCAACTCGCTCACGGCGCT...GAAAGGTTTTGCATTCTGTCTACACATTCGGCAGGAATGAGTCCAGTTCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CAA 90 bp | ACAGGGAACTGGACTCATTCCTGCCGAATGTGTAGACAGAATGCAAAACCTTTCAGCTCCTGGAAGCAGTaGCCGCTGAGGTTGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TGNWTHSCRMCRQNAKPFSSWKQ*PLRLST Trigger: AGTGCTCAACCTCAGCGGCAACTGCTTCCAGGAGCT...GAAAGGTTTTGCATTCTGTCTACACATTCGGCAGGAATGAGTCCAGTTCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CAA 90 bp | ACGCTCAGGTCTCCAATCAACTTCAAGACCCATTTCCTTTTAGTCATTTCTGTTCAGTTGCCGCTGAGGTaGAGCACTTGGAGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLRSPINFKTHFLLVISVQLPLR*STWRLR Trigger: CCGCAGCCTCCAAGTGCTCAACCTCAGCGGCAACTG...AACAGAAATGACTAAAAGGAAATGGGTCTTGAAGTTGATTGGAGACCTGAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CAA 90 bp | ACGCTCAGGTCTCCAATCAACTTCAAGACCCATTTCCTTTTAGTCATTTCTGTTGGCACACTTTGGATCTaGTTGTCACACAACACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLRSPINFKTHFLLVISVGTLWI*LSHNTK Trigger: CTTGGTGTTGTGTGACAACAAGATCCAAAGTGTGCC...AACAGAAATGACTAAAAGGAAATGGGTCTTGAAGTTGATTGGAGACCTGAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS-3UTR CAA 90 bp | ATTCACAATAAATTACACTCAAAGAATCTAAACAGGGAACTGGACTCATTCCTGCACCACACTTTGGGTTaGGACAGTTGCTGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IHNKLHSKNLNRELDSFLHHTLG*DSCWLN Trigger: GTTCAGCCAGCAACTGTCCAAACCCAAAGTGTGGTG...CAGGAATGAGTCCAGTTCCCTGTTTAGATTCTTTGAGTGTAATTTATTGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS CAA 90 bp | GACTGGGCCAGGCCCTTGGGCAGCGAGCCCGGGCCGCCGAGCCGGTaGTTCCTGGCCAGCAGCGTGCGCAGGCCGCTCAGCGTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DWARPLGSEPGPPSR*FLASSVRRPLSVSS Trigger: GCTGCTGACGCTGAGCGGCCTGCGCACGCTGCTGGCCAGGAACAACCGGCTCGGCGGCCCGGGCTCGCTGCCCAAGGGCCTGGCCCAGTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS GCA 72 bp | CCGGGCCGCCGAGCCGGTTGTTCCTGGCCAGCAGCGTaGGCAGGCCGCTCAGCGTCAGCAGCTCGGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGRRAGCSWPAA*AGRSASAARAP Trigger: TGGGGCCCGAGCTGCTGACGCTGAGCGGCCTGCGCACGCTGCTGGCCAGGAACAACCGGCTCGGCGGCCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS CAA 72 bp | AGGCCCTTGGGCAGCGAGCCCGGGCCGCCGAGCCGGTaGTTCCTGGCCAGCAGCGTGCGCAGGCCGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPLGSEPGPPSR*FLASSVRRPLS Trigger: GCTGAGCGGCCTGCGCACGCTGCTGGCCAGGAACAACCGGCTCGGCGGCCCGGGCTCGCTGCCCAAGGGCCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS CAA 72 bp | TGGAGGCTGCGGCAGAGCGGCGACTGGGCCAGGCCCTaGGGCAGCGAGCCCGGGCCGCCGAGCCGGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WRLRQSGDWARP*GSEPGPPSRLF Trigger: GAACAACCGGCTCGGCGGCCCGGGCTCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS CCA 72 bp | TGGGCAGCGAGCCCGGGCCGCCGAGCCGGTTGTTCCTaGCCAGCAGCGTGCGCAGGCCGCTCAGCGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: WAASPGRRAGCS*PAACAGRSASA Trigger: TGCTGACGCTGAGCGGCCTGCGCACGCTGCTGGCCAGGAACAACCGGCTCGGCGGCCCGGGCTCGCTGCCCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS CCA 72 bp | AGGTTGAGCACTTGGAGGCTGCGGCAGAGCGGCGACTaGGCCAGGCCCTTGGGCAGCGAGCCCGGGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RLSTWRLRQSGD*ARPLGSEPGPP Trigger: CGGCGGCCCGGGCTCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCCAAGTGCTCAACCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS CAA 90 bp | AGGCCGCTCAGCGTCAGCAGCTCGGGCCCCAGCGCCGTGAGCGAGTaGCCGCTCACGTCCAGGAGCTGGAGGTGCGGGAAGCCGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPLSVSSSGPSAVSE*PLTSRSWRCGKPPP Trigger: GGGCGGCGGCTTCCCGCACCTCCAGCTCCTGGACGTGAGCGGCAACTCGCTCACGGCGCTGGGGCCCGAGCTGCTGACGCTGAGCGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS CAA 90 bp | TTGAGCACTTGGAGGCTGCGGCAGAGCGGCGACTGGGCCAGGCCCTaGGGCAGCGAGCCCGGGCCGCCGAGCCGGTTGTTCCTGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSTWRLRQSGDWARP*GSEPGPPSRLFLAS Trigger: GCTGGCCAGGAACAACCGGCTCGGCGGCCCGGGCTCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCCAAGTGCTCAA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
||
| CDS TCA 72 bp | GGCCGCTCAGCGTCAGCAGCTCGGGCCCCAGCGCCGTaGGCGAGTTGCCGCTCACGTCCAGGAGCTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: GRSASAARAPAP*ASCRSRPGAGG Trigger: ACCTCCAGCTCCTGGACGTGAGCGGCAACTCGCTCACGGCGCTGGGGCCCGAGCTGCTGACGCTGAGCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS TCA 72 bp | CGGCGGGGATGCTCTGCAGCTGGTTGCCGCCCAGGCTaGGGGTCTGAAGGGCGCGCAGCTCCAGCAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: RRGCSAAGCRPG*GSEGRAAPAAR Trigger: CCTCGCTGCTGGAGCTGCGCGCCCTTCAGACCCTCAGCCTGGGCGGCAACCAGCTGCAGAGCATCCCCGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS CAA 72 bp | CAGCTCCTGGAAGCAGTTGCCGCTGAGGTTGAGCACTaGGAGGCTGCGGCAGAGCGGCGACTGGGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QLLEAVAAEVEH*EAAAERRLGQA Trigger: GGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCCAAGTGCTCAACCTCAGCGGCAACTGCTTCCAGGAGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS TCA 72 bp | CTCGAGGCAGGTAAGTCAGCAAGTTATTGTGCAGACTaGGGGATCGAAGCGAATGCAACTGTGAGAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LEAGKSASYCAD*GIEANATVRAG Trigger: CCCAGCTCTCACAGTTGCATTCGCTTCGATCCCTCAGTCTGCACAATAACTTGCTGACTTACCTGCCTCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS GCA 72 bp | AGCAAGTTATTGTGCAGACTGAGGGATCGAAGCGAATaGAACTGTGAGAGCTGGGGAGGCACACTTTGGATC | + |
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Preference number: 6 (lower is better) Translates to: SKLLCRLRDRSE*NCESWGGTLWI Trigger: GATCCAAAGTGTGCCTCCCCAGCTCTCACAGTTGCATTCGCTTCGATCCCTCAGTCTGCACAATAACTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS CCA 72 bp | AGACTGAGGGATCGAAGCGAATGCAACTGTGAGAGCTaGGGAGGCACACTTTGGATCTTGTTGTCACACAAC | + |
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Preference number: 6 (lower is better) Translates to: RLRDRSECNCES*GGTLWILLSHN Trigger: GTTGTGTGACAACAAGATCCAAAGTGTGCCTCCCCAGCTCTCACAGTTGCATTCGCTTCGATCCCTCAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS CAA 90 bp | CATGAGGGGGAGACGGTACTTCCCACAGAAGTCCACAAACTTAATTaGTCTGACACAACAGTCAAAATAGACTCCACCACACTTTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: HEGETVLPTEVHKLN*SDTTVKIDSTTLWV Trigger: AACCCAAAGTGTGGTGGAGTCTATTTTGACTGTTGTGTCAGACAAATTAAGTTTGTGGACTTCTGTGGGAAGTACCGTCTCCCCCTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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| CDS CAA 72 bp | GAGACGGTACTTCCCACAGAAGTCCACAAACTTAATTaGTCTGACACAACAGTCAAAATAGACTCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: ETVLPTEVHKLN*SDTTVKIDSTT Trigger: TGTGGTGGAGTCTATTTTGACTGTTGTGTCAGACAAATTAAGTTTGTGGACTTCTGTGGGAAGTACCGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078717.7 |
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