Pregenerated sensors for LRRC57 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027286Ensembl transcript IDs: ENSMUST00000102496.8, ENSMUST00000102497.10, ENSMUST00000102498.8, ENSMUST00000102499.8, ENSMUST00000133612.2, ENSMUST00000135465.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTaGTCCTTTGACAAAGGTCTCTTCAAGACAGCTACATATTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: CYCSLGEHSRWLLCW*SFDKGLFKTATYLG Trigger: ACCTAAATATGTAGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR TCA 90 bp | CAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTaGCAAAGGTCTCTTCAAGACAGCTACATATTTAGGTACATCCTA | + |
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Preference number: 1 (lower is better) Translates to: QPWGTFSVAVVLVLL*QRSLQDSYIFRYIL Trigger: TAGGATGTACCTAAATATGTAGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR CCA 90 bp | ATTTGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTaGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGCTACATATTTA | + |
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Preference number: 1 (lower is better) Translates to: ICYCSLGEHSRWLLC*CSFDKGLFKTATYL Trigger: TAAATATGTAGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR TCA 90 bp | TACATATTTAGGTACATCCTAAGTTCCAAGTGTAAACACTGCTATTaGGTTAGTGTACAGGAACAAACACATTCATCCTTAGTCATACGT | + |
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Preference number: 1 (lower is better) Translates to: YIFRYILSSKCKHCY*VSVQEQTHSSLVIR Trigger: ACGTATGACTAAGGATGAATGTGTTTGTTCCTGTACACTAACTCAATAGCAGTGTTTACACTTGGAACTTAGGATGTACCTAAATATGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATTTGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCCTACACGGCTCAAGATaGAGGGTTCTTCCTGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KICYCSLGEHSRWLLCWCLHGSR*RVLPVS Trigger: GGAGACAGGAAGAACCCTTCATCTTGAGCCGTGTAG...GCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCAAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | TTCGCAAACTCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACTACACGGCTCAAGATaGAGGGTTCTTCCTGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: FANSKSPAMASSISSLHELHGSR*RVLPVS Trigger: GGAGACAGGAAGAACCCTTCATCTTGAGCCGTGTAG...TTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGAGTTTGCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATTTGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCCATTTCCTCCCTTCATaGACAGCAGGTTCCTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KICYCSLGEHSRWLLCWCHFLPS*TAGSLE Trigger: CTCTAAGGAACCTGCTGTTCATGAAGGGAGGAAATG...GCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCAAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGATGGGAAAGACTTTATaGAAGCTGACAGTTCGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AALGNILGGCCVGAPLTKMGKTL*KLTVRK Trigger: TTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCAT...CTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTATTAACACAGAGGTaGTGGGAAAGACTTTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: AALGNILGGCCVGAPLTKVLTQR*WERLYE Trigger: TTCATAAAGTCTTTCCCATCACCTCTGTGTTAATAC...CTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGCTATGGGAAAGACTTTATaGAAGCTGACAGTTCGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SRWLLCWCSFDKGLFKTAMGKTL*KLTVRK Trigger: TTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCAT...AGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTACTACACGGCTCAAGATaGAGGGTTCTTCCTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: HIVLALSEPSTNKAPAIVLHGSR*RVLPVS Trigger: GGAGACAGGAAGAACCCTTCATCTTGAGCCGTGTAG...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGATGGGAAAGACTTTATaGAAGCTGACAGTTCGCAAA | + |
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Preference number: 2 (lower is better) Translates to: ILGGCCVGAPLTKVSSRQMGKTL*KLTVRK Trigger: TTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCAT...CTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATTTGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCGTATTAACACAGAGGTaGTGGGAAAGACTTTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: KICYCSLGEHSRWLLCWCVLTQR*WERLYE Trigger: TTCATAAAGTCTTTCCCATCACCTCTGTGTTAATAC...GCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCAAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTTTCCTTCAGCTTATCTaGCATAGTCCTAAAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SKSPAMASSISSLHEQQVFLQLI*HSPKKE Trigger: TTCCTTTTTAGGACTATGTCAGATAAGCTGAAGGAA...AACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTACATTTCCTCCCTTCATaGACAGCAGGTTCCTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HIVLALSEPSTNKAPAIVHFLPS*TAGSLE Trigger: CTCTAAGGAACCTGCTGTTCATGAAGGGAGGAAATG...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR GCA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTATGGCTGTTGTGTTGGTaGTCCTTTGACAAAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: HIVLALSEPSTNKAPAIVWLLCW*SFDKGL Trigger: GAGACCTTTGTCAAAGGAGCACCAACACAACAGCCA...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGTTCCTTCAGCTTATCTaGCATAGTCCTAAAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GDGKDFMKADSSQTQSLQFLQLI*HSPKKE Trigger: TTCCTTTTTAGGACTATGTCAGATAAGCTGAAGGAA...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGCAACATCAGGAGCCTTaGACTCAGTCAGATTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: AALGNILGGCCVGAPLTKQHQEP*TQSDFN Trigger: GTTGAAATCTGACTGAGTCAAAGGCTCCTGATGTTG...CTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR GCA 72 bp | AGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTaGTCCTTTGACAAAGGTCTCTTCAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: SLGEHSRWLLCW*SFDKGLFKTAT Trigger: TGTAGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTCCTTCAACATCAGGAGCCTTaGACTCAGTCAGATTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: SLQLWQAAFPPFMNSRFLQHQEP*TQSDFN Trigger: GTTGAAATCTGACTGAGTCAAAGGCTCCTGATGTTG...AAGGAACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTCAACATCAGGAGCCTTaGACTCAGTCAGATTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: SKSPAMASSISSLHEQQVQHQEP*TQSDFN Trigger: GTTGAAATCTGACTGAGTCAAAGGCTCCTGATGTTG...AACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR TCA 72 bp | GGAACATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTaGCAAAGGTCTCTTCAAGACAGCTACATATTTAGG | + |
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Preference number: 3 (lower is better) Translates to: GTFSVAVVLVLL*QRSLQDSYIFR Trigger: CCTAAATATGTAGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR-3UTR CAA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTACAACTAATGATAGTTTaGAAGATCAACACTGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: HIVLALSEPSTNKAPAIVQLMIV*KINTGH Trigger: ATGGCCAGTGTTGATCTTCAAAACTATCATTAGTTG...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR TCA 72 bp | AGGTACATCCTAAGTTCCAAGTGTAAACACTGCTATTaGGTTAGTGTACAGGAACAAACACATTCATCCTTA | + |
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Preference number: 3 (lower is better) Translates to: RYILSSKCKHCY*VSVQEQTHSSL Trigger: TAAGGATGAATGTGTTTGTTCCTGTACACTAACTCAATAGCAGTGTTTACACTTGGAACTTAGGATGTACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR TCA 90 bp | GCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGCCAGCCGGAGGACCTTaGGGCGAGGACAGCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: AALGNILGGCCVGAPLTKPAGGP*GEDSRI Trigger: TATCCTGCTGTCCTCGCCTCAAGGTCCTCCGGCTGG...CTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR TCA 90 bp | AGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTCCTTCCAGCCGGAGGACCTTaGGGCGAGGACAGCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: SLQLWQAAFPPFMNSRFLPAGGP*GEDSRI Trigger: TATCCTGCTGTCCTCGCCTCAAGGTCCTCCGGCTGG...AAGGAACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| CDS-3UTR TCA 90 bp | ATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGCCAGCCGGAGGACCTTaGGGCGAGGACAGCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: ILGGCCVGAPLTKVSSRQPAGGP*GEDSRI Trigger: TATCCTGCTGTCCTCGCCTCAAGGTCCTCCGGCTGG...CTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR TCA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGCCAGCCGGAGGACCTTaGGGCGAGGACAGCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: GDGKDFMKADSSQTQSLQPAGGP*GEDSRI Trigger: TATCCTGCTGTCCTCGCCTCAAGGTCCTCCGGCTGG...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| CDS-3UTR GCA 90 bp | GCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGTTGCTTGTCAGCTTCTaGAACTCTGAGGGGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: AALGNILGGCCVGAPLTKLLVSF*NSEGNS Trigger: CGAGTTCCCCTCAGAGTTGCAGAAGCTGACAAGCAA...CTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR TCA 90 bp | TCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGCTTGCGCTGTTTCCACATaGGCACGGAGAGCACTGTTA | + |
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Preference number: 4 (lower is better) Translates to: SRWLLCWCSFDKGLFKTACAVST*ARRALL Trigger: TAACAGTGCTCTCCGTGCTCATGTGGAAACAGCGCA...AGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| 3UTR CAA 72 bp | TGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTaGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: CYCSLGEHSRWL*CWCSFDKGLFK Trigger: CTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR GCA 90 bp | AAAATTTGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTTGCTTGTCAGCTTCTaGAACTCTGAGGGGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: KICYCSLGEHSRWLLCWCLLVSF*NSEGNS Trigger: CGAGTTCCCCTCAGAGTTGCAGAAGCTGACAAGCAA...GCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCAAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR CCA 90 bp | ATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGGCAAGCAGGCAGATTTaGGAGTCACTGAGGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: ILGGCCVGAPLTKVSSRQASRQI*ESLRML Trigger: GAGCATCCTCAGTGACTCCCAAATCTGCCTGCTTGC...CTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR TCA 90 bp | CCTACTCCTAAATCCCTTTCCTTCAGCTTATCTGACATAGTCCTAAAAAGGAAACCAGCCGGAGGACCTTaGGGCGAGGACAGCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: PTPKSLSFSLSDIVLKRKPAGGP*GEDSRI Trigger: TATCCTGCTGTCCTCGCCTCAAGGTCCTCCGGCTGG...TTTCCTTTTTAGGACTATGTCAGATAAGCTGAAGGAAAGGGATTTAGGAGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTTCTGTGGAAGCATGCTaGGCTCAAGGCAGTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SKSPAMASSISSLHEQQVSVEAC*AQGSSL Trigger: AAGAGAACTGCCTTGAGCTCAGCATGCTTCCACAGA...AACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| CDS-3UTR TCA 90 bp | ATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGTCTGTGGAAGCATGCTaGGCTCAAGGCAGTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ILGGCCVGAPLTKVSSRQSVEAC*AQGSSL Trigger: AAGAGAACTGCCTTGAGCTCAGCATGCTTCCACAGA...CTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR CCA 90 bp | TTCGCAAACTCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAAGCAAGCAGGCAGATTTaGGAGTCACTGAGGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: FANSKSPAMASSISSLHEASRQI*ESLRML Trigger: GAGCATCCTCAGTGACTCCCAAATCTGCCTGCTTGC...TTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGAGTTTGCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| CDS-3UTR TCA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGTGCGCTGTTTCCACATaGGCACGGAGAGCACTGTTA | + |
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Preference number: 4 (lower is better) Translates to: GDGKDFMKADSSQTQSLQCAVST*ARRALL Trigger: TAACAGTGCTCTCCGTGCTCATGTGGAAACAGCGCA...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR TCA 90 bp | TTCGCAAACTCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAATCTGTGGAAGCATGCTaGGCTCAAGGCAGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FANSKSPAMASSISSLHESVEAC*AQGSSL Trigger: AAGAGAACTGCCTTGAGCTCAGCATGCTTCCACAGA...TTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGAGTTTGCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| CDS-3UTR CCA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGGCAAGCAGGCAGATTTaGGAGTCACTGAGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDGKDFMKADSSQTQSLQASRQI*ESLRML Trigger: GAGCATCCTCAGTGACTCCCAAATCTGCCTGCTTGC...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
||
| CDS-3UTR TCA 90 bp | TCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGCTGGCTCTTTAGCAGAGTaGACTTTCCTATTATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRWLLCWCSFDKGLFKTAGSLAE*TFLLSE Trigger: CTCTGATAATAGGAAAGTTCACTCTGCTAAAGAGCC...AGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTCCTTGGCTCTTTAGCAGAGTaGACTTTCCTATTATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQLWQAAFPPFMNSRFLGSLAE*TFLLSE Trigger: CTCTGATAATAGGAAAGTTCACTCTGCTAAAGAGCC...AAGGAACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR TCA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGTCTGTGGAAGCATGCTaGGCTCAAGGCAGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GDGKDFMKADSSQTQSLQSVEAC*AQGSSL Trigger: AAGAGAACTGCCTTGAGCTCAGCATGCTTCCACAGA...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
||
| CDS-3UTR GCA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGTTGCTTGTCAGCTTCTaGAACTCTGAGGGGAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GDGKDFMKADSSQTQSLQLLVSF*NSEGNS Trigger: CGAGTTCCCCTCAGAGTTGCAGAAGCTGACAAGCAA...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR GCA 90 bp | AAAATTTGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTTATTTCAAAGAGATTaGCTTCCACAGCAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KICYCSLGEHSRWLLCWCLFQRD*LPQQAG Trigger: GCCTGCTTGCTGTGGAAGGCAATCTCTTTGAAATAA...GCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCAAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTTTATTTCAAAGAGATTaGCTTCCACAGCAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKSPAMASSISSLHEQQVLFQRD*LPQQAG Trigger: GCCTGCTTGCTGTGGAAGGCAATCTCTTTGAAATAA...AACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| 3UTR CAA 72 bp | AACAGCAGGTTCCTTAGAGCCCAACTAATGATAGTTTaGAAGATCAACACTGGCCATGACCTACACGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSRFLRAQLMIV*KINTGHDLHGS Trigger: TGAGCCGTGTAGGTCATGGCCAGTGTTGATCTTCAAAACTATCATTAGTTGGGCTCTAAGGAACCTGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| CDS-3UTR TCA 90 bp | CCTACTCCTAAATCCCTTTCCTTCAGCTTATCTGACATAGTCCTAAAAAGGAAATGCGCTGTTTCCACATaGGCACGGAGAGCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PTPKSLSFSLSDIVLKRKCAVST*ARRALL Trigger: TAACAGTGCTCTCCGTGCTCATGTGGAAACAGCGCA...TTTCCTTTTTAGGACTATGTCAGATAAGCTGAAGGAAAGGGATTTAGGAGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTCCTTGGTATACTCCGAATCTaGTTTTTAGAGAGATCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SLQLWQAAFPPFMNSRFLGILRI*FLERST Trigger: AGTAGATCTCTCTAAAAACCAGATTCGGAGTATACC...AAGGAACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
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| CDS-3UTR GCA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTATTGCTTGTCAGCTTCTaGAACTCTGAGGGGAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: HIVLALSEPSTNKAPAIVLLVSF*NSEGNS Trigger: CGAGTTCCCCTCAGAGTTGCAGAAGCTGACAAGCAA...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR GCA 90 bp | CCTACTCCTAAATCCCTTTCCTTCAGCTTATCTGACATAGTCCTAAAAAGGAAATTCAGGGCAGACAACTaGCCAAAGGTAGATGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPKSLSFSLSDIVLKRKFRADN*PKVDGS Trigger: GCTACCATCTACCTTTGGGCAGTTGTCTGCCCTGAA...TTTCCTTTTTAGGACTATGTCAGATAAGCTGAAGGAAAGGGATTTAGGAGTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR GCA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGTTATTTCAAAGAGATTaGCTTCCACAGCAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDGKDFMKADSSQTQSLQLFQRD*LPQQAG Trigger: GCCTGCTTGCTGTGGAAGGCAATCTCTTTGAAATAA...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
||
| CDS-3UTR CCA 90 bp | TTCGCAAACTCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAAGGTATACTCCGAATCTaGTTTTTAGAGAGATCTACT | + |
|
Preference number: 4 (lower is better) Translates to: FANSKSPAMASSISSLHEGILRI*FLERST Trigger: AGTAGATCTCTCTAAAAACCAGATTCGGAGTATACC...TTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGAGTTTGCGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
||
| CDS-3UTR CCA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGGGTATACTCCGAATCTaGTTTTTAGAGAGATCTACT | + |
|
Preference number: 4 (lower is better) Translates to: GDGKDFMKADSSQTQSLQGILRI*FLERST Trigger: AGTAGATCTCTCTAAAAACCAGATTCGGAGTATACC...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
||
| CDS-3UTR GCA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTATTATTTCAAAGAGATTaGCTTCCACAGCAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HIVLALSEPSTNKAPAIVLFQRD*LPQQAG Trigger: GCCTGCTTGCTGTGGAAGGCAATCTCTTTGAAATAA...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CCA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTAGGTATACTCCGAATCTaGTTTTTAGAGAGATCTACT | + |
|
Preference number: 4 (lower is better) Translates to: HIVLALSEPSTNKAPAIVGILRI*FLERST Trigger: AGTAGATCTCTCTAAAAACCAGATTCGGAGTATACC...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CCA 90 bp | CCTACTCCTAAATCCCTTTCCTTCAGCTTATCTGACATAGTCCTAAAAAGGAAAGGTATACTCCGAATCTaGTTTTTAGAGAGATCTACT | + |
|
Preference number: 4 (lower is better) Translates to: PTPKSLSFSLSDIVLKRKGILRI*FLERST Trigger: AGTAGATCTCTCTAAAAACCAGATTCGGAGTATACC...TTTCCTTTTTAGGACTATGTCAGATAAGCTGAAGGAAAGGGATTTAGGAGTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR CAA 90 bp | AAAATTTGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCAGCAAGCAGGCAGATTaGGGAGTCACTGAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: KICYCSLGEHSRWLLCWCSKQAD*GVTEDA Trigger: AGCATCCTCAGTGACTCCCAAATCTGCCTGCTTGCT...GCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCAAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | TCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGCTAGCAAGCAGGCAGATTaGGGAGTCACTGAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRWLLCWCSFDKGLFKTASKQAD*GVTEDA Trigger: AGCATCCTCAGTGACTCCCAAATCTGCCTGCTTGCT...AGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGTGGTTCTGGTTGAGATaGAGTTCGATGGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILGGCCVGAPLTKVSSRQWFWLR*SSMACS Trigger: GCTGCAGGCCATCGAACTCAATCTCAACCAGAACCA...CTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
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| CDS-3UTR CAA 90 bp | GCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGTTTATTTCAAAGAGATaGCCTTCCACAGCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AALGNILGGCCVGAPLTKFISKR*PSTASR Trigger: CCTGCTTGCTGTGGAAGGCAATCTCTTTGAAATAAA...CTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | TCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGCTCATGCAAATTTCTTCTaGGTGGCTGTGAACCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRWLLCWCSFDKGLFKTAHANFF*VAVNLS Trigger: GGAGAGGTTCACAGCCACCAAGAAGAAATTTGCATG...AGCTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | AAAATTTGCTACTGCAGCCTTGGGGAACATTCTCGGTGGCTGTTGTGTTGGTGCCATGCAAATTTCTTCTaGGTGGCTGTGAACCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KICYCSLGEHSRWLLCWCHANFF*VAVNLS Trigger: GGAGAGGTTCACAGCCACCAAGAAGAAATTTGCATG...GCACCAACACAACAGCCACCGAGAATGTTCCCCAAGGCTGCAGTAGCAAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGAGCAAGCAGGCAGATTaGGGAGTCACTGAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GDGKDFMKADSSQTQSLQSKQAD*GVTEDA Trigger: AGCATCCTCAGTGACTCCCAAATCTGCCTGCTTGCT...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTCGGTGGCTGTTGTGTTGGTGCTCCTTTGACAAAGGTCTCTTCAAGACAGCATGCAAATTTCTTCTaGGTGGCTGTGAACCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILGGCCVGAPLTKVSSRQHANFF*VAVNLS Trigger: GGAGAGGTTCACAGCCACCAAGAAGAAATTTGCATG...CTGTCTTGAAGAGACCTTTGTCAAAGGAGCACCAACACAACAGCCACCGAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTCCTTAGGCTGTCAATCTTGTaGTTGGATAAATCGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLQLWQAAFPPFMNSRFLRLSIL*LDKSMV Trigger: GACCATCGATTTATCCAACAACAAGATTGACAGCCT...AAGGAACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTCCTTTTTATTTCAAAGAGATaGCCTTCCACAGCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQLWQAAFPPFMNSRFLFISKR*PSTASR Trigger: CCTGCTTGCTGTGGAAGGCAATCTCTTTGAAATAAA...AAGGAACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAGTCTCCAGCTATGGCAAGCAGCATTTCCTCCCTTCATGAACAGCAGGTTAGGCTGTCAATCTTGTaGTTGGATAAATCGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKSPAMASSISSLHEQQVRLSIL*LDKSMV Trigger: GACCATCGATTTATCCAACAACAAGATTGACAGCCT...AACCTGCTGTTCATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | CCTACTCCTAAATCCCTTTCCTTCAGCTTATCTGACATAGTCCTAAAAAGGAAAAGCAAGCAGGCAGATTaGGGAGTCACTGAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTPKSLSFSLSDIVLKRKSKQAD*GVTEDA Trigger: AGCATCCTCAGTGACTCCCAAATCTGCCTGCTTGCT...TTTCCTTTTTAGGACTATGTCAGATAAGCTGAAGGAAAGGGATTTAGGAGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGAGGCTGTCAATCTTGTaGTTGGATAAATCGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GDGKDFMKADSSQTQSLQRLSIL*LDKSMV Trigger: GACCATCGATTTATCCAACAACAAGATTGACAGCCT...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATGGGAAAGACTTTATGAAAGCTGACAGTTCGCAAACTCAAAGTCTCCAGTTTATTTCAAAGAGATaGCCTTCCACAGCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDGKDFMKADSSQTQSLQFISKR*PSTASR Trigger: CCTGCTTGCTGTGGAAGGCAATCTCTTTGAAATAAA...CTGGAGACTTTGAGTTTGCGAACTGTCAGCTTTCATAAAGTCTTTCCCATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000135465.2 |
||
| CDS-3UTR CAA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTACATGCAAATTTCTTCTaGGTGGCTGTGAACCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HIVLALSEPSTNKAPAIVHANFF*VAVNLS Trigger: GGAGAGGTTCACAGCCACCAAGAAGAAATTTGCATG...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | CCTACTCCTAAATCCCTTTCCTTCAGCTTATCTGACATAGTCCTAAAAAGGAAAAGGCTGTCAATCTTGTaGTTGGATAAATCGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PTPKSLSFSLSDIVLKRKRLSIL*LDKSMV Trigger: GACCATCGATTTATCCAACAACAAGATTGACAGCCT...TTTCCTTTTTAGGACTATGTCAGATAAGCTGAAGGAAAGGGATTTAGGAGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS-3UTR CAA 90 bp | CATATAGTTTTAGCTCTTTCAGAGCCTTCTACCAATAAGGCACCTGCAATAGTATTTATTTCAAAGAGATaGCCTTCCACAGCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HIVLALSEPSTNKAPAIVFISKR*PSTASR Trigger: CCTGCTTGCTGTGGAAGGCAATCTCTTTGAAATAAA...TACTATTGCAGGTGCCTTATTGGTAGAAGGCTCTGAAAGAGCTAAAACTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 |
||
| CDS TCA 72 bp | GATGGTCCTAAGATTGCTTGTCAGCTTCTGCAACTCTaGGGGGAACTCGGTCAGACCACGGTCTTTAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DGPKIACQLLQL*GELGQTTVFKL Trigger: CAGCTTAAAGACCGTGGTCTGACCGAGTTCCCCTCAGAGTTGCAGAAGCTGACAAGCAATCTTAGGACCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000102496.8 ENSMUST00000102497.10 ENSMUST00000102498.8 ENSMUST00000102499.8 ENSMUST00000133612.2 |
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