Pregenerated sensors for LRRC56 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038637Ensembl transcript IDs: ENSMUST00000047093.11, ENSMUST00000070458.11, ENSMUST00000084446.9, ENSMUST00000144008.2, ENSMUST00000209220.2
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGCCATCCAAGTCAGTCAGGCCACAGCGAGCCAGCCACAGCACCTaGAGGTGGCCCAGCGAAGTGCCCAGGTCTCTGAGGGAGCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: MPSKSVRPQRASHST*RWPSEVPRSLREPR Trigger: CCTGGGCTCCCTCAGAGACCTGGGCACTTCGCTGGGCCACCTGCAGGTGCTGTGGCTGGCTCGCTGTGGCCTGACTGACTTGGATGGCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR GCA 90 bp | GGCACAGCTGCAGGTACCGCATCTGCCCCAGGTCCTCCACATTGTTaGCCTCCAGGTCCAGCACCTCTAGCTGCTCGAGCAGGCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: GTAAGTASAPGPPHC*PPGPAPLAARAGTV Trigger: CACTGTGCCTGCTCGAGCAGCTAGAGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCAGCTGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR GCA 90 bp | AGTGTGAGCATGGCCAAGCGTGGGCACAGCTGCAGGTACCGCATCTaGCCCAGGTCCTCCACATTGTTGCCCTCCAGGTCCAGCACCTCT | + |
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Preference number: 1 (lower is better) Translates to: SVSMAKRGHSCRYRI*PRSSTLLPSRSSTS Trigger: AGAGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTCACACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR GCA 90 bp | ACCAGATTCCCCTCCAGTGTGAGCATGGCCAAGCGTGGGCACAGCTaGAGGTACCGCATCTGCCCCAGGTCCTCCACATTGTTGCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: TRFPSSVSMAKRGHS*RYRICPRSSTLLPS Trigger: GGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTCACACTGGAGGGGAATCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR CCA 90 bp | CTTCAGGCACACCAGATTCCCCTCCAGTGTGAGCATGGCCAAGCGTaGGCACAGCTGCAGGTACCGCATCTGCCCCAGGTCCTCCACATT | + |
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Preference number: 1 (lower is better) Translates to: LQAHQIPLQCEHGQA*AQLQVPHLPQVLHI Trigger: AATGTGGAGGACCTGGGGCAGATGCGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTCACACTGGAGGGGAATCTGGTGTGCCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR CCA 90 bp | CTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTaGCCCCACCTAGGCCAAGAGATATCAGCAAGGGAAGGTTACACT | + |
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Preference number: 1 (lower is better) Translates to: LGYLKGPAPAPPTSL*PHLGQEISAREGYT Trigger: AGTGTAACCTTCCCTTGCTGATATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| 3UTR CCA 90 bp | AAGAGATATCAGCAAGGGAAGGTTACACTAAGGGAGAGAATGGGCTaGAGGGATAGGGTTCAGGTGATGAAGGCAGTGGAGCCCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: KRYQQGKVTLRERMG*RDRVQVMKAVEPWR Trigger: CCTCCAGGGCTCCACTGCCTTCATCACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCTTAGTGTAACCTTCCCTTGCTGATATCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| 3UTR GCA 90 bp | TGTTGTAGGAGACATAAAGTTCCTTCAGTTCCAAGAAGGAGCCAATaGCATCCAAGTCAGTCAGGCCACAGCGAGCCAGCCACAGCACCT | + |
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Preference number: 1 (lower is better) Translates to: CCRRHKVPSVPRRSQ*HPSQSGHSEPATAP Trigger: AGGTGCTGTGGCTGGCTCGCTGTGGCCTGACTGACTTGGATGGCATTGGCTCCTTCTTGGAACTGAAGGAACTTTATGTCTCCTACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR GCA 90 bp | GCTTGGCTTTTACAGAGGGTATATGGTGTCCCAACAGAAAGGAACTaGCCCCACATAAGGAAACCTGCAAATCTTCCCAGGATGCTTGCG | + |
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Preference number: 1 (lower is better) Translates to: AWLLQRVYGVPTERN*PHIRKPANLPRMLA Trigger: CGCAAGCATCCTGGGAAGATTTGCAGGTTTCCTTATGTGGGGGCAGTTCCTTTCTGTTGGGACACCATATACCCTCTGTAAAAGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| 3UTR CAA 90 bp | CGTGGGCACAGCTGCAGGTACCGCATCTGCCCCAGGTCCTCCACATaGTTGCCCTCCAGGTCCAGCACCTCTAGCTGCTCGAGCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RGHSCRYRICPRSST*LPSRSSTSSCSSRH Trigger: GTGCCTGCTCGAGCAGCTAGAGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCAGCTGTGCCCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR CAA 90 bp | GGGCACAGCTGCAGGTACCGCATCTGCCCCAGGTCCTCCACATTGTaGCCCTCCAGGTCCAGCACCTCTAGCTGCTCGAGCAGGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: GHSCRYRICPRSSTL*PSRSSTSSCSSRHS Trigger: ACTGTGCCTGCTCGAGCAGCTAGAGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCAGCTGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR-3UTR TCA 90 bp | GGTACCGCATCTGCCCCAGGTCCTCCACATTGTTGCCCTCCAGGTCCAGCACCTAAGTGCCCAGGTCTCTaGGGGAGCCCAGGTAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GTASAPGPPHCCPPGPAPKCPGL*GSPGSC Trigger: ACAGCTACCTGGGCTCCCTCAGAGACCTGGGCACTT...AGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR-3UTR GCA 90 bp | GGTACCGCATCTGCCCCAGGTCCTCCACATTGTTGCCCTCCAGGTCCAGCACCTCCAAGAAGGAGCCAATaGCATCCAAGTCAGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GTASAPGPPHCCPPGPAPPRRSQ*HPSQSG Trigger: GCCTGACTGACTTGGATGGCATTGGCTCCTTCTTGG...AGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAATTTGGGCCATATAGATaGCCCAGAGTCCTGGGATAT | + |
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Preference number: 2 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQFGPYR*PRVLGY Trigger: ATATCCCAGGACTCTGGGTCATCTATATGGCCCAAA...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGTTACACTAAGGGAGAGAATGGGCTGGAGGGATAGGGTTCAGGTGATGCCACATAAGGAAACCTaGAAATCTTCCCAGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: GKVTLRERMGWRDRVQVMPHKET*KSSQDA Trigger: AGCATCCTGGGAAGATTTGCAGGTTTCCTTATGTGG...CATCACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCTTAGTGTAACCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| 3UTR-3UTR CCA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATAAGGGAGAGAATGGGCTaGAGGGATAGGGTTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: DACAILNPRISRLRIWAIRERMG*RDRVQV Trigger: CACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCT...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| 3UTR-3UTR TCA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATATTTGGGCCATATAGATaGCCCAGAGTCCTGGGATAT | + |
|
Preference number: 2 (lower is better) Translates to: DACAILNPRISRLRIWAIFGPYR*PRVLGY Trigger: ATATCCCAGGACTCTGGGTCATCTATATGGCCCAAA...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATTCTGAAGGGCAGGTCTaGAGATCTCCCCAAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: ISAYLRVENDSLGFYRGYSEGQV*RSPQGA Trigger: AGCTCCTTGGGGAGATCTGCAGACCTGCCCTTCAGA...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACCCACATAAGGAAACCTaGAAATCTTCCCAGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: VKHISAYLRVENDSLGFYPHKET*KSSQDA Trigger: AGCATCCTGGGAAGATTTGCAGGTTTCCTTATGTGG...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| 3UTR CCA 72 bp | GTCAGGCCACAGCGAGCCAGCCACAGCACCTGCAGGTaGCCCAGCGAAGTGCCCAGGTCTCTGAGGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: VRPQRASHSTCR*PSEVPRSLREP Trigger: GGGCTCCCTCAGAGACCTGGGCACTTCGCTGGGCCACCTGCAGGTGCTGTGGCTGGCTCGCTGTGGCCTGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR GCA 72 bp | AAGTCAGTCAGGCCACAGCGAGCCAGCCACAGCACCTaGAGGTGGCCCAGCGAAGTGCCCAGGTCTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: KSVRPQRASHST*RWPSEVPRSLR Trigger: CCTCAGAGACCTGGGCACTTCGCTGGGCCACCTGCAGGTGCTGTGGCTGGCTCGCTGTGGCCTGACTGACTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR GCA 72 bp | ATGGCCAAGCGTGGGCACAGCTGCAGGTACCGCATCTaGCCCAGGTCCTCCACATTGTTGCCCTCCAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: MAKRGHSCRYRI*PRSSTLLPSRS Trigger: GGACCTGGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCAGCTGTGCCCACGCTTGGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR GCA 72 bp | CCCTCCAGTGTGAGCATGGCCAAGCGTGGGCACAGCTaGAGGTACCGCATCTGCCCCAGGTCCTCCACATTG | + |
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Preference number: 3 (lower is better) Translates to: PSSVSMAKRGHS*RYRICPRSSTL Trigger: CAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTCACACTGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR CCA 72 bp | CACCAGATTCCCCTCCAGTGTGAGCATGGCCAAGCGTaGGCACAGCTGCAGGTACCGCATCTGCCCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: HQIPLQCEHGQA*AQLQVPHLPQV Trigger: GACCTGGGGCAGATGCGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTCACACTGGAGGGGAATCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR GCA 72 bp | TCCACATTGTTGCCCTCCAGGTCCAGCACCTCTAGCTaGTCGAGCAGGCACAGTGGGCTCAGGTCCGAGATG | + |
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Preference number: 3 (lower is better) Translates to: STLLPSRSSTSS*SSRHSGLRSEM Trigger: CATCTCGGACCTGAGCCCACTGTGCCTGCTCGAGCAGCTAGAGGTGCTGGACCTGGAGGGCAACAATGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| 3UTR CCA 72 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTaGCCCCACCTAGGCCAAGAGATATCAGCAAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LKGPAPAPPTSL*PHLGQEISARE Trigger: TTCCCTTGCTGATATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| 3UTR CCA 72 bp | CAGCAAGGGAAGGTTACACTAAGGGAGAGAATGGGCTaGAGGGATAGGGTTCAGGTGATGAAGGCAGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: QQGKVTLRERMG*RDRVQVMKAVE Trigger: CTCCACTGCCTTCATCACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCTTAGTGTAACCTTCCCTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| 3UTR GCA 72 bp | TTACAGAGGGTATATGGTGTCCCAACAGAAAGGAACTaGCCCCACATAAGGAAACCTGCAAATCTTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LQRVYGVPTERN*PHIRKPANLPR Trigger: CCTGGGAAGATTTGCAGGTTTCCTTATGTGGGGGCAGTTCCTTTCTGTTGGGACACCATATACCCTCTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| 3UTR GCA 72 bp | CCACATAAGGAAACCTGCAAATCTTCCCAGGATGCTTaGGCAATTTTGAACCCTAGGATAAGCAGGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: PHKETCKSSQDA*AILNPRISRLR Trigger: TCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATCCTGGGAAGATTTGCAGGTTTCCTTATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | CAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCACCTGGGCCAGGGCCTaGAGTCGAGCAGGGGATAGG | + |
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Preference number: 4 (lower is better) Translates to: QGSQGSHCSQPLTQDRPLTWARA*SRAGDR Trigger: CCTATCCCCTGCTCGACTGCAGGCCCTGGCCCAGGT...GAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATCCTGGTCGAGACCCCTaGGATCCATCCCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDPGRDP*DPSQAG Trigger: CCCAGCCTGGGATGGATCCCAGGGGTCTCGACCAGG...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | CAGGACAGACCCCTCACCCAGGCTAGGCCCCAAGCTGCCCAGAACTCTAAGCCTCCTGGTCGAGACCCCTaGGATCCATCCCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QDRPLTQARPQAAQNSKPPGRDP*DPSQAG Trigger: CCCAGCCTGGGATGGATCCCAGGGGTCTCGACCAGG...AGGCTTAGAGTTCTGGGCAGCTTGGGGCCTAGCCTGGGTGAGGGGTCTGTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATGGGTCTGGACATCCCTaGGCTCGATGGCTGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDGSGHP*ARWLGP Trigger: AGGCCCCAGCCATCGAGCCCAGGGATGTCCAGACCC...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR TCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATGATTCCCCTCCAGTGTaGGCATGGCCAAGCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDDSPPV*AWPSVG Trigger: GCCCACGCTTGGCCATGCTCACACTGGAGGGGAATC...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GAAGGAGCCAATGCCATCCAAGTCAGTCAGGCCACAGCGAGCCAGCCACAGCACCCTGGTCGAGACCCCTaGGATCCATCCCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EGANAIQVSQATASQPQHPGRDP*DPSQAG Trigger: CCCAGCCTGGGATGGATCCCAGGGGTCTCGACCAGG...GTGCTGTGGCTGGCTCGCTGTGGCCTGACTGACTTGGATGGCATTGGCTCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTCCAGCACCTCTAGCTGCTCGAGCAGGCACAGTGGGCTCAGGTCCGAGAACCCACCGCTCCCTATaGATATCCCCATGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PGPAPLAARAGTVGSGPRTHRSL*ISPWLP Trigger: GGGCAGCCATGGGGATATCCATAGGGAGCGGTGGGT...TCTCGGACCTGAGCCCACTGTGCCTGCTCGAGCAGCTAGAGGTGCTGGACCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCGAGCATGGCCAAGCGTaGGCACAGCTGCAGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: QGSQGSHCSQPLTQDRPLEHGQA*AQLQVP Trigger: CGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTC...GAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | CAGGACAGACCCCTCACCCAGGCTAGGCCCCAAGCTGCCCAGAACTCTAAGCCTCCTGGGGCGCCTTGTTaGAAGGGCCAGGATCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QDRPLTQARPQAAQNSKPPGAPC*KGQDLA Trigger: AGCCAGATCCTGGCCCTTCCAACAAGGCGCCCCAGG...AGGCTTAGAGTTCTGGGCAGCTTGGGGCCTAGCCTGGGTGAGGGGTCTGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATCAGGGACAAGGCCCATaGCTGGGTCTCAGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDQGQGP*LGLRHR Trigger: CCTGTGCCTGAGACCCAGCCATGGGCCTTGTCCCTG...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR TCA 90 bp | GACGCCTCCAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAAAGTGCCCAGGTCTCTaGGGGAGCCCAGGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DASRALKAVTAANLSPRTKCPGL*GSPGSC Trigger: ACAGCTACCTGGGCTCCCTCAGAGACCTGGGCACTT...TGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTGGAGGCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATGGGTTGTTTAGGCCCTaGCAGCTCAGCTCCCGTACC | + |
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Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDGLFRP*QLSSRT Trigger: GGTACGGGAGCTGAGCTGGCAGGGCCTAAACAACCC...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GACGCCTCCAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACAAGGCCCATGGCTaGGTCTCAGGCACAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: DASRALKAVTAANLSPRTDKAHG*VSGTGK Trigger: CTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTGTC...TGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTGGAGGCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAACAGGGACAAGGCCCATaGCTGGGTCTCAGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQQGQGP*LGLRHR Trigger: CCTGTGCCTGAGACCCAGCCATGGGCCTTGTCCCTG...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAAAGGCAGTGGAGCCCTaGAGGGCAAGCTGCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQKAVEP*RASCWT Trigger: GGTCCAGCAGCTTGCCCTCCAGGGCTCCACTGCCTT...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR TCA 90 bp | CAGGACAGACCCCTCACCCAGGCTAGGCCCCAAGCTGCCCAGAACTCTAAGCCTCGTGCAGCTGGGGGATaGGCTTCTTTACCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QDRPLTQARPQAAQNSKPRAAGG*ASLPLL Trigger: GAGCAGAGGTAAAGAAGCTCATCCCCCAGCTGCACG...AGGCTTAGAGTTCTGGGCAGCTTGGGGCCTAGCCTGGGTGAGGGGTCTGTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR TCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATGACCAGGACCATGGGTaGGGTTGCTGGCATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDDQDHG*GCWHGL Trigger: AAGACCATGCCAGCAACCTCACCCATGGTCCTGGTC...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | GACGCCTCCAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCAGGACCATGGGTaGGGTTGCTGGCATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DASRALKAVTAANLSPRTDQDHG*GCWHGL Trigger: AAGACCATGCCAGCAACCTCACCCATGGTCCTGGTC...TGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTGGAGGCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGGGTTGTTTAGGCCCTaGCAGCTCAGCTCCCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQGLFRP*QLSSRT Trigger: GGTACGGGAGCTGAGCTGGCAGGGCCTAAACAACCC...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | AATGCCATCCAAGTCAGTCAGGCCACAGCGAGCCAGCCACAGCACCTGCAGGTGGGGTTGTTTAGGCCCTaGCAGCTCAGCTCCCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: NAIQVSQATASQPQHLQVGLFRP*QLSSRT Trigger: GGTACGGGAGCTGAGCTGGCAGGGCCTAAACAACCC...CACCTGCAGGTGCTGTGGCTGGCTCGCTGTGGCCTGACTGACTTGGATGGCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGGCCAGCCACAGCACCTaGAGGTGGCCCAGCGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLASHST*RWPSEV Trigger: CACTTCGCTGGGCCACCTGCAGGTGCTGTGGCTGGC...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAACCCACCGCTCCCTATaGATATCCCCATGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQTHRSL*ISPWLP Trigger: GGGCAGCCATGGGGATATCCATAGGGAGCGGTGGGT...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATCTCGAGCAGGCACAGTaGGCTCAGGTCCGAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDLEQAQ*AQVRDV Trigger: AACATCTCGGACCTGAGCCCACTGTGCCTGCTCGAG...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCCTGGGGCGCCTTGTTaGAAGGGCCAGGATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGYLKGPAPAPPTSLWPHPGAPC*KGQDLA Trigger: AGCCAGATCCTGGCCCTTCCAACAAGGCGCCCCAGG...GTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTCCTGGGGCGCCTTGTTaGAAGGGCCAGGATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPPGAPC*KGQDLA Trigger: AGCCAGATCCTGGCCCTTCCAACAAGGCGCCCCAGG...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATCCCGAAGCCCAGTCATaGCCAGGTCACAGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDPEAQS*PGHSFL Trigger: CAGAAAGCTGTGACCTGGCCATGACTGGGCTTCGGG...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR CCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAAGGCAGTGGAGCCCTaGAGGGCAAGCTGCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPKAVEP*RASCWT Trigger: GGTCCAGCAGCTTGCCCTCCAGGGCTCCACTGCCTT...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACAAGTGCCCAGGTCTCTaGGGGAGCCCAGGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGYLKGPAPAPPTSLWPHKCPGL*GSPGSC Trigger: ACAGCTACCTGGGCTCCCTCAGAGACCTGGGCACTT...GTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAAGTGCCCAGGTCTCTaGGGGAGCCCAGGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPKCPGL*GSPGSC Trigger: ACAGCTACCTGGGCTCCCTCAGAGACCTGGGCACTT...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGGATTCCCCTCCAGTGTaGGCATGGCCAAGCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLDSPPV*AWPSVG Trigger: GCCCACGCTTGGCCATGCTCACACTGGAGGGGAATC...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR TCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATGCACGCTGCCTTCCTTaGTGGCTTCCTTCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDARCLP*WLPSPS Trigger: TGATGGTGAAGGAAGCCATCAAGGAAGGCAGCGTGC...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | GCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCACCCGCACGCTGCCTTCCTTaGTGGCTTCCTTCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ALKAVTAANLSPRTDPSPARCLP*WLPSPS Trigger: TGATGGTGAAGGAAGCCATCAAGGAAGGCAGCGTGC...GGGTGAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGACCTGGGCCAGGGCCTaGAGTCGAGCAGGGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWTWARA*SRAGDR Trigger: CCTATCCCCTGCTCGACTGCAGGCCCTGGCCCAGGT...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCGCCAGCCACAGCACCTaGAGGTGGCCCAGCGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFASHST*RWPSEV Trigger: CACTTCGCTGGGCCACCTGCAGGTGCTGTGGCTGGC...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGGTCCTCCACATTGTTaGCCTCCAGGTCCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQGPPHC*PPGPAP Trigger: AGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACC...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAATGCAGGTACCGCATCTaGCCCAGGTCCTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQCRYRI*PRSSTL Trigger: CAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCA...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATTCTGAAGGGCAGGTCTaGAGATCTCCCCAAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDSEGQV*RSPQGA Trigger: AGCTCCTTGGGGAGATCTGCAGACCTGCCCTTCAGA...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR CCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTTGGAGGTCATCTACCTaGGCCAGGGCCTGCAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPWRSST*ARACSR Trigger: TCGACTGCAGGCCCTGGCCCAGGTAGATGACCTCCA...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATGGAAGGGCCAGGATCTaGCTTCAGGCACACCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDGRARI*LQAHQI Trigger: AATCTGGTGTGCCTGAAGCCAGATCCTGGCCCTTCC...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCGAATGGTGGCTCCATaGGGATCATCCAGCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGYLKGPAPAPPTSLWPHRMVAP*GSSSRG Trigger: CCCTCGGCTGGATGATCCCCATGGAGCCACCATTCG...GTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATGTGAGGTTGCTGGCATaGTCTTCTGTGGCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDVRLLA*SSVAGF Trigger: GAACCCAGCCACAGAAGACCATGCCAGCAACCTCAC...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTCCAGCACCTCTAGCTaGTCGAGCAGGCACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLSSTSS*SSRHSG Trigger: CCCACTGTGCCTGCTCGAGCAGCTAGAGGTGCTGGA...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCAAGCGTGGGCACAGCTaGAGGTACCGCATCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFKRGHS*RYRICP Trigger: GGGGCAGATGCGGTACCTGCAGCTGTGCCCACGCTT...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGAAGCGTGGGCACAGCTaGAGGTACCGCATCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWKRGHS*RYRICP Trigger: GGGGCAGATGCGGTACCTGCAGCTGTGCCCACGCTT...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGAGGTCATCTACCTaGGCCAGGGCCTGCAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLWRSST*ARACSR Trigger: TCGACTGCAGGCCCTGGCCCAGGTAGATGACCTCCA...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGGAGCATGGCCAAGCGTaGGCACAGCTGCAGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWEHGQA*AQLQVP Trigger: CGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTC...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGCGAATGGTGGCTCCATaGGGATCATCCAGCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLRMVAP*GSSSRG Trigger: CCCTCGGCTGGATGATCCCCATGGAGCCACCATTCG...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGGACAAGGCCCATGGCTaGGTCTCAGGCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLDKAHG*VSGTGK Trigger: CTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTGTC...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GACGCCTCCAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGTTTCCGAAGGCCTTTaGTGGGGTTCCCACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DASRALKAVTAANLSPRTVSEGL*WGSHRE Trigger: TTCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAAC...TGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTGGAGGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGTGCAGGGTCAGGCCTTaGGGTGGAGGGTCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWCRVRP*GGGSDG Trigger: GCCATCAGACCCTCCACCCCAAGGCCTGACCCTGCA...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR CCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCTGCAGGGTCAGGCCTTaGGGTGGAGGGTCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFCRVRP*GGGSDG Trigger: GCCATCAGACCCTCCACCCCAAGGCCTGACCCTGCA...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAATACAGGATCCTTCTGTaGGTCCTGGGCTTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQYRILL*VLGLDL Trigger: CAGGTCCAAGCCCAGGACCCACAGAAGGATCCTGTA...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCTAGGCCCCAAGCTGCCCAGAACTCTAAGCCTACGTCCTCTGAAGGGCAGTACAGGATCCTTCTGTaGGTCCTGGGCTTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QARPQAAQNSKPTSSEGQYRILL*VLGLDL Trigger: CAGGTCCAAGCCCAGGACCCACAGAAGGATCCTGTA...CTGCCCTTCAGAGGACGTAGGCTTAGAGTTCTGGGCAGCTTGGGGCCTAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGCGTGCAGCTGGGGGATaGGCTTCTTTACCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLRAAGG*ASLPLL Trigger: GAGCAGAGGTAAAGAAGCTCATCCCCCAGCTGCACG...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGGACCAGGACCATGGGTaGGGTTGCTGGCATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLDQDHG*GCWHGL Trigger: AAGACCATGCCAGCAACCTCACCCATGGTCCTGGTC...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGATCTCCCCAAGGAGCTaGTGCCTGACTCAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLISPRS*CLTQVA Trigger: TGCCACCTGAGTCAGGCATCAGCTCCTTGGGGAGAT...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR GCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCTCCAGCACCTCTAGCTaGTCGAGCAGGCACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFSSTSS*SSRHSG Trigger: CCCACTGTGCCTGCTCGAGCAGCTAGAGGTGCTGGA...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGGGTCCTCCACATTGTTaGCCTCCAGGTCCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLGPPHC*PPGPAP Trigger: AGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACC...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACTCTGAAGGGCAGGTCTaGAGATCTCCCCAAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGYLKGPAPAPPTSLWPHSEGQV*RSPQGA Trigger: AGCTCCTTGGGGAGATCTGCAGACCTGCCCTTCAGA...GTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAACTCTTGTTTTGTGGGTaGGGGTTGTTTAGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQLLFCG*GLFRPC Trigger: GCAGGGCCTAAACAACCCCCACCCACAAAACAAGAG...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGACCCACCGCTCCCTATaGATATCCCCATGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWTHRSL*ISPWLP Trigger: GGGCAGCCATGGGGATATCCATAGGGAGCGGTGGGT...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGTGGAGGTCATCTACCTaGGCCAGGGCCTGCAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWWRSST*ARACSR Trigger: TCGACTGCAGGCCCTGGCCCAGGTAGATGACCTCCA...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCCGAATGGTGGCTCCATaGGGATCATCCAGCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFRMVAP*GSSSRG Trigger: CCCTCGGCTGGATGATCCCCATGGAGCCACCATTCG...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGGACAAGGCCCATGGCTaGGTCTCAGGCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWDKAHG*VSGTGK Trigger: CTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTGTC...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGTTTCCGAAGGCCTTTaGTGGGGTTCCCACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQVSEGL*WGSHRE Trigger: TTCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAAC...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAAACTCCAGCTGTCTTTaGAGAAGAGGACGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQNSSCL*RRGRRP Trigger: TGGCCTGCGTCCTCTTCTCCAAAGACAGCTGGAGTT...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR CCA 90 bp | GACGCCTCCAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGCAGATCTTTCCTGCTaGAACTCCAGCTGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DASRALKAVTAANLSPRTADLSC*NSSCLW Trigger: CCAAAGACAGCTGGAGTTCCAGCAGGAAAGATCTGC...TGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTGGAGGCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCGTGCAGCTGGGGGATaGGCTTCTTTACCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWRAAGG*ASLPLL Trigger: GAGCAGAGGTAAAGAAGCTCATCCCCCAGCTGCACG...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCTCCTGGGCTTGGACCTaGGCAGATCTTTCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFSWAWT*ADLSCW Trigger: CCAGCAGGAAAGATCTGCTCAGGTCCAAGCCCAGGA...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATGGAGAAGGGATCAAATaGAAGCCTGATGTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDGEGIK*KPDVLE Trigger: TTCCAGGACATCAGGCTTTCATTTGATCCCTTCTCC...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCATCTCCCCAAGGAGCTaGTGCCTGACTCAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFISPRS*CLTQVA Trigger: TGCCACCTGAGTCAGGCATCAGCTCCTTGGGGAGAT...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGTTACACTAAGGGAGAGAATGGGCTGGAGGGATAGGGTTCAGGTGATGGGGTTGTTTAGGCCCTaGCAGCTCAGCTCCCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GKVTLRERMGWRDRVQVMGLFRP*QLSSRT Trigger: GGTACGGGAGCTGAGCTGGCAGGGCCTAAACAACCC...CATCACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCTTAGTGTAACCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTCCAAGAAGGAGCCAATaGCATCCAAGTCAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPPRRSQ*HPSQSG Trigger: GCCTGACTGACTTGGATGGCATTGGCTCCTTCTTGG...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTCTCTTGTTTTGTGGGTaGGGGTTGTTTAGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPLLFCG*GLFRPC Trigger: GCAGGGCCTAAACAACCCCCACCCACAAAACAAGAG...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATCTATGGATATCCCCATaGCTGCCCAGTCTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDLWISP*LPSLLF Trigger: AAACAAGAGACTGGGCAGCCATGGGGATATCCATAG...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GTACCGCATCTGCCCCAGGTCCTCCACATTGTTGCCCTCCAGGTCCAGCACCTCCTATGGATATCCCCATaGCTGCCCAGTCTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPHLPQVLHIVALQVQHLLWISP*LPSLLF Trigger: AAACAAGAGACTGGGCAGCCATGGGGATATCCATAG...GAGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGGGCAGATGCGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
||
| CDS-3UTR CCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCCTCGAGCAGGCACAGTaGGCTCAGGTCCGAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFLEQAQ*AQVRDV Trigger: AACATCTCGGACCTGAGCCCACTGTGCCTGCTCGAG...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCACCCCAAATTTCCGAATGGTaGCTCCATGGGGATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALKAVTAANLSPRTDPSPQISEW*LHGDHP Trigger: TGGATGATCCCCATGGAGCCACCATTCGGAAATTTG...GGGTGAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAACTCCAGCTGTCTTTaGAGAAGAGGACGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPNSSCL*RRGRRP Trigger: TGGCCTGCGTCCTCTTCTCCAAAGACAGCTGGAGTT...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGCAGATCTTTCCTGCTaGAACTCCAGCTGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQADLSC*NSSCLW Trigger: CCAAAGACAGCTGGAGTTCCAGCAGGAAAGATCTGC...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAAAGCCTGATGTCCTaGAAAGTTCTGAGACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQESLMS*KVLRPG Trigger: GCCTGGTCTCAGAACTTTCCAGGACATCAGGCTTTC...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGAGGGAGAGAATGGGCTaGAGGGATAGGGTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLRERMG*RDRVQV Trigger: CACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCT...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS-3UTR TCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCGCACGCTGCCTTCCTTaGTGGCTTCCTTCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFARCLP*WLPSPS Trigger: TGATGGTGAAGGAAGCCATCAAGGAAGGCAGCGTGC...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGCTTCTTTACCTCTaGTCTGTAGTTGTAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQELLYL*SVVVAL Trigger: CAGGGCTACAACTACAGAGCAGAGGTAAAGAAGCTC...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTATGGTCTTCTGTGGCTaGGTTCTCAGAAAGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPMVFCG*VLRKQT Trigger: GGTCTGCTTTCTGAGAACCCAGCCACAGAAGACCAT...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGGTTTCCGAAGGCCTTTaGTGGGGTTCCCACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLVSEGL*WGSHRE Trigger: TTCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAAC...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | CTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACGGAGAAGGGATCAAATaGAAGCCTGATGTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGYLKGPAPAPPTSLWPHGEGIK*KPDVLE Trigger: TTCCAGGACATCAGGCTTTCATTTGATCCCTTCTCC...GTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCAAGAAGGAGCCAATaGCATCCAAGTCAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWPRRSQ*HPSQSG Trigger: GCCTGACTGACTTGGATGGCATTGGCTCCTTCTTGG...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTATGGATATCCCCATaGCTGCCCAGTCTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGYLKGPAPAPPTSLWPHLWISP*LPSLLF Trigger: AAACAAGAGACTGGGCAGCCATGGGGATATCCATAG...GTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CTCACCCAGGCTAGGCCCCAAGCTGCCCAGAACTCTAAGCCTACGTCCTCTGAACTATGGATATCCCCATaGCTGCCCAGTCTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTQARPQAAQNSKPTSSELWISP*LPSLLF Trigger: AAACAAGAGACTGGGCAGCCATGGGGATATCCATAG...TTCAGAGGACGTAGGCTTAGAGTTCTGGGCAGCTTGGGGCCTAGCCTGGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTTGGTTCAGCTTCAGTTaGATCAGGTTAGGGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GISKGSSPSSTYFTVAPPWFSFS*IRLGRY Trigger: GTACCTCCCTAACCTGATCCAACTGAAGCTGAACCA...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGATGGTCTTCTGTGGCTaGGTTCTCAGAAAGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLMVFCG*VLRKQT Trigger: GGTCTGCTTTCTGAGAACCCAGCCACAGAAGACCAT...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGTTACACTAAGGGAGAGAATGGGCTGGAGGGATAGGGTTCAGGTGATGGTGAGGTTGCTGGCATaGTCTTCTGTGGCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKVTLRERMGWRDRVQVMVRLLA*SSVAGF Trigger: GAACCCAGCCACAGAAGACCATGCCAGCAACCTCAC...CATCACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCTTAGTGTAACCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGGCAGATCTTTCCTGCTaGAACTCCAGCTGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLADLSC*NSSCLW Trigger: CCAAAGACAGCTGGAGTTCCAGCAGGAAAGATCTGC...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATTTTGGAGAAGAGGACTaGTACTGGTTTCTACGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDFGEED*YWFLRF Trigger: GAAACGTAGAAACCAGTACCAGTCCTCTTCTCCAAA...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGGGAGAAGGGATCAAATaGAAGCCTGATGTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLGEGIK*KPDVLE Trigger: TTCCAGGACATCAGGCTTTCATTTGATCCCTTCTCC...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATAGAGCATGGCCAAGCGTaGGCACAGCTGCAGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: DACAILNPRISRLRIWAIEHGQA*AQLQVP Trigger: CGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTC...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGCAAATTTCCGAATGGTaGCTCCATGGGGATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLQISEW*LHGDHP Trigger: TGGATGATCCCCATGGAGCCACCATTCGGAAATTTG...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGGAAAGCCTGATGTCCTaGAAAGTTCTGAGACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWESLMS*KVLRPG Trigger: GCCTGGTCTCAGAACTTTCCAGGACATCAGGCTTTC...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR GCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCGAGCTTCTTTACCTCTaGTCTGTAGTTGTAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFELLYL*SVVVAL Trigger: CAGGGCTACAACTACAGAGCAGAGGTAAAGAAGCTC...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCCAAATTTCCGAATGGTaGCTCCATGGGGATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MTQSPGISKGSSPSSTYFQISEW*LHGDHP Trigger: TGGATGATCCCCATGGAGCCACCATTCGGAAATTTG...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGGTTACACTAAGGGAGAGAATGGGCTGGAGGGATAGGGTTCAGGTGATGGAAAGCCTGATGTCCTaGAAAGTTCTGAGACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKVTLRERMGWRDRVQVMESLMS*KVLRPG Trigger: GCCTGGTCTCAGAACTTTCCAGGACATCAGGCTTTC...CATCACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCTTAGTGTAACCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR TCA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATATTGGGGTGGAGGGTCTaGTGGCCAGATCTGGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: DACAILNPRISRLRIWAILGWRV*WPDLAY Trigger: ATAGGCCAGATCTGGCCATCAGACCCTCCACCCCAA...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR GCA 90 bp | GGGAAGGTTACACTAAGGGAGAGAATGGGCTGGAGGGATAGGGTTCAGGTGATGGAGCTTCTTTACCTCTaGTCTGTAGTTGTAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKVTLRERMGWRDRVQVMELLYL*SVVVAL Trigger: CAGGGCTACAACTACAGAGCAGAGGTAAAGAAGCTC...CATCACCTGAACCCTATCCCTCCAGCCCATTCTCTCCCTTAGTGTAACCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATACTCGAGCAGGCACAGTaGGCTCAGGTCCGAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: DACAILNPRISRLRIWAILEQAQ*AQVRDV Trigger: AACATCTCGGACCTGAGCCCACTGTGCCTGCTCGAG...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATATGCTGGCTTTGGGTCTaGACATCCCTGGGCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: DACAILNPRISRLRIWAICWLWV*TSLGSM Trigger: CATCGAGCCCAGGGATGTCCAGACCCAAAGCCAGCA...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR GCA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACACCTGGGCCAGGGCCTaGAGTCGAGCAGGGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKHISAYLRVENDSLGFYTWARA*SRAGDR Trigger: CCTATCCCCTGCTCGACTGCAGGCCCTGGCCCAGGT...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACGCCAGCCACAGCACCTaGAGGTGGCCCAGCGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKHISAYLRVENDSLGFYASHST*RWPSEV Trigger: CACTTCGCTGGGCCACCTGCAGGTGCTGTGGCTGGC...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATATACAGGATCCTTCTGTaGGTCCTGGGCTTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DACAILNPRISRLRIWAIYRILL*VLGLDL Trigger: CAGGTCCAAGCCCAGGACCCACAGAAGGATCCTGTA...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATGGGTCTGGACATCCCTaGGCTCGATGGCTGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISAYLRVENDSLGFYRGYGSGHP*ARWLGP Trigger: AGGCCCCAGCCATCGAGCCCAGGGATGTCCAGACCC...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR CCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATACCCACCGCTCCCTATaGATATCCCCATGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISAYLRVENDSLGFYRGYTHRSL*ISPWLP Trigger: GGGCAGCCATGGGGATATCCATAGGGAGCGGTGGGT...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR TCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATTCCTGGGCTTGGACCTaGGCAGATCTTTCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISAYLRVENDSLGFYRGYSWAWT*ADLSCW Trigger: CCAGCAGGAAAGATCTGCTCAGGTCCAAGCCCAGGA...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATGGTCCTCCACATTGTTaGCCTCCAGGTCCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ISAYLRVENDSLGFYRGYGPPHC*PPGPAP Trigger: AGGTGCTGGACCTGGAGGGCAACAATGTGGAGGACC...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACTGCAGGTACCGCATCTaGCCCAGGTCCTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: VKHISAYLRVENDSLGFYCRYRI*PRSSTL Trigger: CAATGTGGAGGACCTGGGGCAGATGCGGTACCTGCA...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATATGGTTCAGCTTCAGTTaGATCAGGTTAGGGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DACAILNPRISRLRIWAIWFSFS*IRLGRY Trigger: GTACCTCCCTAACCTGATCCAACTGAAGCTGAACCA...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACCCCGAAGCCCAGTCATaGCCAGGTCACAGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKHISAYLRVENDSLGFYPEAQS*PGHSFL Trigger: CAGAAAGCTGTGACCTGGCCATGACTGGGCTTCGGG...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR CCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATTGCTGGCTTTGGGTCTaGACATCCCTGGGCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISAYLRVENDSLGFYRGYCWLWV*TSLGSM Trigger: CATCGAGCCCAGGGATGTCCAGACCCAAAGCCAGCA...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR CCA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACGGAAGGGCCAGGATCTaGCTTCAGGCACACCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VKHISAYLRVENDSLGFYGRARI*LQAHQI Trigger: AATCTGGTGTGCCTGAAGCCAGATCCTGGCCCTTCC...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACGTGAGGTTGCTGGCATaGTCTTCTGTGGCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKHISAYLRVENDSLGFYVRLLA*SSVAGF Trigger: GAACCCAGCCACAGAAGACCATGCCAGCAACCTCAC...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATCCAAGAAGGAGCCAATaGCATCCAAGTCAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISAYLRVENDSLGFYRGYPRRSQ*HPSQSG Trigger: GCCTGACTGACTTGGATGGCATTGGCTCCTTCTTGG...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACGGATATCCCCATGGCTaGCCAGTCTCTTGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKHISAYLRVENDSLGFYGYPHG*PVSCFV Trigger: CACAAAACAAGAGACTGGGCAGCCATGGGGATATCC...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATATGGTCTTCTGTGGCTaGGTTCTCAGAAAGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ISAYLRVENDSLGFYRGYMVFCG*VLRKQT Trigger: GGTCTGCTTTCTGAGAACCCAGCCACAGAAGACCAT...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CCA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATAACTCCAGCTGTCTTTaGAGAAGAGGACTGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ISAYLRVENDSLGFYRGYNSSCL*RRGLVL Trigger: CAGTACCAGTCCTCTTCTCCAAAGACAGCTGGAGTT...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS GCA 90 bp | TCCAGCACCCTCACCAGTTGGAGGTCATCTACCTGGGCCAGGGCCTaGAGTCGAGCAGGGGATAGGCGCTCCTCCACCCACCGCTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSTLTSWRSSTWARA*SRAGDRRSSTHRSL Trigger: TAGGGAGCGGTGGGTGGAGGAGCGCCTATCCCCTGCTCGACTGCAGGCCCTGGCCCAGGTAGATGACCTCCAACTGGTGAGGGTGCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 |
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| CDS GCA 90 bp | CTCCGTCCAAGCCCGAAGCCCAGTCATGGCCAGGTCACAGCTTTCTaGAGGGTCAGGCCTTGGGGTGGAGGGTCTGATGGCCAGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPSPKPSHGQVTAF*RVRPWGGGSDGQIW Trigger: CCAGATCTGGCCATCAGACCCTCCACCCCAAGGCCTGACCCTGCAGAAAGCTGTGACCTGGCCATGACTGGGCTTCGGGCTTGGACGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS CCA 90 bp | AGCACGCTGCCTTCCTTGATGGCTTCCTTCACCATCAGCCAGTCCTaGCTCAGCGTCTGGGGCGCAGGCGCACTGGTGCATGTAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: STLPSLMASFTISQS*LSVWGAGALVHVVG Trigger: GCCCACTACATGCACCAGTGCGCCTGCGCCCCAGACGCTGAGCCAGGACTGGCTGATGGTGAAGGAAGCCATCAAGGAAGGCAGCGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCACCCCCCAGGTCCTCCACATaGTTGCCCTCCAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALKAVTAANLSPRTDPSPPRSST*LPSRSS Trigger: GCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGG...GGGTGAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS TCA 90 bp | AAGGGCCAGGATCTGGCTTCAGGCACACCAGATTCCCCTCCAGTGTaGGCATGGCCAAGCGTGGGCACAGCTGCAGGTACCGCATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGQDLASGTPDSPPV*AWPSVGTAAGTASA Trigger: GGCAGATGCGGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTCACACTGGAGGGGAATCTGGTGTGCCTGAAGCCAGATCCTGGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGAGATAGGTCCTCCACATTGTaGCCCTCCAGGTCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPSSTYFTVAPPRPRDRSSTL*PSRSST Trigger: GGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCT...ATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCACCCAGGTCCTCCACATTGTaGCCCTCCAGGTCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ALKAVTAANLSPRTDPSPRSSTL*PSRSST Trigger: GGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCT...GGGTGAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | CCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGCCCTGGGGCGCCTTGTaGGAAGGGCCAGGATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRVLGYLKGPAPAPPTSLPWGAL*EGPGSG Trigger: GCCAGATCCTGGCCCTTCCAACAAGGCGCCCCAGGG...CAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 90 bp | ACCTTCAGGCAAGGGGCCCCCAGGGACCAGCAGGGACAAGGCCCATaGCTGGGTCTCAGGCACAGGCAAGGTTGGGTCAAATTTCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TFRQGAPRDQQGQGP*LGLRHRQGWVKFPN Trigger: ATTCGGAAATTTGACCCAACCTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTGTCCCTGCTGGTCCCTGGGGGCCCCTTGCCTGAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 90 bp | AAGCCCAGTCATGGCCAGGTCACAGCTTTCTGCAGGGTCAGGCCTTaGGGTGGAGGGTCTGATGGCCAGATCTGGCCTATGTGGGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KPSHGQVTAFCRVRP*GGGSDGQIWPMWGH Trigger: ATGCCCCCACATAGGCCAGATCTGGCCATCAGACCCTCCACCCCAAGGCCTGACCCTGCAGAAAGCTGTGACCTGGCCATGACTGGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR CAA 90 bp | ATGCCATCCAAGTCAGTCAGGCCACAGCGAGCCAGCCACAGCACCTGCAGGTGGTTTTGTGGGTGGGGGTaGTTTAGGCCCTGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MPSKSVRPQRASHSTCRWFCGWG*FRPCQL Trigger: GAGCTGGCAGGGCCTAAACAACCCCCACCCACAAAA...CCACCTGCAGGTGCTGTGGCTGGCTCGCTGTGGCCTGACTGACTTGGATGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209220.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCGGACCATGGGTGAGGTaGCTGGCATGGTCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSQGSHCSQPLTQDRPLGPWVR*LAWSSV Trigger: CACAGAAGACCATGCCAGCAACCTCACCCATGGTCC...GAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | CAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCCGTTTCCGAAGGCCTTaGGTGGGGTTCCCACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGSQGSHCSQPLTQDRPLRFRRP*VGFPQR Trigger: TCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAACG...GAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS GCA 90 bp | TGGCTGCCCAGTCTCTTGTTTTGTGGGTGGGGGTTGTTTAGGCCCTaGCAGCTCAGCTCCCGTACCCGGATACTAGCTGTGCCTGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: WLPSLLFCGWGLFRP*QLSSRTRILAVPGR Trigger: TCGACCAGGCACAGCTAGTATCCGGGTACGGGAGCTGAGCTGGCAGGGCCTAAACAACCCCCACCCACAAAACAAGAGACTGGGCAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 ENSMUST00000209220.2 |
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| CDS GCA 90 bp | CACCTCGTCAAGGACGTGCAGCTGGGGGATGAGCTTCTTTACCTCTaGTCTGTAGTTGTAGCCCTGGGGCGCCTTGTTGGAAGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLVKDVQLGDELLYL*SVVVALGRLVGRAR Trigger: CCTGGCCCTTCCAACAAGGCGCCCCAGGGCTACAACTACAGAGCAGAGGTAAAGAAGCTCATCCCCCAGCTGCACGTCCTTGACGAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 90 bp | CTGTTCTTACGGGTGTCCACACACATCTCCAGCACCCTCACCAGTTaGAGGTCATCTACCTGGGCCAGGGCCTGCAGTCGAGCAGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFLRVSTHISSTLTS*RSSTWARACSRAGD Trigger: ATCCCCTGCTCGACTGCAGGCCCTGGCCCAGGTAGATGACCTCCAACTGGTGAGGGTGCTGGAGATGTGTGTGGACACCCGTAAGAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 |
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| CDS CCA 90 bp | CAGCAGGGACAAGGCCCATGGCTGGGTCTCAGGCACAGGCAAGGTTaGGTCAAATTTCCGAATGGTGGCTCCATGGGGATCATCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QQGQGPWLGLRHRQG*VKFPNGGSMGIIQP Trigger: CGGCTGGATGATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTGTCCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | CAGGCTAGGCCCCAAGCTGCCCAGAACTCTAAGCCTACGTCCTCTGAAGGGCAGTTTTGTGGGTGGGGGTaGTTTAGGCCCTGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QARPQAAQNSKPTSSEGQFCGWG*FRPCQL Trigger: GAGCTGGCAGGGCCTAAACAACCCCCACCCACAAAA...CTGCCCTTCAGAGGACGTAGGCTTAGAGTTCTGGGCAGCTTGGGGCCTAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCCCCAGGTCCTCCACATaGTTGCCCTCCAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MTQSPGISKGSSPSSTYFPRSST*LPSRSS Trigger: GCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGG...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGTTCCCACAGAGAACTaGACCAGGACCATGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQVPTEN*TRTMGE Trigger: CTCACCCATGGTCCTGGTCAAGTTCTCTGTGGGAAC...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTCGTTTCCGAAGGCCTTaGGTGGGGTTCCCACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GISKGSSPSSTYFTVAPPRFRRP*VGFPQR Trigger: TCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAACG...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | GGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTGAACTCCAGCTGTCTTaGGAGAAGAGGACGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GISKGSSPSSTYFTVAPPELQLS*EKRTQA Trigger: GGCCTGCGTCCTCTTCTCCAAAGACAGCTGGAGTTC...AGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR CAA 90 bp | CAGGGCTCTCAAGGCAGTCACTGCAGCCAACCTCTCACCCAGGACAGACCCCTCGAACTCCAGCTGTCTTaGGAGAAGAGGACTGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: QGSQGSHCSQPLTQDRPLELQLS*EKRTGT Trigger: AGTACCAGTCCTCTTCTCCAAAGACAGCTGGAGTTC...GAGGGGTCTGTCCTGGGTGAGAGGTTGGCTGCAGTGACTGCCTTGAGAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
||
| CDS CCA 90 bp | TCAGGCACAGGCAAGGTTGGGTCAAATTTCCGAATGGTGGCTCCATaGGGATCATCCAGCCGAGGGAGGAGAATGTCAAGCACGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGTGKVGSNFRMVAP*GSSSRGRRMSSTLP Trigger: AGGCAGCGTGCTTGACATTCTCCTCCCTCGGCTGGATGATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCCTGTGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 90 bp | GCTGGGTCTCAGGCACAGGCAAGGTTGGGTCAAATTTCCGAATGGTaGCTCCATGGGGATCATCCAGCCGAGGGAGGAGAATGTCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSQAQARLGQISEW*LHGDHPAEGGECQA Trigger: TGCTTGACATTCTCCTCCCTCGGCTGGATGATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCCTGTGCCTGAGACCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGTTTTGTGGGTGGGGGTaGTTTAGGCCCTGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWFCGWG*FRPCQL Trigger: GAGCTGGCAGGGCCTAAACAACCCCCACCCACAAAA...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | CTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGCCCCACCTAGGCCAAGTGGTTCAGCTTCAGTaGGATCAGGTTAGGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LKGPAPAPPTSLWPHLGQVVQLQ*DQVREV Trigger: TACCTCCCTAACCTGATCCAACTGAAGCTGAACCAC...TTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGGGACCATGGGTGAGGTaGCTGGCATGGTCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWGPWVR*LAWSSV Trigger: CACAGAAGACCATGCCAGCAACCTCACCCATGGTCC...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCGGACCATGGGTGAGGTaGCTGGCATGGTCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MTQSPGISKGSSPSSTYFGPWVR*LAWSSV Trigger: CACAGAAGACCATGCCAGCAACCTCACCCATGGTCC...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | ATGACCCAGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCCGTTTCCGAAGGCCTTaGGTGGGGTTCCCACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: MTQSPGISKGSSPSSTYFRFRRP*VGFPQR Trigger: TCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAACG...GAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCTGGGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS TCA 90 bp | CCTGACTCAGGTGGCATTGGGTACTTTGGGGGAGAAGGGATCAAATaGAAGCCTGATGTCCTGGAAAGTTCTGAGACCAGGCGTGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDSGGIGYFGGEGIK*KPDVLESSETRRGG Trigger: CCCGCCACGCCTGGTCTCAGAACTTTCCAGGACATCAGGCTTTCATTTGATCCCTTCTCCCCCAAAGTACCCAATGCCACCTGAGTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS TCA 90 bp | TCCTCTGAAGGGCAGGTCTGCAGATCTCCCCAAGGAGCTGATGCCTaGCTCAGGTGGCATTGGGTACTTTGGGGGAGAAGGGATCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: SSEGQVCRSPQGADA*LRWHWVLWGRRDQM Trigger: CATTTGATCCCTTCTCCCCCAAAGTACCCAATGCCACCTGAGTCAGGCATCAGCTCCTTGGGGAGATCTGCAGACCTGCCCTTCAGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS GCA 90 bp | TCTGATGGCCAGATCTGGCCTATGTGGGGGCATCTGTTCCAGGGGTaGCCATTCCTGGTACTGGTTTCTACGTTTCCGAAGGCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SDGQIWPMWGHLFQG*PFLVLVSTFPKAFG Trigger: ACCAAAGGCCTTCGGAAACGTAGAAACCAGTACCAGGAATGGGCACCCCTGGAACAGATGCCCCCACATAGGCCAGATCTGGCCATCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
||
| CDS CCA 90 bp | ATGGCTGGGTCTCAGGCACAGGCAAGGTTGGGTCAAATTTCCGAATaGTGGCTCCATGGGGATCATCCAGCCGAGGGAGGAGAATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: MAGSQAQARLGQISE*WLHGDHPAEGGECQ Trigger: TTGACATTCTCCTCCCTCGGCTGGATGATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCCTGTGCCTGAGACCCAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATACCCTGGGGCGCCTTGTaGGAAGGGCCAGGATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DACAILNPRISRLRIWAIPWGAL*EGPGSG Trigger: GCCAGATCCTGGCCCTTCCAACAAGGCGCCCCAGGG...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGGTTCCCACAGAGAACTaGACCAGGACCATGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWVPTEN*TRTMGE Trigger: CTCACCCATGGTCCTGGTCAAGTTCTCTGTGGGAAC...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 90 bp | TTGGGTACTTTGGGGGAGAAGGGATCAAATGAAAGCCTGATGTCCTaGAAAGTTCTGAGACCAGGCGTGGCGGGGTTAGGGAAGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGTLGEKGSNESLMS*KVLRPGVAGLGKSW Trigger: CCAAGACTTCCCTAACCCCGCCACGCCTGGTCTCAGAACTTTCCAGGACATCAGGCTTTCATTTGATCCCTTCTCCCCCAAAGTACCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATACCCAGGTCCTCCACATaGTTGCCCTCCAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DACAILNPRISRLRIWAIPRSST*LPSRSS Trigger: GCTGGACCTGGAGGGCAACAATGTGGAGGACCTGGG...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | AGAGTCCTGGGATATCTAAAGGGTCCAGCCCCAGCTCCACCTACTTCACTGTGGGTGGCATTGGGTACTTaGGGGGAGAAGGGATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVLGYLKGPAPAPPTSLWVALGT*GEKGSN Trigger: ATTTGATCCCTTCTCCCCCAAAGTACCCAATGCCAC...CCACAGTGAAGTAGGTGGAGCTGGGGCTGGACCCTTTAGATATCCCAGGACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS-3UTR CAA 90 bp | CCCCACCTAGGCCAAGAGATATCAGCAAGGGAAGGTTACACTAAGGGAGAGAATGTTCCCACAGAGAACTaGACCAGGACCATGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PHLGQEISAREGYTKGENVPTEN*TRTMGE Trigger: CTCACCCATGGTCCTGGTCAAGTTCTCTGTGGGAAC...ATTCTCTCCCTTAGTGTAACCTTCCCTTGCTGATATCTCTTGGCCTAGGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATAGAACTCCAGCTGTCTTaGGAGAAGAGGACGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DACAILNPRISRLRIWAIELQLS*EKRTQA Trigger: GGCCTGCGTCCTCTTCTCCAAAGACAGCTGGAGTTC...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS-3UTR CAA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGGTCCTCCACATTGTaGCCCTCCAGGTCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VKHISAYLRVENDSLGFYRSSTL*PSRSST Trigger: GGTGCTGGACCTGGAGGGCAACAATGTGGAGGACCT...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GATGCTTGCGCAATTTTGAACCCTAGGATAAGCAGGCTCAGAATTTGGGCCATAGTGGCATTGGGTACTTaGGGGGAGAAGGGATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: DACAILNPRISRLRIWAIVALGT*GEKGSN Trigger: ATTTGATCCCTTCTCCCCCAAAGTACCCAATGCCAC...TATGGCCCAAATTCTGAGCCTGCTTATCCTAGGGTTCAAAATTGCGCAAGCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACTTTTGTGGGTGGGGGTaGTTTAGGCCCTGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VKHISAYLRVENDSLGFYFCGWG*FRPCQL Trigger: GAGCTGGCAGGGCCTAAACAACCCCCACCCACAAAA...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | ATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACAGAGGGTATTGGCTGCCCAGTCTCTaGTTTTGTGGGTGGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISAYLRVENDSLGFYRGYWLPSL*FCGWGL Trigger: CAACCCCCACCCACAAAACAAGAGACTGGGCAGCCA...ATACCCTCTGTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACGTGGTTCAGCTTCAGTaGGATCAGGTTAGGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VKHISAYLRVENDSLGFYVVQLQ*DQVREV Trigger: TACCTCCCTAACCTGATCCAACTGAAGCTGAACCAC...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS-3UTR CAA 90 bp | GTAAAGCACATTTCTGCATACCTGAGAGTTGAAAATGATTCGCTTGGCTTTTACGTGGCATTGGGTACTTaGGGGGAGAAGGGATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VKHISAYLRVENDSLGFYVALGT*GEKGSN Trigger: ATTTGATCCCTTCTCCCCCAAAGTACCCAATGCCAC...GTAAAAGCCAAGCGAATCATTTTCAACTCTCAGGTATGCAGAAATGTGCTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 72 bp | CCAGCTCAGCTCCCGTACCCGGATACTAGCTGTGCCTaGTCGAGACCCCTGGGATCCATCCCAGGCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PAQLPYPDTSCA*SRPLGSIPGWV Trigger: GACCCAGCCTGGGATGGATCCCAGGGGTCTCGACCAGGCACAGCTAGTATCCGGGTACGGGAGCTGAGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 ENSMUST00000209220.2 |
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| CDS CCA 72 bp | CAAGGGGCCCCCAGGGACCAGCAGGGACAAGGCCCATaGCTGGGTCTCAGGCACAGGCAAGGTTGGGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QGAPRDQQGQGP*LGLRHRQGWVK Trigger: TTTGACCCAACCTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTGTCCCTGCTGGTCCCTGGGGGCCCCTTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS GCA 72 bp | AGCCCGAAGCCCAGTCATGGCCAGGTCACAGCTTTCTaGAGGGTCAGGCCTTGGGGTGGAGGGTCTGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPKPSHGQVTAF*RVRPWGGGSDG Trigger: GCCATCAGACCCTCCACCCCAAGGCCTGACCCTGCAGAAAGCTGTGACCTGGCCATGACTGGGCTTCGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS CCA 72 bp | CGGGTGTCCACACACATCTCCAGCACCCTCACCAGTTaGAGGTCATCTACCTGGGCCAGGGCCTGCAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RVSTHISSTLTS*RSSTWARACSR Trigger: TCGACTGCAGGCCCTGGCCCAGGTAGATGACCTCCAACTGGTGAGGGTGCTGGAGATGTGTGTGGACACCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 |
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| CDS CCA 72 bp | CCTTCCTTGATGGCTTCCTTCACCATCAGCCAGTCCTaGCTCAGCGTCTGGGGCGCAGGCGCACTGGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PSLMASFTISQS*LSVWGAGALVH Trigger: ATGCACCAGTGCGCCTGCGCCCCAGACGCTGAGCCAGGACTGGCTGATGGTGAAGGAAGCCATCAAGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CAA 72 bp | CCATGGCTGCCCAGTCTCTTGTTTTGTGGGTGGGGGTaGTTTAGGCCCTGCCAGCTCAGCTCCCGTACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PWLPSLLFCGWG*FRPCQLSSRTR Trigger: CCGGGTACGGGAGCTGAGCTGGCAGGGCCTAAACAACCCCCACCCACAAAACAAGAGACTGGGCAGCCATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 ENSMUST00000209220.2 |
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| CDS CAA 72 bp | ACGGGTGTCCACACACATCTCCAGCACCCTCACCAGTaGGAGGTCATCTACCTGGGCCAGGGCCTGCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: TGVHTHLQHPHQ*EVIYLGQGLQS Trigger: CGACTGCAGGCCCTGGCCCAGGTAGATGACCTCCAACTGGTGAGGGTGCTGGAGATGTGTGTGGACACCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 |
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| CDS CAA 90 bp | GCTGTTCTTACGGGTGTCCACACACATCTCCAGCACCCTCACCAGTaGGAGGTCATCTACCTGGGCCAGGGCCTGCAGTCGAGCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVLTGVHTHLQHPHQ*EVIYLGQGLQSSRG Trigger: TCCCCTGCTCGACTGCAGGCCCTGGCCCAGGTAGATGACCTCCAACTGGTGAGGGTGCTGGAGATGTGTGTGGACACCCGTAAGAACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 |
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| CDS TCA 72 bp | GATCTGGCTTCAGGCACACCAGATTCCCCTCCAGTGTaGGCATGGCCAAGCGTGGGCACAGCTGCAGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: DLASGTPDSPPV*AWPSVGTAAGT Trigger: GGTACCTGCAGCTGTGCCCACGCTTGGCCATGCTCACACTGGAGGGGAATCTGGTGTGCCTGAAGCCAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS CAA 90 bp | CCAGCAGGGACAAGGCCCATGGCTGGGTCTCAGGCACAGGCAAGGTaGGGTCAAATTTCCGAATGGTGGCTCCATGGGGATCATCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PAGTRPMAGSQAQAR*GQISEWWLHGDHPA Trigger: GGCTGGATGATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTGTCCCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS CCA 72 bp | CAAGGCCCATGGCTGGGTCTCAGGCACAGGCAAGGTTaGGTCAAATTTCCGAATGGTGGCTCCATGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: QGPWLGLRHRQG*VKFPNGGSMGI Trigger: GATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS CAA 90 bp | GCCCAGGTCTCTGAGGGAGCCCAGGTAGCTGTGGTTCAGCTTCAGTaGGATCAGGTTAGGGAGGTACAATCCGAAGTTCCCCAGGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AQVSEGAQVAVVQLQ*DQVREVQSEVPQAV Trigger: AACAGCCTGGGGAACTTCGGATTGTACCTCCCTAACCTGATCCAACTGAAGCTGAACCACAGCTACCTGGGCTCCCTCAGAGACCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS TCA 72 bp | TGGGGTTCCCACAGAGAACTTGACCAGGACCATGGGTaGGGTTGCTGGCATGGTCTTCTGTGGCTGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WGSHRELDQDHG*GCWHGLLWLGS Trigger: AGAACCCAGCCACAGAAGACCATGCCAGCAACCTCACCCATGGTCCTGGTCAAGTTCTCTGTGGGAACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
||
| CDS GCA 72 bp | AGTCTCTTGTTTTGTGGGTGGGGGTTGTTTAGGCCCTaGCAGCTCAGCTCCCGTACCCGGATACTAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SLLFCGWGLFRP*QLSSRTRILAV Trigger: CACAGCTAGTATCCGGGTACGGGAGCTGAGCTGGCAGGGCCTAAACAACCCCCACCCACAAAACAAGAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 ENSMUST00000144008.2 ENSMUST00000209220.2 |
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| CDS GCA 72 bp | AAGGACGTGCAGCTGGGGGATGAGCTTCTTTACCTCTaGTCTGTAGTTGTAGCCCTGGGGCGCCTTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KDVQLGDELLYL*SVVVALGRLVG Trigger: TCCAACAAGGCGCCCCAGGGCTACAACTACAGAGCAGAGGTAAAGAAGCTCATCCCCCAGCTGCACGTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 72 bp | CAGGCACAGGCAAGGTTGGGTCAAATTTCCGAATGGTaGCTCCATGGGGATCATCCAGCCGAGGGAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: QAQARLGQISEW*LHGDHPAEGGE Trigger: TTCTCCTCCCTCGGCTGGATGATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCCTGTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CAA 72 bp | ACAAGGCCCATGGCTGGGTCTCAGGCACAGGCAAGGTaGGGTCAAATTTCCGAATGGTGGCTCCATGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: TRPMAGSQAQAR*GQISEWWLHGD Trigger: ATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCCTGTGCCTGAGACCCAGCCATGGGCCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS GCA 72 bp | CAGATCTGGCCTATGTGGGGGCATCTGTTCCAGGGGTaGCCATTCCTGGTACTGGTTTCTACGTTTCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: QIWPMWGHLFQG*PFLVLVSTFPK Trigger: CTTCGGAAACGTAGAAACCAGTACCAGGAATGGGCACCCCTGGAACAGATGCCCCCACATAGGCCAGATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS CCA 72 bp | GGCAAGGTTGGGTCAAATTTCCGAATGGTGGCTCCATaGGGATCATCCAGCCGAGGGAGGAGAATGTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GKVGSNFRMVAP*GSSSRGRRMSS Trigger: GCTTGACATTCTCCTCCCTCGGCTGGATGATCCCCATGGAGCCACCATTCGGAAATTTGACCCAACCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 72 bp | CCTGGTACTGGTTTCTACGTTTCCGAAGGCCTTTGGTaGGGTTCCCACAGAGAACTTGACCAGGACCATGGG | + |
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Preference number: 6 (lower is better) Translates to: PGTGFYVSEGLW*GSHRELDQDHG Trigger: CCCATGGTCCTGGTCAAGTTCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAACGTAGAAACCAGTACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS CCA 72 bp | CTATGTGGGGGCATCTGTTCCAGGGGTGCCCATTCCTaGTACTGGTTTCTACGTTTCCGAAGGCCTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LCGGICSRGAHS*YWFLRFRRPLV Trigger: CACCAAAGGCCTTCGGAAACGTAGAAACCAGTACCAGGAATGGGCACCCCTGGAACAGATGCCCCCACATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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| CDS CCA 72 bp | TTGGGGGAGAAGGGATCAAATGAAAGCCTGATGTCCTaGAAAGTTCTGAGACCAGGCGTGGCGGGGTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: LGEKGSNESLMS*KVLRPGVAGLG Trigger: CCCTAACCCCGCCACGCCTGGTCTCAGAACTTTCCAGGACATCAGGCTTTCATTTGATCCCTTCTCCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 72 bp | TCCAGTCTGGTCTTCCTGTTCTACAGGATCCTTCTGTaGGTCCTGGGCTTGGACCTGAGCAGATCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSLVFLFYRILL*VLGLDLSRSFL Trigger: CAGGAAAGATCTGCTCAGGTCCAAGCCCAGGACCCACAGAAGGATCCTGTAGAACAGGAAGACCAGACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 72 bp | ACTGGTACTGGTTTCTACGTTTCCGAAGGCCTTTGGTaGGGTTCCCACAGAGAACTTGACCAGGACCATGGG | + |
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Preference number: 6 (lower is better) Translates to: TGTGFYVSEGLW*GSHRELDQDHG Trigger: CCCATGGTCCTGGTCAAGTTCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAACGTAGAAACCAGTACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS CAA 72 bp | TCTGAGGGAGCCCAGGTAGCTGTGGTTCAGCTTCAGTaGGATCAGGTTAGGGAGGTACAATCCGAAGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SEGAQVAVVQLQ*DQVREVQSEVP Trigger: GGGAACTTCGGATTGTACCTCCCTAACCTGATCCAACTGAAGCTGAACCACAGCTACCTGGGCTCCCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 72 bp | AGGACTGGTACTGGTTTCTACGTTTCCGAAGGCCTTTaGTGGGGTTCCCACAGAGAACTTGACCAGGACCAT | + |
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Preference number: 6 (lower is better) Translates to: RTGTGFYVSEGL*WGSHRELDQDH Trigger: ATGGTCCTGGTCAAGTTCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAACGTAGAAACCAGTACCAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS CCA 72 bp | GGAACTCCAGCTGTCTTTGGAGAAGAGGACTGGTACTaGTTTCTACGTTTCCGAAGGCCTTTGGTGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GTPAVFGEEDWY*FLRFRRPLVGF Trigger: GAACCCCACCAAAGGCCTTCGGAAACGTAGAAACCAGTACCAGTCCTCTTCTCCAAAGACAGCTGGAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084446.9 |
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| CDS TCA 72 bp | GGTGGCATTGGGTACTTTGGGGGAGAAGGGATCAAATaGAAGCCTGATGTCCTGGAAAGTTCTGAGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: GGIGYFGGEGIK*KPDVLESSETR Trigger: CCTGGTCTCAGAACTTTCCAGGACATCAGGCTTTCATTTGATCCCTTCTCCCCCAAAGTACCCAATGCCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 ENSMUST00000084446.9 |
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| CDS CCA 72 bp | ATTCCTGGTACTGGTTTCTACGTTTCCGAAGGCCTTTaGTGGGGTTCCCACAGAGAACTTGACCAGGACCAT | + |
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Preference number: 6 (lower is better) Translates to: IPGTGFYVSEGL*WGSHRELDQDH Trigger: ATGGTCCTGGTCAAGTTCTCTGTGGGAACCCCACCAAAGGCCTTCGGAAACGTAGAAACCAGTACCAGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047093.11 ENSMUST00000070458.11 |
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