Pregenerated sensors for LRRC55 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075224Ensembl transcript IDs: ENSMUST00000099930.9, ENSMUST00000111601.2, ENSMUST00000234267.3, ENSMUST00000234905.3
Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGTGGCTTTGTCCTCCTGCCCCGGTTACTGCCATGCTAGGATCTaGACCCTACAGTGCACTTTCCTGGTGAGTTCCTTTGGTGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: VVALSSCPGYCHARI*TLQCTFLVSSFGVS Trigger: GCTCACACCAAAGGAACTCACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCAGGAGGACAAAGCCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR GCA 90 bp | CCTGTGGGGATGAATGTGGTGGCTTTGTCCTCCTGCCCCGGTTACTaGCATGCTAGGATCTGCACCCTACAGTGCACTTTCCTGGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: PVGMNVVALSSCPGY*HARICTLQCTFLVS Trigger: ACTCACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCAGGAGGACAAAGCCACCACATTCATCCCCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | GGTCAAGGTGTCTGGCATGGAGGCTATCTCACTCCTAGAGGGCAGTaGCAGGCAGCAGTGGGAACTGAAAAATTGGGTGTCAGAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: GQGVWHGGYLTPRGQ*QAAVGTEKLGVRGR Trigger: TCTCCCTCTGACACCCAATTTTTCAGTTCCCACTGCTGCCTGCCACTGCCCTCTAGGAGTGAGATAGCCTCCATGCCAGACACCTTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | GTCCTTTCACTCCCCTTTCTGCTAATGGGAGAAGGTCAAGGTGTCTaGCATGGAGGCTATCTCACTCCTAGAGGGCAGTGGCAGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: VLSLPFLLMGEGQGV*HGGYLTPRGQWQAA Trigger: TGCTGCCTGCCACTGCCCTCTAGGAGTGAGATAGCCTCCATGCCAGACACCTTGACCTTCTCCCATTAGCAGAAAGGGGAGTGAAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR GCA 90 bp | TCCTCCTGCCCCGGTTACTGCCATGCTAGGATCTGCACCCTACAGTaGACTTTCCTGGTGAGTTCCTTTGGTGTGAGCACCATGGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SSCPGYCHARICTLQ*TFLVSSFGVSTMER Trigger: TCTTTCCATGGTGCTCACACCAAAGGAACTCACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR GCA 90 bp | CTGTTTAGATGTCACTTGTGGTGCCTCTGTTTCAGAGGCTGGAGTTaGCCCACTGGGAGCATAGTCTGTGCACAGCTGGGCTTTACTGCT | + |
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Preference number: 1 (lower is better) Translates to: LFRCHLWCLCFRGWS*PTGSIVCAQLGFTA Trigger: AGCAGTAAAGCCCAGCTGTGCACAGACTATGCTCCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACATCTAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | ATGTCACTTGTGGTGCCTCTGTTTCAGAGGCTGGAGTTGCCCCACTaGGAGCATAGTCTGTGCACAGCTGGGCTTTACTGCTGCCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: MSLVVPLFQRLELPH*EHSLCTAGLYCCLL Trigger: TAAAAGGCAGCAGTAAAGCCCAGCTGTGCACAGACTATGCTCCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | CGTCTTCTGTTTAGATGTCACTTGTGGTGCCTCTGTTTCAGAGGCTaGAGTTGCCCCACTGGGAGCATAGTCTGTGCACAGCTGGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: RLLFRCHLWCLCFRG*SCPTGSIVCAQLGF Trigger: AAAGCCCAGCTGTGCACAGACTATGCTCCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACATCTAAACAGAAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | GGCATGGAGGCTATCTCACTCCTAGAGGGCAGTGGCAGGCAGCAGTaGGAACTGAAAAATTGGGTGTCAGAGGGAGAGATTTACTTTTGC | + |
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Preference number: 1 (lower is better) Translates to: GMEAISLLEGSGRQQ*ELKNWVSEGEIYFC Trigger: GCAAAAGTAAATCTCTCCCTCTGACACCCAATTTTTCAGTTCCCACTGCTGCCTGCCACTGCCCTCTAGGAGTGAGATAGCCTCCATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | GAGTTCCTTTGGTGTGAGCACCATGGAAAGAACAGTCACATAAATTaGGGTCCCAGGGTGCCAAGACTTTTGCTGCCTCCTTGTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: EFLWCEHHGKNSHIN*GPRVPRLLLPPCEA Trigger: AGCCTCACAAGGAGGCAGCAAAAGTCTTGGCACCCTGGGACCCCAATTTATGTGACTGTTCTTTCCATGGTGCTCACACCAAAGGAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR GCA 90 bp | ATAGGGAAGCCTAAGCTTGGGCATCTGTTGCCTGTTGGAGGCCTTTaGTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCACCATATC | + |
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Preference number: 1 (lower is better) Translates to: IGKPKLGHLLPVGGL*LAISLWLRFHTHHI Trigger: GATATGGTGGGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAACAGATGCCCAAGCTTAGGCTTCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR GCA 90 bp | GGGCTTAGGAACACTGAGAGGTCTATGGACCCAACTCCCAACCAGTaGCATGATTTACAAAAGGTCCTTGGGTCTTGCCTCCTTTACTTC | + |
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Preference number: 1 (lower is better) Translates to: GLRNTERSMDPTPNQ*HDLQKVLGSCLLYF Trigger: GAAGTAAAGGAGGCAAGACCCAAGGACCTTTTGTAAATCATGGCACTGGTTGGGAGTTGGGTCCATAGACCTCTCAGTGTTCCTAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR GCA 90 bp | CATATACTGTTAAGGTGGCGTCTTCTGTTTAGATGTCACTTGTGGTaGCTCTGTTTCAGAGGCTGGAGTTGCCCCACTGGGAGCATAGTC | + |
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Preference number: 1 (lower is better) Translates to: HILLRWRLLFRCHLW*LCFRGWSCPTGSIV Trigger: GACTATGCTCCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACATCTAAACAGAAGACGCCACCTTAACAGTATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | GCTCATATACTGTTAAGGTGGCGTCTTCTGTTTAGATGTCACTTGTaGTGCCTCTGTTTCAGAGGCTGGAGTTGCCCCACTGGGAGCATA | + |
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Preference number: 1 (lower is better) Translates to: AHILLRWRLLFRCHL*CLCFRGWSCPTGSI Trigger: TATGCTCCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACATCTAAACAGAAGACGCCACCTTAACAGTATATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | GGCAAGAAGCTTAGCTTATGGAGACTAGCTAGAGTCTACCATTGTTaGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTCTATGT | + |
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Preference number: 1 (lower is better) Translates to: GKKLSLWRLARVYHC*PQLSGQGEQGIVLC Trigger: ACATAGAACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCTAGCTAGTCTCCATAAGCTAAGCTTCTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | TCACTCCTAGAGGGCAGTGGCAGGCAGCAGTGGGAACTGAAAAATTaGGTGTCAGAGGGAGAGATTTACTTTTGCACCTACTTCTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: SLLEGSGRQQWELKN*VSEGEIYFCTYFFY Trigger: ATAGAAGAAGTAGGTGCAAAAGTAAATCTCTCCCTCTGACACCCAATTTTTCAGTTCCCACTGCTGCCTGCCACTGCCCTCTAGGAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR TCA 90 bp | GAACAGCCTCTGAGGTCCCATTGCCCTAAAGAAGCTGAAGTTAGATaGCCTTTGACAGTCCTGCTGAGTGGTCCTATCATTTTCTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: EQPLRSHCPKEAEVR*PLTVLLSGPIIFSD Trigger: ATCTGAGAAAATGATAGGACCACTCAGCAGGACTGTCAAAGGTCATCTAACTTCAGCTTCTTTAGGGCAATGGGACCTCAGAGGCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR CCA 90 bp | AGCTTCCAGGGTCTGTTTTGGCTGATTAGATCAATGCAGATGAGTTaGATTACGACACGTTCCCCTTCTCCATGCATTGTAAGTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SFQGLFWLIRSMQMS*ITTRSPSPCIVSQL Trigger: CAGCTGACTTACAATGCATGGAGAAGGGGAACGTGTCGTAATCCAACTCATCTGCATTGATCTAATCAGCCAAAACAGACCCTGGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
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| 3UTR TCA 90 bp | AAGACGGTGAGCATTGTGTTTCCCACAGAGTCCTTGGCTTCTAACTaGTTAGATTCATATTTCCTCAGAGGAGTCACCTGTCATACTCTT | + |
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Preference number: 1 (lower is better) Translates to: KTVSIVFPTESLASN*LDSYFLRGVTCHTL Trigger: AAGAGTATGACAGGTGACTCCTCTGAGGAAATATGAATCTAATCAGTTAGAAGCCAAGGACTCTGTGGGAAACACAATGCTCACCGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CCA 90 bp | CCTCAGAGGAGTCACCTGTCATACTCTTTGTTCATGCAGATAATTTaGATAAGCATCCCAGCTCTCCACAATGAATTCAACTGGAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: PQRSHLSYSLFMQII*ISIPALHNEFNWKV Trigger: CACTTTCCAGTTGAATTCATTGTGGAGAGCTGGGATGCTTATCCAAATTATCTGCATGAACAAAGAGTATGACAGGTGACTCCTCTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR TCA 90 bp | TACCCAACCTTTAGCCTCTACTTTCCATTCTCCAGGACATCATCTTaGTTTGGTTCCCACACAGGAAGAGAATACAAAAGAAGCATCCTA | + |
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Preference number: 1 (lower is better) Translates to: YPTFSLYFPFSRTSS*FGSHTGREYKRSIL Trigger: TAGGATGCTTCTTTTGTATTCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATGGAAAGTAGAGGCTAAAGGTTGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR GCA 90 bp | CTCTCTGGCCTTCTTCCTGCAGACACATTCATGTGCACATATGCATaGTTTTACACACACATACACTCACATGGACACATAAAGAATTTT | + |
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Preference number: 1 (lower is better) Translates to: LSGLLPADTFMCTYA*FYTHIHSHGHIKNF Trigger: AAAATTCTTTATGTGTCCATGTGAGTGTATGTGTGTGTAAAAGCATGCATATGTGCACATGAATGTGTCTGCAGGAAGAAGGCCAGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR GCA 90 bp | CCCGACACTAGCAAGAACCAGCAATTAATAGCTATTCTTTCTTTATaGTCCAATGAACAAGTTACTAAGGAGAGAAGACATACCGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PDTSKNQQLIAILSL*SNEQVTKERRHTVL Trigger: CAGGACGGTATGTCTTCTCTCCTTAGTAACTTGTTCATTGGAGCATAAAGAAAGAATAGCTATTAATTGCTGGTTCTTGCTAGTGTCGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR TCA 90 bp | GTGCATGGAGAAAATGGAGCTCTTGACCTTTTTCAAAGGTTGGAATaGAATTCAAGTCCTGATCTCTTCAAATACATTACATCAAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: VHGENGALDLFQRLE*NSSPDLFKYITSSP Trigger: GGGGCTTGATGTAATGTATTTGAAGAGATCAGGACTTGAATTTCATTCCAACCTTTGAAAAAGGTCAAGAGCTCCATTTTCTCCATGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR TCA 90 bp | TTTCGGAGTATACAAAACAAGACAAGGTTCCCTAGCTTGGAGGAATaGACAAAGGTATCTTTTTGTGCTCTTCTACAGCTGGAAAGAATG | + |
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Preference number: 1 (lower is better) Translates to: FRSIQNKTRFPSLEE*TKVSFCALLQLERM Trigger: CATTCTTTCCAGCTGTAGAAGAGCACAAAAAGATACCTTTGTTCATTCCTCCAAGCTAGGGAACCTTGTCTTGTTTTGTATACTCCGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR TCA 90 bp | GGTCAGAGTAATGTGAGTTATTGTCACTGTTCTTTGAGTGCAGACTaGTGTTTTACACCCTTATTTGTGTCACATAGATCTACTCACGAA | + |
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Preference number: 1 (lower is better) Translates to: GQSNVSYCHCSLSAD*CFTPLFVSHRSTHE Trigger: TTCGTGAGTAGATCTATGTGACACAAATAAGGGTGTAAAACATCAGTCTGCACTCAAAGAACAGTGACAATAACTCACATTACTCTGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR TCA 90 bp | CTAGACAAATGGGCAGGGTGCTTATTTGTTTATCAACTTGATAACTaGGTGGACTGTGTTAGAGGTTTGAACCCAAGTTCTAAAGGAATA | + |
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Preference number: 1 (lower is better) Translates to: LDKWAGCLFVYQLDN*VDCVRGLNPSSKGI Trigger: TATTCCTTTAGAACTTGGGTTCAAACCTCTAACACAGTCCACTCAGTTATCAAGTTGATAAACAAATAAGCACCCTGCCCATTTGTCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR TCA 90 bp | TATTTGTTTATCAACTTGATAACTGAGTGGACTGTGTTAGAGGTTTaGACCCAAGTTCTAAAGGAATATTCTCCAAGTCAGTATACAACC | + |
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Preference number: 1 (lower is better) Translates to: YLFINLITEWTVLEV*TQVLKEYSPSQYTT Trigger: GGTTGTATACTGACTTGGAGAATATTCCTTTAGAACTTGGGTTCAAACCTCTAACACAGTCCACTCAGTTATCAAGTTGATAAACAAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR CCA 90 bp | AGTATGTGCATGGAGAAAATGGAGCTCTTGACCTTTTTCAAAGGTTaGAATGAAATTCAAGTCCTGATCTCTTCAAATACATTACATCAA | + |
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Preference number: 1 (lower is better) Translates to: SMCMEKMELLTFFKG*NEIQVLISSNTLHQ Trigger: TTGATGTAATGTATTTGAAGAGATCAGGACTTGAATTTCATTCCAACCTTTGAAAAAGGTCAAGAGCTCCATTTTCTCCATGCACATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCGGTTACTGCCATGCTAGGATCTGCACCCTACAGTGCACTTTCCTGGTGCAACTAGACTACAATTaGGAAGTCGCTGGGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: CPGYCHARICTLQCTFLVQLDYN*EVAGRS Trigger: GGACCTCCCAGCGACTTCCCAATTGTAGTCTAGTTG...CACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATACTGGGACTACCCAGATaGATCTCCCCATCTCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: ARVYHCWPQLSGQGEQGILGLPR*ISPSPV Trigger: AACAGGAGATGGGGAGATCCATCTGGGTAGTCCCAG...TATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGTATCTAGAGGACAACCATAGGGGCATGGTCCAGAATGGTGTGGTGCATTTGGCCACAGTTGAGTaGTCAGGGAGAGCAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: RWYLEDNHRGMVQNGVVHLATVE*SGRAGH Trigger: ATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAA...ATGCACCACACCATTCTGGACCATGCCCCTATGGTTGTCCTCTAGATACCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGTGTATGATGGATGCTTGCCAGGGTTGGAGCCAAGATAGAAAGCTCTTGGGGCATGGTCCAGAATaGTGTGGTGCATATGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: AGCMMDACQGWSQDRKLLGHGPE*CGAYVG Trigger: TCCCACATATGCACCACACCATTCTGGACCATGCCC...CAAGAGCTTTCTATCTTGGCTCCAACCCTGGCAAGCATCCATCATACACCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGTGTATGATGGATGCTTGCCAGGGTTGGAGCCAAGATAGAAAGCTCTTGTCTTCTTGGACTTTGTaGGGCACAGATGATGGACCC | + |
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Preference number: 2 (lower is better) Translates to: AGCMMDACQGWSQDRKLLSSWTL*GTDDGP Trigger: GGGTCCATCATCTGTGCCTCACAAAGTCCAAGAAGA...CAAGAGCTTTCTATCTTGGCTCCAACCCTGGCAAGCATCCATCATACACCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR GCA 90 bp | AAGCACTGGAAAGAGAACCCTGACAGAACTGAGTCTAGTCTTAGGCTGAAGGCACAGTTGCTAGCACAGTaGCTGGCCCAAAGTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: KHWKENPDRTESSLRLKAQLLAQ*LAQSGW Trigger: CCATCCACTTTGGGCCAGGCACTGTGCTAGCAACTG...TGCCTTCAGCCTAAGACTAGACTCAGTTCTGTCAGGGTTCTCTTTCCAGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTGAAGGTCAAGGTGTCTaGCATGGAGGCTATCTCACT | + |
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Preference number: 2 (lower is better) Translates to: RVYHCWPQLSGQGEQGIVEGQGV*HGGYLT Trigger: AGTGAGATAGCCTCCATGCCAGACACCTTGACCTTC...AACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CAA 90 bp | CCAAAGTGGATGGATGCTCATACAAAGTTAGCTTTCCAACCTTGTTaGAGCTATGATGGAGATGGCCAGGGCACCGTGATACAGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PKWMDAHTKLAFQPC*SYDGDGQGTVIQGV Trigger: GACACCCTGTATCACGGTGCCCTGGCCATCTCCATCATAGCTCAAACAAGGTTGGAAAGCTAACTTTGTATGAGCATCCATCCACTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CAA 90 bp | CTCACTCCTAGAGGGCAGTGGCAGGCAGCAGTGGGAACTGAAAAATaGGGTGTCAGAGGGAGAGATTTACTTTTGCACCTACTTCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LTPRGQWQAAVGTEK*GVRGRDLLLHLLLL Trigger: TAGAAGAAGTAGGTGCAAAAGTAAATCTCTCCCTCTGACACCCAATTTTTCAGTTCCCACTGCTGCCTGCCACTGCCCTCTAGGAGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR CAA 90 bp | AGCCAAGATAGAAAGCTCTTGTTTCATTTTCTTACCAAGCCAGCCTaGCTAACAGGACTGGGACTACCCAGATGGATCTCCCCATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SQDRKLLFHFLTKPA*LTGLGLPRWISPSP Trigger: AGGAGATGGGGAGATCCATCTGGGTAGTCCCAGTCCTGTTAGCAAGGCTGGCTTGGTAAGAAAATGAAACAAGAGCTTTCTATCTTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTATAGCATCTCTGGGCAATGTATTTCTTCAAGTTTCCATGGGAATCCTGGTATTGTTGGCCACAGTTaGGTGGTCAGGGAGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LYSISGQCISSSFHGNPGIVGHS*VVRESR Trigger: CCTGCTCTCCCTGACCACTCAACTGTGGCCAACAAT...ACCAGGATTCCCATGGAAACTTGAAGAAATACATTGCCCAGAGATGCTATAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCATGCTAGGATCTGCACCCTACAGTGCACTTTCCTGGTGAGTTCCTTTGGTGCTCTTAACACGACCTaGATACAAGGTCCTATCATT | + |
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Preference number: 2 (lower is better) Translates to: CHARICTLQCTFLVSSFGALNTT*IQGPII Trigger: AATGATAGGACCTTGTATGCAGGTCGTGTTAAGAGC...ACCAAAGGAACTCACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR GCA 90 bp | CATTCTCCAGGACATCATCTTGATTTGGTTCCCACACAGGAAGAGAATACAAAAGTGGCTTTGTCCTCCTaGCCCGGTTACTGCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: HSPGHHLDLVPTQEENTKVALSS*PGYCHA Trigger: AGCATGGCAGTAACCGGGGCAGGAGGACAAAGCCAC...TTTTGTATTCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCATCTCTCATCTCGGTaGCTCTGTTTTTCCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LPVGGLCLAISLWLRFHTHLSSR*LCFSFL Trigger: CAGAAAGGAAAAACAGAGCCACCGAGATGAGAGATG...GGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAAGTGGGAATGATAAAGACTATCTGGCAGTAAGAATAGCAAGAGATGAAGCAGTGGCAGCAGCATaGAGGGATGAGAGGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: LESGNDKDYLAVRIARDEAVAAA*RDERHL Trigger: CAGGTGCCTCTCATCCCTCCATGCTGCTGCCACTGC...TTCATCTCTTGCTATTCTTACTGCCAGATAGTCTTTATCATTCCCACTTTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTCTACAGCTGGAAAGAATGGTGGCAAGTATGTGCATGGAGAAAATGGAGTGTATGATGGATGCTTaGCAGGGTTGGAGCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: ALLQLERMVASMCMEKMECMMDA*QGWSQD Trigger: ATCTTGGCTCCAACCCTGGCAAGCATCCATCATACA...CTCCATTTTCTCCATGCACATACTTGCCACCATTCTTTCCAGCTGTAGAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCTCCAGGACATCATCTTGATTTGGTTCCCACACAGGAAGAGAATACAAAATTGGCCACAGTTGAGTaGTCAGGGAGAGCAGGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: HSPGHHLDLVPTQEENTKLATVE*SGRAGH Trigger: ATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAA...TTTTGTATTCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAAAGTGGGAATGATAAAGACTATCTGGCAGTAAGAATAGCAAGAGATGAAACTCCTAGAGGGCAGTaGCAGGCAGCAGTGGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: LESGNDKDYLAVRIARDETPRGQ*QAAVGT Trigger: AGTTCCCACTGCTGCCTGCCACTGCCCTCTAGGAGT...TTCATCTCTTGCTATTCTTACTGCCAGATAGTCTTTATCATTCCCACTTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR TCA 90 bp | CATTCTCCAGGACATCATCTTGATTTGGTTCCCACACAGGAAGAGAATACAAAAACCTTGTTTGAGCTATaGTGGAGATGGCCAGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: HSPGHHLDLVPTQEENTKTLFEL*WRWPGH Trigger: GTGCCCTGGCCATCTCCATCATAGCTCAAACAAGGT...TTTTGTATTCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGTGGTATCTAGAGGACAACCATAGGGGCATGGTCCAGAATGGTGTGGTGCATGACAAATGGGCAGGGTaGTTATTTGTTTATCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: RWYLEDNHRGMVQNGVVHDKWAG*LFVYQL Trigger: AAGTTGATAAACAAATAAGCACCCTGCCCATTTGTC...ATGCACCACACCATTCTGGACCATGCCCCTATGGTTGTCCTCTAGATACCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCTCTCCACAATGAATTCAACTGGAAAGTGGGAATGATAAAGACTATCTGGTGCCAAGACTTTTGCTaGCTCCTTGTGAGGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PALHNEFNWKVGMIKTIWCQDFC*LLVRLP Trigger: AGGAAGCCTCACAAGGAGGCAGCAAAAGTCTTGGCA...CCAGATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAAAGTGGGAATGATAAAGACTATCTGGCAGTAAGAATAGCAAGAGATGAAATTGGGGTCCCAGGGTaGCAAGACTTTTGCTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LESGNDKDYLAVRIARDEIGVPG*QDFCCL Trigger: GAGGCAGCAAAAGTCTTGGCACCCTGGGACCCCAAT...TTCATCTCTTGCTATTCTTACTGCCAGATAGTCTTTATCATTCCCACTTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTTCTACAGCTGGAAAGAATGGTGGCAAGTATGTGCATGGAGAAAATGGAGTGGTCCAGAATGGTGTaGTGCATATGTGGGATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ALLQLERMVASMCMEKMEWSRMV*CICGIF Trigger: AAAGATCCCACATATGCACCACACCATTCTGGACCA...CTCCATTTTCTCCATGCACATACTTGCCACCATTCTTTCCAGCTGTAGAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCACTGGAAAGAGAACCCTGACAGAACTGAGTCTAGTCTTAGGCTGAAGGCAGACATCATCTTGATTTaGTTCCCACACAGGAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KHWKENPDRTESSLRLKADIILI*FPHRKR Trigger: TCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTC...TGCCTTCAGCCTAAGACTAGACTCAGTTCTGTCAGGGTTCTCTTTCCAGTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR TCA 90 bp | TACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGTCTTGGAACAGCCTCTaGGGTCCCATTGCCCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YHLKQNIIWFRGLALCLLSWNSL*GPIALK Trigger: CTTTAGGGCAATGGGACCTCAGAGGCTGTTCCAAGA...CAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTCTATGTCATATTTTTTAATTCTGAAAGCCTaGACTGGTGATGGTGGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LATVEWSGRAGHSSMSYFLILKA*TGDGGI Trigger: AATGCCACCATCACCAGTTCAGGCTTTCAGAATTAA...AAAATATGACATAGAACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCTCCACAATGAATTCAACTGGAAAGTGGGAATGATAAAGACTATCTGGCTTTCCAACCTTGTTTaGGCTATGATGGAGATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PALHNEFNWKVGMIKTIWLSNLV*AMMEMA Trigger: GGCCATCTCCATCATAGCTCAAACAAGGTTGGAAAG...CCAGATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGTGCCTGTTGGAGGCCTTTaGTTAGCAATCTCTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LKQNIIWFRGLALCLLLVPVGGL*LAISLW Trigger: CCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGG...CACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR GCA 90 bp | GGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCAGATCTCTGGCCTTCTTCCTaGAGACACATTCATGTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GSMKDPPLKDKKLRKIPDLWPSS*RHIHVH Trigger: GTGCACATGAATGTGTCTGCAGGAAGAAGGCCAGAG...ATCTGGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCATGCTAGGATCTGCACCCTACAGTGCACTTTCCTGGTGAGTTCCTTTGGTGGAGAGATTTACTTTTaGACCTACTTCTTCTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: CHARICTLQCTFLVSSFGGEIYF*TYFFYV Trigger: TACATAGAAGAAGTAGGTGCAAAAGTAAATCTCTCC...ACCAAAGGAACTCACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCACCATATCAAATGGGTCATCTCTCATCTCGGTaGCTCTGTTTTTCCTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSNLSLASFSHPPYQMGHLSSR*LCFSFL Trigger: CAGAAAGGAAAAACAGAGCCACCGAGATGAGAGATG...ACCCATTTGATATGGTGGGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR CAA 90 bp | CATGATTTACAAAAGGTCCTTGGGTCTTGCCTCCTTTACTTCCTTTaGCCTCCTTTCGGAGTATACAAAACAAGACAAGGTTCCCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HDLQKVLGSCLLYFL*PPFGVYKTRQGSLA Trigger: AGCTAGGGAACCTTGTCTTGTTTTGTATACTCCGAAAGGAGGCAAAAGGAAGTAAAGGAGGCAAGACCCAAGGACCTTTTGTAAATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR-3UTR TCA 90 bp | GATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATGGAAATAAGAATTCTTGGAACAGCCTCTaGGGTCCCATTGCCCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: DQDISTLRIPVSSHGNKNSWNSL*GPIALK Trigger: CTTTAGGGCAATGGGACCTCAGAGGCTGTTCCAAGA...ATTCTTATTTCCATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR GCA 90 bp | TCTATTGCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCCCTGTTGGAGGCCTTTaGTTAGCAATCTCTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SIACELDQDISTLRIPVSPVGGL*LAISLW Trigger: CCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGG...GGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGCAATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGACATGGATGAGGAAAATGAAGATGATGACAAAGACGGTGAGCATTGTGTTTTGTATGATGGATGCTTaGCAGGGTTGGAGCCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VTWMRKMKMMTKTVSIVFCMMDA*QGWSQD Trigger: ATCTTGGCTCCAACCCTGGCAAGCATCCATCATACA...AAACACAATGCTCACCGTCTTTGTCATCATCTTCATTTTCCTCATCCATGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGATTAGATCAATGCAGATGAGTTGGATTACGACACGTTCCCCTTCTCCACCCAAAGTGGATGGATaGTCATACAAAGTTAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: WLIRSMQMSWITTRSPSPPKVDG*SYKVSF Trigger: AAAGCTAACTTTGTATGAGCATCCATCCACTTTGGG...TGGAGAAGGGGAACGTGTCGTAATCCAACTCATCTGCATTGATCTAATCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCGCATCTGTTGCCTGTTaGAGGCCTTTGCTTAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SRIYERSTAQRQEIEEDTASVAC*RPLLSN Trigger: ATTGCTAAGCAAAGGCCTCCAACAGGCAACAGATGC...GGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGCAGCAGTGGGAACTGAAAAATTGGGTGTCAGAGGGAGAGATTTACTTTCTATGCTCAGAGTATTaGCATTTTGTCATAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GRQQWELKNWVSEGEIYFLCSEY*HFVIRG Trigger: TCCTCTTATGACAAAATGCCAATACTCTGAGCATAG...AAAGTAAATCTCTCCCTCTGACACCCAATTTTTCAGTTCCCACTGCTGCCTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR TCA 90 bp | TCTATTGCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCGAAGCTGAAGTTAGATaGCCTTTGACAGTCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SIACELDQDISTLRIPVSEAEVR*PLTVLL Trigger: CAGCAGGACTGTCAAAGGTCATCTAACTTCAGCTTC...GGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGCAATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTCTACAGCTGGAAAGAATGGTGGCAAGTATGTGCATGGAGAAAATGGAGATGGAGATCAAATTGTaGCACTCAAAAGAACACTTG | + |
|
Preference number: 2 (lower is better) Translates to: ALLQLERMVASMCMEKMEMEIKL*HSKEHL Trigger: CAAGTGTTCTTTTGAGTGGCACAATTTGATCTCCAT...CTCCATTTTCTCCATGCACATACTTGCCACCATTCTTTCCAGCTGTAGAAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR CAA 90 bp | TGGGAGCATAGTCTGTGCACAGCTGGGCTTTACTGCTGCCTTTTATaGGTTTTTGTGATTATTATTGTTATGATGAGTGCTGAATTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: WEHSLCTAGLYCCLL*VFVIIIVMMSAEFW Trigger: CCAGAATTCAGCACTCATCATAACAATAATAATCACAAAAACCAATAAAAGGCAGCAGTAAAGCCCAGCTGTGCACAGACTATGCTCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| 3UTR-3UTR GCA 90 bp | GTACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTATTGGTAAAAGTGCTTaGCACACAATCACGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VPFETKYNLVPWLGSVSIIGKSA*HTITRA Trigger: AGCCCTCGTGATTGTGTGGCAAGCACTTTTACCAAT...AATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR TCA 90 bp | TTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGTGACGAATCTCAATTCATaGAGCCAGAAACCTCACATT | + |
|
Preference number: 2 (lower is better) Translates to: LKQNIIWFRGLALCLLLVTNLNS*SQKPHI Trigger: AATGTGAGGTTTCTGGCTTCATGAATTGAGATTCGT...CACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATACGAATCTCAATTCATaGAGCCAGAAACCTCACATT | + |
|
Preference number: 2 (lower is better) Translates to: ACELDQDISTLRIPVSSHTNLNS*SQKPHI Trigger: AATGTGAGGTTTCTGGCTTCATGAATTGAGATTCGT...ATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR GCA 90 bp | GGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCAGATGCAGACACATTCATGTaGACATATGCATGCTTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: GSMKDPPLKDKKLRKIPDADTFM*TYACFY Trigger: GTAAAAGCATGCATATGTGCACATGAATGTGTCTGC...ATCTGGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR TCA 90 bp | TTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGTGTCAAAGACAAGAAATTaGGGAAGATACCAGATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LKQNIIWFRGLALCLLLVSKTRN*GRYQMS Trigger: TGACATCTGGTATCTTCCTCAATTTCTTGTCTTTGA...CACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR TCA 90 bp | TCTATTGCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTGGGTCAGAGTAATGTaGGTTATTGTCACTGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SIACELDQDISTLRIPVSWVRVM*VIVTVL Trigger: AAGAACAGTGACAATAACTCACATTACTCTGACCCA...GGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGCAATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| 3UTR-3UTR TCA 90 bp | GTACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTTGGGTCAGAGTAATGTaGGTTATTGTCACTGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VPFETKYNLVPWLGSVSIWVRVM*VIVTVL Trigger: AAGAACAGTGACAATAACTCACATTACTCTGACCCA...AATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR TCA 90 bp | GTATACAAAACAAGACAAGGTTCCCTAGCTTGGAGGAATGAACAAAGGTATCTTACTCAAAAGAACACTTaGTCTCAAGAGGCATTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VYKTRQGSLAWRNEQRYLTQKNT*SQEAFG Trigger: ACCAAATGCCTCTTGAGATCAAGTGTTCTTTTGAGT...AAGATACCTTTGTTCATTCCTCCAAGCTAGGGAACCTTGTCTTGTTTTGTATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTTCACTGTTCTTTGAGTaGAGACTGATGTTTTACACC | + |
|
Preference number: 2 (lower is better) Translates to: HLKQNIIWFRGLALCLLLSLFFE*RLMFYT Trigger: GGTGTAAAACATCAGTCTGCACTCAAAGAACAGTGA...AAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CCA 90 bp | CATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGATCTTTCGTGTATTTaGGGGGATTTTCTTAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HLKQNIIWFRGLALCLLLDLSCI*GDFLRQ Trigger: TTGCCTAAGAAAATCCCCCCAAATACACGAAAGATC...AAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR TCA 90 bp | TACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGTCAAAGACAAGAAATTaGGGAAGATACCAGATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: YHLKQNIIWFRGLALCLLSKTRN*GRYQMS Trigger: TGACATCTGGTATCTTCCTCAATTTCTTGTCTTTGA...CAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CCA 90 bp | GTATACAAAACAAGACAAGGTTCCCTAGCTTGGAGGAATGAACAAAGGTATCTTAAATGGAAAAGAAGGTaGTATCTAGAGGACAACCAT | + |
|
Preference number: 2 (lower is better) Translates to: VYKTRQGSLAWRNEQRYLKWKRR*YLEDNH Trigger: ATGGTTGTCCTCTAGATACCACCTTCTTTTCCATTT...AAGATACCTTTGTTCATTCCTCCAAGCTAGGGAACCTTGTCTTGTTTTGTATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCCAGGACATCATCTTGATTTGGTTCCCACACAGGAAGAGAATACAAAACACAATGAATTCAACTaGAAAGTGGGAATGATAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HSPGHHLDLVPTQEENTKHNEFN*KVGMIK Trigger: CTTTATCATTCCCACTTTCCAGTTGAATTCATTGTG...TTTTGTATTCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | CGTCCTGTGGGGATGAATGTGGTGGCTTTGTCCTCCTaGCCCGGTTACTGCCATGCTAGGATCTGCACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: RPVGMNVVALSS*PGYCHARICTL Trigger: TAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCAGGAGGACAAAGCCACCACATTCATCCCCACAGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | TGTCACTTGTGGTGCCTCTGTTTCAGAGGCTGGAGTTaGCCCACTGGGAGCATAGTCTGTGCACAGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CHLWCLCFRGWS*PTGSIVCAQLG Trigger: GCCCAGCTGTGCACAGACTATGCTCCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | GTGGTGCCTCTGTTTCAGAGGCTGGAGTTGCCCCACTaGGAGCATAGTCTGTGCACAGCTGGGCTTTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: VVPLFQRLELPH*EHSLCTAGLYC Trigger: GCAGTAAAGCCCAGCTGTGCACAGACTATGCTCCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | CCCGGTTACTGCCATGCTAGGATCTGCACCCTACAGTaGACTTTCCTGGTGAGTTCCTTTGGTGTGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PGYCHARICTLQ*TFLVSSFGVST Trigger: GGTGCTCACACCAAAGGAACTCACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | TTGTCCTCCTGCCCCGGTTACTGCCATGCTAGGATCTaGACCCTACAGTGCACTTTCCTGGTGAGTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSSCPGYCHARI*TLQCTFLVSSF Trigger: AAAGGAACTCACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCAGGAGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | CAGAGGCTGGAGTTGCCCCACTGGGAGCATAGTCTGTaGACAGCTGGGCTTTACTGCTGCCTTTTATTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QRLELPHWEHSL*TAGLYCCLLLV Trigger: AACCAATAAAAGGCAGCAGTAAAGCCCAGCTGTGCACAGACTATGCTCCCAGTGGGGCAACTCCAGCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR TCA 72 bp | GTTACTAAGGAGAGAAGACATACCGTCCTGTGGGGATaGATGTGGTGGCTTTGTCCTCCTGCCCCGGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: VTKERRHTVLWG*MWWLCPPAPVT Trigger: AGTAACCGGGGCAGGAGGACAAAGCCACCACATTCATCCCCACAGGACGGTATGTCTTCTCTCCTTAGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | TTAAGGTGGCGTCTTCTGTTTAGATGTCACTTGTGGTaGCTCTGTTTCAGAGGCTGGAGTTGCCCCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRWRLLFRCHLW*LCFRGWSCPTG Trigger: CCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACATCTAAACAGAAGACGCCACCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | GCTATCTCACTCCTAGAGGGCAGTGGCAGGCAGCAGTaGGAACTGAAAAATTGGGTGTCAGAGGGAGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: AISLLEGSGRQQ*ELKNWVSEGEI Trigger: AATCTCTCCCTCTGACACCCAATTTTTCAGTTCCCACTGCTGCCTGCCACTGCCCTCTAGGAGTGAGATAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | TTTAGATGTCACTTGTGGTGCCTCTGTTTCAGAGGCTaGAGTTGCCCCACTGGGAGCATAGTCTGTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: FRCHLWCLCFRG*SCPTGSIVCAQ Trigger: CTGTGCACAGACTATGCTCCCAGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACATCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | CCTAAGCTTGGGCATCTGTTGCCTGTTGGAGGCCTTTaGTTAGCAATCTCTCTCTGGCTTCGTTTTCACACC | + |
|
Preference number: 3 (lower is better) Translates to: PKLGHLLPVGGL*LAISLWLRFHT Trigger: GGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAACAGATGCCCAAGCTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CCA 72 bp | TGGTGTGAGCACCATGGAAAGAACAGTCACATAAATTaGGGTCCCAGGGTGCCAAGACTTTTGCTGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WCEHHGKNSHIN*GPRVPRLLLPP Trigger: AGGAGGCAGCAAAAGTCTTGGCACCCTGGGACCCCAATTTATGTGACTGTTCTTTCCATGGTGCTCACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | CTGTTAAGGTGGCGTCTTCTGTTTAGATGTCACTTGTaGTGCCTCTGTTTCAGAGGCTGGAGTTGCCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLRWRLLFRCHL*CLCFRGWSCPT Trigger: AGTGGGGCAACTCCAGCCTCTGAAACAGAGGCACCACAAGTGACATCTAAACAGAAGACGCCACCTTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTGCTTTCCAACCTTGTTaGAGCTATGATGGAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: RVYHCWPQLSGQGEQGIVAFQPC*SYDGDG Trigger: GCCATCTCCATCATAGCTCAAACAAGGTTGGAAAGC...AACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTGTGGGAACTGAAAAATaGGGTGTCAGAGGGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RVYHCWPQLSGQGEQGIVVGTEK*GVRGRD Trigger: ATCTCTCCCTCTGACACCCAATTTTTCAGTTCCCAC...AACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | AACACTGAGAGGTCTATGGACCCAACTCCCAACCAGTaGCATGATTTACAAAAGGTCCTTGGGTCTTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: NTERSMDPTPNQ*HDLQKVLGSCL Trigger: GAGGCAAGACCCAAGGACCTTTTGTAAATCATGGCACTGGTTGGGAGTTGGGTCCATAGACCTCTCAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR CCA 72 bp | CTTAGCTTATGGAGACTAGCTAGAGTCTACCATTGTTaGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: LSLWRLARVYHC*PQLSGQGEQGI Trigger: TATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCTAGCTAGTCTCCATAAGCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | GTGCTGAGGGTGATTACTTCACAACTAGACTACAATTaGGAAGTCGCTGGGAGGTCCTTTCACTCCCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLRVITSQLDYN*EVAGRSFHSPF Trigger: GAAAGGGGAGTGAAAGGACCTCCCAGCGACTTCCCAATTGTAGTCTAGTTGTGAAGTAATCACCCTCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTCTCCTTTACTTCCTTTaGCCTCCTTTCGGAGTATAC | + |
|
Preference number: 3 (lower is better) Translates to: RVYHCWPQLSGQGEQGIVLLYFL*PPFGVY Trigger: GTATACTCCGAAAGGAGGCAAAAGGAAGTAAAGGAG...AACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR CCA 72 bp | AGGACATTCTCTTCCATCAGGTACCCGAGGAAGCACTaGAAAGAGAACCCTGACAGAACTGAGTCTAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTFSSIRYPRKH*KENPDRTESSL Trigger: AAGACTAGACTCAGTTCTGTCAGGGTTCTCTTTCCAGTGCTTCCTCGGGTACCTGATGGAAGAGAATGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTCACTCAAAAGAACACTaGATCTCAAGAGGCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVYHCWPQLSGQGEQGIVHSKEH*ISRGIW Trigger: CCAAATGCCTCTTGAGATCAAGTGTTCTTTTGAGTG...AACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTCTCCACAATGAATTCAACTGGAAAGTGGGAATGATAAAGACTATCTGGATGAATGTGGTGGCTTaGTCCTCCTGCCCCGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PALHNEFNWKVGMIKTIWMNVVA*SSCPGY Trigger: GTAACCGGGGCAGGAGGACAAAGCCACCACATTCAT...CCAGATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGCTGGTCAACCTCACTGAACTGGTGAGTTCTAGGATCTATGAAAGATCCTTTTCCTTTCTGTTCTaGGAACAGCCTCTGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HWLVNLTELVSSRIYERSFSFLF*EQPLRS Trigger: GGACCTCAGAGGCTGTTCCAAGAACAGAAAGGAAAA...GGATCTTTCATAGATCCTAGAACTCACCAGTTCAGTGAGGTTGACCAGCCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGCTGGTCAACCTCACTGAACTGGTGAGTTCTAGGATCTATGAAAGATCCATGAGGCTTAAAGATTaGCCTTGCCAAGACCCGATC | + |
|
Preference number: 3 (lower is better) Translates to: HWLVNLTELVSSRIYERSMRLKD*PCQDPI Trigger: GATCGGGTCTTGGCAAGGCAAATCTTTAAGCCTCAT...GGATCTTTCATAGATCCTAGAACTCACCAGTTCAGTGAGGTTGACCAGCCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | TATCTAGAGGACAACCATAGGGGCATGGTCCAGAATGGTGTGGTGCATATGTGGGACTGTGTTAGAGGTTaGAACCCAAGTTCTAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YLEDNHRGMVQNGVVHMWDCVRG*NPSSKG Trigger: TCCTTTAGAACTTGGGTTCAAACCTCTAACACAGTC...CCACATATGCACCACACCATTCTGGACCATGCCCCTATGGTTGTCCTCTAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR TCA 72 bp | CTGAGGTCCCATTGCCCTAAAGAAGCTGAAGTTAGATaGCCTTTGACAGTCCTGCTGAGTGGTCCTATCATT | + |
|
Preference number: 3 (lower is better) Translates to: LRSHCPKEAEVR*PLTVLLSGPII Trigger: AATGATAGGACCACTCAGCAGGACTGTCAAAGGTCATCTAACTTCAGCTTCTTTAGGGCAATGGGACCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR TCA 72 bp | TCATACAAAGTTAGCTTTCCAACCTTGTTTGAGCTATaGTGGAGATGGCCAGGGCACCGTGATACAGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SYKVSFPTLFEL*WRWPGHRDTGC Trigger: ACACCCTGTATCACGGTGCCCTGGCCATCTCCATCATAGCTCAAACAAGGTTGGAAAGCTAACTTTGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | TGGGTGGCAGGGTGTATGATGGATGCTTGCCAGGGTTaGAGCCAAGATAGAAAGCTCTTGTTTCATTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WVAGCMMDACQG*SQDRKLLFHFL Trigger: AAGAAAATGAAACAAGAGCTTTCTATCTTGGCTCCAACCCTGGCAAGCATCCATCATACACCCTGCCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | CTGCACCCTACAGTGCACTTTCCTGGTGAGTTCCTTTaGTGTGAGCACCATGGAAAGAACAGTCACATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LHPTVHFPGEFL*CEHHGKNSHIN Trigger: ATTTATGTGACTGTTCTTTCCATGGTGCTCACACCAAAGGAACTCACCAGGAAAGTGCACTGTAGGGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTGATTAGATCAATGCAGATGAGTTGGATTACGACACGTTCCCCTTCTCCAAGGGCAGGAACCGGATaGAATTTGTCTTTCATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: WLIRSMQMSWITTRSPSPRAGTG*NLSFIL Trigger: GAGAATGAAAGACAAATTCAATCCGGTTCCTGCCCT...TGGAGAAGGGGAACGTGTCGTAATCCAACTCATCTGCATTGATCTAATCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | GAGGCTGAATGTTCCTCTTCTTGTGCCTTAGTTAACTaGGGACCTTTTAGACGCTGGAGAAACATTGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EAECSSSCALVN*GPFRRWRNIVL Trigger: CAAGACAATGTTTCTCCAGCGTCTAAAAGGTCCCCAGTTAACTAAGGCACAAGAAGAGGAACATTCAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR-3UTR CAA 90 bp | CTATGGACCCAACTCCCAACCAGTGCCATGATTTACAAAAGGTCCTTGGGTCTTGGGCAGGGTGCTTATTaGTTTATCAACTTGATAACT | + |
|
Preference number: 3 (lower is better) Translates to: LWTQLPTSAMIYKRSLGLGQGAY*FINLIT Trigger: AGTTATCAAGTTGATAAACAAATAAGCACCCTGCCC...AAGACCCAAGGACCTTTTGTAAATCATGGCACTGGTTGGGAGTTGGGTCCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR TCA 72 bp | CTAAAGATCATTGGCTGGTCAACCTCACTGAACTGGTaGGTTCTAGGATCTATGAAAGATCCACCGCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LKIIGWSTSLNW*VLGSMKDPPLK Trigger: TTTGAGCGGTGGATCTTTCATAGATCCTAGAACTCACCAGTTCAGTGAGGTTGACCAGCCAATGATCTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR GCA 72 bp | AGGAAGATACCAGATGTCACTCTCTGGCCTTCTTCCTaGAGACACATTCATGTGCACATATGCATGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RKIPDVTLWPSS*RHIHVHICMLL Trigger: TAAAAGCATGCATATGTGCACATGAATGTGTCTGCAGGAAGAAGGCCAGAGAGTGACATCTGGTATCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CCA 72 bp | GGTCTGTTTTGGCTGATTAGATCAATGCAGATGAGTTaGATTACGACACGTTCCCCTTCTCCATGCATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GLFWLIRSMQMS*ITTRSPSPCIV Trigger: TACAATGCATGGAGAAGGGGAACGTGTCGTAATCCAACTCATCTGCATTGATCTAATCAGCCAAAACAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCTTTTCCTTTCTGTTCTaGGAACAGCCTCTGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SRIYERSTAQRQEIEEDTFSFLF*EQPLRS Trigger: GGACCTCAGAGGCTGTTCCAAGAACAGAAAGGAAAA...GGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATGGAAATAAGAATGCCTGTTGGAGGCCTTaGCTTAGCAATCTCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DQDISTLRIPVSSHGNKNACWRP*LSNLSL Trigger: CAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGC...ATTCTTATTTCCATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGCTGGTCAACCTCACTGAACTGGTGAGTTCTAGGATCTATGAAAGATCCCTCAAAGACAAGAAATaGAGGAAGATACCAGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: HWLVNLTELVSSRIYERSLKDKK*RKIPDV Trigger: GACATCTGGTATCTTCCTCAATTTCTTGTCTTTGAG...GGATCTTTCATAGATCCTAGAACTCACCAGTTCAGTGAGGTTGACCAGCCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTCTATGTCATATTTTGAGGCATTTGGTGTCTaGTCTTGTTCTAATTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: LATVEWSGRAGHSSMSYFEAFGV*SCSNSM Trigger: CATAGAATTAGAACAAGACAAGACACCAAATGCCTC...AAAATATGACATAGAACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR-3UTR CAA 90 bp | CTATGGACCCAACTCCCAACCAGTGCCATGATTTACAAAAGGTCCTTGGGTCTTGTTTCCACTATAGCATaGGCTCTTTTCATATTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWTQLPTSAMIYKRSLGLVSTIA*ALFIFP Trigger: AGGAAATATGAAAAGAGCCAATGCTATAGTGGAAAC...AAGACCCAAGGACCTTTTGTAAATCATGGCACTGGTTGGGAGTTGGGTCCATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR TCA 72 bp | GTCCAGAATGGTGTGGTGCATATGTGGGATCTTTTCTaGAAAGAATTTTATTGGCTAGCCCTTGACCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VQNGVVHMWDLF*KEFYWLALDQH Trigger: ATGCTGGTCAAGGGCTAGCCAATAAAATTCTTTTCAGAAAAGATCCCACATATGCACCACACCATTCTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR CCA 72 bp | CTTTCCAAAAACACTTTAGGCAAGAAGCTTAGCTTATaGAGACTAGCTAGAGTCTACCATTGTTGGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSKNTLGKKLSL*RLARVYHCWPQ Trigger: CTGTGGCCAACAATGGTAGACTCTAGCTAGTCTCCATAAGCTAAGCTTCTTGCCTAAAGTGTTTTTGGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGTGCTCTTCTACAGCTGGAAAGAATGGTGGCAAGTATGTGCATGGAGAAAATCCTTCAGTTTCTCTaGCAACACAACACAGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FCALLQLERMVASMCMEKILQFL*QHNTVE Trigger: CTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGAT...TTTCTCCATGCACATACTTGCCACCATTCTTTCCAGCTGTAGAAGAGCACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTCTCCACAATGAATTCAACTGGAAAGTGGGAATGATAAAGACTATCTGGATCCTTCAGTTTCTCTaGCAACACAACACAGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PALHNEFNWKVGMIKTIWILQFL*QHNTVE Trigger: CTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGAT...CCAGATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATAGGGAGATGGATCAATaGGTAAAAGTGCTTGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ACELDQDISTLRIPVSSHREMDQ*VKVLAT Trigger: TGTGGCAAGCACTTTTACCAATTGATCCATCTCCCT...ATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR TCA 72 bp | ATATCAAATGGGTACCACATTTTAAGGGTGAAGTCATaGGGCTTAAAGATTTGCCTTGCCAAGACCCGATCA | + |
|
Preference number: 3 (lower is better) Translates to: ISNGYHILRVKS*GLKICLAKTRS Trigger: TGATCGGGTCTTGGCAAGGCAAATCTTTAAGCCTCATGACTTCACCCTTAAAATGTGGTACCCATTTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR TCA 72 bp | TGTTTCCACTATAGCATTGGCTCTTTTCATATTTCCTaGGCAGCTAGACAAATGGGCAGGGTGCTTATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CFHYSIGSFHIS*AARQMGRVLIC Trigger: ACAAATAAGCACCCTGCCCATTTGTCTAGCTGCTCAGGAAATATGAAAAGAGCCAATGCTATAGTGGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR TCA 72 bp | TGGTGGCAAGTATGTGCATGGAGAAAATGGAGCTCTTaGCCTTTTTCAAAGGTTGGAATGAAATTCAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: WWQVCAWRKWSS*PFSKVGMKFKS Trigger: GGACTTGAATTTCATTCCAACCTTTGAAAAAGGTCAAGAGCTCCATTTTCTCCATGCACATACTTGCCACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR TCA 72 bp | ATTGGTTTTTGTGATTATTATTGTTATGATGAGTGCTaGATTCTGGGGTCCTGCTATGCAGGCTTCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IGFCDYYCYDEC*ILGSCYAGFQD Trigger: GTCCTGGAAGCCTGCATAGCAGGACCCCAGAATTCAGCACTCATCATAACAATAATAATCACAAAAACCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | CTGAAAAATTGGGTGTCAGAGGGAGAGATTTACTTTTaGACCTACTTCTTCTATGTACTTAGGCCACAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LKNWVSEGEIYF*TYFFYVLRPQG Trigger: ACCTTGTGGCCTAAGTACATAGAAGAAGTAGGTGCAAAAGTAAATCTCTCCCTCTGACACCCAATTTTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR GCA 72 bp | CACTGGGAGCATAGTCTGTGCACAGCTGGGCTTTACTaGTGCCTTTTATTGGTTTTTGTGATTATTATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HWEHSLCTAGLY*CLLLVFVIIIV Trigger: AACAATAATAATCACAAAAACCAATAAAAGGCAGCAGTAAAGCCCAGCTGTGCACAGACTATGCTCCCAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | CCTCTACTTTCCATTCTCCAGGACATCATCTTGATTTaGTTCCCACACAGGAAGAGAATACAAAAGAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PLLSILQDIILI*FPHRKRIQKKH Trigger: ATGCTTCTTTTGTATTCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATGGAAAGTAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | TTTGTGATTATTATTGTTATGATGAGTGCTGAATTCTaGGGTCCTGCTATGCAGGCTTCCAGGACATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FVIIIVMMSAEF*GPAMQASRTFS Trigger: AGAGAATGTCCTGGAAGCCTGCATAGCAGGACCCCAGAATTCAGCACTCATCATAACAATAATAATCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGTGATCCTTCAGTTTCTCTaGCAACACAACACAGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKQNIIWFRGLALCLLLVILQFL*QHNTVE Trigger: CTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGAT...CACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATGGAAATAAGAATATGAGGCTTAAAGATTaGCCTTGCCAAGACCCGATC | + |
|
Preference number: 3 (lower is better) Translates to: DQDISTLRIPVSSHGNKNMRLKD*PCQDPI Trigger: GATCGGGTCTTGGCAAGGCAAATCTTTAAGCCTCAT...ATTCTTATTTCCATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGACATGGATGAGGAAAATGAAGATGATGACAAAGACGGTGAGCATTGTGTTTGGAACCGGATTGAATTaGTCTTTCATTCTCAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VTWMRKMKMMTKTVSIVFGTGLN*SFILSC Trigger: GCAACTGAGAATGAAAGACAAATTCAATCCGGTTCC...AAACACAATGCTCACCGTCTTTGTCATCATCTTCATTTTCCTCATCCATGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATGGAAATAAGAATAGGGAGATGGATCAATaGGTAAAAGTGCTTGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: DQDISTLRIPVSSHGNKNREMDQ*VKVLAT Trigger: TGTGGCAAGCACTTTTACCAATTGATCCATCTCCCT...ATTCTTATTTCCATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTATTGCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCGAAACCTCACATTACTaGAGTCCAGATAGAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SIACELDQDISTLRIPVSETSHY*SPDRGV Trigger: TACACCTCTATCTGGACTCAAGTAATGTGAGGTTTC...GGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGCAATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR-3UTR CAA 90 bp | CATTCTCCAGGACATCATCTTGATTTGGTTCCCACACAGGAAGAGAATACAAAAGGGAGAGATTTACTTTaGCACCTACTTCTTCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: HSPGHHLDLVPTQEENTKGRDLL*HLLLLC Trigger: ACATAGAAGAAGTAGGTGCAAAAGTAAATCTCTCCC...TTTTGTATTCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR TCA 72 bp | ATACAAAACAAGACAAGGTTCCCTAGCTTGGAGGAATaGACAAAGGTATCTTTTTGTGCTCTTCTACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: IQNKTRFPSLEE*TKVSFCALLQL Trigger: CAGCTGTAGAAGAGCACAAAAAGATACCTTTGTTCATTCCTCCAAGCTAGGGAACCTTGTCTTGTTTTGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR TCA 72 bp | TTTAGCCTCTACTTTCCATTCTCCAGGACATCATCTTaGTTTGGTTCCCACACAGGAAGAGAATACAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FSLYFPFSRTSS*FGSHTGREYKR Trigger: TCTTTTGTATTCTCTTCCTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATGGAAAGTAGAGGCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | AGTCACCTGTCATACTCTTTGTTCATGCAGATAATTTaGATAAGCATCCCAGCTCTCCACAATGAATTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SHLSYSLFMQII*ISIPALHNEFN Trigger: GTTGAATTCATTGTGGAGAGCTGGGATGCTTATCCAAATTATCTGCATGAACAAAGAGTATGACAGGTGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR TCA 72 bp | GCAGATAATTTGGATAAGCATCCCAGCTCTCCACAATaGATTCAACTGGAAAGTGGGAATGATAAAGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: ADNLDKHPSSPQ*IQLESGNDKDY Trigger: ATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGGGATGCTTATCCAAATTATCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CCA 72 bp | TTGGCTCTTTTCATATTTCCTGAGCAGCTAGACAAATaGGCAGGGTGCTTATTTGTTTATCAACTTGATAAC | + |
|
Preference number: 3 (lower is better) Translates to: LALFIFPEQLDK*AGCLFVYQLDN Trigger: GTTATCAAGTTGATAAACAAATAAGCACCCTGCCCATTTGTCTAGCTGCTCAGGAAATATGAAAAGAGCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR CCA 72 bp | AATGAACAAAGGTATCTTTTTGTGCTCTTCTACAGCTaGAAAGAATGGTGGCAAGTATGTGCATGGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NEQRYLFVLFYS*KEWWQVCAWRK Trigger: TTTTCTCCATGCACATACTTGCCACCATTCTTTCCAGCTGTAGAAGAGCACAAAAAGATACCTTTGTTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR TCA 72 bp | AATGTGAGTTATTGTCACTGTTCTTTGAGTGCAGACTaGTGTTTTACACCCTTATTTGTGTCACATAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: NVSYCHCSLSAD*CFTPLFVSHRS Trigger: AGATCTATGTGACACAAATAAGGGTGTAAAACATCAGTCTGCACTCAAAGAACAGTGACAATAACTCACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR TCA 72 bp | GAAAATGGAGCTCTTGACCTTTTTCAAAGGTTGGAATaGAATTCAAGTCCTGATCTCTTCAAATACATTACA | + |
|
Preference number: 3 (lower is better) Translates to: ENGALDLFQRLE*NSSPDLFKYIT Trigger: TGTAATGTATTTGAAGAGATCAGGACTTGAATTTCATTCCAACCTTTGAAAAAGGTCAAGAGCTCCATTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR GCA 72 bp | AGCAAGAACCAGCAATTAATAGCTATTCTTTCTTTATaGTCCAATGAACAAGTTACTAAGGAGAGAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: SKNQQLIAILSL*SNEQVTKERRH Trigger: ATGTCTTCTCTCCTTAGTAACTTGTTCATTGGAGCATAAAGAAAGAATAGCTATTAATTGCTGGTTCTTGCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCCGGTTACTGCCATGCTAGGATCTGCACCCTACAGTGCACTTTCCTGGTGGTTGCGGGTGTCCATTaGCAGGTCCGGGGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPGYCHARICTLQCTFLVVAGVH*QVRGYR Trigger: TCTGTACCCCCGGACCTGCCAATGGACACCCGCAAC...CACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | GCAGGGTGTATGATGGATGCTTGCCAGGGTTGGAGCCAAGATAGAAAGCTCTTGGACCAGCAACAAGGCTaGGTGGGGAGGCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGCMMDACQGWSQDRKLLDQQQG*VGRPRP Trigger: TGGCCTGGGCCTCCCCACTCAGCCTTGTTGCTGGTC...CAAGAGCTTTCTATCTTGGCTCCAACCCTGGCAAGCATCCATCATACACCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | AGGTGGTATCTAGAGGACAACCATAGGGGCATGGTCCAGAATGGTGTGGTGCATGCTAAGCGCTTGGCGTaGAGAAAGAGGCCAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWYLEDNHRGMVQNGVVHAKRLA*RKRPGG Trigger: GCCCCCTGGCCTCTTTCTCCACGCCAAGCGCTTAGC...ATGCACCACACCATTCTGGACCATGCCCCTATGGTTGTCCTCTAGATACCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CCA 90 bp | CCGAGGAAGCACTGGAAAGAGAACCCTGACAGAACTGAGTCTAGTCTTAGGCTGGCTAAGCGCTTGGCGTaGAGAAAGAGGCCAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRKHWKENPDRTESSLRLAKRLA*RKRPGG Trigger: GCCCCCTGGCCTCTTTCTCCACGCCAAGCGCTTAGC...CAGCCTAAGACTAGACTCAGTTCTGTCAGGGTTCTCTTTCCAGTGCTTCCTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCCGGTTACTGCCATGCTAGGATCTGCACCCTACAGTGCACTTTCCTGGTGTGCCCAGGAGGAAGTTaGTGGCTACAGAAGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CPGYCHARICTLQCTFLVCPGGS*WLQKRW Trigger: CCATCGCTTCTGTAGCCACCAACTTCCTCCTGGGCA...CACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCGCTAAGCGCTTGGCGTaGAGAAAGAGGCCAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVGGLCLAISLWLRFHTAKRLA*RKRPGG Trigger: GCCCCCTGGCCTCTTTCTCCACGCCAAGCGCTTAGC...GGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CAA 72 bp | AAGACATACCGTCCTGTGGGGATGAATGTGGTGGCTTaGTCCTCCTGCCCCGGTTACTGCCATGCTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KTYRPVGMNVVA*SSCPGYCHARI Trigger: GATCCTAGCATGGCAGTAACCGGGGCAGGAGGACAAAGCCACCACATTCATCCCCACAGGACGGTATGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | CATTGGCTGGTCAACCTCACTGAACTGGTGAGTTCTAGGATCTATGAAAGATCCGACCAGCAACAAGGCTaGGTGGGGAGGCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HWLVNLTELVSSRIYERSDQQQG*VGRPRP Trigger: TGGCCTGGGCCTCCCCACTCAGCCTTGTTGCTGGTC...GGATCTTTCATAGATCCTAGAACTCACCAGTTCAGTGAGGTTGACCAGCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | AGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTGCCTTGCTCCAACGGTaGCAACAGTTGGCCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RVYHCWPQLSGQGEQGIVALLQR*QQLAVM Trigger: CATCACGGCCAACTGTTGTCACCGTTGGAGCAAGGC...AACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR GCA 90 bp | AGGTGGTATCTAGAGGACAACCATAGGGGCATGGTCCAGAATGGTGTGGTGCATGTACCCGCATCAGAGTaGATCACCCCAGCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RWYLEDNHRGMVQNGVVHVPASE*ITPAAK Trigger: CTTGGCAGCTGGGGTGATGCACTCTGATGCGGGTAC...ATGCACCACACCATTCTGGACCATGCCCCTATGGTTGTCCTCTAGATACCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAACTGGTGAGTTCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAATGGAAGGCCTGGGGGTaGACCCTCCGCAGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TELVSSRIYERSTAQRQEWKAWG*TLRSQG Trigger: CCCCTGGCTGCGGAGGGTGCACCCCCAGGCCTTCCA...TTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGAACTCACCAGTTCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | CTCTATAGCATCTCTGGGCAATGTATTTCTTCAAGTTTCCATGGGAATCCTGGTTGGAAGGCCTGGGGGTaGACCCTCCGCAGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYSISGQCISSSFHGNPGWKAWG*TLRSQG Trigger: CCCCTGGCTGCGGAGGGTGCACCCCCAGGCCTTCCA...ACCAGGATTCCCATGGAAACTTGAAGAAATACATTGCCCAGAGATGCTATAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCCTATCATTTGCTATGTCCACCCTTCCCTATCTACTTAGCAGATAATTCCTGGAAGGCCTGGGGGTaGACCCTCCGCAGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSYHLLCPPFPIYLADNSWKAWG*TLRSQG Trigger: CCCCTGGCTGCGGAGGGTGCACCCCCAGGCCTTCCA...GGAATTATCTGCTAAGTAGATAGGGAAGGGTGGACATAGCAAATGATAGGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR GCA 90 bp | CTTCGTTTTCACACCCACCATATCAAATGGGTACCACATTTTAAGGGTGAAGTCTGGAAGGCCTGGGGGTaGACCCTCCGCAGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRFHTHHIKWVPHFKGEVWKAWG*TLRSQG Trigger: CCCCTGGCTGCGGAGGGTGCACCCCCAGGCCTTCCA...GACTTCACCCTTAAAATGTGGTACCCATTTGATATGGTGGGTGTGAAAACGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | GCAGGGTGTATGATGGATGCTTGCCAGGGTTGGAGCCAAGATAGAAAGCTCTTGTCCAGGTCTCTGAGATaGACAAGGCCCTGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGCMMDACQGWSQDRKLLSRSLR*TRPWKA Trigger: GGCCTTCCAGGGCCTTGTGCATCTCAGAGACCTGGA...CAAGAGCTTTCTATCTTGGCTCCAACCCTGGCAAGCATCCATCATACACCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | AGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTCGCAGCCAGGGGTTGTaGCTCAGGTCGATATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RVYHCWPQLSGQGEQGIVRSQGL*LRSICT Trigger: GGTACATATCGACCTGAGCCACAACCCCTGGCTGCG...AACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | TTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCACCATATCAAATGGGTGACCAGCAACAAGGCTaGGTGGGGAGGCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSNLSLASFSHPPYQMGDQQQG*VGRPRP Trigger: TGGCCTGGGCCTCCCCACTCAGCCTTGTTGCTGGTC...ACCCATTTGATATGGTGGGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | GCATCTGTTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTGTACCCGCATCAGAGTaGATCACCCCAGCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASVACWRPLLSNLSLASFVPASE*ITPAAK Trigger: CTTGGCAGCTGGGGTGATGCACTCTGATGCGGGTAC...AAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAACAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | GCATCTGTTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCCAGGTCTCTGAGATaGACAAGGCCCTGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASVACWRPLLSNLSLASFSRSLR*TRPWKA Trigger: GGCCTTCCAGGGCCTTGTGCATCTCAGAGACCTGGA...AAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAACAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | GCATCTGTTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTGCTGCAATGCGATTGTaGGCTAGGCTGAGGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ASVACWRPLLSNLSLASFAAMRL*ARLRLR Trigger: CCGCAACCTCAGCCTAGCCCACAATCGCATTGCAGC...AAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAACAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCGCAGCCAGGGGTTGTaGCTCAGGTCGATATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LPVGGLCLAISLWLRFHTRSQGL*LRSICT Trigger: GGTACATATCGACCTGAGCCACAACCCCTGGCTGCG...GGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGTGTATGATGGATGCTTGCCAGGGTTGGAGCCAAGATAGAAAGCTCTTGAGGGTCAGAGTCAGGTaGCAGGCCTTGAAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGCMMDACQGWSQDRKLLRVRVR*QALKLS Trigger: AGAGAGCTTCAAGGCCTGCCACCTGACTCTGACCCT...CAAGAGCTTTCTATCTTGGCTCCAACCCTGGCAAGCATCCATCATACACCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR GCA 90 bp | GAGAGGAGGAAGGGTGCTGAGGGTGATTACTTCACAACTAGACTACAATTGGGAGTACCCGCATCAGAGTaGATCACCCCAGCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERRKGAEGDYFTTRLQLGVPASE*ITPAAK Trigger: CTTGGCAGCTGGGGTGATGCACTCTGATGCGGGTAC...TCCCAATTGTAGTCTAGTTGTGAAGTAATCACCCTCAGCACCCTTCCTCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTAGAACAGCCGCTGGTTaGTGCAGTCCACTACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVYHCWPQLSGQGEQGIVRTAAG*CSPLLG Trigger: ACCAAGTAGTGGACTGCAGCAACCAGCGGCTGTTCT...AACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | TTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCACCATATCAAATGGGTCCAGGCCAGGGAAGTTaGGCCCAGGTGTCACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLSNLSLASFSHPPYQMGPGQGS*AQVSPI Trigger: GATGGGTGACACCTGGGCCCAACTTCCCTGGCCTGG...ACCCATTTGATATGGTGGGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099930.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTGATTAGATCAATGCAGATGAGTTGGATTACGACACGTTCCCCTTCTCCAGTTGCGGGTGTCCATTaGCAGGTCCGGGGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLIRSMQMSWITTRSPSPVAGVH*QVRGYR Trigger: TCTGTACCCCCGGACCTGCCAATGGACACCCGCAAC...TGGAGAAGGGGAACGTGTCGTAATCCAACTCATCTGCATTGATCTAATCAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCTGCCCAGGAGGAAGTTaGTGGCTACAGAAGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVGGLCLAISLWLRFHTCPGGS*WLQKRW Trigger: CCATCGCTTCTGTAGCCACCAACTTCCTCCTGGGCA...GGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | TATCTAGAGGACAACCATAGGGGCATGGTCCAGAATGGTGTGGTGCATATGTGGGTTCCATGTAGCATGTaGGATAGCCTGGCGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: YLEDNHRGMVQNGVVHMWVPCSM*DSLAVQ Trigger: CTGTACCGCCAGGCTATCTCACATGCTACATGGAAC...CCACATATGCACCACACCATTCTGGACCATGCCCCTATGGTTGTCCTCTAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR TCA 90 bp | GCTAGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAATATGTACCAGTCCATaGGCTTCCCGGAACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARVYHCWPQLSGQGEQGIICTSP*ASRNMS Trigger: TGACATGTTCCGGGAAGCTCATGGACTGGTACATAT...TATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR GCA 90 bp | TTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCACAGCCGCTGGTTGCTaGAGTCCACTACTTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPVGGLCLAISLWLRFHTTAAGC*SPLLGY Trigger: GTAACCAAGTAGTGGACTGCAGCAACCAGCGGCTGT...GGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | TATCTAGAGGACAACCATAGGGGCATGGTCCAGAATGGTGTGGTGCATATGTGGCCAGGAGGAAGTTGGTaGCTACAGAAGCGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLEDNHRGMVQNGVVHMWPGGSW*LQKRWR Trigger: TCTCCATCGCTTCTGTAGCCACCAACTTCCTCCTGG...CCACATATGCACCACACCATTCTGGACCATGCCCCTATGGTTGTCCTCTAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCAAATACATTACATCAAGCCCCTAACTGAGACCATGAAACTCTATAGCGACCAGCAACAAGGCTaGGTGGGGAGGCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQIHYIKPLTETMKLYSDQQQG*VGRPRP Trigger: TGGCCTGGGCCTCCCCACTCAGCCTTGTTGCTGGTC...GCTATAGAGTTTCATGGTCTCAGTTAGGGGCTTGATGTAATGTATTTGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATGCTAGGATCTGCACCCTACAGTGCACTTTCCTGGTGAGTTCCTTTGGTCAGCTGGCACATGACTaGGGTTGTTGTAGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CHARICTLQCTFLVSSFGQLAHD*GCCSLD Trigger: ATCTAAGCTACAACAACCTCAGTCATGTGCCAGCTG...ACCAAAGGAACTCACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | CTTCGTTTTCACACCCACCATATCAAATGGGTACCACATTTTAAGGGTGAAGTCGTTGCGGGTGTCCATTaGCAGGTCCGGGGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRFHTHHIKWVPHFKGEVVAGVH*QVRGYR Trigger: TCTGTACCCCCGGACCTGCCAATGGACACCCGCAAC...GACTTCACCCTTAAAATGTGGTACCCATTTGATATGGTGGGTGTGAAAACGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGTGGCTAAGCGCTTGGCGTaGAGAAAGAGGCCAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKQNIIWFRGLALCLLLVAKRLA*RKRPGG Trigger: GCCCCCTGGCCTCTTTCTCCACGCCAAGCGCTTAGC...CACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | TTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTCTATGTCATATTTTTCAGCAAGGGCTCCATaGTGCAGCCACATACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LATVEWSGRAGHSSMSYFSARAP*CSHIPM Trigger: CATGGGTATGTGGCTGCACCATGGAGCCCTTGCTGA...AAAATATGACATAGAACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCTACAGCTGGAAAGAATGGTGGCAAGTATGTGCATGGAGAAAATGGAGTGCCCAGGAGGAAGTTaGTGGCTACAGAAGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLQLERMVASMCMEKMECPGGS*WLQKRW Trigger: CCATCGCTTCTGTAGCCACCAACTTCCTCCTGGGCA...CTCCATTTTCTCCATGCACATACTTGCCACCATTCTTTCCAGCTGTAGAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR CAA 72 bp | AGAGTGCATATAGGGAAGCCTAAGCTTGGGCATCTGTaGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVHIGKPKLGHL*PVGGLCLAISL Trigger: GAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAACAGATGCCCAAGCTTAGGCTTCCCTATATGCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CAA 72 bp | GGTGCTGAGGGTGATTACTTCACAACTAGACTACAATaGGGAAGTCGCTGGGAGGTCCTTTCACTCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GAEGDYFTTRLQ*GSRWEVLSLPF Trigger: AAAGGGGAGTGAAAGGACCTCCCAGCGACTTCCCAATTGTAGTCTAGTTGTGAAGTAATCACCCTCAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | CTTCGTTTTCACACCCACCATATCAAATGGGTACCACATTTTAAGGGTGAAGTCGATTGTGGGCTAGGCTaGGGTTGCGGGTGTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LRFHTHHIKWVPHFKGEVDCGLG*GCGCPL Trigger: CAATGGACACCCGCAACCTCAGCCTAGCCCACAATC...GACTTCACCCTTAAAATGTGGTACCCATTTGATATGGTGGGTGTGAAAACGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTGATTAGATCAATGCAGATGAGTTGGATTACGACACGTTCCCCTTCTCCAGTTCCATGTAGCATGTaGGATAGCCTGGCGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: WLIRSMQMSWITTRSPSPVPCSM*DSLAVQ Trigger: CTGTACCGCCAGGCTATCTCACATGCTACATGGAAC...TGGAGAAGGGGAACGTGTCGTAATCCAACTCATCTGCATTGATCTAATCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | TTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCAGCTGGCACATGACTaGGGTTGTTGTAGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPVGGLCLAISLWLRFHTQLAHD*GCCSLD Trigger: ATCTAAGCTACAACAACCTCAGTCATGTGCCAGCTG...GGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | GTCACTCTCTGGCCTTCTTCCTGCAGACACATTCATGTGCACATATGCATGCTTAGCCCACAAATGCGATaGAGAGGTAATCATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTLWPSSCRHIHVHICMLSPQMR*RGNHPG Trigger: CCCTGGATGATTACCTCTTCATCGCATTTGTGGGCT...AAGCATGCATATGTGCACATGAATGTGTCTGCAGGAAGAAGGCCAGAGAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | CAGATCCTTCAGTTTCTCTTGCAACACAACACAGTAGAGGTACATCTCCTGTTTTCCAGGTCTCTGAGATaGACAAGGCCCTGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QILQFLLQHNTVEVHLLFSRSLR*TRPWKA Trigger: GGCCTTCCAGGGCCTTGTGCATCTCAGAGACCTGGA...AAACAGGAGATGTACCTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCTCCACAATGAATTCAACTGGAAAGTGGGAATGATAAAGACTATCTGGGCTGCAATGCGATTGTaGGCTAGGCTGAGGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PALHNEFNWKVGMIKTIWAAMRL*ARLRLR Trigger: CCGCAACCTCAGCCTAGCCCACAATCGCATTGCAGC...CCAGATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR CCA 90 bp | CTTCGTTTTCACACCCACCATATCAAATGGGTACCACATTTTAAGGGTGAAGTCCGCAGCCAGGGGTTGTaGCTCAGGTCGATATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LRFHTHHIKWVPHFKGEVRSQGL*LRSICT Trigger: GGTACATATCGACCTGAGCCACAACCCCTGGCTGCG...GACTTCACCCTTAAAATGTGGTACCCATTTGATATGGTGGGTGTGAAAACGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGATTAGATCAATGCAGATGAGTTGGATTACGACACGTTCCCCTTCTCCACCAGGAGGAAGTTGGTaGCTACAGAAGCGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLIRSMQMSWITTRSPSPPGGSW*LQKRWR Trigger: TCTCCATCGCTTCTGTAGCCACCAACTTCCTCCTGG...TGGAGAAGGGGAACGTGTCGTAATCCAACTCATCTGCATTGATCTAATCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | TTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCACCATATCAAATGGGTGTTCCATGTAGCATGTaGGATAGCCTGGCGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSNLSLASFSHPPYQMGVPCSM*DSLAVQ Trigger: CTGTACCGCCAGGCTATCTCACATGCTACATGGAAC...ACCCATTTGATATGGTGGGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | GTCACTCTCTGGCCTTCTTCCTGCAGACACATTCATGTGCACATATGCATGCTTCAGCTGGCACATGACTaGGGTTGTTGTAGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTLWPSSCRHIHVHICMLQLAHD*GCCSLD Trigger: ATCTAAGCTACAACAACCTCAGTCATGTGCCAGCTG...AAGCATGCATATGTGCACATGAATGTGTCTGCAGGAAGAAGGCCAGAGAGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | GGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCAGATGCCTTGCTCCAACGGTaGCAACAGTTGGCCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSMKDPPLKDKKLRKIPDALLQR*QQLAVM Trigger: CATCACGGCCAACTGTTGTCACCGTTGGAGCAAGGC...ATCTGGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCGTACCCGCATCAGAGTaGATCACCCCAGCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRIYERSTAQRQEIEEDTVPASE*ITPAAK Trigger: CTTGGCAGCTGGGGTGATGCACTCTGATGCGGGTAC...GGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | TTAGCCTCTACTTTCCATTCTCCAGGACATCATCTTGATTTGGTTCCCACACAGAGAACAGCCGCTGGTTaGTGCAGTCCACTACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LASTFHSPGHHLDLVPTQRTAAG*CSPLLG Trigger: ACCAAGTAGTGGACTGCAGCAACCAGCGGCTGTTCT...CTGTGTGGGAACCAAATCAAGATGATGTCCTGGAGAATGGAAAGTAGAGGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR GCA 90 bp | TTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGTGTCCAGGTCTCTGAGATaGACAAGGCCCTGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKQNIIWFRGLALCLLLVSRSLR*TRPWKA Trigger: GGCCTTCCAGGGCCTTGTGCATCTCAGAGACCTGGA...CACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | GGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCAGATGGTGTCACCCATCTTTaGCAGCTGGCAGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSMKDPPLKDKKLRKIPDGVTHL*QLAAAV Trigger: CACTGCTGCTGCCAGCTGCCAAAGATGGGTGACACC...ATCTGGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099930.9 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCGTTGCGGGTGTCCATTaGCAGGTCCGGGGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIACELDQDISTLRIPVSVAGVH*QVRGYR Trigger: TCTGTACCCCCGGACCTGCCAATGGACACCCGCAAC...GGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGCAATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | GGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCAGATGCTGCAATGCGATTGTaGGCTAGGCTGAGGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSMKDPPLKDKKLRKIPDAAMRL*ARLRLR Trigger: CCGCAACCTCAGCCTAGCCCACAATCGCATTGCAGC...ATCTGGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | CAGATCCTTCAGTTTCTCTTGCAACACAACACAGTAGAGGTACATCTCCTGTTTTGCCCAGGAGGAAGTTaGTGGCTACAGAAGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QILQFLLQHNTVEVHLLFCPGGS*WLQKRW Trigger: CCATCGCTTCTGTAGCCACCAACTTCCTCCTGGGCA...AAACAGGAGATGTACCTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTCAAGTTTCCATGGGAATCCTGGTGAAAATGGAAAAGAAGGTGGTATCGCCTTGCTCCAACGGTaGCAACAGTTGGCCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISSSFHGNPGENGKEGGIALLQR*QQLAVM Trigger: CATCACGGCCAACTGTTGTCACCGTTGGAGCAAGGC...GATACCACCTTCTTTTCCATTTTCACCAGGATTCCCATGGAAACTTGAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR GCA 90 bp | CAGATCCTTCAGTTTCTCTTGCAACACAACACAGTAGAGGTACATCTCCTGTTTAGAACAGCCGCTGGTTaGTGCAGTCCACTACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QILQFLLQHNTVEVHLLFRTAAG*CSPLLG Trigger: ACCAAGTAGTGGACTGCAGCAACCAGCGGCTGTTCT...AAACAGGAGATGTACCTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | GTACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTCCCATCTTTGGCAGCTaGCAGCAGCAGTGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPFETKYNLVPWLGSVSIPIFGS*QQQCCR Trigger: CCTACAGCACTGCTGCTGCCAGCTGCCAAAGATGGG...AATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099930.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTCAAGTTTCCATGGGAATCCTGGTGAAAATGGAAAAGAAGGTGGTATCCCCATCTTTGGCAGCTaGCAGCAGCAGTGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSSFHGNPGENGKEGGIPIFGS*QQQCCR Trigger: CCTACAGCACTGCTGCTGCCAGCTGCCAAAGATGGG...GATACCACCTTCTTTTCCATTTTCACCAGGATTCCCATGGAAACTTGAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CCA 90 bp | GTATACAAAACAAGACAAGGTTCCCTAGCTTGGAGGAATGAACAAAGGTATCTTGGTGTCACCCATCTTTaGCAGCTGGCAGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VYKTRQGSLAWRNEQRYLGVTHL*QLAAAV Trigger: CACTGCTGCTGCCAGCTGCCAAAGATGGGTGACACC...AAGATACCTTTGTTCATTCCTCCAAGCTAGGGAACCTTGTCTTGTTTTGTATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTCCTGAGCAGCTAGACAAATGGGCAGGGTGCTTATTTGTTTATCAACTTGCTGCAATGCGATTGTaGGCTAGGCTGAGGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IFPEQLDKWAGCLFVYQLAAMRL*ARLRLR Trigger: CCGCAACCTCAGCCTAGCCCACAATCGCATTGCAGC...AAGTTGATAAACAAATAAGCACCCTGCCCATTTGTCTAGCTGCTCAGGAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CCA 90 bp | GTATACAAAACAAGACAAGGTTCCCTAGCTTGGAGGAATGAACAAAGGTATCTTCGCAGCCAGGGGTTGTaGCTCAGGTCGATATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VYKTRQGSLAWRNEQRYLRSQGL*LRSICT Trigger: GGTACATATCGACCTGAGCCACAACCCCTGGCTGCG...AAGATACCTTTGTTCATTCCTCCAAGCTAGGGAACCTTGTCTTGTTTTGTATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCAGGGTCAGAGTCAGGTaGCAGGCCTTGAAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRIYERSTAQRQEIEEDTRVRVR*QALKLS Trigger: AGAGAGCTTCAAGGCCTGCCACCTGACTCTGACCCT...GGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CAA 72 bp | AGAAAGCTCTTGTTTCATTTTCTTACCAAGCCAGCCTaGCTAACAGGACTGGGACTACCCAGATGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKLLFHFLTKPA*LTGLGLPRWIS Trigger: GGAGATCCATCTGGGTAGTCCCAGTCCTGTTAGCAAGGCTGGCTTGGTAAGAAAATGAAACAAGAGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| 3UTR CAA 72 bp | CAACTCCCAACCAGTGCCATGATTTACAAAAGGTCCTaGGGTCTTGCCTCCTTTACTTCCTTTTGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLPTSAMIYKRS*GLASFTSFCLL Trigger: AAGGAGGCAAAAGGAAGTAAAGGAGGCAAGACCCAAGGACCTTTTGTAAATCATGGCACTGGTTGGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR TCA 90 bp | GCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATGTTCCATGTAGCATGTaGGATAGCCTGGCGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: ACELDQDISTLRIPVSSHVPCSM*DSLAVQ Trigger: CTGTACCGCCAGGCTATCTCACATGCTACATGGAAC...ATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | CAGATCCTTCAGTTTCTCTTGCAACACAACACAGTAGAGGTACATCTCCTGTTTAGCCCACAAATGCGATaGAGAGGTAATCATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QILQFLLQHNTVEVHLLFSPQMR*RGNHPG Trigger: CCCTGGATGATTACCTCTTCATCGCATTTGTGGGCT...AAACAGGAGATGTACCTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | GATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATGGAAATAAGAATGCCTTGCTCCAACGGTaGCAACAGTTGGCCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: DQDISTLRIPVSSHGNKNALLQR*QQLAVM Trigger: CATCACGGCCAACTGTTGTCACCGTTGGAGCAAGGC...ATTCTTATTTCCATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | GTACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTTCAGCAAGGGCTCCATaGTGCAGCCACATACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VPFETKYNLVPWLGSVSISARAP*CSHIPM Trigger: CATGGGTATGTGGCTGCACCATGGAGCCCTTGCTGA...AATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCAAATACATTACATCAAGCCCCTAACTGAGACCATGAAACTCTATAGCTCAGCAAGGGCTCCATaGTGCAGCCACATACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLQIHYIKPLTETMKLYSSARAP*CSHIPM Trigger: CATGGGTATGTGGCTGCACCATGGAGCCCTTGCTGA...GCTATAGAGTTTCATGGTCTCAGTTAGGGGCTTGATGTAATGTATTTGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CCA 90 bp | GTACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTAGGGTCAGAGTCAGGTaGCAGGCCTTGAAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPFETKYNLVPWLGSVSIRVRVR*QALKLS Trigger: AGAGAGCTTCAAGGCCTGCCACCTGACTCTGACCCT...AATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTCAAGTTTCCATGGGAATCCTGGTGAAAATGGAAAAGAAGGTGGTATCAGGGTCAGAGTCAGGTaGCAGGCCTTGAAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSSFHGNPGENGKEGGIRVRVR*QALKLS Trigger: AGAGAGCTTCAAGGCCTGCCACCTGACTCTGACCCT...GATACCACCTTCTTTTCCATTTTCACCAGGATTCCCATGGAAACTTGAAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGTGCCAGGAGGAAGTTGGTaGCTACAGAAGCGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKQNIIWFRGLALCLLLVPGGSW*LQKRWR Trigger: TCTCCATCGCTTCTGTAGCCACCAACTTCCTCCTGG...CACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CAA 72 bp | CCACATTTTAAGGGTGAAGTCATGAGGCTTAAAGATTaGCCTTGCCAAGACCCGATCATCTCTCATCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHFKGEVMRLKD*PCQDPIISHLG Trigger: ACCGAGATGAGAGATGATCGGGTCTTGGCAAGGCAAATCTTTAAGCCTCATGACTTCACCCTTAAAATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CAA 72 bp | ATGGATGCTCATACAAAGTTAGCTTTCCAACCTTGTTaGAGCTATGATGGAGATGGCCAGGGCACCGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: MDAHTKLAFQPC*SYDGDGQGTVI Trigger: TATCACGGTGCCCTGGCCATCTCCATCATAGCTCAAACAAGGTTGGAAAGCTAACTTTGTATGAGCATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | CAGATCCTTCAGTTTCTCTTGCAACACAACACAGTAGAGGTACATCTCCTGTTTATATGTACCAGTCCATaGGCTTCCCGGAACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QILQFLLQHNTVEVHLLFICTSP*ASRNMS Trigger: TGACATGTTCCGGGAAGCTCATGGACTGGTACATAT...AAACAGGAGATGTACCTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAACTGGTGAGTTCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATATGTACCAGTCCATaGGCTTCCCGGAACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TELVSSRIYERSTAQRQEICTSP*ASRNMS Trigger: TGACATGTTCCGGGAAGCTCATGGACTGGTACATAT...TTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGAACTCACCAGTTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | CATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTAGAACAGCCGCTGGTTaGTGCAGTCCACTACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLKQNIIWFRGLALCLLLRTAAG*CSPLLG Trigger: ACCAAGTAGTGGACTGCAGCAACCAGCGGCTGTTCT...AAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCCCAGGAGGAAGTTGGTaGCTACAGAAGCGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIACELDQDISTLRIPVSPGGSW*LQKRWR Trigger: TCTCCATCGCTTCTGTAGCCACCAACTTCCTCCTGG...GGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGCAATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CAA 72 bp | GGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATaGAGGAAGATACCAGATGTCACTCTCTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSMKDPPLKDKK*RKIPDVTLWPS Trigger: AGAAGGCCAGAGAGTGACATCTGGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CAA 72 bp | CCTCCGCTTGGCTTCCCTCACTCTATGCTCAGAGTATaGGCATTTTGTCATAAGAGGATGTTTTGGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLGFPHSMLRV*AFCHKRMFWNC Trigger: ACAATTCCAAAACATCCTCTTATGACAAAATGCCAATACTCTGAGCATAGAGTGAGGGAAGCCAAGCGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | AATGGGCAGGGTGCTTATTTGTTTATCAACTTGATAACTGAGTGGACTGTGTTAAGCCCACAAATGCGATaGAGAGGTAATCATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGQGAYLFINLITEWTVLSPQMR*RGNHPG Trigger: CCCTGGATGATTACCTCTTCATCGCATTTGTGGGCT...TAACACAGTCCACTCAGTTATCAAGTTGATAAACAAATAAGCACCCTGCCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTTGTTTCATTTTCTTACCAAGCCAGCCTTGCTAACAGGACTGGGACTCACAAAGCCCACAAATaGGATGAAGAGGTAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: KALVSFSYQASLANRTGTHKAHK*DEEVII Trigger: GATGATTACCTCTTCATCGCATTTGTGGGCTTTGTG...AGTCCCAGTCCTGTTAGCAAGGCTGGCTTGGTAAGAAAATGAAACAAGAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR TCA 90 bp | ATATTTCCTGAGCAGCTAGACAAATGGGCAGGGTGCTTATTTGTTTATCAACTTCAGCTGGCACATGACTaGGGTTGTTGTAGCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IFPEQLDKWAGCLFVYQLQLAHD*GCCSLD Trigger: ATCTAAGCTACAACAACCTCAGTCATGTGCCAGCTG...AAGTTGATAAACAAATAAGCACCCTGCCCATTTGTCTAGCTGCTCAGGAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR TCA 90 bp | TCTATTGCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCATATGTACCAGTCCATaGGCTTCCCGGAACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIACELDQDISTLRIPVSICTSP*ASRNMS Trigger: TGACATGTTCCGGGAAGCTCATGGACTGGTACATAT...GGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGCAATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | CATGCTACCTTCTCTGAGCCTGATGACCTTATCTGCCAAATGGGAACAATAAATCACAAAGCCCACAAATaGGATGAAGAGGTAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: HATFSEPDDLICQMGTINHKAHK*DEEVII Trigger: GATGATTACCTCTTCATCGCATTTGTGGGCTTTGTG...ATTTATTGTTCCCATTTGGCAGATAAGGTCATCAGGCTCAGAGAAGGTAGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CAA 72 bp | AATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATaGCTTGTGAACTTGATCAAGACATTTCAACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NIIWFRGLALCL*LVNLIKTFQLS Trigger: GGAGAGTTGAAATGTCTTGATCAAGTTCACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR GCA 90 bp | GCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATCACAAAGCCCACAAATaGGATGAAGAGGTAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: ACELDQDISTLRIPVSSHHKAHK*DEEVII Trigger: GATGATTACCTCTTCATCGCATTTGTGGGCTTTGTG...ATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| 3UTR CAA 72 bp | ATGGTGGCAAGTATGTGCATGGAGAAAATGGAGCTCTaGACCTTTTTCAAAGGTTGGAATGAAATTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MVASMCMEKMEL*TFFKGWNEIQV Trigger: GACTTGAATTTCATTCCAACCTTTGAAAAAGGTCAAGAGCTCCATTTTCTCCATGCACATACTTGCCACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| 3UTR CAA 72 bp | TTCATATTTCCTCAGAGGAGTCACCTGTCATACTCTTaGTTCATGCAGATAATTTGGATAAGCATCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIFPQRSHLSYS*FMQIIWISIPA Trigger: AGCTGGGATGCTTATCCAAATTATCTGCATGAACAAAGAGTATGACAGGTGACTCCTCTGAGGAAATATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| 3UTR CAA 72 bp | TACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTaGGCTCTGTGTCTATTGCTTGTGAACTTGATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YHLKQNIIWFRG*ALCLLLVNLIK Trigger: CTTGATCAAGTTCACAAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | TGCCCCGGTTACTGCCATGCTAGGATCTGCACCCTACAGTGCACTTTCCTGGTGGGTTGCGGGTGTCCATaGGCAGGTCCGGGGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: CPGYCHARICTLQCTFLVGCGCP*AGPGVQ Trigger: CTGTACCCCCGGACCTGCCAATGGACACCCGCAACC...CACCAGGAAAGTGCACTGTAGGGTGCAGATCCTAGCATGGCAGTAACCGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS GCA 90 bp | AGCGCTGTATCCGATTCCGCAGCCACTTCAGCAAGGGCTCCATGGTaGAGCCACATACCCATGGGTTACCCCCGATCTGTAGGGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SAVSDSAATSARAPW*SHIPMGYPRSVGSP Trigger: TGGTGACCCTACAGATCGGGGGTAACCCATGGGTATGTGGCTGCACCATGGAGCCCTTGCTGAAGTGGCTGCGGAATCGGATACAGCGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS CCA 90 bp | TACAGCGCTGTATCCGATTCCGCAGCCACTTCAGCAAGGGCTCCATaGTGCAGCCACATACCCATGGGTTACCCCCGATCTGTAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YSAVSDSAATSARAP*CSHIPMGYPRSVGS Trigger: TGACCCTACAGATCGGGGGTAACCCATGGGTATGTGGCTGCACCATGGAGCCCTTGCTGAAGTGGCTGCGGAATCGGATACAGCGCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS GCA 90 bp | TGTCCATTGGCAGGTCCGGGGGTACAGAGAACAGCCGCTGGTTGCTaGAGTCCACTACTTGGTTACGACATGTACAAAGGACTGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CPLAGPGVQRTAAGC*SPLLGYDMYKGLGN Trigger: GTTGCCCAGTCCTTTGTACATGTCGTAACCAAGTAGTGGACTGCAGCAACCAGCGGCTGTTCTCTGTACCCCCGGACCTGCCAATGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS TCA 90 bp | AGGAGTTGTTTCGCAAATCCAGCACGCGGAGTTCCATGTAGCATGTaGGATAGCCTGGCGGTACAGCTGCAATGCGATTGTGGGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSCFANPARGVPCSM*DSLAVQLQCDCGLG Trigger: GCCTAGCCCACAATCGCATTGCAGCTGTACCGCCAGGCTATCTCACATGCTACATGGAACTCCGCGTGCTGGATTTGCGAAACAACTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | GCTAGAGTCTACCATTGTTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTCAGGTGGCAGGCCTaGAAGCTCTCTTCAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARVYHCWPQLSGQGEQGIVRWQA*KLSSVS Trigger: ACTCACTGAAGAGAGCTTCAAGGCCTGCCACCTGAC...TATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAACAATGGTAGACTCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS TCA 90 bp | GTACCAGTCCATGAGCTTCCCGGAACATGTCAGCTGGCACATGACTaGGGTTGTTGTAGCTTAGATCCAGGTGTGCTAAGCGCTTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VPVHELPGTCQLAHD*GCCSLDPGVLSAWR Trigger: ACGCCAAGCGCTTAGCACACCTGGATCTAAGCTACAACAACCTCAGTCATGTGCCAGCTGACATGTTCCGGGAAGCTCATGGACTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS GCA 90 bp | TTACGACATGTACAAAGGACTGGGCAACTGGTACCCGCATCAGAGTaGATCACCCCAGCTGCCAAGAGGAAGAAGACCAGCAACAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRHVQRTGQLVPASE*ITPAAKRKKTSNKA Trigger: AGCCTTGTTGCTGGTCTTCTTCCTCTTGGCAGCTGGGGTGATGCACTCTGATGCGGGTACCAGTTGCCCAGTCCTTTGTACATGTCGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS GCA 90 bp | GAAGTTGGTGGCTACAGAAGCGATGGAGACCACAAAGCCCACAAATaGGATGAAGAGGTAATCATCCAGGGTCAGAGTCAGGTGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EVGGYRSDGDHKAHK*DEEVIIQGQSQVAG Trigger: GCCTGCCACCTGACTCTGACCCTGGATGATTACCTCTTCATCGCATTTGTGGGCTTTGTGGTCTCCATCGCTTCTGTAGCCACCAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS CCA 90 bp | TGCAGTCCACTACTTGGTTACGACATGTACAAAGGACTGGGCAACTaGTACCCGCATCAGAGTGCATCACCCCAGCTGCCAAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSPLLGYDMYKGLGN*YPHQSASPQLPRGR Trigger: TCTTCCTCTTGGCAGCTGGGGTGATGCACTCTGATGCGGGTACCAGTTGCCCAGTCCTTTGTACATGTCGTAACCAAGTAGTGGACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | GCATCTGTTGCCTGTTGGAGGCCTTTGCTTAGCAATCTCTCTCTGGCTTCGTTTAGGTGTGCTAAGCGCTaGGCGTGGAGAAAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASVACWRPLLSNLSLASFRCAKR*AWRKRP Trigger: TGGCCTCTTTCTCCACGCCAAGCGCTTAGCACACCT...AAACGAAGCCAGAGAGAGATTGCTAAGCAAAGGCCTCCAACAGGCAACAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCTCTTCTACAGCTGGAAAGAATGGTGGCAAGTATGTGCATGGAGAAAAGGTTGCGGGTGTCCATaGGCAGGTCCGGGGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: FVLFYSWKEWWQVCAWRKGCGCP*AGPGVQ Trigger: CTGTACCCCCGGACCTGCCAATGGACACCCGCAACC...TTTTCTCCATGCACATACTTGCCACCATTCTTTCCAGCTGTAGAAGAGCACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCTCTTGTTTCATTTTCTTACCAAGCCAGCCTTGCTAACAGGACTGGGACTTGGGCTAGGCTGAGGTaGCGGGTGTCCATTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KALVSFSYQASLANRTGTWARLR*RVSIGR Trigger: CCTGCCAATGGACACCCGCAACCTCAGCCTAGCCCA...AGTCCCAGTCCTGTTAGCAAGGCTGGCTTGGTAAGAAAATGAAACAAGAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR CAA 90 bp | CTATGGACCCAACTCCCAACCAGTGCCATGATTTACAAAAGGTCCTTGGGTCTTAGGTGTGCTAAGCGCTaGGCGTGGAGAAAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LWTQLPTSAMIYKRSLGLRCAKR*AWRKRP Trigger: TGGCCTCTTTCTCCACGCCAAGCGCTTAGCACACCT...AAGACCCAAGGACCTTTTGTAAATCATGGCACTGGTTGGGAGTTGGGTCCATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCTCCACAATGAATTCAACTGGAAAGTGGGAATGATAAAGACTATCTGGTGGGCTAGGCTGAGGTaGCGGGTGTCCATTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PALHNEFNWKVGMIKTIWWARLR*RVSIGR Trigger: CCTGCCAATGGACACCCGCAACCTCAGCCTAGCCCA...CCAGATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR CAA 90 bp | ACTGAACTGGTGAGTTCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAATGGGCTAGGCTGAGGTaGCGGGTGTCCATTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TELVSSRIYERSTAQRQEWARLR*RVSIGR Trigger: CCTGCCAATGGACACCCGCAACCTCAGCCTAGCCCA...TTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGAACTCACCAGTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | AAAGCTCTTGTTTCATTTTCTTACCAAGCCAGCCTTGCTAACAGGACTGGGACTCTCCGCAGCCAGGGGTaGTGGCTCAGGTCGATATGT | + |
|
Preference number: 5 (lower is better) Translates to: KALVSFSYQASLANRTGTLRSQG*WLRSIC Trigger: ACATATCGACCTGAGCCACAACCCCTGGCTGCGGAG...AGTCCCAGTCCTGTTAGCAAGGCTGGCTTGGTAAGAAAATGAAACAAGAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR CAA 90 bp | TACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGGGTTGCGGGTGTCCATaGGCAGGTCCGGGGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: YHLKQNIIWFRGLALCLLGCGCP*AGPGVQ Trigger: CTGTACCCCCGGACCTGCCAATGGACACCCGCAACC...CAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | TCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCTGGGCTAGGCTGAGGTaGCGGGTGTCCATTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRIYERSTAQRQEIEEDTWARLR*RVSIGR Trigger: CCTGCCAATGGACACCCGCAACCTCAGCCTAGCCCA...GGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | TTGGCCACAGTTGAGTGGTCAGGGAGAGCAGGGCATAGTTCTATGTCATATTTTACAGCTGCAATGCGATaGTGGGCTAGGCTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LATVEWSGRAGHSSMSYFTAAMR*WARLRL Trigger: CAACCTCAGCCTAGCCCACAATCGCATTGCAGCTGT...AAAATATGACATAGAACTATGCCCTGCTCTCCCTGACCACTCAACTGTGGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111601.2 ENSMUST00000234267.3 |
||
| CDS-3UTR CAA 90 bp | TATCTAGAGGACAACCATAGGGGCATGGTCCAGAATGGTGTGGTGCATATGTGGAGCTCCATCAAGGAGTaGTTTCGCAAATCCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: YLEDNHRGMVQNGVVHMWSSIKE*FRKSST Trigger: CGTGCTGGATTTGCGAAACAACTCCTTGATGGAGCT...CCACATATGCACCACACCATTCTGGACCATGCCCCTATGGTTGTCCTCTAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
||
| CDS-3UTR CAA 90 bp | GCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATCTCCGCAGCCAGGGGTaGTGGCTCAGGTCGATATGT | + |
|
Preference number: 5 (lower is better) Translates to: ACELDQDISTLRIPVSSHLRSQG*WLRSIC Trigger: ACATATCGACCTGAGCCACAACCCCTGGCTGCGGAG...ATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | TCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCAGGTGTCACCCATCTTaGGCAGCTGGCAGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRIYERSTAQRQEIEEDTRCHPS*AAGSSS Trigger: ACTGCTGCTGCCAGCTGCCAAAGATGGGTGACACCT...GGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099930.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCTCCACAATGAATTCAACTGGAAAGTGGGAATGATAAAGACTATCTGGACAGCTGCAATGCGATaGTGGGCTAGGCTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PALHNEFNWKVGMIKTIWTAAMR*WARLRL Trigger: CAACCTCAGCCTAGCCCACAATCGCATTGCAGCTGT...CCAGATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
||
| CDS-3UTR CAA 90 bp | CTTCGTTTTCACACCCACCATATCAAATGGGTACCACATTTTAAGGGTGAAGTCACAGCTGCAATGCGATaGTGGGCTAGGCTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRFHTHHIKWVPHFKGEVTAAMR*WARLRL Trigger: CAACCTCAGCCTAGCCCACAATCGCATTGCAGCTGT...GACTTCACCCTTAAAATGTGGTACCCATTTGATATGGTGGGTGTGAAAACGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | TCTAGGATCTATGAAAGATCCACCGCTCAAAGACAAGAAATTGAGGAAGATACCAGGTGTGCTAAGCGCTaGGCGTGGAGAAAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRIYERSTAQRQEIEEDTRCAKR*AWRKRP Trigger: TGGCCTCTTTCTCCACGCCAAGCGCTTAGCACACCT...GGTATCTTCCTCAATTTCTTGTCTTTGAGCGGTGGATCTTTCATAGATCCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
||
| CDS-3UTR CAA 90 bp | TACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTCCGCAGCCAGGGGTaGTGGCTCAGGTCGATATGT | + |
|
Preference number: 5 (lower is better) Translates to: YHLKQNIIWFRGLALCLLLRSQG*WLRSIC Trigger: ACATATCGACCTGAGCCACAACCCCTGGCTGCGGAG...CAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| CDS-3UTR CAA 90 bp | AATGGGCAGGGTGCTTATTTGTTTATCAACTTGATAACTGAGTGGACTGTGTTACTCCGCAGCCAGGGGTaGTGGCTCAGGTCGATATGT | + |
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Preference number: 5 (lower is better) Translates to: NGQGAYLFINLITEWTVLLRSQG*WLRSIC Trigger: ACATATCGACCTGAGCCACAACCCCTGGCTGCGGAG...TAACACAGTCCACTCAGTTATCAAGTTGATAAACAAATAAGCACCCTGCCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| CDS-3UTR CAA 90 bp | CCAGCTCTCCACAATGAATTCAACTGGAAAGTGGGAATGATAAAGACTATCTGGGTCAGGTGGCAGGCCTaGAAGCTCTCTTCAGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: PALHNEFNWKVGMIKTIWVRWQA*KLSSVS Trigger: ACTCACTGAAGAGAGCTTCAAGGCCTGCCACCTGAC...CCAGATAGTCTTTATCATTCCCACTTTCCAGTTGAATTCATTGTGGAGAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| CDS-3UTR CAA 90 bp | GTATACAAAACAAGACAAGGTTCCCTAGCTTGGAGGAATGAACAAAGGTATCTTAGGTGTCACCCATCTTaGGCAGCTGGCAGCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: VYKTRQGSLAWRNEQRYLRCHPS*AAGSSS Trigger: ACTGCTGCTGCCAGCTGCCAAAGATGGGTGACACCT...AAGATACCTTTGTTCATTCCTCCAAGCTAGGGAACCTTGTCTTGTTTTGTATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111601.2 |
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| CDS-3UTR CAA 90 bp | GCTTGTGAACTTGATCAAGACATTTCAACTCTCCGAATTCCAGTTTCCTCACATACAGCTGCAATGCGATaGTGGGCTAGGCTGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ACELDQDISTLRIPVSSHTAAMR*WARLRL Trigger: CAACCTCAGCCTAGCCCACAATCGCATTGCAGCTGT...ATGTGAGGAAACTGGAATTCGGAGAGTTGAAATGTCTTGATCAAGTTCACAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| CDS-3UTR CAA 90 bp | TTGCTTAGCAATCTCTCTCTGGCTTCGTTTTCACACCCACCATATCAAATGGGTAGCTCCATCAAGGAGTaGTTTCGCAAATCCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: LLSNLSLASFSHPPYQMGSSIKE*FRKSST Trigger: CGTGCTGGATTTGCGAAACAACTCCTTGATGGAGCT...ACCCATTTGATATGGTGGGTGTGAAAACGAAGCCAGAGAGAGATTGCTAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| CDS-3UTR CAA 90 bp | CAGATCCTTCAGTTTCTCTTGCAACACAACACAGTAGAGGTACATCTCCTGTTTAGCTCCATCAAGGAGTaGTTTCGCAAATCCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: QILQFLLQHNTVEVHLLFSSIKE*FRKSST Trigger: CGTGCTGGATTTGCGAAACAACTCCTTGATGGAGCT...AAACAGGAGATGTACCTCTACTGTGTTGTGTTGCAAGAGAAACTGAAGGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS-3UTR CAA 90 bp | AGGATGTTTTGGAATTGTTTTCCTTTATTAGAAGTAAGTACCTCAAGGGCAGGAAGGTGTGCTAAGCGCTaGGCGTGGAGAAAGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RMFWNCFPLLEVSTSRAGRCAKR*AWRKRP Trigger: TGGCCTCTTTCTCCACGCCAAGCGCTTAGCACACCT...TCCTGCCCTTGAGGTACTTACTTCTAATAAAGGAAAACAATTCCAAAACATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234267.3 |
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| CDS-3UTR CAA 90 bp | TACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGGTCAGGTGGCAGGCCTaGAAGCTCTCTTCAGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: YHLKQNIIWFRGLALCLLVRWQA*KLSSVS Trigger: ACTCACTGAAGAGAGCTTCAAGGCCTGCCACCTGAC...CAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| CDS-3UTR CAA 90 bp | CATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTGCTTGTCAGGTGGCAGGCCTaGAAGCTCTCTTCAGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: HLKQNIIWFRGLALCLLLVRWQA*KLSSVS Trigger: ACTCACTGAAGAGAGCTTCAAGGCCTGCCACCTGAC...AAGCAATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| CDS-3UTR CAA 90 bp | GTACCATTTGAAACAAAATATAATCTGGTTCCGTGGCTTGGCTCTGTGTCTATTAGCTCCATCAAGGAGTaGTTTCGCAAATCCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: VPFETKYNLVPWLGSVSISSIKE*FRKSST Trigger: CGTGCTGGATTTGCGAAACAACTCCTTGATGGAGCT...AATAGACACAGAGCCAAGCCACGGAACCAGATTATATTTTGTTTCAAATGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099930.9 ENSMUST00000234905.3 |
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| CDS TCA 72 bp | CTGGCGGTACAGCTGCAATGCGATTGTGGGCTAGGCTaGGGTTGCGGGTGTCCATTGGCAGGTCCGGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LAVQLQCDCGLG*GCGCPLAGPGV Trigger: TACCCCCGGACCTGCCAATGGACACCCGCAACCTCAGCCTAGCCCACAATCGCATTGCAGCTGTACCGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS CAA 72 bp | GGTACAGCTGCAATGCGATTGTGGGCTAGGCTGAGGTaGCGGGTGTCCATTGGCAGGTCCGGGGGTACAGAG | + |
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Preference number: 6 (lower is better) Translates to: GTAAMRLWARLR*RVSIGRSGGTE Trigger: CTCTGTACCCCCGGACCTGCCAATGGACACCCGCAACCTCAGCCTAGCCCACAATCGCATTGCAGCTGTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS TCA 72 bp | CCCTCAACTTCAGGGGGTCCCCGACACTCAGCAAGCTaGGAATCCGCTGTACAGCGCTGTATCCGATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PSTSGGPRHSAS*ESAVQRCIRFR Trigger: GCGGAATCGGATACAGCGCTGTACAGCGGATTCTCAGCTTGCTGAGTGTCGGGGACCCCCTGAAGTTGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS GCA 72 bp | TCCGATTCCGCAGCCACTTCAGCAAGGGCTCCATGGTaGAGCCACATACCCATGGGTTACCCCCGATCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SDSAATSARAPW*SHIPMGYPRSV Trigger: TACAGATCGGGGGTAACCCATGGGTATGTGGCTGCACCATGGAGCCCTTGCTGAAGTGGCTGCGGAATCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS CCA 72 bp | GTATCCGATTCCGCAGCCACTTCAGCAAGGGCTCCATaGTGCAGCCACATACCCATGGGTTACCCCCGATCT | + |
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Preference number: 6 (lower is better) Translates to: VSDSAATSARAP*CSHIPMGYPRS Trigger: AGATCGGGGGTAACCCATGGGTATGTGGCTGCACCATGGAGCCCTTGCTGAAGTGGCTGCGGAATCGGATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS GCA 72 bp | GTACAAAGGACTGGGCAACTGGTACCCGCATCAGAGTaGATCACCCCAGCTGCCAAGAGGAAGAAGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: VQRTGQLVPASE*ITPAAKRKKTS Trigger: GCTGGTCTTCTTCCTCTTGGCAGCTGGGGTGATGCACTCTGATGCGGGTACCAGTTGCCCAGTCCTTTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS GCA 72 bp | GCAGGTCCGGGGGTACAGAGAACAGCCGCTGGTTGCTaGAGTCCACTACTTGGTTACGACATGTACAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: AGPGVQRTAAGC*SPLLGYDMYKG Trigger: TCCTTTGTACATGTCGTAACCAAGTAGTGGACTGCAGCAACCAGCGGCTGTTCTCTGTACCCCCGGACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS GCA 72 bp | TTGGCAGGTCCGGGGGTACAGAGAACAGCCGCTGGTTaGTGCAGTCCACTACTTGGTTACGACATGTACAAA | + |
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Preference number: 6 (lower is better) Translates to: LAGPGVQRTAAG*CSPLLGYDMYK Trigger: TTTGTACATGTCGTAACCAAGTAGTGGACTGCAGCAACCAGCGGCTGTTCTCTGTACCCCCGGACCTGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS TCA 72 bp | TTCGCAAATCCAGCACGCGGAGTTCCATGTAGCATGTaGGATAGCCTGGCGGTACAGCTGCAATGCGATTGT | + |
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Preference number: 6 (lower is better) Translates to: FANPARGVPCSM*DSLAVQLQCDC Trigger: ACAATCGCATTGCAGCTGTACCGCCAGGCTATCTCACATGCTACATGGAACTCCGCGTGCTGGATTTGCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS TCA 72 bp | CAGAAGCGATGGAGACCACAAAGCCCACAAATGCGATaGAGAGGTAATCATCCAGGGTCAGAGTCAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QKRWRPQSPQMR*RGNHPGSESGG Trigger: GCCACCTGACTCTGACCCTGGATGATTACCTCTTCATCGCATTTGTGGGCTTTGTGGTCTCCATCGCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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| CDS GCA 72 bp | GGCTACAGAAGCGATGGAGACCACAAAGCCCACAAATaGGATGAAGAGGTAATCATCCAGGGTCAGAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: GYRSDGDHKAHK*DEEVIIQGQSQ Trigger: CTGACTCTGACCCTGGATGATTACCTCTTCATCGCATTTGTGGGCTTTGTGGTCTCCATCGCTTCTGTAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099930.9 ENSMUST00000111601.2 ENSMUST00000234267.3 ENSMUST00000234905.3 |
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