Pregenerated sensors for LRRC52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040485Ensembl transcript IDs: ENSMUST00000036643.6
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGCAGCACATACACCCGTaGGCCAGGCAGCCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLEGFSLQDSDGKMGGQEQHIHP*ARQPPC Trigger: GCACGGTGGCTGCCTGGCTCACGGGTGTATGTGCTG...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CCA 90 bp | CTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGACAGGGAACCGACGAATaGGGCCCAAGTGTGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEGFSLQDSDGKMGGQERQGTDE*GPSVCC Trigger: GCAACACACACTTGGGCCCCATTCGTCGGTTCCCTG...TCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR TCA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGGATTCCCCACCTTCGTaGTGGGCCACCCTTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEGFSLQDSDGKMGGQEDSPPS*WATLSA Trigger: AGCTGAAAGGGTGGCCCATCACGAAGGTGGGGAATC...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCAGGCAGGTGAGGGTTGTGTaGAATGTTCAGCCGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASVSKTVMVKWEGKREIRQVRVV*NVQPHQ Trigger: CTGGTGCGGCTGAACATTTCACACAACCCTCACCTG...CCTGATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCAGGGCTGGTCCAGGTGTGTaGTGCACATGTACTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASVSKTVMVKWEGKREIRAGPGV*CTCTGV Trigger: CACTCCAGTACATGTGCATCACACACCTGGACCAGC...CCTGATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR GCA 90 bp | GAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCCAGGAAGGAGCAGTTaGATATCCAGGGGTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGFSLQDSDGKMGGQERNPGRSS*ISRGSH Trigger: GTGGGAACCCCTGGATATGCAACTGCTCCTTCCTGG...ATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CCA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGCTTAGGTACAGAGTCTaGAGCACCACCAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLEGFSLQDSDGKMGGQELRYRV*STTRWW Trigger: CCACCACCTGGTGGTGCTCCAGACTCTGTACCTAAG...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR TCA 90 bp | GGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCAGTGGACACTTGGACCCTaGTACCAACCCCATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFSLQDSDGKMGGQERNQWTLGP*YQPHSK Trigger: CTTGGAATGGGGTTGGTATCAGGGTCCAAGTGTCCA...CTGATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR TCA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGCAGGTTGGTGAGCACTaGGAAGCTGAAAGGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLEGFSLQDSDGKMGGQEQVGEH*EAERGD Trigger: ATCTCCCCTTTCAGCTTCTCAGTGCTCACCAACCTG...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR TCA 90 bp | GGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCAGGCAATCCGGTGTTTCTaGGGTCCAGGTACCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFSLQDSDGKMGGQERNQAIRCF*GPGTSK Trigger: CTTTGAGGTACCTGGACCTCAGAAACACCGGATTGC...CTGATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCAGAGCACCACCAGGTGGTaGAAGCCATTATGGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GFSLQDSDGKMGGQERNQSTTRW*KPLWSM Trigger: CATCGACCATAATGGCTTCCACCACCTGGTGGTGCT...CTGATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CCA 90 bp | CTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAGTGATGCACATGTACTaGAGTGGATTCCCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEGFSLQDSDGKMGGQERVMHMY*SGFPTF Trigger: GAAGGTGGGGAATCCACTCCAGTACATGTGCATCAC...TCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCAGACTTGTTTGGACACTTaGACCCTGATACCAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFSLQDSDGKMGGQERNQTCLDT*TLIPTP Trigger: TGGGGTTGGTATCAGGGTCCAAGTGTCCAAACAAGT...CTGATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR TCA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGGCTACTTCTTGGTCTTaGCACACACACTTGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLEGFSLQDSDGKMGGQEATSWS*HTHLFG Trigger: TCCAAACAAGTGTGTGTGTCAAGACCAAGAAGTAGC...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR TCA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGATGCAGAAGCCGATaGGCAGTAAGAAGATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLEGFSLQDSDGKMGGQERCRSR*AVRRCS Trigger: ACTACATCTTCTTACTGCTCATCGGCTTCTGCATCT...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CCA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGGGTACCTCAAAGACGTaGTGTTGGCAAAGACGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LLEGFSLQDSDGKMGGQEGTSKT*CWQRRI Trigger: AATACGTCTTTGCCAACACCACGTCTTTGAGGTACC...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CCA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGTGGGACACTAATAAGTaGATGGTGAAGTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLEGFSLQDSDGKMGGQEWDTNK*MVKSRK Trigger: CTTCCTGGACTTCACCATCCACTTATTAGTGTCCCA...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS TCA 90 bp | TCGACGTTCGGAGGGCATTCTGGTACAGCACAGCACATACACCCGTaGGCCAGGCAGCCACCGTGCCGGCAGCGAAGATGCAGAAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: STFGGHSGTAQHIHP*ARQPPCRQRRCRSR Trigger: TCGGCTTCTGCATCTTCGCTGCCGGCACGGTGGCTGCCTGGCTCACGGGTGTATGTGCTGTGCTGTACCAGAATGCCCTCCGAACGTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 90 bp | GTTTCATCTTCGGTATCATCCCCGCTCGACGTTCGGAGGGCATTCTaGTACAGCACAGCACATACACCCGTGAGCCAGGCAGCCACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSSVSSPLDVRRAF*YSTAHTPVSQAATV Trigger: CACGGTGGCTGCCTGGCTCACGGGTGTATGTGCTGTGCTGTACCAGAATGCCCTCCGAACGTCGAGCGGGGATGATACCGAAGATGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 90 bp | GATGTAGTCCTGCTGGTCCAGGTGTGTGATGCACATGTACTGGAGTaGATTCCCCACCTTCGTGATGGGCCACCCTTTCAGCTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DVVLLVQVCDAHVLE*IPHLRDGPPFQLSR Trigger: CCTGCTGAGCTGAAAGGGTGGCCCATCACGAAGGTGGGGAATCCACTCCAGTACATGTGCATCACACACCTGGACCAGCAGGACTACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 90 bp | GCAGGCTCCGTACACGTGGCGTTCTGGGCATCTGGGTGGTCCATATaGGACACTAATAAGTGGATGGTGAAGTCCAGGAAGGAGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSVHVAFWASGWSI*DTNKWMVKSRKEQL Trigger: CAACTGCTCCTTCCTGGACTTCACCATCCACTTATTAGTGTCCCATATGGACCACCCAGATGCCCAGAACGCCACGTGTACGGAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS GCA 90 bp | GTCTGGAGCACCACCAGGTGGTGGAAGCCATTATGGTCGATGATGTaGAATCCGGTGTTTCTGAGGTCCAGGTACCTCAAAGACGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VWSTTRWWKPLWSMM*NPVFLRSRYLKDVV Trigger: CACCACGTCTTTGAGGTACCTGGACCTCAGAAACACCGGATTGCACATCATCGACCATAATGGCTTCCACCACCTGGTGGTGCTCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 90 bp | TTCAGCTCAGCAGGCTCCGTACACGTGGCGTTCTGGGCATCTGGGTaGTCCATATGGGACACTAATAAGTGGATGGTGAAGTCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSSAGSVHVAFWASG*SIWDTNKWMVKSRK Trigger: CTTCCTGGACTTCACCATCCACTTATTAGTGTCCCATATGGACCACCCAGATGCCCAGAACGCCACGTGTACGGAGCCTGCTGAGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 90 bp | CTTAGGTACAGAGTCTGGAGCACCACCAGGTGGTGGAAGCCATTATaGTCGATGATGTGCAATCCGGTGTTTCTGAGGTCCAGGTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRYRVWSTTRWWKPL*SMMCNPVFLRSRYL Trigger: GAGGTACCTGGACCTCAGAAACACCGGATTGCACATCATCGACCATAATGGCTTCCACCACCTGGTGGTGCTCCAGACTCTGTACCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 90 bp | AAGGAGCAGTTGCATATCCAGGGGTTCCCACTTAGGTACAGAGTCTaGAGCACCACCAGGTGGTGGAAGCCATTATGGTCGATGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KEQLHIQGFPLRYRV*STTRWWKPLWSMMC Trigger: GCACATCATCGACCATAATGGCTTCCACCACCTGGTGGTGCTCCAGACTCTGTACCTAAGTGGGAACCCCTGGATATGCAACTGCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 90 bp | GTGGCGTTCTGGGCATCTGGGTGGTCCATATGGGACACTAATAAGTaGATGGTGAAGTCCAGGAAGGAGCAGTTGCATATCCAGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VAFWASGWSIWDTNK*MVKSRKEQLHIQGF Trigger: GAACCCCTGGATATGCAACTGCTCCTTCCTGGACTTCACCATCCACTTATTAGTGTCCCATATGGACCACCCAGATGCCCAGAACGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CAA 90 bp | CTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGATTCAGCCGCACCAGGTaGGTGAGCACTGAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEGFSLQDSDGKMGGQERFSRTR*VSTEKL Trigger: CAGCTTCTCAGTGCTCACCAACCTGGTGCGGCTGAA...TCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS TCA 90 bp | TCTGGGCATCTGGGTGGTCCATATGGGACACTAATAAGTGGATGGTaGAGTCCAGGAAGGAGCAGTTGCATATCCAGGGGTTCCCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SGHLGGPYGTLISGW*SPGRSSCISRGSHL Trigger: TAAGTGGGAACCCCTGGATATGCAACTGCTCCTTCCTGGACTTCACCATCCACTTATTAGTGTCCCATATGGACCACCCAGATGCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CAA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGTCCAGGAAGGAGCAGTaGCATATCCAGGGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLEGFSLQDSDGKMGGQESRKEQ*HIQGFP Trigger: TGGGAACCCCTGGATATGCAACTGCTCCTTCCTGGA...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CAA 90 bp | GAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCACTTGTTTGGACACTaGGACCCTGATACCAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: EGFSLQDSDGKMGGQERNHLFGH*DPDTNP Trigger: GGGGTTGGTATCAGGGTCCAAGTGTCCAAACAAGTG...ATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CAA 90 bp | CTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAGAGATGGAAGTTAGGTaGTTGGAGCTGAGGTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LEGFSLQDSDGKMGGQEREMEVR*LELRSR Trigger: CCTTGACCTCAGCTCCAACAACCTAACTTCCATCTC...TCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS TCA 90 bp | GGGTATTCCGTTAGGTGCAAATCTATGCAGGCTACTTCTTGGTCTTaGCACACACACTTGTTTGGACACTTGGACCCTGATACCAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GYSVRCKSMQATSWS*HTHLFGHLDPDTNP Trigger: GGGGTTGGTATCAGGGTCCAAGTGTCCAAACAAGTGTGTGTGTCAAGACCAAGAAGTAGCCTGCATAGATTTGCACCTAACGGAATACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CAA 90 bp | GAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATGGGCCCAAGTGTGTGTaGCTTCGAAAAATCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EGFSLQDSDGKMGGQERNGPKCV*LRKIWL Trigger: CAACCAGATTTTTCGAAGCAACACACACTTGGGCCC...ATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS TCA 90 bp | AAAGACGTGGTGTTGGCAAAGACGTATTTGTCAAGATACAACAGGTaGGGGTTGTGTGAAATGTTCAGCCGCACCAGGTTGGTGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KDVVLAKTYLSRYNR*GLCEMFSRTRLVST Trigger: AGTGCTCACCAACCTGGTGCGGCTGAACATTTCACACAACCCTCACCTGTTGTATCTTGACAAATACGTCTTTGCCAACACCACGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CAA 90 bp | TTACTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGGAAAAGAGTAACAACTaGGAGCTAGGGCCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLEGFSLQDSDGKMGGQEEKSNN*ELGPEA Trigger: TGCTTCAGGCCCTAGCTCCAAGTTGTTACTCTTTTC...CTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CAA 90 bp | CTAGAGGGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGATATGCAGGCTACTTCTaGGTCTTGACACACACACTT | + |
|
Preference number: 5 (lower is better) Translates to: LEGFSLQDSDGKMGGQERYAGYF*VLTHTL Trigger: AAGTGTGTGTGTCAAGACCAAGAAGTAGCCTGCATA...TCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCCCTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS-3UTR CAA 90 bp | GGCTTCAGTCTCCAAGACAGTGATGGTAAAATGGGAGGGCAAGAGAGAAATCAGCTCAAAGACGTGGTGTaGGCAAAGACGTATTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GFSLQDSDGKMGGQERNQLKDVV*AKTYLS Trigger: TGACAAATACGTCTTTGCCAACACCACGTCTTTGAG...CTGATTTCTCTCTTGCCCTCCCATTTTACCATCACTGTCTTGGAGACTGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 90 bp | TGCAGGCTACTTCTTGGTCTTGACACACACACTTGTTTGGACACTTaGACCCTGATACCAACCCCATTCCAAGAGAAAAGAGTAACAACT | + |
|
Preference number: 5 (lower is better) Translates to: CRLLLGLDTHTCLDT*TLIPTPFQEKRVTT Trigger: AGTTGTTACTCTTTTCTCTTGGAATGGGGTTGGTATCAGGGTCCAAGTGTCCAAACAAGTGTGTGTGTCAAGACCAAGAAGTAGCCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | TGGGCCACCCTTTCAGCTCAGCAGGCTCCGTACACGTaGCGTTCTGGGCATCTGGGTGGTCCATATGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: WATLSAQQAPYT*RSGHLGGPYGT Trigger: TGTCCCATATGGACCACCCAGATGCCCAGAACGCCACGTGTACGGAGCCTGCTGAGCTGAAAGGGTGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | TCGGTATCATCCCCGCTCGACGTTCGGAGGGCATTCTaGTACAGCACAGCACATACACCCGTGAGCCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVSSPLDVRRAF*YSTAHTPVSQA Trigger: TGCCTGGCTCACGGGTGTATGTGCTGTGCTGTACCAGAATGCCCTCCGAACGTCGAGCGGGGATGATACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS TCA 72 bp | CAGCCACCGTGCCGGCAGCGAAGATGCAGAAGCCGATaGGCAGTAAGAAGATGTAGTCCTGCTGGTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QPPCRQRRCRSR*AVRRCSPAGPG Trigger: ACCTGGACCAGCAGGACTACATCTTCTTACTGCTCATCGGCTTCTGCATCTTCGCTGCCGGCACGGTGGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | CTGCTGGTCCAGGTGTGTGATGCACATGTACTGGAGTaGATTCCCCACCTTCGTGATGGGCCACCCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLVQVCDAHVLE*IPHLRDGPPFQ Trigger: CTGAAAGGGTGGCCCATCACGAAGGTGGGGAATCCACTCCAGTACATGTGCATCACACACCTGGACCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | AGAGTCTGGAGCACCACCAGGTGGTGGAAGCCATTATaGTCGATGATGTGCAATCCGGTGTTTCTGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVWSTTRWWKPL*SMMCNPVFLRS Trigger: GGACCTCAGAAACACCGGATTGCACATCATCGACCATAATGGCTTCCACCACCTGGTGGTGCTCCAGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | TTGCATATCCAGGGGTTCCCACTTAGGTACAGAGTCTaGAGCACCACCAGGTGGTGGAAGCCATTATGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LHIQGFPLRYRV*STTRWWKPLWS Trigger: CGACCATAATGGCTTCCACCACCTGGTGGTGCTCCAGACTCTGTACCTAAGTGGGAACCCCTGGATATGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | GTACACGTGGCGTTCTGGGCATCTGGGTGGTCCATATaGGACACTAATAAGTGGATGGTGAAGTCCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VHVAFWASGWSI*DTNKWMVKSRK Trigger: CTTCCTGGACTTCACCATCCACTTATTAGTGTCCCATATGGACCACCCAGATGCCCAGAACGCCACGTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS TCA 72 bp | CTGGGTGGTCCATATGGGACACTAATAAGTGGATGGTaGAGTCCAGGAAGGAGCAGTTGCATATCCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGGPYGTLISGW*SPGRSSCISRG Trigger: ACCCCTGGATATGCAACTGCTCCTTCCTGGACTTCACCATCCACTTATTAGTGTCCCATATGGACCACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS GCA 72 bp | ACCACCAGGTGGTGGAAGCCATTATGGTCGATGATGTaGAATCCGGTGTTTCTGAGGTCCAGGTACCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TTRWWKPLWSMM*NPVFLRSRYLK Trigger: TTTGAGGTACCTGGACCTCAGAAACACCGGATTGCACATCATCGACCATAATGGCTTCCACCACCTGGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CAA 72 bp | AGTTCAGGGAACCGACGAATGGGGCCCAAGTGTGTGTaGCTTCGAAAAATCTGGTTGGCGAATCTACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSGNRRMGPKCV*LRKIWLANLLP Trigger: TGGGAGTAGATTCGCCAACCAGATTTTTCGAAGCAACACACACTTGGGCCCCATTCGTCGGTTCCCTGAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | TGGGCATCTGGGTGGTCCATATGGGACACTAATAAGTaGATGGTGAAGTCCAGGAAGGAGCAGTTGCATATC | + |
|
Preference number: 6 (lower is better) Translates to: WASGWSIWDTNK*MVKSRKEQLHI Trigger: GATATGCAACTGCTCCTTCCTGGACTTCACCATCCACTTATTAGTGTCCCATATGGACCACCCAGATGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | CGAATGGGGCCCAAGTGTGTGTTGCTTCGAAAAATCTaGTTGGCGAATCTACTCCCAGTTTCATCTTCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RMGPKCVLLRKI*LANLLPVSSSV Trigger: TACCGAAGATGAAACTGGGAGTAGATTCGCCAACCAGATTTTTCGAAGCAACACACACTTGGGCCCCATTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CAA 72 bp | TGCAGGCTACTTCTTGGTCTTGACACACACACTTGTTaGGACACTTGGACCCTGATACCAACCCCATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CRLLLGLDTHTC*DTWTLIPTPFQ Trigger: TTGGAATGGGGTTGGTATCAGGGTCCAAGTGTCCAAACAAGTGTGTGTGTCAAGACCAAGAAGTAGCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS TCA 72 bp | GTGTTGGCAAAGACGTATTTGTCAAGATACAACAGGTaGGGGTTGTGTGAAATGTTCAGCCGCACCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLAKTYLSRYNR*GLCEMFSRTRL Trigger: CAACCTGGTGCGGCTGAACATTTCACACAACCCTCACCTGTTGTATCTTGACAAATACGTCTTTGCCAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | TGGGGCCCAAGTGTGTGTTGCTTCGAAAAATCTGGTTaGCGAATCTACTCCCAGTTTCATCTTCGGTATCAT | + |
|
Preference number: 6 (lower is better) Translates to: WGPSVCCFEKSG*RIYSQFHLRYH Trigger: ATGATACCGAAGATGAAACTGGGAGTAGATTCGCCAACCAGATTTTTCGAAGCAACACACACTTGGGCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CAA 72 bp | ATGGGGCCCAAGTGTGTGTTGCTTCGAAAAATCTGGTaGGCGAATCTACTCCCAGTTTCATCTTCGGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: MGPKCVLLRKIW*ANLLPVSSSVS Trigger: TGATACCGAAGATGAAACTGGGAGTAGATTCGCCAACCAGATTTTTCGAAGCAACACACACTTGGGCCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CAA 90 bp | GCAAATCTATGCAGGCTACTTCTTGGTCTTGACACACACACTTGTTaGGACACTTGGACCCTGATACCAACCCCATTCCAAGAGAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ANLCRLLLGLDTHTC*DTWTLIPTPFQEKR Trigger: TCTTTTCTCTTGGAATGGGGTTGGTATCAGGGTCCAAGTGTCCAAACAAGTGTGTGTGTCAAGACCAAGAAGTAGCCTGCATAGATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CAA 90 bp | CTGAGGAATCCCAGCTGCAAAGCTGGTAAACTAGTGATTTTGTTATaGTTCAGGTATAGTCTCCGGGTGTTCAGAGGAATATCAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRNPSCKAGKLVILL*FRYSLRVFRGISAG Trigger: CCCAGCTGATATTCCTCTGAACACCCGGAGACTATACCTGAACAATAACAAAATCACTAGTTTACCAGCTTTGCAGCTGGGATTCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CCA 72 bp | CTTCTTGGTCTTGACACACACACTTGTTTGGACACTTaGACCCTGATACCAACCCCATTCCAAGAGAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLGLDTHTCLDT*TLIPTPFQEKR Trigger: TCTTTTCTCTTGGAATGGGGTTGGTATCAGGGTCCAAGTGTCCAAACAAGTGTGTGTGTCAAGACCAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CAA 90 bp | AGGTCACTGAGGAATCCCAGCTGCAAAGCTGGTAAACTAGTGATTTaGTTATTGTTCAGGTATAGTCTCCGGGTGTTCAGAGGAATATCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLRNPSCKAGKLVI*LLFRYSLRVFRGIS Trigger: TGATATTCCTCTGAACACCCGGAGACTATACCTGAACAATAACAAAATCACTAGTTTACCAGCTTTGCAGCTGGGATTCCTCAGTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||
| CDS CAA 72 bp | AGGAATCCCAGCTGCAAAGCTGGTAAACTAGTGATTTaGTTATTGTTCAGGTATAGTCTCCGGGTGTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RNPSCKAGKLVI*LLFRYSLRVFR Trigger: TCTGAACACCCGGAGACTATACCTGAACAATAACAAAATCACTAGTTTACCAGCTTTGCAGCTGGGATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036643.6 |
||