Pregenerated sensors for LRRC4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047085Ensembl transcript IDs: ENSMUST00000058667.15, ENSMUST00000127790.8, ENSMUST00000156093.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGATTGACGCAAACCTCCCTTCAGTATCAAAAGAGTCTGTGGGGTaGGGTGGGCCTGCCAGGGCCGCGAGTGGAGCTCGCTGTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: VIDANLPSVSKESVG*GGPARAASGARCWG Trigger: CCCCCAACAGCGAGCTCCACTCGCGGCCCTGGCAGGCCCACCCCACCCCACAGACTCTTTTGATACTGAAGGGAGGTTTGCGTCAATCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| 3UTR-3UTR CCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGCGGGGCCACCTCTCCTaGTCCCCAGGTCCTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GVAPWALVKLPVSCVLRVRGHLS*SPGPFP Trigger: TGGGAAAGGACCTGGGGACCAGGAGAGGTGGCCCCG...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCAGGCCGGCGGGCGCGTaGCAGCGTGCGCAGCATGTG | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVRPAGA*QRAQHV Trigger: CACATGCTGCGCACGCTGCCACGCGCCCGCCGGCCT...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCGCCGGAAGGGCCAGGTaGCTGTCCCCACCCACGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVAGRAR*LSPPTP Trigger: GGGCGTGGGTGGGGACAGCCACCTGGCCCTTCCGGC...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCCCAGCTCCCTCCGCGTaGAGATCACCCGGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVPAPSA*RSPGWP Trigger: AGGCCAGCCGGGTGATCTGCACGCGGAGGGAGCTGG...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCCGCCGTAGTGCGCCTTaGAGGCGGCCGCAACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVRRSAP*RRPQRS Trigger: ACTACGTTGCGGCCGCCTTCAAGGCGCACTACGGCG...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCGGCCCGTGGTGCTTGTaGAGCTGGTGCTGCTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVGPWCL*SWCCLR Trigger: GCGCAAGCAGCACCAGCTGCACAAGCACCACGGGCC...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCGACTGGGCAGCCCATTaGACGCTCCCACCTCGATCT | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVDWAAH*TLPPRS Trigger: AGATCGAGGTGGGAGCGTTCAATGGGCTGCCCAGTC...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCGCTCCTCCAGCGACTTaGGGTCGTCGAAGGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVAPPAT*GRRRRF Trigger: GAAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGC...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCCCGGGGCATAGCAGGTaGAGTGCGACTGGTCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVPGHSR*SATGLA Trigger: AGCTAGACCAGTCGCACTTCACCTGCTATGCCCCGG...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCTCCAGGTGCCGGAGGTaGTTGAATGTGTCCGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVSRCRR*LNVSVR Trigger: CCGCACGGACACATTCAAGCACCTCCGGCACCTGGA...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCGCAGCTGGTGCTGCTTaGGCAGCTTGTAGAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVAAGAA*AACRRP Trigger: TGGCCTTCTACAAGCTGCGCAAGCAGCACCAGCTGC...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCTCGATGGTGGCCACTTaGGCATGCATCAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVSMVAT*ACISHS Trigger: GCTGTGGCTGATGCATGCCCAAGTGGCCACCATCGA...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCCAATGCCAGGGGTTGTaGTTCAGGTGGACACGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVQCQGL*FRWTRS Trigger: GGAGCGTGTCCACCTGAACCACAACCCCTGGCATTG...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCTGGTGCTTGTGCAGCTaGTGCTGCTTGCGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVWCLCS*CCLRSL Trigger: CAAGCTGCGCAAGCAGCACCAGCTGCACAAGCACCA...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCTGCAGGATCTCCAGGTaGCGGAGGTGCTTGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVCRISR*RRCLNV Trigger: CACATTCAAGCACCTCCGGCACCTGGAGATCCTGCA...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCTTCGCACCAGGTTCTTaGTCAGCTGCAGGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVFAPGS*SAAGSP Trigger: TGGAGATCCTGCAGCTGAGCAAGAACCTGGTGCGAA...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCTGCGGATCACCTGGATaGTGTTCTCTTGCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GRGRGKAEGGATSPGPQVCGSPG*CSLAGS Trigger: TGAACCTGCAAGAGAACAGCATCCAGGTGATCCGCA...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGTCAGTACCTCGGGGCTaGTGGGCCTCCTCCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVSVPRG*WASSPG Trigger: GCCGGGGGAGGAGGCCCAGCAGCCCCGAGGTACTGA...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTCAATGTAGCGGCCCTTaGGGCCGGCGGGCGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFQCSGP*GRRARG Trigger: GCCACGCGCCCGCCGGCCTCAAGGGCCGCTACATTG...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGTACCTCGGGGCTGCTaGGCCTCCTCCCCCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFVPRGC*ASSPGC Trigger: GCAGCCGGGGGAGGAGGCCCAGCAGCCCCGAGGTAC...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGGTTCGTGGATGGAGTTaGGGCCGGGGCCTTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVVRGWS*GRGLWP Trigger: GGGCCAAAGGCCCCGGCCTCAACTCCATCCACGAAC...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGGCTGGCCTGGTTGCTaGAGGAGCAGGCGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFGWPGC*RSRRLG Trigger: GCCCAGCCGCCTGCTCCTGCAGCAACCAGGCCAGCC...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGCCTCCTCCCCCGGCTaGGTCTCCAGCGTCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFASSPG*VSSVST Trigger: CGTGGAGACGCTGGAGACGCAGCCGGGGGAGGAGGC...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGACACGCTCCAGGCGGTaGAGGGGCGTGAAAAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVTRSRR*RGVKRS Trigger: CGACCTTTTCACGCCCCTTCACCGCCTGGAGCGTGT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGGGGCGCGTGGCAGCGTaGGCAGCATGTGGTATTGCT | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVGRVAA*AACGIA Trigger: AGCAATACCACATGCTGCGCACGCTGCCACGCGCCC...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTCGCGTGGGCCCGTGGTaGTTGTGCAGCTGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFRVGPW*LCSWCC Trigger: GCAGCACCAGCTGCACAAGCACCACGGGCCCACGCG...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGTGCGCGTGGGCCCGTaGTGCTTGTGCAGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFVRVGP*CLCSWC Trigger: GCACCAGCTGCACAAGCACCACGGGCCCACGCGCAC...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGTCAGGTAGCGGGTGTTaGCAGGGATGCTGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVSGSGC*QGCWLA Trigger: TGCCAGCCAGCATCCCTGTCAACACCCGCTACCTGA...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTTGCCTGTGCGGCACTTaGGCTCAGCCGCCATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFCLCGT*AQPPCP Trigger: AGGGCATGGCGGCTGAGCTCAAGTGCCGCACAGGCA...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGAGCAAGAGAGCCCCGTaGGGCCAGGACATCCTACCA | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVSKRAP*GQDILP Trigger: TGGTAGGATGTCCTGGCCCCACGGGGCTCTCTTGCT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGACAGGGATGCTGGCTaGCACCTCGGCCAGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFDRDAG*HLGQLP Trigger: AGGGAGCTGGCCGAGGTGCCAGCCAGCATCCCTGTC...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGACTCAAAGGCCTGCGTaGGCACGGTTGTCAGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVTQRPA*ARLSAG Trigger: ACCGGCTGACAACCGTGCCCACGCAGGCCTTTGAGT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTCCACGGTCACCGTGGTaGAGTAGGTGTATCCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFPRSPW*SRCIRP Trigger: CGGGCGGATACACCTACTTCACCACGGTGACCGTGG...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGCCTTGGAGCCGCTCTTaGAGAGCAGAGGTTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVPWSRS*RAEVRG Trigger: TCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGG...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGCTCCAGGCGCACAAGTaGTGTGAGGTTGGGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVLQAHK*CEVGDV Trigger: GACATCCCCAACCTCACAGCACTTGTGCGCCTGGAG...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGGGCGTGAAAAGGTCGTaGGGCAGCGACATCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVGVKRS*GSDIRL Trigger: CAACCTGATGTCGCTGCCGCACGACCTTTTCACGCC...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTACCAGCCCTCAGGGGTaGGGAGAAGAGCCACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFTSPQG*GEEPQE Trigger: CTCCTGTGGCTCTTCTCCCCACCCCTGAGGGCTGGT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTTCTCCACAGTGCGCGTaGGCCCGTGGTGCTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFSPQCA*ARGACA Trigger: TGCACAAGCACCACGGGCCCACGCGCACTGTGGAGA...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGAAGAGCAGAGGTTCGTaGATGGAGTTGAGGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVKSRGS*MELRPG Trigger: CCCCGGCCTCAACTCCATCCACGAACCTCTGCTCTT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTCGTAGTGGTGGTGATTaGGGTGGTCTCGCTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFRSGGD*GGLAPA Trigger: CGCTGGAGCGAGACCACCTCAATCACCACCACTACG...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGTGGCCACTTGGGCATaGATCAGCCACAGCTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFVATWA*ISHSLR Trigger: GCGCAAGCTGTGGCTGATGCATGCCCAAGTGGCCAC...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGTACTGGCCCGTGTCCTaGACGGTGACATTGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVYWPVS*TVTLVK Trigger: CTTCACCAATGTCACCGTGCAGGACACGGGCCAGTA...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGCCGAGTTTGTCACCATaGACGTGTACTGGCCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVPSLSP*TCTGPC Trigger: ACACGGGCCAGTACACGTGCATGGTGACAAACTCGG...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGTCCGTGCGGATCACCTaGATGCTGTTCTCTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVSVRIT*MLFSCR Trigger: CCTGCAAGAGAACAGCATCCAGGTGATCCGCACGGA...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGCGTTTCGCTCGATGGTaGCCACTTGGGCATGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVRFARW*PLGHAS Trigger: TGATGCATGCCCAAGTGGCCACCATCGAGCGAAACG...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGAGCGTGCGCAGCATGTaGTATTGCTGGGCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVSVRSM*YCWALS Trigger: AGACAGTGCCCAGCAATACCACATGCTGCGCACGCT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTATTGAGGTCTGTGGGTaGCTCCACGATGACCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFIEVCG*LHDDRG Trigger: GCCCCGGTCATCGTGGAGCCACCCACAGACCTCAAT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTACCATGCACGTGTACTaGCCCGTGTCCTGCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFTMHVY*PVSCTV Trigger: CACCGTGCAGGACACGGGCCAGTACACGTGCATGGT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTTGCACATGCCCAGGTTaGGGTAGCGCAGGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFCTCPG*GSAGSP Trigger: TGGTGAACCTGCGCTACCTCAACCTGGGCATGTGCA...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTCCTTCAGCCACCAGCTaGGCCACAGCACATCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFPSATS*ATAHHS Trigger: ACTGTGATGTGCTGTGGCTCAGCTGGTGGCTGAAGG...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTAGGTTCTTGCTCAGCTaGAGGATCTCCAGGTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFRFLLS*RISRCR Trigger: CCGGCACCTGGAGATCCTGCAGCTGAGCAAGAACCT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTAGGTACTCAAAGGCCTaGGTGGGCACGGTTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFRYSKA*VGTVVS Trigger: GCTGACAACCGTGCCCACGCAGGCCTTTGAGTACCT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGCGCAGCATGTGGTATTaGTGGGCACTGTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVRSMWY*WALSPS Trigger: TGAAGGAGACAGTGCCCAGCAATACCACATGCTGCG...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGAGCATGTGGTATTGCTaGGCACTGTCTCCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVSMWYC*ALSPSA Trigger: GGCTGAAGGAGACAGTGCCCAGCAATACCACATGCT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR TCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGGCGCACAAGTGCTGTaGGGTTGGGGATGTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFGAQVL*GWGCPL Trigger: TAAAGGACATCCCCAACCTCACAGCACTTGTGCGCC...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CCA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTACAGCTCCCGGAGCTTaGACAGGTACTCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HCRSCPLGSGEVACLLCFTAPGA*TGTQRP Trigger: AGGCCTTTGAGTACCTGTCCAAGCTCCGGGAGCTGT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGACATCACAGTTACAATaGCAGGGGTTGTGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVAPWALVKLPVSCVLRVTSQLQ*QGLWFR Trigger: CCTGAACCACAACCCCTGGCATTGTAACTGTGATGT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CCA 90 bp | AAGCCTTCTCCGTGGGCCGCGAGGAGCGCGGGGCCGGTGCCGTGGTaGACGCCGAGGCCGGGGCTGCAGCATCAGGCCGGCCGCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KPSPWAARSAGPVPW*TPRPGLQHQAGRRP Trigger: GGGGCGGCGGCCGGCCTGATGCTGCAGCCCCGGCCTCGGCGTCCACCACGGCACCGGCCCCGCGCTCCTCGCGGCCCACGGAGAAGGCTT 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCGGTTCGTGGATGGAGTaGAGGCCGGGGCCTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRGKAEGGATSPGPQVGSWME*RPGPLA Trigger: GGCCAAAGGCCCCGGCCTCAACTCCATCCACGAACC...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCCCTGCGTGGGCACGGTaGTCAGCCGGTTGTCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRGKAEGGATSPGPQVPAWAR*SAGCRR Trigger: TCTTCGACAACCGGCTGACAACCGTGCCCACGCAGG...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCATGCCCTCGGTGACATaGAGGTCTGTGGGTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRGKAEGGATSPGPQVMPSVT*RSVGGS Trigger: GGAGCCACCCACAGACCTCAATGTCACCGAGGGCAT...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCAGCTCCTCCAGCGACTaGAGGTCGTCGAAGGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRGRGKAEGGATSPGPQVSSSSD*RSSKAF Trigger: AAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGCT...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCTCCTTGGAGCCGCTCTaGAAGAGCAGAGGTTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGRGKAEGGATSPGPQVSLEPL*KSRGSW Trigger: CCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGA...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCAGCGACATCAGGTTGTaGTGGGACAGGTTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRGKAEGGATSPGPQVSDIRL*WDRFSS Trigger: GGAGCTGAACCTGTCCCACAACAACCTGATGTCGCT...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCGTGACATTGGTGAAGTaGAGTGTGCCATCGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRGKAEGGATSPGPQVVTLVK*SVPSCS Trigger: GCTGCACGATGGCACACTCAACTTCACCAATGTCAC...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACGCGGCAAGGCGGAGGGCGGGGCCACCTCTCCTGGTCCCCAGGTCTCCTGCACGGTGACATaGGTGAAGTTGAGTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRGKAEGGATSPGPQVSCTVT*VKLSVP Trigger: TGGCACACTCAACTTCACCAATGTCACCGTGCAGGA...GACCTGGGGACCAGGAGAGGTGGCCCCGCCCTCCGCCTTGCCGCGTCCTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CCA 90 bp | GTTCTCTTGCAGGTTCAGGTAGCGGGTGTTGACAGGGATGCTGGCTaGCACCTCGGCCAGCTCCCTCCGCGTGCAGATCACCCGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLQVQVAGVDRDAG*HLGQLPPRADHPAG Trigger: GCCAGCCGGGTGATCTGCACGCGGAGGGAGCTGGCCGAGGTGCCAGCCAGCATCCCTGTCAACACCCGCTACCTGAACCTGCAAGAGAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS CCA 90 bp | TCTTGCACGTTCTCCTTGGAGCCGCTCTTGAAGAGCAGAGGTTCGTaGATGGAGTTGAGGCCGGGGCCTTTGGCCCCGCACCCGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SCTFSLEPLLKSRGS*MELRPGPLAPHPPP Trigger: GGGAGGCGGGTGCGGGGCCAAAGGCCCCGGCCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS TCA 90 bp | GGATCACCTGGATGCTGTTCTCTTGCAGGTTCAGGTAGCGGGTGTTaGCAGGGATGCTGGCTGGCACCTCGGCCAGCTCCCTCCGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPGCCSLAGSGSGC*QGCWLAPRPAPSAC Trigger: GCACGCGGAGGGAGCTGGCCGAGGTGCCAGCCAGCATCCCTGTCAACACCCGCTACCTGAACCTGCAAGAGAACAGCATCCAGGTGATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGACCCGGCTGGCCTGGTaGCTGCAGGAGCAGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVTRLAW*LQEQAA Trigger: AGCCGCCTGCTCCTGCAGCAACCAGGCCAGCCGGGT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTTTGAGGCCGGGGCCTTaGGCCCCGCACCCGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HCRSCPLGSGEVACLLCFLRPGP*APHPPP Trigger: GGGAGGCGGGTGCGGGGCCAAAGGCCCCGGCCTCAA...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS GCA 90 bp | TTGAGGTCGTCGAAGGCGTTTCGCTCGATGGTGGCCACTTGGGCATaGATCAGCCACAGCTTGCGCAGGCTGGTGAGGCCCTGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSSKAFRSMVATWA*ISHSLRRLVRPWKE Trigger: CTCCTTCCAGGGCCTCACCAGCCTGCGCAAGCTGTGGCTGATGCATGCCCAAGTGGCCACCATCGAGCGAAACGCCTTCGACGACCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGGTGGGCCCGTGGTGCTaGTGCAGCTGGTGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVVGPWC*CSWCCL Trigger: CAAGCAGCACCAGCTGCACAAGCACCACGGGCCCAC...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGTGCCTGTGCGGCACTaGAGCTCAGCCGCCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HCRSCPLGSGEVACLLCFVPVRH*SSAAMP Trigger: GGGCATGGCGGCTGAGCTCAAGTGCCGCACAGGCAC...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS GCA 90 bp | TTGAACGCTCCCACCTCGATCTTTCGCACCAGGTTCTTGCTCAGCTaGAGGATCTCCAGGTGCCGGAGGTGCTTGAATGTGTCCGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LNAPTSIFRTRFLLS*RISRCRRCLNVSVR Trigger: CCGCACGGACACATTCAAGCACCTCCGGCACCTGGAGATCCTGCAGCTGAGCAAGAACCTGGTGCGAAAGATCGAGGTGGGAGCGTTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGAGACTGGGCAGCCCATaGAACGCTCCCACCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVRLGSP*NAPTSI Trigger: GATCGAGGTGGGAGCGTTCAATGGGCTGCCCAGTCT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGCACAGCTCCCGGAGCTaGGACAGGTACTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVHSSRS*DRYSKA Trigger: GGCCTTTGAGTACCTGTCCAAGCTCCGGGAGCTGTG...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGCTCGATGGTGGCCACTaGGGCATGCATCAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVLDGGH*GMHQPQ Trigger: CTGTGGCTGATGCATGCCCAAGTGGCCACCATCGAG...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGGGCAGCGACATCAGGTaGTTGTGGGACAGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVGSDIR*LWDRFS Trigger: GCTGAACCTGTCCCACAACAACCTGATGTCGCTGCC...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS GCA 90 bp | TTGCCAGCCGAGTTTGTCACCATGCACGTGTACTGGCCCGTGTCCTaGACGGTGACATTGGTGAAGTTGAGTGTGCCATCGTGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LPAEFVTMHVYWPVS*TVTLVKLSVPSCST Trigger: AGTGCTGCACGATGGCACACTCAACTTCACCAATGTCACCGTGCAGGACACGGGCCAGTACACGTGCATGGTGACAAACTCGGCTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CCA 90 bp | GAGGCAGTAGTGTTGCCAGCCGAGTTTGTCACCATGCACGTGTACTaGCCCGTGTCCTGCACGGTGACATTGGTGAAGTTGAGTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EAVVLPAEFVTMHVY*PVSCTVTLVKLSVP Trigger: TGGCACACTCAACTTCACCAATGTCACCGTGCAGGACACGGGCCAGTACACGTGCATGGTGACAAACTCGGCTGGCAACACTACTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGTTTCGCACCAGGTTCTaGCTCAGCTGCAGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVFRTRF*LSCRIS Trigger: GGAGATCCTGCAGCTGAGCAAGAACCTGGTGCGAAA...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGTTACAATGCCAGGGGTaGTGGTTCAGGTGGACACGC | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVLQCQG*WFRWTR Trigger: GCGTGTCCACCTGAACCACAACCCCTGGCATTGTAA...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
||
| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGTCTTGCACGTTCTCCTaGGAGCCGCTCTTGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVSCTFS*EPLLKS Trigger: GCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGA...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
||
| CDS TCA 90 bp | CTGCACGGTGACATTGGTGAAGTTGAGTGTGCCATCGTGCAGCACTaGAATGCGCACACGATAGGAACCGTGCGTCATGAGCGTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LHGDIGEVECAIVQH*NAHTIGTVRHERAV Trigger: AACGGCACGCTCATGACGCACGGTTCCTATCGTGTGCGCATTTCAGTGCTGCACGATGGCACACTCAACTTCACCAATGTCACCGTGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
||
| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGAAGAGTTCCAGTGTGTaGAGACTGGGCAGCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVKSSSV*RLGSPL Trigger: CAATGGGCTGCCCAGTCTCAACACACTGGAACTCTT...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
||
| CDS-3UTR CAA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTATGCTTTCGATGGGGTaGTTGCGCAGCCACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HCRSCPLGSGEVACLLCFMLSMG*LRSHSS Trigger: GGAGCTGTGGCTGCGCAACAACCCCATCGAAAGCAT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
||
| CDS-3UTR CAA 90 bp | GGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTGAGGGTGTGTTGCCAGCCGAGTTaGTCACCATGCACGTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GVAPWALVKLPVSCVLRVCCQPS*SPCTCT Trigger: AGTACACGTGCATGGTGACAAACTCGGCTGGCAACA...CACCCTCAAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
||
| CDS-3UTR CAA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTAGCTCGTCCTCCACGTaGATGATCTCCACAGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: HCRSCPLGSGEVACLLCFSSSST*MISTVR Trigger: GCGCACTGTGGAGATCATCAACGTGGAGGACGAGCT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTCTGGATGCTGTTCTCTaGCAGGTTCAGGTAGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: HCRSCPLGSGEVACLLCFLDAVL*QVQVAG Trigger: ACCCGCTACCTGAACCTGCAAGAGAACAGCATCCAG...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTACAAGTGCTGTGAGGTaGGGGATGTCCTTTAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: HCRSCPLGSGEVACLLCFTSAVR*GMSFRL Trigger: CAACCTAAAGGACATCCCCAACCTCACAGCACTTGT...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS-3UTR CAA 90 bp | CATTGTCGGAGTTGCCCCCTGGGCTCTGGTGAAGTTGCCTGTCTCTTGTGTTTTTTAGATTTGTGTCTCTaGCACGTTCTCCTTGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: HCRSCPLGSGEVACLLCFLDLCL*HVLLGA Trigger: GGCTCCAAGGAGAACGTGCAAGAGACACAAATCTAA...AAAACACAAGAGACAGGCAACTTCACCAGAGCCCAGGGGGCAACTCCGACAATG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS TCA 72 bp | GCAGGAGGTGGCTGGCGGGGAGCCTCCTCCAGCGGCTaGGGTCACGGCCACACCGCCCCCACCAGCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: AGGGWRGASSSG*GHGHTAPTSPQ Trigger: CTGAGGGCTGGTGGGGGCGGTGTGGCCGTGACCTCAGCCGCTGGAGGAGGCTCCCCGCCAGCCACCTCCTGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS GCA 72 bp | GCTCCCTCCGCGTGCAGATCACCCGGCTGGCCTGGTTaGTGCAGGAGCAGGCGGCTGGGCAGGAGGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: APSACRSPGWPG*CRSRRLGRRWL Trigger: CAGCCACCTCCTGCCCAGCCGCCTGCTCCTGCAGCAACCAGGCCAGCCGGGTGATCTGCACGCGGAGGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS TCA 72 bp | CCGGCTGCGTCTCCAGCGTCTCCACGGTCACCGTGGTaGAGTAGGTGTATCCGCCCGCGCCCCCTGCACCGC | + |
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Preference number: 6 (lower is better) Translates to: PAASPASPRSPW*SRCIRPRPLHR Trigger: GCGGTGCAGGGGGCGCGGGCGGATACACCTACTTCACCACGGTGACCGTGGAGACGCTGGAGACGCAGCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 90 bp | GCAGCCACCGACACAGCGGAGGCGGCGGGCAGCTCGTCCTCCACGTaGATGATCTCCACAGTGCGCGTGGGCCCGTGGTGCTTGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AATDTAEAAGSSSST*MISTVRVGPWCLCS Trigger: GCTGCACAAGCACCACGGGCCCACGCGCACTGTGGAGATCATCAACGTGGAGGACGAGCTGCCCGCCGCCTCCGCTGTGTCGGTGGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS TCA 72 bp | AGTGCGACTGGTCTAGCTCGCCAATGTAGCGGCCCTTaGGGCCGGCGGGCGCGTGGCAGCGTGCGCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: SATGLARQCSGP*GRRARGSVRSM Trigger: CATGCTGCGCACGCTGCCACGCGCCCGCCGGCCTCAAGGGCCGCTACATTGGCGAGCTAGACCAGTCGCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 72 bp | GACACAGCGGAGGCGGCGGGCAGCTCGTCCTCCACGTaGATGATCTCCACAGTGCGCGTGGGCCCGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: DTAEAAGSSSST*MISTVRVGPWC Trigger: GCACCACGGGCCCACGCGCACTGTGGAGATCATCAACGTGGAGGACGAGCTGCCCGCCGCCTCCGCTGTGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 72 bp | CCGGCGGGCGCGTGGCAGCGTGCGCAGCATGTGGTATaGCTGGGCACTGTCTCCTTCAGCCACCAGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: PAGAWQRAQHVV*LGTVSFSHQLS Trigger: GCTCAGCTGGTGGCTGAAGGAGACAGTGCCCAGCAATACCACATGCTGCGCACGCTGCCACGCGCCCGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 72 bp | GAGCCGCTCTTGAAGAGCAGAGGTTCGTGGATGGAGTaGAGGCCGGGGCCTTTGGCCCCGCACCCGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: EPLLKSRGSWME*RPGPLAPHPPP Trigger: GGGAGGCGGGTGCGGGGCCAAAGGCCCCGGCCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 90 bp | CCCTTGAGGCCGGCGGGCGCGTGGCAGCGTGCGCAGCATGTGGTATaGCTGGGCACTGTCTCCTTCAGCCACCAGCTGAGCCACAGCACA | + |
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Preference number: 6 (lower is better) Translates to: PLRPAGAWQRAQHVV*LGTVSFSHQLSHST Trigger: TGTGCTGTGGCTCAGCTGGTGGCTGAAGGAGACAGTGCCCAGCAATACCACATGCTGCGCACGCTGCCACGCGCCCGCCGGCCTCAAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 90 bp | TTCTCCTTGGAGCCGCTCTTGAAGAGCAGAGGTTCGTGGATGGAGTaGAGGCCGGGGCCTTTGGCCCCGCACCCGCCTCCCGGGTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: FSLEPLLKSRGSWME*RPGPLAPHPPPGLP Trigger: CGGCAACCCGGGAGGCGGGTGCGGGGCCAAAGGCCCCGGCCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CCA 72 bp | CAGGTTCAGGTAGCGGGTGTTGACAGGGATGCTGGCTaGCACCTCGGCCAGCTCCCTCCGCGTGCAGATCAC | + |
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Preference number: 6 (lower is better) Translates to: QVQVAGVDRDAG*HLGQLPPRADH Trigger: GTGATCTGCACGCGGAGGGAGCTGGCCGAGGTGCCAGCCAGCATCCCTGTCAACACCCGCTACCTGAACCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS GCA 72 bp | TCGAAGGCGTTTCGCTCGATGGTGGCCACTTGGGCATaGATCAGCCACAGCTTGCGCAGGCTGGTGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SKAFRSMVATWA*ISHSLRRLVRP Trigger: GGGCCTCACCAGCCTGCGCAAGCTGTGGCTGATGCATGCCCAAGTGGCCACCATCGAGCGAAACGCCTTCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 90 bp | ACGGGGTCCACGGCCGACACGTTAAGCGTGGCCGAGGCAGTAGTGTaGCCAGCCGAGTTTGTCACCATGCACGTGTACTGGCCCGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TGSTADTLSVAEAVV*PAEFVTMHVYWPVS Trigger: GGACACGGGCCAGTACACGTGCATGGTGACAAACTCGGCTGGCAACACTACTGCCTCGGCCACGCTTAACGTGTCGGCCGTGGACCCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS TCA 72 bp | GGATGCTGTTCTCTTGCAGGTTCAGGTAGCGGGTGTTaGCAGGGATGCTGGCTGGCACCTCGGCCAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GCCSLAGSGSGC*QGCWLAPRPAP Trigger: GGGAGCTGGCCGAGGTGCCAGCCAGCATCCCTGTCAACACCCGCTACCTGAACCTGCAAGAGAACAGCATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS CCA 72 bp | AGGTCGTCGAAGGCGTTTCGCTCGATGGTGGCCACTTaGGCATGCATCAGCCACAGCTTGCGCAGGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RSSKAFRSMVAT*ACISHSLRRLV Trigger: CACCAGCCTGCGCAAGCTGTGGCTGATGCATGCCCAAGTGGCCACCATCGAGCGAAACGCCTTCGACGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CCA 72 bp | TTCTCCTTGGAGCCGCTCTTGAAGAGCAGAGGTTCGTaGATGGAGTTGAGGCCGGGGCCTTTGGCCCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: FSLEPLLKSRGS*MELRPGPLAPH Trigger: GTGCGGGGCCAAAGGCCCCGGCCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 72 bp | GAGGTCGTCGAAGGCGTTTCGCTCGATGGTGGCCACTaGGGCATGCATCAGCCACAGCTTGCGCAGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: EVVEGVSLDGGH*GMHQPQLAQAG Trigger: ACCAGCCTGCGCAAGCTGTGGCTGATGCATGCCCAAGTGGCCACCATCGAGCGAAACGCCTTCGACGACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS TCA 72 bp | GGTTCAGGTGGACACGCTCCAGGCGGTGAAGGGGCGTaGAAAGGTCGTGCGGCAGCGACATCAGGTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GSGGHAPGGEGA*KGRAAATSGCC Trigger: ACAACAACCTGATGTCGCTGCCGCACGACCTTTTCACGCCCCTTCACCGCCTGGAGCGTGTCCACCTGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 72 bp | ACGGCCGACACGTTAAGCGTGGCCGAGGCAGTAGTGTaGCCAGCCGAGTTTGTCACCATGCACGTGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: TADTLSVAEAVV*PAEFVTMHVYW Trigger: CCAGTACACGTGCATGGTGACAAACTCGGCTGGCAACACTACTGCCTCGGCCACGCTTAACGTGTCGGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS GCA 72 bp | CCCACCTCGATCTTTCGCACCAGGTTCTTGCTCAGCTaGAGGATCTCCAGGTGCCGGAGGTGCTTGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: PTSIFRTRFLLS*RISRCRRCLNV Trigger: CACATTCAAGCACCTCCGGCACCTGGAGATCCTGCAGCTGAGCAAGAACCTGGTGCGAAAGATCGAGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS GCA 72 bp | GAGTTTGTCACCATGCACGTGTACTGGCCCGTGTCCTaGACGGTGACATTGGTGAAGTTGAGTGTGCCATCG | + |
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Preference number: 6 (lower is better) Translates to: EFVTMHVYWPVS*TVTLVKLSVPS Trigger: CGATGGCACACTCAACTTCACCAATGTCACCGTGCAGGACACGGGCCAGTACACGTGCATGGTGACAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 72 bp | GAATGTGTCCGTGCGGATCACCTGGATGCTGTTCTCTaGCAGGTTCAGGTAGCGGGTGTTGACAGGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: ECVRADHLDAVL*QVQVAGVDRDA Trigger: AGCATCCCTGTCAACACCCGCTACCTGAACCTGCAAGAGAACAGCATCCAGGTGATCCGCACGGACACATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058667.15 ENSMUST00000127790.8 ENSMUST00000156093.2 |
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| CDS CAA 90 bp | TTTGTCACCATGCACGTGTACTGGCCCGTGTCCTGCACGGTGACATaGGTGAAGTTGAGTGTGCCATCGTGCAGCACTGAAATGCGCACA | + |
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Preference number: 6 (lower is better) Translates to: FVTMHVYWPVSCTVT*VKLSVPSCSTEMRT Trigger: TGTGCGCATTTCAGTGCTGCACGATGGCACACTCAACTTCACCAATGTCACCGTGCAGGACACGGGCCAGTACACGTGCATGGTGACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS CAA 72 bp | ATTTGTGTCTCTTGCACGTTCTCCTTGGAGCCGCTCTaGAAGAGCAGAGGTTCGTGGATGGAGTTGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: ICVSCTFSLEPL*KSRGSWMELRP Trigger: CGGCCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGAGACACAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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| CDS TCA 72 bp | GACATTGGTGAAGTTGAGTGTGCCATCGTGCAGCACTaGAATGCGCACACGATAGGAACCGTGCGTCATGAG | + |
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Preference number: 6 (lower is better) Translates to: DIGEVECAIVQH*NAHTIGTVRHE Trigger: CTCATGACGCACGGTTCCTATCGTGTGCGCATTTCAGTGCTGCACGATGGCACACTCAACTTCACCAATGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058667.15 |
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