Pregenerated sensors for LRRC40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063052Ensembl transcript IDs: ENSMUST00000072080.10, ENSMUST00000123028.2, ENSMUST00000131518.8, ENSMUST00000150525.8, ENSMUST00000156597.8, ENSMUST00000200540.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGACTGCAGCAGGGCCATTTCCTCAGGGACAGACCGCAGCTTATTaGCCCTTAGGTCCAGGACAAGGATGGCCTGCAGGTGCTGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: KTAAGPFPQGQTAAY*PLGPGQGWPAGAED Trigger: ATCTTCAGCACCTGCAGGCCATCCTTGTCCTGGACCTAAGGGGCAATAAGCTGCGGTCTGTCCCTGAGGAAATGGCCCTGCTGCAGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR CCA 90 bp | CAGGGACAGACCGCAGCTTATTGCCCCTTAGGTCCAGGACAAGGATaGCCTGCAGGTGCTGAAGATGCTCTGCCCCTAACTTCTCTATCT | + |
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Preference number: 1 (lower is better) Translates to: QGQTAAYCPLGPGQG*PAGAEDALPLTSLS Trigger: AGATAGAGAAGTTAGGGGCAGAGCATCTTCAGCACCTGCAGGCCATCCTTGTCCTGGACCTAAGGGGCAATAAGCTGCGGTCTGTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR TCA 90 bp | ATAGGTTCTCTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTaGCACATGCTTCTACTGAGCTGGCTACTCTCGACTCAATCACAT | + |
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Preference number: 1 (lower is better) Translates to: IGSLPPPSARRLTLS*HMLLLSWLLSTQSH Trigger: ATGTGATTGAGTCGAGAGTAGCCAGCTCAGTAGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAGAGAACCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072080.10 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR GCA 90 bp | CTCAGGCAGGGATTCGATCTCTCAAATACTCCAGCACAGCAGCTGTaGCTTTCATTAATATGGCCGCTCGAGGAACTCGGAATGGATTTC | + |
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Preference number: 1 (lower is better) Translates to: LRQGFDLSNTPAQQL*LSLIWPLEELGMDF Trigger: GAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGCTGCTGTGCTGGAGTATTTGAGAGATCGAATCCCTGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR GCA 90 bp | CACGCAATTTATTCCTCCGCAAATAAAGCAATTCCAGTGATTCCATaGTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGCATCAC | + |
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Preference number: 1 (lower is better) Translates to: HAIYSSANKAIPVIP*YPHQEAQSPGDWHH Trigger: GTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCACTGGAATTGCTTTATTTGCGGAGGAATAAATTGCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| 3UTR CCA 90 bp | GATCTCTCAAATACTCCAGCACAGCAGCTGTGCCTTTCATTAATATaGCCGCTCGAGGAACTCGGAATGGATTTCCATCTAGCAGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: DLSNTPAQQLCLSLI*PLEELGMDFHLAVV Trigger: CACTACTGCTAGATGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGCTGCTGTGCTGGAGTATTTGAGAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR GCA 90 bp | GCAAGACGATTGCTTGAAAGATCTAAATCTTCTAAGCAGGAAAGATaGTCAAATCCCTCGGGGATGCAAGTCAGCTCATTGTGCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: ARRLLERSKSSKQER*SNPSGMQVSSLCWR Trigger: CCTCCAGCACAATGAGCTGACTTGCATCCCCGAGGGATTTGAGCATCTTTCCTGCTTAGAAGATTTAGATCTTTCAAGCAATCGTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR TCA 90 bp | TGCTTATTTCTGCTGGCAAATTCTTCAGCTGGTTACTGGAAAGATTaGGTCGCAACAGACTGGACAGCAAAGCAAAATCAGCAGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: CLFLLANSSAGYWKD*VATDWTAKQNQQAQ Trigger: CTGTGCCTGCTGATTTTGCTTTGCTGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCAGCTGAAGAATTTGCCAGCAGAAATAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR TCA 90 bp | TATCACTATAATCTAGCAGCTTTAGTGTGGCTATGGCATGGATATTaGCTCTGGCTTCACTTGGTAGTGTCATGGCAGTCTCAGGAACAG | + |
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Preference number: 1 (lower is better) Translates to: YHYNLAALVWLWHGY*LWLHLVVSWQSQEQ Trigger: CTGTTCCTGAGACTGCCATGACACTACCAAGTGAAGCCAGAGTCAATATCCATGCCATAGCCACACTAAAGCTGCTAGATTATAGTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR TCA 90 bp | CTGTCCATCCTTTGCTGTCTATGTGGACATTCTGATGTGTGTCAGTaGGCTGAATTCTACACGCTGTATATATTGCATGCATTTCACTGC | + |
|
Preference number: 1 (lower is better) Translates to: LSILCCLCGHSDVCQ*AEFYTLYILHAFHC Trigger: GCAGTGAAATGCATGCAATATATACAGCGTGTAGAATTCAGCTCACTGACACACATCAGAATGTCCACATAGACAGCAAAGGATGGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR TCA 90 bp | ACCATTTCCTTCAGCTCAACAATCCTTTGTGGAATCTCGCACAGCTaGTTTTTGCTGAAGTTGATGGAAGTGATGAGGGTCGTTTTTGTG | + |
|
Preference number: 1 (lower is better) Translates to: TISFSSTILCGISHS*FLLKLMEVMRVVFV Trigger: CACAAAAACGACCCTCATCACTTCCATCAACTTCAGCAAAAATCAGCTGTGCGAGATTCCACAAAGGATTGTTGAGCTGAAGGAAATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR CCA 90 bp | GTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTaGCATCACAATCCAAGTGCTTTAATCTTTTCATTCTGCTTATTT | + |
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Preference number: 1 (lower is better) Translates to: VIPCYPHQEAQSPGD*HHNPSALIFSFCLF Trigger: AAATAAGCAGAATGAAAAGATTAAAGCACTTGGATTGTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| 3UTR GCA 90 bp | GACTGGACAGCAAAGCAAAATCAGCAGGCACAGTTGCAAGACGATTaGTTGAAAGATCTAAATCTTCTAAGCAGGAAAGATGCTCAAATC | + |
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Preference number: 1 (lower is better) Translates to: DWTAKQNQQAQLQDD*LKDLNLLSRKDAQI Trigger: GATTTGAGCATCTTTCCTGCTTAGAAGATTTAGATCTTTCAAGCAATCGTCTTGCAACTGTGCCTGCTGATTTTGCTTTGCTGTCCAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR GCA 90 bp | ACATCAGGAGGCACAGTCTCCAGGAGATTGGCATCACAATCCAAGTaGTTTAATCTTTTCATTCTGCTTATTTCTGCTGGCAAATTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: TSGGTVSRRLASQSK*FNLFILLISAGKFF Trigger: GAAGAATTTGCCAGCAGAAATAAGCAGAATGAAAAGATTAAAGCACTTGGATTGTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| 3UTR CCA 90 bp | CTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTaGTGTATAGCAGAGCCATTTTTAGGTTCTGTTGTACTCAATTTT | + |
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Preference number: 1 (lower is better) Translates to: LEASADALCTDNSAV*CIAEPFLGSVVLNF Trigger: AAAATTGAGTACAACAGAACCTAAAAATGGCTCTGCTATACACCACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR CCA 90 bp | GAGGTTGATATCCAACACCATTTCCTTCAGCTCAACAATCCTTTGTaGAATCTCGCACAGCTGATTTTTGCTGAAGTTGATGGAAGTGAT | + |
|
Preference number: 1 (lower is better) Translates to: EVDIQHHFLQLNNPL*NLAQLIFAEVDGSD Trigger: ATCACTTCCATCAACTTCAGCAAAAATCAGCTGTGCGAGATTCCACAAAGGATTGTTGAGCTGAAGGAAATGGTGTTGGATATCAACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR TCA 90 bp | GCTTCACTTGGTAGTGTCATGGCAGTCTCAGGAACAGAATCATTTTaGTTGGTTCTATCATCTTTGATCTTGCTGCGCAGGTATTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: ASLGSVMAVSGTESF*LVLSSLILLRRYFR Trigger: TCTAAAATACCTGCGCAGCAAGATCAAAGATGATAGAACCAATCAAAATGATTCTGTTCCTGAGACTGCCATGACACTACCAAGTGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR TCA 90 bp | CGAATGGTTCTTAGAGGATTTCCTTCTAGTGCCAGGAATTTCAAATaGAGATTTCCCAATGAGCAGGGCAGACTACTAATATCATTGTTG | + |
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Preference number: 1 (lower is better) Translates to: RMVLRGFPSSARNFK*RFPNEQGRLLISLL Trigger: CAACAATGATATTAGTAGTCTGCCCTGCTCATTGGGAAATCTTCATTTGAAATTCCTGGCACTAGAAGGAAATCCTCTAAGAACCATTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR GCA 90 bp | CCAGGAGATTGGCATCACAATCCAAGTGCTTTAATCTTTTCATTCTaGTTATTTCTGCTGGCAAATTCTTCAGCTGGTTACTGGAAAGAT | + |
|
Preference number: 1 (lower is better) Translates to: PGDWHHNPSALIFSF*LFLLANSSAGYWKD Trigger: ATCTTTCCAGTAACCAGCTGAAGAATTTGCCAGCAGAAATAAGCAGAATGAAAAGATTAAAGCACTTGGATTGTGATGCCAATCTCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCAAGCCTTTCCAAAGACTGCAGCAGGGCCATTTCCTCAGGGACAGACCGCACAAGTCAGCTCATTGTaGTGGAGGTGCAGCGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GQAFPKTAAGPFPQGQTAQVSSL*WRCSVL Trigger: GAGGACGCTGCACCTCCAGCACAATGAGCTGACTTG...TGCGGTCTGTCCCTGAGGAAATGGCCCTGCTGCAGTCTTTGGAAAGGCTTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR CCA 90 bp | GATCAACAACCTCAACCGCCTATAGGTTCTCTACCTCCACCCTCCGCACGCAGGCTGTCTAGTGACACCTaGACACTGGAGGCTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: DQQPQPPIGSLPPPSARRLSSDT*TLEAGS Trigger: AGAGCCAGCCTCCAGTGTCCAGGTGTCACTAGACAG...CCTGCGTGCGGAGGGTGGAGGTAGAGAACCTATAGGCGGTTGAGGTTGTTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072080.10 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR CCA 90 bp | AGATGCTCAAATCCCTCGGGGATGCAAGTCAGCTCATTGTGCTGGAGGTGCAGCGTGACACCTGGACACTaGAGGCTGGCTCTGTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: RCSNPSGMQVSSLCWRCSVTPGH*RLALSY Trigger: ATAGGACAGAGCCAGCCTCCAGTGTCCAGGTGTCAC...GCTGCACCTCCAGCACAATGAGCTGACTTGCATCCCCGAGGGATTTGAGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR GCA 90 bp | GTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGCATCACCAAGTCAGCTCATTGTaGTGGAGGTGCAGCGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VIPCYPHQEAQSPGDWHHQVSSL*WRCSVL Trigger: GAGGACGCTGCACCTCCAGCACAATGAGCTGACTTG...GTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGTAGCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTGTGACACCTGGACACTaGAGGCTGGCTCTGTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: GVAWKHLQMRFVQIIALCVTPGH*RLALSY Trigger: ATAGGACAGAGCCAGCCTCCAGTGTCCAGGTGTCAC...ACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGCTACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCTAAGATCAACAACCTCAACCGCCTATAGGTTCTCTACCTCCACCCTCCGCTGTATACAAACTGGGTaGGAGGGGCAGCAAACACCT | + |
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Preference number: 2 (lower is better) Translates to: FLRSTTSTAYRFSTSTLRCIQTG*EGQQTP Trigger: AGGTGTTTGCTGCCCCTCCCACCCAGTTTGTATACA...GCGGAGGGTGGAGGTAGAGAACCTATAGGCGGTTGAGGTTGTTGATCTTAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGCCTTTCATTAATATGGCCGCTCGAGGAACTCGGAATGGATTTCCATCTGGTCCAGGACAAGGATaGCCTGCAGGTGCTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: AVPFINMAARGTRNGFPSGPGQG*PAGAED Trigger: ATCTTCAGCACCTGCAGGCCATCCTTGTCCTGGACC...AGATGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGGAACTCGGAATGGATTTCCATCTAGCAGTAGTGTCCGTAGCTGCACACAGATTCCAGTGATTCCATaGTACCCACATCAGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RGTRNGFPSSSSVRSCTQIPVIP*YPHQEA Trigger: TGCCTCCTGATGTGGGTAGCATGGAATCACTGGAAT...CTGTGTGCAGCTACGGACACTACTGCTAGATGGAAATCCATTCCGAGTTCCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR CCA 90 bp | ACATCAGGAGGCACAGTCTCCAGGAGATTGGCATCACAATCCAAGTGCTTTAATCTGTCTAGTGACACCTaGACACTGGAGGCTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TSGGTVSRRLASQSKCFNLSSDT*TLEAGS Trigger: AGAGCCAGCCTCCAGTGTCCAGGTGTCACTAGACAG...ATTAAAGCACTTGGATTGTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCCAGTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGGTTACTGGAAAGATTaGGTCGCAACAGACTGGACA | + |
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Preference number: 2 (lower is better) Translates to: NSSDSMLPTSGGTVSRRLGYWKD*VATDWT Trigger: TGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACC...CAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCACTGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCCACAGAGCCAACCTGATTGTTACTGATCAGAACCGCTTCCAGTGTGGACTATGGCATGGATATTaGCTCTGGCTTCACTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: RVHRANLIVTDQNRFQCGLWHGY*LWLHLV Trigger: TACCAAGTGAAGCCAGAGTCAATATCCATGCCATAG...TCCACACTGGAAGCGGTTCTGATCAGTAACAATCAGGTTGGCTCTGTGGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGCCTTTCATTAATATGGCCGCTCGAGGAACTCGGAATGGATTTCCATCTAGTAGTGTCCGTAGCTaGACACAGTTCCCAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: AVPFINMAARGTRNGFPSSSVRS*TQFPSS Trigger: AGAGCTTGGGAACTGTGTGCAGCTACGGACACTACT...AGATGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTAAGATCAACAACCTCAACCGCCTATAGGTTCTCTACCTCCACCCTCCGCCCTCAGAACCAGAACTaGGACCTCATTCCTAAATCT | + |
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Preference number: 2 (lower is better) Translates to: FLRSTTSTAYRFSTSTLRPQNQN*DLIPKS Trigger: AGATTTAGGAATGAGGTCCCAGTTCTGGTTCTGAGG...GCGGAGGGTGGAGGTAGAGAACCTATAGGCGGTTGAGGTTGTTGATCTTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTGACACATGCTTCTCTGTTTAATTTTATGTaGAAAGTCCCACTAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: FSTSTLRTQADTELTHASLFNFM*KVPLTC Trigger: ACAGGTTAGTGGGACTTTGCACATAAAATTAAACAG...AGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR CAA 90 bp | CTGCTTATTTCTGCTGGCAAATTCTTCAGCTGGTTACTGGAAAGATaGAGTCGCAACAGACTGGACAGCAAAGCAAAATCAGCAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: LLISAGKFFSWLLER*SRNRLDSKAKSAGT Trigger: TGTGCCTGCTGATTTTGCTTTGCTGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCAGCTGAAGAATTTGCCAGCAGAAATAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGCCTTTCATTAATATGGCCGCTCGAGGAACTCGGAATGGATTTCCATCTGCCAGGAATTTCAAATaGAGATTTCCCAATGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: AVPFINMAARGTRNGFPSARNFK*RFPNEQ Trigger: CTGCTCATTGGGAAATCTTCATTTGAAATTCCTGGC...AGATGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTGCAAGACGATTGCTTGAAAGATCTAAATCTTCTAAGCAGGAAAGATGCGTGACACCTGGACACTaGAGGCTGGCTCTGTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: TVARRLLERSKSSKQERCVTPGH*RLALSY Trigger: ATAGGACAGAGCCAGCCTCCAGTGTCCAGGTGTCAC...GCATCTTTCCTGCTTAGAAGATTTAGATCTTTCAAGCAATCGTCTTGCAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTGTGCCTTTCATTAATATGGCCGCTCGAGGAACTCGGAATGGATTTCCAGGCAAATTCTTCAGCTaGTTACTGGAAAGATTGAGT | + |
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Preference number: 2 (lower is better) Translates to: AAVPFINMAARGTRNGFPGKFFS*LLERLS Trigger: ACTCAATCTTTCCAGTAACCAGCTGAAGAATTTGCC...TGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTAAGATCAACAACCTCAACCGCCTATAGGTTCTCTACCTCCACCCTCCGCTCAATATTTATAACCTaGGGCCTTTTCTGTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: FLRSTTSTAYRFSTSTLRSIFIT*GLFCLF Trigger: AAAGAGACAGAAAAGGCCCCAGGTTATAAATATTGA...GCGGAGGGTGGAGGTAGAGAACCTATAGGCGGTTGAGGTTGTTGATCTTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR CAA 90 bp | AGTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATaGGCATCACAATCCAAGTGCTTTAATCTTTTCATTCTGCTTATT | + |
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Preference number: 2 (lower is better) Translates to: SDSMLPTSGGTVSRR*ASQSKCFNLFILLI Trigger: AATAAGCAGAATGAAAAGATTAAAGCACTTGGATTGTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTAGTTTTAATCAGACTGTAAGGAGATTTCAGAATCAACGTTGTGGAAATAGGCTGACACTGAGCTaGCACATGCTTCTACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: QSSFNQTVRRFQNQRCGNRLTLS*HMLLLS Trigger: GCTCAGTAGAAGCATGTGTCAGCTCAGTGTCAGCCT...ATTTCCACAACGTTGATTCTGAAATCTCCTTACAGTCTGATTAAAACTAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072080.10 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAGGAGATTGGCATCACAATCCAAGTGCTTTAATCTTTTCATTCTGCTTAGGTTACTGGAAAGATTaGGTCGCAACAGACTGGACA | + |
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Preference number: 2 (lower is better) Translates to: SPGDWHHNPSALIFSFCLGYWKD*VATDWT Trigger: TGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACC...TAAGCAGAATGAAAAGATTAAAGCACTTGGATTGTGATGCCAATCTCCTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGCCTTTCATTAATATGGCCGCTCGAGGAACTCGGAATGGATTTCCATCTGCATCACAATCCAAGTaGTTTAATCTTTTCATTCTG | + |
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Preference number: 2 (lower is better) Translates to: AVPFINMAARGTRNGFPSASQSK*FNLFIL Trigger: CAGAATGAAAAGATTAAAGCACTTGGATTGTGATGC...AGATGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGAAACACTTTGAACCTGTTAAAGGAAAGATTGATCGTTTGCAGTTTTGTCAGCCTTTCCAAAGACTaGAGCAGGGCCATTTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SGNTLNLLKERLIVCSFVSLSKD*SRAISS Trigger: TGAGGAAATGGCCCTGCTGCAGTCTTTGGAAAGGCT...GACAAAACTGCAAACGATCAATCTTTCCTTTAACAGGTTCAAAGTGTTTCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACATCACTTCACAAACTGTAGACATTTAGTAGGAACGACCATAGCCCAAACAATAAAGCAATTCCAGTaGTTCCATGCTACCCACATC | + |
|
Preference number: 2 (lower is better) Translates to: SHHFTNCRHLVGTTIAQTIKQFQ*FHATHI Trigger: GATGTGGGTAGCATGGAATCACTGGAATTGCTTTAT...TGTTTGGGCTATGGTCGTTCCTACTAAATGTCTACAGTTTGTGAAGTGATGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTACTGATCAGAACCGCTTCCAGTGTGGAGATTCGATACAGAACTTCAGGAAGCAAGCATAACTCGTaGGATATAAATGAAAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLIRTASSVEIRYRTSGSKHNS*DINESL Trigger: CAAGCTTTCATTTATATCCCACGAGTTATGCTTGCT...TCCTGAAGTTCTGTATCGAATCTCCACACTGGAAGCGGTTCTGATCAGTAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTATAAATGTTCACATCACTTCACAAACTGTAGACATTTAGTAGGAACGACCATGACTTTGCAAGTGTaGTCTGTACTCTCCAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: HYKCSHHFTNCRHLVGTTMTLQV*SVLSSC Trigger: ACAGCTGGAGAGTACAGATCACACTTGCAAAGTCAT...GGTCGTTCCTACTAAATGTCTACAGTTTGTGAAGTGATGTGAACATTTATAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCCACTTGGTAGTGTCATaGCAGTCTCAGGAACAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: MNTKHVSLLALIFLRSTTHLVVS*QSQEQN Trigger: ATTCTGTTCCTGAGACTGCCATGACACTACCAAGTG...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCGCTGTATATATTGCATaGATTTCACTGCAGTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: MNTKHVSLLALIFLRSTTAVYIA*ISLQSM Trigger: CATAGACTGCAGTGAAATGCATGCAATATATACAGC...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCTTTGTAGAGCTTTTATaGAAGAACCAAGAAGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: MNTKHVSLLALIFLRSTTFVELL*KNQEAK Trigger: CTTGGCTTCTTGGTTCTTCCATAAAAGCTCTACAAA...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR GCA 72 bp | GCAGGGCCATTTCCTCAGGGACAGACCGCAGCTTATTaGCCCTTAGGTCCAGGACAAGGATGGCCTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AGPFPQGQTAAY*PLGPGQGWPAG Trigger: ACCTGCAGGCCATCCTTGTCCTGGACCTAAGGGGCAATAAGCTGCGGTCTGTCCCTGAGGAAATGGCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR TCA 72 bp | CTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTaGCACATGCTTCTACTGAGCTGGCTACTCTCGACT | + |
|
Preference number: 3 (lower is better) Translates to: LPPPSARRLTLS*HMLLLSWLLST Trigger: AGTCGAGAGTAGCCAGCTCAGTAGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072080.10 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR CCA 72 bp | ACCGCAGCTTATTGCCCCTTAGGTCCAGGACAAGGATaGCCTGCAGGTGCTGAAGATGCTCTGCCCCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: TAAYCPLGPGQG*PAGAEDALPLT Trigger: AGTTAGGGGCAGAGCATCTTCAGCACCTGCAGGCCATCCTTGTCCTGGACCTAAGGGGCAATAAGCTGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR GCA 72 bp | CTTCTAAGCAGGAAAGATGCTCAAATCCCTCGGGGATaGAAGTCAGCTCATTGTGCTGGAGGTGCAGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSRKDAQIPRG*KSAHCAGGAAS Trigger: GGACGCTGCACCTCCAGCACAATGAGCTGACTTGCATCCCCGAGGGATTTGAGCATCTTTCCTGCTTAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCGCAACAGACTGGACAGCAAAGCAAAATCAGCAGGCACAGTTGCAAGACGAATGCAAGTCAGCTCATaGTGCTGGAGGTGCAGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: SRNRLDSKAKSAGTVARRMQVSS*CWRCSV Trigger: GACGCTGCACCTCCAGCACAATGAGCTGACTTGCAT...TCGTCTTGCAACTGTGCCTGCTGATTTTGCTTTGCTGTCCAGTCTGTTGCGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTCCAGTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGATGCAAGTCAGCTCATaGTGCTGGAGGTGCAGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: NSSDSMLPTSGGTVSRRLMQVSS*CWRCSV Trigger: GACGCTGCACCTCCAGCACAATGAGCTGACTTGCAT...CAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCACTGGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR TCA 72 bp | TCTTCTGAGGGTCCACAGAGCCAACCTGATTGTTACTaGTCAGAACCGCTTCCAGTGTGGAGATTCGATACA | + |
|
Preference number: 3 (lower is better) Translates to: SSEGPQSQPDCY*SEPLPVWRFDT Trigger: TGTATCGAATCTCCACACTGGAAGCGGTTCTGATCAGTAACAATCAGGTTGGCTCTGTGGACCCTCAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR CCA 72 bp | GCTTTGGGTCTCTTGACCATACTCTCTGATGGGATCTaGCTTCATTACCATAAGTGCAGTACCCGGGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: ALGLLTILSDGI*LHYHKCSTRVT Trigger: TGTTACCCGGGTACTGCACTTATGGTAATGAAGCCAGATCCCATCAGAGAGTATGGTCAAGAGACCCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGCAGGCAGTATTTTCAGTTaGTTATGGCTGACATTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSDSMLPTSGGTVSRRLAGSIFS*LWLTLS Trigger: ACTTAATGTCAGCCATAACAAACTGAAAATACTGCC...TGCCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123028.2 |
||
| 3UTR-3UTR CAA 90 bp | CGAGGAACTCGGAATGGATTTCCATCTAGCAGTAGTGTCCGTAGCTGCACACAGAGACTACTAATATCATaGTTGCTCAGGTCAAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RGTRNGFPSSSSVRSCTQRLLIS*LLRSSL Trigger: AAGGCTTGACCTGAGCAACAATGATATTAGTAGTCT...CTGTGTGCAGCTACGGACACTACTGCTAGATGGAAATCCATTCCGAGTTCCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR CCA 72 bp | AATACTCCAGCACAGCAGCTGTGCCTTTCATTAATATaGCCGCTCGAGGAACTCGGAATGGATTTCCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: NTPAQQLCLSLI*PLEELGMDFHL Trigger: TAGATGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGCTGCTGTGCTGGAGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAAAATCAGCAGGCACAGTTGCAAGACGATTGCTTGAAAGATCTAAATCTTATGCAAGTCAGCTCATaGTGCTGGAGGTGCAGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: KQNQQAQLQDDCLKDLNLMQVSS*CWRCSV Trigger: GACGCTGCACCTCCAGCACAATGAGCTGACTTGCAT...AAGATTTAGATCTTTCAAGCAATCGTCTTGCAACTGTGCCTGCTGATTTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR TCA 72 bp | CTGCTGGCAAATTCTTCAGCTGGTTACTGGAAAGATTaGGTCGCAACAGACTGGACAGCAAAGCAAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLANSSAGYWKD*VATDWTAKQNQ Trigger: CTGATTTTGCTTTGCTGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCAGCTGAAGAATTTGCCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR TCA 72 bp | AATCTAGCAGCTTTAGTGTGGCTATGGCATGGATATTaGCTCTGGCTTCACTTGGTAGTGTCATGGCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NLAALVWLWHGY*LWLHLVVSWQS Trigger: AGACTGCCATGACACTACCAAGTGAAGCCAGAGTCAATATCCATGCCATAGCCACACTAAAGCTGCTAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTGTGCCTTTCATTAATATGGCCGCTCGAGGAACTCGGAATGGATTTCCAACTTCAGGAAACACTTaGAACCTGTTAAAGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AAVPFINMAARGTRNGFPTSGNT*NLLKER Trigger: TCTTTCCTTTAACAGGTTCAAAGTGTTTCCTGAAGT...TGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR TCA 72 bp | TTCAGCTCAACAATCCTTTGTGGAATCTCGCACAGCTaGTTTTTGCTGAAGTTGATGGAAGTGATGAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FSSTILCGISHS*FLLKLMEVMRV Trigger: GACCCTCATCACTTCCATCAACTTCAGCAAAAATCAGCTGTGCGAGATTCCACAAAGGATTGTTGAGCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR GCA 72 bp | TGTGTCAGTGAGCTGAATTCTACACGCTGTATATATTaGATGCATTTCACTGCAGTCTATGGACATGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: CVSELNSTRCIY*MHFTAVYGHAL Trigger: AAGGGCATGTCCATAGACTGCAGTGAAATGCATGCAATATATACAGCGTGTAGAATTCAGCTCACTGACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR CCA 72 bp | TCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTaGTGTATAGCAGAGCCATTTTTAGGTTCTGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SADALCTDNSAV*CIAEPFLGSVV Trigger: TACAACAGAACCTAAAAATGGCTCTGCTATACACCACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR TCA 72 bp | CTTTGCTGTCTATGTGGACATTCTGATGTGTGTCAGTaGGCTGAATTCTACACGCTGTATATATTGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LCCLCGHSDVCQ*AEFYTLYILHA Trigger: TGCATGCAATATATACAGCGTGTAGAATTCAGCTCACTGACACACATCAGAATGTCCACATAGACAGCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR CCA 72 bp | ATCCAACACCATTTCCTTCAGCTCAACAATCCTTTGTaGAATCTCGCACAGCTGATTTTTGCTGAAGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IQHHFLQLNNPL*NLAQLIFAEVD Trigger: ATCAACTTCAGCAAAAATCAGCTGTGCGAGATTCCACAAAGGATTGTTGAGCTGAAGGAAATGGTGTTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTACTGATCAGAACCGCTTCCAGTGTGGAGATTCGATACAGAACTTCAGGACTGTTAAAGGAAAGATaGATCGTTTGCAGTTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLLIRTASSVEIRYRTSGLLKER*IVCSFV Trigger: GACAAAACTGCAAACGATCAATCTTTCCTTTAACAG...TCCTGAAGTTCTGTATCGAATCTCCACACTGGAAGCGGTTCTGATCAGTAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCCCTTCTGTCCATCCTTaGCTGTCTATGTGGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: MNTKHVSLLALIFLRSTTPSVHP*LSMWTF Trigger: GAATGTCCACATAGACAGCAAAGGATGGACAGAAGG...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR-3UTR CAA 90 bp | TCACATCACTTCACAAACTGTAGACATTTAGTAGGAACGACCATAGCCCAAACACTATCATCTTTGATCTaGCTGCGCAGGTATTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHHFTNCRHLVGTTIAQTLSSLI*LRRYFR Trigger: TCTAAAATACCTGCGCAGCAAGATCAAAGATGATAG...TGTTTGGGCTATGGTCGTTCCTACTAAATGTCTACAGTTTGTGAAGTGATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR TCA 72 bp | CTTAGAGGATTTCCTTCTAGTGCCAGGAATTTCAAATaGAGATTTCCCAATGAGCAGGGCAGACTACTAATA | + |
|
Preference number: 3 (lower is better) Translates to: LRGFPSSARNFK*RFPNEQGRLLI Trigger: TATTAGTAGTCTGCCCTGCTCATTGGGAAATCTTCATTTGAAATTCCTGGCACTAGAAGGAAATCCTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR GCA 72 bp | GCAAAGCAAAATCAGCAGGCACAGTTGCAAGACGATTaGTTGAAAGATCTAAATCTTCTAAGCAGGAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: AKQNQQAQLQDD*LKDLNLLSRKD Trigger: ATCTTTCCTGCTTAGAAGATTTAGATCTTTCAAGCAATCGTCTTGCAACTGTGCCTGCTGATTTTGCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| 3UTR GCA 72 bp | CATAACAACCTTGAAAGAAAGCTGTTTAATTTTATGTaGAAAGTCCCACTAACCTGTATTTCAACTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HNNLERKLFNFM*KVPLTCISTLP Trigger: TGGCAGAGTTGAAATACAGGTTAGTGGGACTTTGCACATAAAATTAAACAGCTTTCTTTCAAGGTTGTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR CAA 72 bp | AGCAGGGCCATTTCCTCAGGGACAGACCGCAGCTTATaGCCCCTTAGGTCCAGGACAAGGATGGCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAISSGTDRSL*PLRSRTRMACR Trigger: CCTGCAGGCCATCCTTGTCCTGGACCTAAGGGGCAATAAGCTGCGGTCTGTCCCTGAGGAAATGGCCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGCAACAGACTGGACAGCAAAGCAAAATCAGCAGGCACAGTTGCAAGACGAGCCGCTGCTTCTCGCTaGCTTCAGCAGGCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNRLDSKAKSAGTVARRAAASR*LQQALG Trigger: CCCCAGGGCCTGCTGAAGGCAGCGAGAAGCAGCGGC...TCGTCTTGCAACTGTGCCTGCTGATTTTGCTTTGCTGTCCAGTCTGTTGCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS-3UTR GCA 90 bp | AATTCCAGTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGCCGCTGCTTCTCGCTaGCTTCAGCAGGCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSSDSMLPTSGGTVSRRLAAASR*LQQALG Trigger: CCCCAGGGCCTGCTGAAGGCAGCGAGAAGCAGCGGC...CAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCACTGGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTGACACATGCTTCTATCAGCTTCATCTTCTaGGGGTCCACAGAGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: FSTSTLRTQADTELTHASISFIF*GSTEPT Trigger: GGTTGGCTCTGTGGACCCTCAGAAGATGAAGCTGAT...AGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGTTACTGGAAAGATTGAGTCGCAACAGACTGGACAGCAAAGCAAAATCGCCGCTGCTTCTCGCTaGCTTCAGCAGGCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLVTGKIESQQTGQQSKIAAASR*LQQALG Trigger: CCCCAGGGCCTGCTGAAGGCAGCGAGAAGCAGCGGC...GATTTTGCTTTGCTGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAAATTCTTCAGCTGGTTACTGGAAAGATTGAGTCGCAACAGACTGGACGCCTTCAGCAGGCCCTaGGGAACAGAGGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGKFFSWLLERLSRNRLDAFSRP*GTEGPL Trigger: CAGAGGCCCCTCTGTTCCCCAGGGCCTGCTGAAGGC...GTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCAGCTGAAGAATTTGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
||
| CDS-3UTR GCA 90 bp | TGGTTACTGGAAAGATTGAGTCGCAACAGACTGGACAGCAAAGCAAAATCAGCAGCCGCTGCTTCTCGCTaGCTTCAGCAGGCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLERLSRNRLDSKAKSAAAASR*LQQALG Trigger: CCCCAGGGCCTGCTGAAGGCAGCGAGAAGCAGCGGC...TGCTGATTTTGCTTTGCTGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS-3UTR CCA 90 bp | ACATCAGGAGGCACAGTCTCCAGGAGATTGGCATCACAATCCAAGTGCTTTAATGCCTTCAGCAGGCCCTaGGGAACAGAGGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSGGTVSRRLASQSKCFNAFSRP*GTEGPL Trigger: CAGAGGCCCCTCTGTTCCCCAGGGCCTGCTGAAGGC...ATTAAAGCACTTGGATTGTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
||
| CDS-3UTR CCA 90 bp | TATTCCTCCGCAAATAAAGCAATTCCAGTGATTCCATGCTACCCACATCAGGAGGCCTTCAGCAGGCCCTaGGGAACAGAGGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSSANKAIPVIPCYPHQEAFSRP*GTEGPL Trigger: CAGAGGCCCCTCTGTTCCCCAGGGCCTGCTGAAGGC...CTCCTGATGTGGGTAGCATGGAATCACTGGAATTGCTTTATTTGCGGAGGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTGACACATGCTTCTCTATGGCATGGATATTaGCTCTGGCTTCACTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSTSTLRTQADTELTHASLWHGY*LWLHLV Trigger: TACCAAGTGAAGCCAGAGTCAATATCCATGCCATAG...AGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CCA 90 bp | GGGTTAGGGGTAGGGTGTAGCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATACAGTTCCCAAGCTCTaGGGGAATCTGCAAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGVGCSLEASADALCTDTVPKL*GNLQKV Trigger: GACCTTTTGCAGATTCCCCCAGAGCTTGGGAACTGT...ATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGCTACACCCTACCCCTAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CCA 90 bp | GTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGCATCACCAAAGCACAGCACTGTaGTTTTACACTGGGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VIPCYPHQEAQSPGDWHHQSTAL*FYTGPN Trigger: GTTTGGCCCAGTGTAAAACCACAGTGCTGTGCTTTG...GTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150525.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTGGTGTAAGCCTTTCCAAAGACTaGAGCAGGGCCATTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWKHLQMRFVQIIALCGVSLSKD*SRAISS Trigger: TGAGGAAATGGCCCTGCTGCAGTCTTTGGAAAGGCT...TACACCACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR GCA 90 bp | TACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGCATCACAATCCAAGTGCTCAGTTGCAAGACGATTaGTTGAAAGATCCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YPHQEAQSPGDWHHNPSAQLQDD*LKDPSP Trigger: CGGGGAAGGATCTTTCAAGCAATCGTCTTGCAACTG...AGCACTTGGATTGTGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200540.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGGAGATTGGCATCACAATCCAAGTGCTTTAATCTTTTCATTCTGCTTAGCCTTCAGCAGGCCCTaGGGAACAGAGGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGDWHHNPSALIFSFCLAFSRP*GTEGPL Trigger: CAGAGGCCCCTCTGTTCCCCAGGGCCTGCTGAAGGC...TAAGCAGAATGAAAAGATTAAAGCACTTGGATTGTGATGCCAATCTCCTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| CDS-3UTR TCA 90 bp | TTCTCTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTGACACATGCTTCTGGAAGAGATGTCAGCTaGTTATCATGTATATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSTSTLRTQADTELTHASGRDVS*LSCISR Trigger: TCTTGATATACATGATAATCAGCTGACATCTCTTCC...AGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR GCA 90 bp | CATTATAAATGTTCACATCACTTCACAAACTGTAGACATTTAGTAGGAACGACCGCCGCTGCTTCTCGCTaGCTTCAGCAGGCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HYKCSHHFTNCRHLVGTTAAASR*LQQALG Trigger: CCCCAGGGCCTGCTGAAGGCAGCGAGAAGCAGCGGC...GGTCGTTCCTACTAAATGTCTACAGTTTGTGAAGTGATGTGAACATTTATAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072080.10 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTGACACATGCTTCTAGCAAGCATAACTCGTaGGATATAAATGAAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSTSTLRTQADTELTHASSKHNS*DINESL Trigger: CAAGCTTTCATTTATATCCCACGAGTTATGCTTGCT...AGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CCA 90 bp | GGTGTAGCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTTGCCTTTCATTAATATaGCCGCTCGAGGAACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVAWKHLQMRFVQIIALCCLSLI*PLEELG Trigger: TCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCA...ACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGCTACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR TCA 90 bp | ATGCTCAAATCCCTCGGGGATGCAAGTCAGCTCATTGTGCTGGAGGTGCAGCGTTTCAGTAGAACTGAATaGAAGATTCTGATTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MLKSLGDASQLIVLEVQRFSRTE*KILISL Trigger: GAGGCTAATCAGAATCTTTCATTCAGTTCTACTGAA...ACGCTGCACCTCCAGCACAATGAGCTGACTTGCATCCCCGAGGGATTTGAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 |
||
| CDS-3UTR CCA 90 bp | CATTATAAATGTTCACATCACTTCACAAACTGTAGACATTTAGTAGGAACGACCGCCTTCAGCAGGCCCTaGGGAACAGAGGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HYKCSHHFTNCRHLVGTTAFSRP*GTEGPL Trigger: CAGAGGCCCCTCTGTTCCCCAGGGCCTGCTGAAGGC...GGTCGTTCCTACTAAATGTCTACAGTTTGTGAAGTGATGTGAACATTTATAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072080.10 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTGGTGTATCATCAGAGAGAGACTaGAGTTTATTGCTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AWKHLQMRFVQIIALCGVSSERD*SLLLEM Trigger: CATCTCCAGCAATAAACTTCAGTCTCTCTCTGATGA...TACACCACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTGGTGTAATAAAGCAATTCCAGTaGTTCCATGCTACCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: AWKHLQMRFVQIIALCGVIKQFQ*FHATHI Trigger: GATGTGGGTAGCATGGAATCACTGGAATTGCTTTAT...TACACCACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR GCA 90 bp | GAGAAATTCCTAAGTGGTGACGCAGCTTTGGGTCTCTTGACCATACTCTCTGATATTCCAGTGATTCCATaGTACCCACATCAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKFLSGDAALGLLTILSDIPVIP*YPHQEA Trigger: TGCCTCCTGATGTGGGTAGCATGGAATCACTGGAAT...ATCAGAGAGTATGGTCAAGAGACCCAAAGCTGCGTCACCACTTAGGAATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR CAA 72 bp | GAGAAATTCCTAAGTGGTGACGCAGCTTTGGGTCTCTaGACCATACTCTCTGATGGGATCTGGCTTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKFLSGDAALGL*TILSDGIWLHY Trigger: GTAATGAAGCCAGATCCCATCAGAGAGTATGGTCAAGAGACCCAAAGCTGCGTCACCACTTAGGAATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATTCCTAAGTGGTGACGCAGCTTTGGGTCTCTTGACCATACTCTCTGATAGTGTGGCTATGGCATaGATATTGACTCTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKFLSGDAALGLLTILSDSVAMA*ILTLAS Trigger: TGAAGCCAGAGTCAATATCCATGCCATAGCCACACT...ATCAGAGAGTATGGTCAAGAGACCCAAAGCTGCGTCACCACTTAGGAATTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR TCA 90 bp | GCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTGGTGTATTCAGTAGAACTGAATaGAAGATTCTGATTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWKHLQMRFVQIIALCGVFSRTE*KILISL Trigger: GAGGCTAATCAGAATCTTTCATTCAGTTCTACTGAA...TACACCACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR TCA 90 bp | CATTATAAATGTTCACATCACTTCACAAACTGTAGACATTTAGTAGGAACGACCATGGCCTGCAGGTGCTaGAGATGCTCTGCCCCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HYKCSHHFTNCRHLVGTTMACRC*RCSAPN Trigger: GTTAGGGGCAGAGCATCTTCAGCACCTGCAGGCCAT...GGTCGTTCCTACTAAATGTCTACAGTTTGTGAAGTGATGTGAACATTTATAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR CAA 72 bp | TCTGCTGGCAAATTCTTCAGCTGGTTACTGGAAAGATaGAGTCGCAACAGACTGGACAGCAAAGCAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SAGKFFSWLLER*SRNRLDSKAKS Trigger: TGATTTTGCTTTGCTGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCAGCTGAAGAATTTGCCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS-3UTR GCA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCCAAGTCAGCTCATTGTaGTGGAGGTGCAGCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MNTKHVSLLALIFLRSTTQVSSL*WRCSVL Trigger: GAGGACGCTGCACCTCCAGCACAATGAGCTGACTTG...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR GCA 90 bp | GCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTGGTGTAGCATCACAATCCAAGTaGTTTAATCTTTTCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWKHLQMRFVQIIALCGVASQSK*FNLFIL Trigger: CAGAATGAAAAGATTAAAGCACTTGGATTGTGATGC...TACACCACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CCA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCGGTCCAGGACAAGGATaGCCTGCAGGTGCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MNTKHVSLLALIFLRSTTGPGQG*PAGAED Trigger: ATCTTCAGCACCTGCAGGCCATCCTTGTCCTGGACC...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR TCA 90 bp | ATTCTTCAGCTGGTTACTGGAAAGATTGAGTCGCAACAGACTGGACAGCAAAGCTTCAGTAGAACTGAATaGAAGATTCTGATTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILQLVTGKIESQQTGQQSFSRTE*KILISL Trigger: GAGGCTAATCAGAATCTTTCATTCAGTTCTACTGAA...GCTTTGCTGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCAGCTGAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCAGCTGGTTACTGGAAAGATTGAGTCGCAACAGACTGGACAGCAAAGCATTCAGTAGAACTGAATaGAAGATTCTGATTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFSWLLERLSRNRLDSKAFSRTE*KILISL Trigger: GAGGCTAATCAGAATCTTTCATTCAGTTCTACTGAA...TGCTTTGCTGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACCAGCTGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 |
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| 3UTR CAA 72 bp | ACAGACTGGACAGCAAAGCAAAATCAGCAGGCACAGTaGCAAGACGATTGCTTGAAAGATCTAAATCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TDWTAKQNQQAQ*QDDCLKDLNLL Trigger: TAGAAGATTTAGATCTTTCAAGCAATCGTCTTGCAACTGTGCCTGCTGATTTTGCTTTGCTGTCCAGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| 3UTR CAA 72 bp | GATATCCAACACCATTTCCTTCAGCTCAACAATCCTTaGTGGAATCTCGCACAGCTGATTTTTGCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DIQHHFLQLNNP*WNLAQLIFAEV Trigger: AACTTCAGCAAAAATCAGCTGTGCGAGATTCCACAAAGGATTGTTGAGCTGAAGGAAATGGTGTTGGATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTAGTTTTAATCAGACTGTAAGGAGATTTCAGAATCAACGTTGTGGAAATAGTAGTGTCCGTAGCTaGACACAGTTCCCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSFNQTVRRFQNQRCGNSSVRS*TQFPSS Trigger: AGAGCTTGGGAACTGTGTGCAGCTACGGACACTACT...ATTTCCACAACGTTGATTCTGAAATCTCCTTACAGTCTGATTAAAACTAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR TCA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCGGTTACTGGAAAGATTaGGTCGCAACAGACTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: MNTKHVSLLALIFLRSTTGYWKD*VATDWT Trigger: TGTCCAGTCTGTTGCGACTCAATCTTTCCAGTAACC...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR TCA 90 bp | ATGTGTGTCAGTGAGCTGAATTCTACACGCTGTATATATTGCATGCATTTCACTGCCAGGAATTTCAAATaGAGATTTCCCAATGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MCVSELNSTRCIYCMHFTARNFK*RFPNEQ Trigger: CTGCTCATTGGGAAATCTTCATTTGAAATTCCTGGC...AGTGAAATGCATGCAATATATACAGCGTGTAGAATTCAGCTCACTGACACACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR TCA 90 bp | CATTTCACTGCAGTCTATGGACATGCCCTTTGTAGAGCTTTTATGGAAGAACCAAAAAATGTCAATTTCTaGAGCAAGCATAACTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HFTAVYGHALCRAFMEEPKNVNF*SKHNSW Trigger: CCACGAGTTATGCTTGCTTCAGAAATTGACATTTTT...TGGTTCTTCCATAAAAGCTCTACAAAGGGCATGTCCATAGACTGCAGTGAAATG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| 3UTR CAA 72 bp | AGCAAAGCAAAATCAGCAGGCACAGTTGCAAGACGATaGCTTGAAAGATCTAAATCTTCTAAGCAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKAKSAGTVARR*LERSKSSKQER Trigger: TCTTTCCTGCTTAGAAGATTTAGATCTTTCAAGCAATCGTCTTGCAACTGTGCCTGCTGATTTTGCTTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| CDS-3UTR TCA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCGGAATCTCGCACAGCTaGTTTTTGCTGAAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: MNTKHVSLLALIFLRSTTGISHS*FLLKLM Trigger: CATCAACTTCAGCAAAAATCAGCTGTGCGAGATTCC...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CCA 90 bp | CATTATAAATGTTCACATCACTTCACAAACTGTAGACATTTAGTAGGAACGACCCACTTGGTAGTGTCATaGCAGTCTCAGGAACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HYKCSHHFTNCRHLVGTTHLVVS*QSQEQN Trigger: ATTCTGTTCCTGAGACTGCCATGACACTACCAAGTG...GGTCGTTCCTACTAAATGTCTACAGTTTGTGAAGTGATGTGAACATTTATAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR TCA 90 bp | CAGTCTAGTTTTAATCAGACTGTAAGGAGATTTCAGAATCAACGTTGTGGAAATTGGTTCTATCATCTTTaGTCTTGCTGCGCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: QSSFNQTVRRFQNQRCGNWFYHL*SCCAGI Trigger: AATACCTGCGCAGCAAGATCAAAGATGATAGAACCA...ATTTCCACAACGTTGATTCTGAAATCTCCTTACAGTCTGATTAAAACTAGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR CCA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCGGCAAATTCTTCAGCTaGTTACTGGAAAGATTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MNTKHVSLLALIFLRSTTGKFFS*LLERLS Trigger: ACTCAATCTTTCCAGTAACCAGCTGAAGAATTTGCC...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CCA 90 bp | AACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCTCATCTGCTTATTTCTGCTaGCAAATTCTTCAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTKHVSLLALIFLRSTTSSAYFC*QILQLV Trigger: AACCAGCTGAAGAATTTGCCAGCAGAAATAAGCAGA...TGAGGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR TCA 90 bp | CAGTCTAGTTTTAATCAGACTGTAAGGAGATTTCAGAATCAACGTTGTGGAAATCTCGTGGGATATAAATaGAAGCTTGTTAAAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSFNQTVRRFQNQRCGNLVGYK*KLVKTE Trigger: CTCAGTTTTAACAAGCTTTCATTTATATCCCACGAG...ATTTCCACAACGTTGATTCTGAAATCTCCTTACAGTCTGATTAAAACTAGACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| 3UTR CAA 72 bp | TTTTTGTGGCATCAAATAGGTCATCAGGAATCAAGGTaGCTTGTTTATCACTATAATCTAGCAGCTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWHQIGHQESR*LVYHYNLAALV Trigger: CACTAAAGCTGCTAGATTATAGTGATAAACAAGCAACCTTGATTCCTGATGACCTATTTGATGCCACAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS CCA 90 bp | CAGTTTGTTATGGCTTCCCCGAGGTTCCTTCCCGCCAAGTTGAGTTaGCCGCTGCTTCTCGCTGCCTTCAGCAGGCCCTGGGGAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QFVMASPRFLPAKLS*PLLLAAFSRPWGTE Trigger: CTCTGTTCCCCAGGGCCTGCTGAAGGCAGCGAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAACCTCGGGGAAGCCATAACAAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156597.8 |
||
| CDS CCA 90 bp | TGCTTGAAAGATCCTTCCCCGAGGTTCCTTCCCGCCAAGTTGAGTTaGCCGCTGCTTCTCGCTGCCTTCAGCAGGCCCTGGGGAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLKDPSPRFLPAKLS*PLLLAAFSRPWGTE Trigger: CTCTGTTCCCCAGGGCCTGCTGAAGGCAGCGAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAACCTCGGGGAAGGATCTTTCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200540.2 |
||
| CDS-3UTR CAA 90 bp | AGTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGCATCATTCCTTCCCGCCAAGTaGAGTTGGCCGCTGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSMLPTSGGTVSRRLASFLPAK*SWPLLL Trigger: GAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAA...TGATGCCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
||
| CDS-3UTR CAA 90 bp | ATTCCAGTGATTCCATGCTACCCACATCAGGAGGCACAGTCTCCAGGAGATTGGTTCCTTCCCGCCAAGTaGAGTTGGCCGCTGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPVIPCYPHQEAQSPGDWFLPAK*SWPLLL Trigger: GAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAA...CCAATCTCCTGGAGACTGTGCCTCCTGATGTGGGTAGCATGGAATCACTGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
||
| CDS-3UTR CAA 90 bp | AGTGACACCTGGACACTGGAGGCTGGCTCTGTCCTATCCCGAGTGACCATGCCCAATCAGCAGGCACAGTaGCAAGACGATTGCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SDTWTLEAGSVLSRVTMPNQQAQ*QDDCLK Trigger: TTTCAAGCAATCGTCTTGCAACTGTGCCTGCTGATT...GGGCATGGTCACTCGGGATAGGACAGAGCCAGCCTCCAGTGTCCAGGTGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGTGCCTTTCATTAATATGGCCGCTCGAGGAACTCGGAATGGATTTCCATTCCTTCCCGCCAAGTaGAGTTGGCCGCTGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAVPFINMAARGTRNGFPFLPAK*SWPLLL Trigger: GAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAA...TGGAAATCCATTCCGAGTTCCTCGAGCGGCCATATTAATGAAAGGCACAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150525.8 ENSMUST00000156597.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTAGCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTATGCAAGTCAGCTCATaGTGCTGGAGGTGCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVAWKHLQMRFVQIIALCMQVSS*CWRCSV Trigger: GACGCTGCACCTCCAGCACAATGAGCTGACTTGCAT...ACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGCTACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
||
| CDS-3UTR CAA 90 bp | TTCTCTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTGACACATGCTTCTCTACTAATATCATTGTaGCTCAGGTCAAGCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: FSTSTLRTQADTELTHASLLISL*LRSSLS Trigger: GGAAAGGCTTGACCTGAGCAACAATGATATTAGTAG...AGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR CAA 90 bp | CATTTCACTGCAGTCTATGGACATGCCCTTTGTAGAGCTTTTATGGAAGAACCATTCCTTCCCGCCAAGTaGAGTTGGCCGCTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: HFTAVYGHALCRAFMEEPFLPAK*SWPLLL Trigger: GAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAA...TGGTTCTTCCATAAAAGCTCTACAAAGGGCATGTCCATAGACTGCAGTGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR CAA 90 bp | TTCTCTACCTCCACCCTCCGCACGCAGGCTGACACTGAGCTGACACATGCTTCTTTGTTAAAACTGAGGTaGATATCCAACACCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: FSTSTLRTQADTELTHASLLKLR*ISNTIS Trigger: GGAAATGGTGTTGGATATCAACCTCAGTTTTAACAA...AGAAGCATGTGTCAGCTCAGTGTCAGCCTGCGTGCGGAGGGTGGAGGTAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR CAA 90 bp | ACAGTTGCAAGACGATTGCTTGAAAGATCTAAATCTTCTAAGCAGGAAAGATGCTTCCTTCCCGCCAAGTaGAGTTGGCCGCTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: TVARRLLERSKSSKQERCFLPAK*SWPLLL Trigger: GAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAA...GCATCTTTCCTGCTTAGAAGATTTAGATCTTTCAAGCAATCGTCTTGCAACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 |
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| CDS-3UTR CAA 90 bp | GAGAAATTCCTAAGTGGTGACGCAGCTTTGGGTCTCTTGACCATACTCTCTGATTTGGTTCTATCATCTTaGATCTTGCTGCGCAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: EKFLSGDAALGLLTILSDLVLSS*ILLRRY Trigger: ATACCTGCGCAGCAAGATCAAAGATGATAGAACCAA...ATCAGAGAGTATGGTCAAGAGACCCAAAGCTGCGTCACCACTTAGGAATTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR CAA 90 bp | GGTGTAGCCTGGAAGCATCTGCAGATGCGCTTTGTACAGATAATAGCGCTGTGTACTTCAGGAAACACTTaGAACCTGTTAAAGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: GVAWKHLQMRFVQIIALCTSGNT*NLLKER Trigger: TCTTTCCTTTAACAGGTTCAAAGTGTTTCCTGAAGT...ACACAGCGCTATTATCTGTACAAAGCGCATCTGCAGATGCTTCCAGGCTACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR CAA 90 bp | CTTATTTCTGCTGGCAAATTCTTCAGCTGGTTACTGGAAAGATTGAGTCGCAACACAGTTGCAAGACGATaGCTTGAAAGATCCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LISAGKFFSWLLERLSRNTVARR*LERSFP Trigger: GGGGAAGGATCTTTCAAGCAATCGTCTTGCAACTGT...GTTGCGACTCAATCTTTCCAGTAACCAGCTGAAGAATTTGCCAGCAGAAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200540.2 |
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| CDS-3UTR CAA 90 bp | GAGAAATTCCTAAGTGGTGACGCAGCTTTGGGTCTCTTGACCATACTCTCTGATCTGTTAAAGGAAAGATaGATCGTTTGCAGTTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: EKFLSGDAALGLLTILSDLLKER*IVCSFV Trigger: GACAAAACTGCAAACGATCAATCTTTCCTTTAACAG...ATCAGAGAGTATGGTCAAGAGACCCAAAGCTGCGTCACCACTTAGGAATTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS TCA 90 bp | TTTGGTCAGATCTGTCTGATCCCACCATCGTTCAGTAGAACTGAATaGAAGATTCTGATTAGCCTCTTCAGGAATGTCCACATTTATTCT | + |
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Preference number: 5 (lower is better) Translates to: FGQICLIPPSFSRTE*KILISLFRNVHIYS Trigger: AGAATAAATGTGGACATTCCTGAAGAGGCTAATCAGAATCTTTCATTCAGTTCTACTGAACGATGGTGGGATCAGACAGATCTGACCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072080.10 ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 |
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| CDS-3UTR CAA 90 bp | CATTTCACTGCAGTCTATGGACATGCCCTTTGTAGAGCTTTTATGGAAGAACCAGGCAGTATTTTCAGTTaGTTATGGCTGACATTAAGT | + |
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Preference number: 5 (lower is better) Translates to: HFTAVYGHALCRAFMEEPGSIFS*LWLTLS Trigger: ACTTAATGTCAGCCATAACAAACTGAAAATACTGCC...TGGTTCTTCCATAAAAGCTCTACAAAGGGCATGTCCATAGACTGCAGTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR CAA 90 bp | AACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCTCAAGACTACTAATATCATaGTTGCTCAGGTCAAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: NTKHVSLLALIFLRSTTSRLLIS*LLRSSL Trigger: AAGGCTTGACCTGAGCAACAATGATATTAGTAGTCT...TGAGGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS-3UTR CAA 90 bp | ATGAACACGAAGCATGTATCTTTATTAGCACTGATTTTCCTAAGATCAACAACCCTATCATCTTTGATCTaGCTGCGCAGGTATTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: MNTKHVSLLALIFLRSTTLSSLI*LRRYFR Trigger: TCTAAAATACCTGCGCAGCAAGATCAAAGATGATAG...GGTTGTTGATCTTAGGAAAATCAGTGCTAATAAAGATACATGCTTCGTGTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072080.10 |
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| CDS GCA 72 bp | TCAGCAGGCCCTGGGGAACAGAGGGGCCTCTGTCCTTaGCCTCCGCGTGGAATCCCGCACGAGGGTCAAACC | + |
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Preference number: 6 (lower is better) Translates to: SAGPGEQRGLCP*PPRGIPHEGQT Trigger: GGTTTGACCCTCGTGCGGGATTCCACGCGGAGGGCAAGGACAGAGGCCCCTCTGTTCCCCAGGGCCTGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000072080.10 ENSMUST00000131518.8 ENSMUST00000150525.8 ENSMUST00000156597.8 ENSMUST00000200540.2 |
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| CDS TCA 72 bp | ACTGAGGGACTTCCCCGAGGTTCCTTCCCGCCAAGTTaGGTTGGCCGCTGCTTCTCGCTGCCTTCAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: TEGLPRGSFPPS*VGRCFSLPSAG Trigger: GCCTGCTGAAGGCAGCGAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAACCTCGGGGAAGTCCCTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072080.10 ENSMUST00000131518.8 ENSMUST00000150525.8 |
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| CDS TCA 72 bp | TTGTTATGGCTTCCCCGAGGTTCCTTCCCGCCAAGTTaGGTTGGCCGCTGCTTCTCGCTGCCTTCAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLWLPRGSFPPS*VGRCFSLPSAG Trigger: GCCTGCTGAAGGCAGCGAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAACCTCGGGGAAGCCATAACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156597.8 |
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| CDS CAA 72 bp | TTTGTTATGGCTTCCCCGAGGTTCCTTCCCGCCAAGTaGAGTTGGCCGCTGCTTCTCGCTGCCTTCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: FVMASPRFLPAK*SWPLLLAAFSR Trigger: CCTGCTGAAGGCAGCGAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAACCTCGGGGAAGCCATAACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156597.8 |
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| CDS CAA 72 bp | TTGAAAGATCCTTCCCCGAGGTTCCTTCCCGCCAAGTaGAGTTGGCCGCTGCTTCTCGCTGCCTTCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LKDPSPRFLPAK*SWPLLLAAFSR Trigger: CCTGCTGAAGGCAGCGAGAAGCAGCGGCCAACTCAACTTGGCGGGAAGGAACCTCGGGGAAGGATCTTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200540.2 |
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| CDS TCA 72 bp | TTATTGCTGGAGATGATGAGTTTGGTCAGATCTGTCTaGTCCCACCATCGTTCAGTAGAACTGAATGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LLLEMMSLVRSV*SHHRSVELNER Trigger: TCTTTCATTCAGTTCTACTGAACGATGGTGGGATCAGACAGATCTGACCAAACTCATCATCTCCAGCAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072080.10 ENSMUST00000123028.2 ENSMUST00000131518.8 ENSMUST00000150525.8 |
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