Pregenerated sensors for LRRC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049939Ensembl transcript IDs: ENSMUST00000062304.7, ENSMUST00000171353.2
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGCTGATTTATGGCCTCCTGTGAATCATTCCCTCTGCTGCTGCTaGTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: NADLWPPVNHSLCCC*SASLPPGPAAPPSG Trigger: GCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAGCAGCAGAGGGAATGATTCACAGGAGGCCATAAATCAGCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR GCA 90 bp | CTGCACAATGCTGATTTATGGCCTCCTGTGAATCATTCCCTCTGCTaGTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCT | + |
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Preference number: 1 (lower is better) Translates to: LHNADLWPPVNHSLC*CCSASLPPGPAAPP Trigger: AGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAGCAGCAGAGGGAATGATTCACAGGAGGCCATAAATCAGCATTGTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR GCA 90 bp | CACAATGCTGATTTATGGCCTCCTGTGAATCATTCCCTCTGCTGCTaGTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: HNADLWPPVNHSLCC*CSASLPPGPAAPPS Trigger: TGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAGCAGCAGAGGGAATGATTCACAGGAGGCCATAAATCAGCATTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR TCA 90 bp | CATTTGATGGAGAGCTACGCCAGCTCCCTTCCTTCCAAGCTGTCTTaGAGCATTGTCAGGGGAGACACATGCCAGTCTGAAGGCACAAAC | + |
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Preference number: 1 (lower is better) Translates to: HLMESYASSLPSKLS*SIVRGDTCQSEGTN Trigger: GTTTGTGCCTTCAGACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGCTGGCGTAGCTCTCCATCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR TCA 90 bp | CCTTGCAGAGTGGGTTATGCCCAACTGCAGGAATCTGGTGCAATGTaGAAGCATTTGATGGAGAGCTACGCCAGCTCCCTTCCTTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: PCRVGYAQLQESGAM*KHLMESYASSLPSK Trigger: CTTGGAAGGAAGGGAGCTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCATAACCCACTCTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR GCA 90 bp | ACACATGCCTTGCAGAGTGGGTTATGCCCAACTGCAGGAATCTGGTaGAATGTGAAAGCATTTGATGGAGAGCTACGCCAGCTCCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: THALQSGLCPTAGIW*NVKAFDGELRQLPS Trigger: GGAAGGGAGCTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCATAACCCACTCTGCAAGGCATGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR TCA 90 bp | TCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTaGTTTATGGCCTCCTGTGAATCATTCCCTCTGCTGCTGCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SFVRYPEQQVATAQC*FMASCESFPLLLLL Trigger: GAGCAGCAGCAGCAGAGGGAATGATTCACAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR GCA 90 bp | GTAACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTaGCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: VTTGGSLGEGSFPQW*PFNRISCPTHLCVP Trigger: GGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR TCA 90 bp | TATAGAAATGGTATTCCTAGATCCTGTAAAGCATCTTCTAAAAATTaGCAGATGCAGGCTATCCTCCCTGCCCCCAGCAGCCCACACCCT | + |
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Preference number: 1 (lower is better) Translates to: YRNGIPRSCKASSKN*QMQAILPAPSSPHP Trigger: AGGGTGTGGGCTGCTGGGGGCAGGGAGGATAGCCTGCATCTGTCAATTTTTAGAAGATGCTTTACAGGATCTAGGAATACCATTTCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR TCA 90 bp | GTCAGTGTTCTTGTAACATCCTGGTTGGCGAAGGCTTCTTTAAATTaGGCCTGTGCCCTTTTTAGCTCTCCTTCCCCTCTCTACTCATGT | + |
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Preference number: 1 (lower is better) Translates to: VSVLVTSWLAKASLN*ACALFSSPSPLYSC Trigger: ACATGAGTAGAGAGGGGAAGGAGAGCTAAAAAGGGCACAGGCTCAATTTAAAGAAGCCTTCGCCAACCAGGATGTTACAAGAACACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CCA 90 bp | GTCATCATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTaGCCACTGCACAATGCTGATTTATGGCCTCCTGTGAATCATTCC | + |
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Preference number: 1 (lower is better) Translates to: VIIVYNHLSDTRNNR*PLHNADLWPPVNHS Trigger: GGAATGATTCACAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAATGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTACATGCCTTGCAGAGTaGGTTATGCCCAACTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPTCLAE*VMPNCR Trigger: CCTGCAGTTGGGCATAACCCACTCTGCAAGGCATGT...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTCCAACTGCAGGAATCTaGTGCAATGTGAAAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPPTAGI*CNVKAF Trigger: AAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CAA 90 bp | TGGAGAGCTACGCCAGCTCCCTTCCTTCCAAGCTGTCTTGAAGCATaGTCAGGGGAGACACATGCCAGTCTGAAGGCACAAACCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: WRATPAPFLPSCLEA*SGETHASLKAQTQR Trigger: CCTCTGGGTTTGTGCCTTCAGACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGCTGGCGTAGCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTCAGCAGCCCACACCCTaGCACTTTAGGGGTGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: APFLPSCLEALSGETHASQQPTP*HFRGVG Trigger: ACCAACACCCCTAAAGTGGCAGGGTGTGGGCTGCTG...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTTCCTACCCACAACATTaGCAAGAACCCCTTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: APFLPSCLEALSGETHASSYPQH*QEPLPS Trigger: GGAGGGAAGGGGTTCTTGGCAATGTTGTGGGTAGGA...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGTTGCAGAGTGGGTTATaGCCAACTGCAGGAATCTGG | + |
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Preference number: 2 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLLQSGL*PTAGIW Trigger: CCAGATTCCTGCAGTTGGGCATAACCCACTCTGCAA...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR TCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGCAATGTGAAAGCATTTaGTGGAGAGCTACGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLQCESI*WRATPA Trigger: AGCTGGCGTAGCTCTCCATCAAATGCTTTCACATTG...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | CACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTTGGTGGTTTTGCAGGCTATCCTCCCTaGCCCCAGCAGCCCACACCC | + |
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Preference number: 2 (lower is better) Translates to: HTYKETTSGRISWNFGGFAGYPP*PQQPTP Trigger: GGGTGTGGGCTGCTGGGGGCAGGGAGGATAGCCTGC...AAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CAA 90 bp | GTCAGGGGAGACACATGCCAGTCTGAAGGCACAAACCCAGAGGATTaGCGCACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VRGDTCQSEGTNPED*RTRTKKQPLEGLVG Trigger: TCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTGCGCAAATCCTCTGGGTTTGTGCCTTCAGACTGGCATGTGTCTCCCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACACTGCAGGAATCTGGTaGAATGTGAAAGCATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNTAGIW*NVKAFD Trigger: ATCAAATGCTTTCACATTGCACCAGATTCCTGCAGT...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGAATAGACACATGCCTTaGAGAGTGGGTTATGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLNRHMP*RVGYAQ Trigger: TTGGGCATAACCCACTCTGCAAGGCATGTGTCTATT...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATTCCCTCTGCTGCTGCTaGTCTGCTTCCCTTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNSLCCC*SASLPP Trigger: AGGAGGAAGGGAAGCAGAGCAGCAGCAGCAGAGGGA...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CCA 90 bp | AAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGTGTCTTGTGAAGTTGTaGGGCTCCATAGGTGACCAT | + |
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Preference number: 2 (lower is better) Translates to: KITTVPTRAMCACPRGSQCLVKL*GSIGDH Trigger: ATGGTCACCTATGGAGCCCCACAACTTCACAAGACA...CTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATCCTCCCGGGAAACCCTaGATAGACACATGCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNPPGKP*IDTCLA Trigger: TGCAAGGCATGTGTCTATTCAGGGTTTCCCGGGAGG...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGCATTCCCTCTGCTGCTaGTGCTCTGCTTCCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: NGAHSTEFHAQLICVFPLHSLCC*CSASLP Trigger: AGGAAGGGAAGCAGAGCAGCAGCAGCAGAGGGAATG...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGGTGAATCATTCCCTCTaGTGCTGCTGCTCTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWVNHSL*CCCSAS Trigger: GGAAGCAGAGCAGCAGCAGCAGAGGGAATGATTCAC...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CCA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACTCTGGAAGGATTAGTTaGAATTTTGGTGGTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNSGRIS*NFGGFP Trigger: AGGAAAACCACCAAAATTCCAACTAATCCTTCCAGA...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CAA 90 bp | CTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTTTACTaGTTTCTTTCACATATTGACAGGAAGCAGGTAAGTTTGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LLGRCVHAHVALRVY*FLSHIDRKQVSLSC Trigger: ACAAGACAAACTTACCTGCTTCCTGTCAATATGTGAAAGAAACAAGTAAACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
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| 3UTR-3UTR GCA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGTGGGTTATGCCCAACTaGAGGAATCTGGTGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWWVMPN*RNLVQC Trigger: ACATTGCACCAGATTCCTGCAGTTGGGCATAACCCA...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR GCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGCAAACCCAGAGGATTTaGGCACACGTACAAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: NGAHSTEFHAQLICVFPLQTQRI*AHVQRN Trigger: GTTTCTTTGTACGTGTGCGCAAATCCTCTGGGTTTG...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATTCACCGCTCAACCTTTaGGCACAGTACAAATTTGTG | + |
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Preference number: 2 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNSPLNL*AQYKFV Trigger: CACAAATTTGTACTGTGCCCAAAGGTTGAGCGGTGA...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGCACAATGCTGATTTATaGCCTCCTGTGAATCATTCC | + |
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Preference number: 2 (lower is better) Translates to: NGAHSTEFHAQLICVFPLHNADL*PPVNHS Trigger: GGAATGATTCACAGGAGGCCATAAATCAGCATTGTG...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGGTTCTTGTAACATCCTaGTTGGCGAAGGCTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NGAHSTEFHAQLICVFPLVLVTS*LAKASL Trigger: TAAAGAAGCCTTCGCCAACCAGGATGTTACAAGAAC...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CAA 90 bp | CGCACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTaGGTGGTTTTCCTACTTAAAATACATTTACAGATCTATCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: RTRTKKQPLEGLVGI*VVFLLKIHLQIYLP Trigger: GGGAAGATAGATCTGTAAATGTATTTTAAGTAGGAAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR TCA 72 bp | ACCCCCTTCAGGCCGCCTCCTCCTCCCGGGAAACCCTaGATAGACACATGCCTTGCAGAGTGGGTTATGCCC | + |
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Preference number: 3 (lower is better) Translates to: TPFRPPPPPGKP*IDTCLAEWVMP Trigger: GGGCATAACCCACTCTGCAAGGCATGTGTCTATTCAGGGTTTCCCGGGAGGAGGAGGCGGCCTGAAGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CCA 72 bp | CGGAACAACAGGTGGCCACTGCACAATGCTGATTTATaGCCTCCTGTGAATCATTCCCTCTGCTGCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: RNNRWPLHNADL*PPVNHSLCCCC Trigger: GCAGCAGCAGCAGAGGGAATGATTCACAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR TCA 72 bp | GTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTCTaGAGGCACAAACCCAGAGGATTTGCGCACACGTAC | + |
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Preference number: 3 (lower is better) Translates to: VLKHCQGRHMPV*RHKPRGFAHTY Trigger: GTACGTGTGCGCAAATCCTCTGGGTTTGTGCCTTCAGACTGGCATGTGTCTCCCCTGACAATGCTTCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR GCA 72 bp | GGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTaGCCATTCAACAGAATTTCATGCCCAACTCATTTG | + |
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Preference number: 3 (lower is better) Translates to: GGSLGEGSFPQW*PFNRISCPTHL Trigger: CAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CCA 72 bp | ACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATaGTGCCCATTCAACAGAATTTCATGCCCAACTCAT | + |
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Preference number: 3 (lower is better) Translates to: TGGSLGEGSFPQ*CPFNRISCPTH Trigger: ATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CAA 90 bp | TTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTTGTTTGTCTTGTGAAGTaGTGGGGCTCCATAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: LLLFLLGRCVHAHVALRVVCLVK*WGSIGD Trigger: GTCACCTATGGAGCCCCACAACTTCACAAGACAAAC...AACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
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| 3UTR TCA 72 bp | AGATACCCGGAACAACAGGTGGCCACTGCACAATGCTaGTTTATGGCCTCCTGTGAATCATTCCCTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: RYPEQQVATAQC*FMASCESFPLL Trigger: CAGCAGAGGGAATGATTCACAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR GCA 72 bp | CTAGATCCTGTAAAGCATCTTCTAAAAATTGACAGATaGAGGCTATCCTCCCTGCCCCCAGCAGCCCACACC | + |
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Preference number: 3 (lower is better) Translates to: LDPVKHLLKIDR*RLSSLPPAAHT Trigger: GGTGTGGGCTGCTGGGGGCAGGGAGGATAGCCTGCATCTGTCAATTTTTAGAAGATGCTTTACAGGATCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR-3UTR CAA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGTCCTTCCAAGCTGTCTaGAAGCATTGTCAGGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: PTAGIWCNVKAFDGELRQSFQAV*KHCQGR Trigger: TCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGA...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR GCA 72 bp | TTGCAGAGTGGGTTATGCCCAACTGCAGGAATCTGGTaGAATGTGAAAGCATTTGATGGAGAGCTACGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LQSGLCPTAGIW*NVKAFDGELRQ Trigger: CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCATAACCCACTCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR TCA 72 bp | CTTGTAACATCCTGGTTGGCGAAGGCTTCTTTAAATTaGGCCTGTGCCCTTTTTAGCTCTCCTTCCCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: LVTSWLAKASLN*ACALFSSPSPL Trigger: GAGAGGGGAAGGAGAGCTAAAAAGGGCACAGGCTCAATTTAAAGAAGCCTTCGCCAACCAGGATGTTACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CCA 72 bp | GTCTACAATCATTTGTCAGATACCCGGAACAACAGGTaGCCACTGCACAATGCTGATTTATGGCCTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VYNHLSDTRNNR*PLHNADLWPPV Trigger: CACAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR GCA 72 bp | AGCTTCCCCCAATGGTGCCCATTCAACAGAATTTCATaGCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SFPQWCPFNRIS*PTHLCVPLVSV Trigger: AACACTGACAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATTGGGGGAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| 3UTR GCA 72 bp | AAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATaGCCACGTGGCTCTCAGGGTTTACTTGTTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KITTVPTRAMCA*PRGSQGLLVSF Trigger: GAAAGAAACAAGTAAACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGATTGTCTACAATCATTaGTCAGATACCCGGAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWIVYNH*SDTRNN Trigger: GTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGTAAACTAAGTAAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCAGGAAGCAGGTAAGTTaGTCTTGTGAAGTTGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSKLSKITTVPTRAMCACRKQVS*SCEVVG Trigger: CCCCACAACTTCACAAGACAAACTTACCTGCTTCCT...GCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTTACTTAGTTTACTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| 3UTR CCA 72 bp | AATATAGTACCAAGGGACTCAGGCCATTACCATATGTaGCTTCAAAGACTTAGATGGGGCTGTCTAAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: NIVPRDSGHYHM*LQRLRWGCLNG Trigger: TCCATTTAGACAGCCCCATCTAAGTCTTTGAAGCCACATATGGTAATGGCCTGAGTCCCTTGGTACTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| 3UTR CCA 72 bp | TCAGGCCATTACCATATGTGGCTTCAAAGACTTAGATaGGGCTGTCTAAATGGAGATGTGCTATATATACAA | + |
|
Preference number: 3 (lower is better) Translates to: SGHYHMWLQRLR*GCLNGDVLYIQ Trigger: TTGTATATATAGCACATCTCCATTTAGACAGCCCCATCTAAGTCTTTGAAGCCACATATGGTAATGGCCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTGTTTTGGGGCCCGGCTaGAGCGGCAGCAGCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPVLGPG*SGSSDG Trigger: GCCATCGCTGCTGCCGCTTCAGCCGGGCCCCAAAAC...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTACGGAGGGGCAGTTTTaGGGCCCGGCTGAAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPTEGQF*GPAEAA Trigger: TGCCGCTTCAGCCGGGCCCCAAAACTGCCCCTCCGT...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTGTGGTGACTGTGGGGTaGAGAGAGTTCCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPVVTVG*REFPRL Trigger: CAGCCTGGGGAACTCTCTGCACCCCACAGTCACCAC...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTAGGGAGCTTAGGCCATaGAAGGACCCAGGCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPRELRP*KDPGLI Trigger: GATCAGGCCTGGGTCCTTCCATGGCCTAAGCTCCCT...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTCCGAGGCATTGGAGTTaGCTGCCACATTGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPPRHWS*LPHWSP Trigger: TGGTGACCAATGTGGCAGGCAACTCCAATGCCTCGG...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTCTGTTTTCTGTCCAGTaGGCCCCATGTGCTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPLFSVQ*APCAGL Trigger: CAAACCAGCACATGGGGCCCACTGGACAGAAAACAG...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | TTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTTGAGGGTACTGGCACCTaGTTGGGCACACGGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLLGRCVHAHVALRVEGTGT*LGTRVV Trigger: GACCACCCGTGTGCCCAAGCAGGTGCCAGTACCCTC...AACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR GCA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACGTGACTGTACTCCGCTaGTGGTGCCGCTTGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNVTVLR*WCRLRS Trigger: ACTTCGCAAGCGGCACCAGCAGCGGAGTACAGTCAC...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGGGACGGAGCTGCTGTTaGTGCTGCAGGTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLGRSCC*CCRCCC Trigger: GCAGCAGCACCTGCAGCAGCAACAGCAGCTCCGTCC...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACGGAAGGAATACCCTGTaGGACCTCAGAGAGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNGRNTL*DLRESP Trigger: CGGGGACTCTCTGAGGTCCCACAGGGTATTCCTTCC...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTGGCCTCGCATGTGCATaGGAGCATGACAGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASGLACA*EHDSGH Trigger: GTGGCCGCTGTCATGCTCCCATGCACATGCGAGGCC...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGGGCACACGGGTGGTCTaGATGAGCACCGTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLGTRVV*MSTVVE Trigger: CTCTACCACGGTGCTCATTCAGACCACCCGTGTGCC...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACGGCAGCAGCGATGGCTaGACACAGAATCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNGSSDG*TQNPHL Trigger: CAAGTGTGGATTCTGTGTGCAGCCATCGCTGCTGCC...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CACCTTACAGCAGTTGACTTGAGGCTCCTACCCACAACATTGCCAAGAACCCCTTCCACACTTGCGCCGTaGGGTAGACGACGGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLTAVDLRLLPTTLPRTPSTLAP*GRRREA Trigger: TGCTTCCCGTCGTCTACCTCACGGCGCAAGTGTGGA...AGGGGTTCTTGGCAATGTTGTGGGTAGGAGCCTCAAGTCAACTGCTGTAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGCCACCTCTATCTGCCTaGTGGAGTTCCTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLPPLSA*WSSCPA Trigger: AGCTGGGCAGGAACTCCATCAGGCAGATAGAGGTGG...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGGCCGGGAGGCGTGGCTaGGCACTGTCCCATTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWAGRRG*ALSHWA Trigger: TGCCCAATGGGACAGTGCTCAGCCACGCCTCCCGGC...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCGGCCGAGCTCACATTaGGGTAGGCCGAGGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRRPSSH*GRPRHW Trigger: CCAATGCCTCGGCCTACCTCAATGTGAGCTCGGCCG...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | TTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTTGGTGGTCAGCAGAGATaGTGCCTGATACACCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLLGRCVHAHVALRVGGQQR*CLIHRT Trigger: CGTCCGGTGTATCAGGCATCATCTCTGCTGACCACC...AACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCGAGGGTACTGGCACCTaGTTGGGCACACGGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELREGTGT*LGTRVV Trigger: GACCACCCGTGTGCCCAAGCAGGTGCCAGTACCCTC...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | ATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTGTGACTGTACTCCGCTaGTGGTGCCGCTTGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITTVPTRAMCACPRGSQGVTVLR*WCRLRS Trigger: ACTTCGCAAGCGGCACCAGCAGCGGAGTACAGTCAC...ACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCGGATGCCGGGAGGCGTaGCTGAGCACTGTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRGCREA*LSTVPL Trigger: CAATGGGACAGTGCTCAGCCACGCCTCCCGGCATCC...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGGGTAGGCCGAGGCATTaGAGTTGCCTGCCACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLGRPRH*SCLPHW Trigger: CCAATGTGGCAGGCAACTCCAATGCCTCGGCCTACC...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | TTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTTGTACTGGCACCTGCTTaGGCACACGGGTGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLLGRCVHAHVALRVVLAPA*AHGWSE Trigger: TTCAGACCACCCGTGTGCCCAAGCAGGTGCCAGTAC...AACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | ATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTATCTGTGGAGGGTACTaGCACCTGCTTGGGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: ITTVPTRAMCACPRGSQGICGGY*HLLGHT Trigger: CGTGTGCCCAAGCAGGTGCCAGTACCCTCCACAGAT...ACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCGACTGGCGAGGCCATTaGAGGCCCCCACCTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRDWRGH*RPPPLS Trigger: AGATAGAGGTGGGGGCCTTCAATGGCCTCGCCAGTC...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGAGGCCCCACTGGGGATaGCTGTCAGCCAGTTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PTAGIWCNVKAFDGELRQRPHWG*LSASCR Trigger: TCGACAACTGGCTGACAGTCATCCCCAGTGGGGCCT...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CACCTTACAGCAGTTGACTTGAGGCTCCTACCCACAACATTGCCAAGAACCCCTGGAAGGACCCAGGCCTaGTCTCAGGAAAGTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLTAVDLRLLPTTLPRTPGRTQA*SQESGS Trigger: GGAACCACTTTCCTGAGATCAGGCCTGGGTCCTTCC...AGGGGTTCTTGGCAATGTTGTGGGTAGGAGCCTCAAGTCAACTGCTGTAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGTCCGCTCAATCAGGCTaGCCTGTGAGTTCATCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLSAQSG*PVSSSP Trigger: GGGTGATGAACTCACAGGTCAGCCTGATTGAGCGGA...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTATTGAGGTCCCGGGGTaGATCCATGATGAAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASIEVPG*IHDERG Trigger: GCCCCTTTCATCATGGATGCACCCCGGGACCTCAAT...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | TTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTTCCGAGGCATTGGAGTTaGCTGCCACATTGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLLGRCVHAHVALRVPRHWS*LPHWSP Trigger: TGGTGACCAATGTGGCAGGCAACTCCAATGCCTCGG...AACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR TCA 90 bp | CACCTTACAGCAGTTGACTTGAGGCTCCTACCCACAACATTGCCAAGAACCCCTGGTATCTCAGGGGTGTaGAGAGGTCATGGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLTAVDLRLLPTTLPRTPGISGV*RGHGAK Trigger: CTTTGCCCCATGACCTCTTCACACCCCTGAGATACC...AGGGGTTCTTGGCAATGTTGTGGGTAGGAGCCTCAAGTCAACTGCTGTAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTCCAGTGGGCCCCATGTaGTGGTTTGTAGGTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASPVGPM*WFVGVV Trigger: TACAACACCTACAAACCAGCACATGGGGCCCACTGG...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACAAGGGATGCTCTCAATaGGATTGTTTCGCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNKGCSQ*DCFAAR Trigger: TCTGGCTGCGAAACAATCCCATTGAGAGCATCCCTT...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCCGGCTGGTAACCAGTaGATGTGGTGGGAACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRPAGNQ*MWWEQA Trigger: AGCCTGTTCCCACCACATCCACTGGTTACCAGCCGG...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | ATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTACTGTACTCCGCTGCTaGTGCCGCTTGCGAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ITTVPTRAMCACPRGSQGTVLRC*CRLRSL Trigger: TAAACTTCGCAAGCGGCACCAGCAGCGGAGTACAGT...ACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR TCA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGATGTGCATGGGAGCATaGCAGCGGCCACAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWMCMGA*QRPQQV Trigger: CACCTGCTGTGGCCGCTGTCATGCTCCCATGCACAT...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGCTGTCCTGGCAGCTGTaGCTGTACTCCGCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWLSWQL*LYSAAG Trigger: ACCAGCAGCGGAGTACAGTCACAGCTGCCAGGACAG...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGTACTGCCCCCTCACCTaGTACACCGGACGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGAHSTEFHAQLICVFPLYCPLT*YTGRSC Trigger: GCAGCTCCGTCCGGTGTATCAGGTGAGGGGGCAGTA...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTAGAGGTGGTATATaGCGGCTGGTAACCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KITTVPTRAMCACPRGSQGRGGI*RLVTSG Trigger: TCCACTGGTTACCAGCCGGCATATACCACCTCTACC...CTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCTGCTGCTGCAGGTGCTaGTGCTGGGATGTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRCCCRC*CWDVFI Trigger: GATGAAGACATCCCAGCAGCAGCACCTGCAGCAGCA...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTGCAGGTGGAATTGGTTaGGATATACTCCCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASAGGIG*DILPKP Trigger: TGGCTTCGGGAGTATATCCCAACCAATTCCACCTGC...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGGTGGGCCCCATGTGCTaGTTTGTAGGTGTTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLVGPMC*FVGVVV Trigger: AACTACAACACCTACAAACCAGCACATGGGGCCCAC...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGTGCACACCACCTTGCTaGACTGGTTACTGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PTAGIWCNVKAFDGELRQCTPPC*TGYCRN Trigger: GTTCCTGCAGTAACCAGTTCAGCAAGGTGGTGTGCA...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTAATCAGGCTGACCTGTaGGTTCATCACCCACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASNQADL*VHHPQF Trigger: AAACTGTGGGTGATGAACTCACAGGTCAGCCTGATT...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | TCACATATTGACAGGAAGCAGGTAAGTTTGTCTTGTGAAGTTGTGGGGCTCCATCTGTCCTGGCAGCTGTaGCTGTACTCCGCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHIDRKQVSLSCEVVGLHLSWQL*LYSAAG Trigger: ACCAGCAGCGGAGTACAGTCACAGCTGCCAGGACAG...ATGGAGCCCCACAACTTCACAAGACAAACTTACCTGCTTCCTGTCAATATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR GCA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGGGCATTGGAGTTGCCTaGCACATTGGTCACCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTAGIWCNVKAFDGELRQGIGVA*HIGHHA Trigger: TGCATGGTGACCAATGTGGCAGGCAACTCCAATGCC...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCGGTAGAGGTGGTATATaGCGGCTGGTAACCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRGRGGI*RLVTSG Trigger: TCCACTGGTTACCAGCCGGCATATACCACCTCTACC...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | ATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTTCATCCAGGCTGGTCTaGATCTTGTCAGTGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: ITTVPTRAMCACPRGSQGSSRLV*ILSVVS Trigger: AGATACCACTGACAAGATGCAGACCAGCCTGGATGA...ACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | AAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGAACCAGTGGATGTGGTaGGAACAGGCTTGTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KITTVPTRAMCACPRGSQNQWMW*EQACTS Trigger: GGAAGTACAAGCCTGTTCCCACCACATCCACTGGTT...CTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTAAACTAAGTAAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCGGCCGAGCTCACATTaGGGTAGGCCGAGGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSKLSKITTVPTRAMCACRPSSH*GRPRHW Trigger: CCAATGCCTCGGCCTACCTCAATGTGAGCTCGGCCG...GCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTTACTTAGTTTACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCTCTTGGTGGTCTTCATaGCTTCATCCAGGCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRSWWSS*LHPGWS Trigger: AGACCAGCCTGGATGAAGTCATGAAGACCACCAAGA...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCGGATTGTGGTGTAGGTaGAACTCCACCAGGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRGLWCR*NSTRYL Trigger: GAGATACCTGGTGGAGTTGCACCTACACCACAATCC...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTCCACATTGGTCACCATaGATGTGTATACTCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASPHWSP*MCILQC Trigger: ACACTGGAGTATACACATGCATGGTGACCAATGTGG...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGCTGCTGGTGCCGCTTaGGAAGTTTATAGAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KITTVPTRAMCACPRGSQAAGAA*EVYRRQ Trigger: TTGTCTTCTATAAACTTCGCAAGCGGCACCAGCAGC...CTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTAAACTAAGTAAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCGGACGGAGCTGCTGTTaGTGCTGCAGGTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSKLSKITTVPTRAMCACGRSCC*CCRCCC Trigger: GCAGCAGCACCTGCAGCAGCAACAGCAGCTCCGTCC...GCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTTACTTAGTTTACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTACAGCAGTTGACTTGAGGCTCCTACCCACAACATTGCCAAGAACCCCTGGTGTGAAGAGGTCATaGGGCAAAGATGAGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HLTAVDLRLLPTTLPRTPGVKRS*GKDERL Trigger: TAACCTCTCATCTTTGCCCCATGACCTCTTCACACC...AGGGGTTCTTGGCAATGTTGTGGGTAGGAGCCTCAAGTCAACTGCTGTAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGTTCCAAGGATTGTaGTGTAGGTGCAACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRQFQGL*CRCNST Trigger: GGTGGAGTTGCACCTACACCACAATCCTTGGAACTG...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTCAGGTGATATCTCTGTaGTTTCCACTGTTACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASQVISL*FPLLQW Trigger: CCACTGTAACAGTGGAAACCACAGAGATATCACCTG...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | ATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTCAGGTGATATCTCTGTaGTTTCCACTGTTACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITTVPTRAMCACPRGSQGQVISL*FPLLQW Trigger: CCACTGTAACAGTGGAAACCACAGAGATATCACCTG...ACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | TCACATATTGACAGGAAGCAGGTAAGTTTGTCTTGTGAAGTTGTGGGGCTCCATCCGGCTGGTAACCAGTaGATGTGGTGGGAACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHIDRKQVSLSCEVVGLHPAGNQ*MWWEQA Trigger: AGCCTGTTCCCACCACATCCACTGGTTACCAGCCGG...ATGGAGCCCCACAACTTCACAAGACAAACTTACCTGCTTCCTGTCAATATGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATGTACTGGCACCTGCTTaGGCACACGGGTGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNVLAPA*AHGWSE Trigger: TTCAGACCACCCGTGTGCCCAAGCAGGTGCCAGTAC...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATATCTGTGGAGGGTACTaGCACCTGCTTGGGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNICGGY*HLLGHT Trigger: CGTGTGCCCAAGCAGGTGCCAGTACCCTCCACAGAT...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | AAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGTCTGCATCTTGTCAGTaGTATCTGTGGAGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KITTVPTRAMCACPRGSQSASCQ*YLWRVL Trigger: CAGTACCCTCCACAGATACCACTGACAAGATGCAGA...CTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCTGAAGGTGTCGGCCTaGATCATCTGGATGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPTAGIWCNVKAFDGELRLKVSA*IIWMLF Trigger: AAACAACATCCAGATGATTCAGGCCGACACCTTCAG...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | TTGAGTAAACTAAGTAAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCGGCACACGGGTGGTCTaGATGAGCACCGTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSKLSKITTVPTRAMCACGTRVV*MSTVVE Trigger: CTCTACCACGGTGCTCATTCAGACCACCCGTGTGCC...GCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTTACTTAGTTTACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATACGGCATTCCAGGTGTaGTGCACAGTTACCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNTAFQV*CTVTCH Trigger: GTGGCAGGTAACTGTGCACCACACCTGGAATGCCGT...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATAAGCGGCAGCAGCGATaGCTGCACACAGAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNKRQQR*LHTEST Trigger: TGTGGATTCTGTGTGCAGCCATCGCTGCTGCCGCTT...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGCACAGCAGGTGGAATTaGTTGGGATATACTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTAGIWCNVKAFDGELRQHSRWN*LGYTPE Trigger: TTCGGGAGTATATCCCAACCAATTCCACCTGCTGTG...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGACTGTACTCCGCTGCTaGTGCCGCTTGCGAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWTVLRC*CRLRSL Trigger: TAAACTTCGCAAGCGGCACCAGCAGCGGAGTACAGT...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTATGTCTTCATCCACCTaGATAATCTCTACTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASMSSST*IISTVL Trigger: CAGGACAGTAGAGATTATCCAGGTGGATGAAGACAT...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGTATGGTCATGTATTGTaGGCAACACTACTGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTAGIWCNVKAFDGELRQYGHVL*ATLLPP Trigger: AGGGGGCAGTAGTGTTGCCCACAATACATGACCATA...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTTGGTGGTTTTGGGAGGGCACCCGGTTaGAGGCATAAGAAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HTYKETTSGRISWNFGGFGRAPG*RHKKGC Trigger: GCATCCCTTCTTATGCCTTCAACCGGGTGCCCTCCC...AAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR GCA 90 bp | CACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTTGGTGGTTTTGCCCCCACCTCTATCTaGCTGATGGAGTTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTYKETTSGRISWNFGGFAPTSI*LMEFLP Trigger: GGGCAGGAACTCCATCAGGCAGATAGAGGTGGGGGC...AAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | TTGAGTAAACTAAGTAAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCGGTAGGCCGAGGCATTaGAGTTGCCTGCCACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSKLSKITTVPTRAMCACGRPRH*SCLPHW Trigger: CCAATGTGGCAGGCAACTCCAATGCCTCGGCCTACC...GCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTTACTTAGTTTACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGAACCAGTGGATGTGGTaGGAACAGGCTTGTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWNQWMW*EQACTS Trigger: GGAAGTACAAGCCTGTTCCCACCACATCCACTGGTT...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGGGTAACCAGTGGATGTaGTGGGAACAGGCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWGNQWM*WEQACT Trigger: AGTACAAGCCTGTTCCCACCACATCCACTGGTTACC...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | AAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGATGTCTTCATCCACCTaGATAATCTCTACTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KITTVPTRAMCACPRGSQMSSST*IISTVL Trigger: CAGGACAGTAGAGATTATCCAGGTGGATGAAGACAT...CTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTCCTGTACCTTGTCCTTaGTATGGGTCTGAATTATAT | + |
|
Preference number: 4 (lower is better) Translates to: APFLPSCLEALSGETHASPVPCP*YGSELY Trigger: ATATAATTCAGACCCATACCAAGGACAAGGTACAGG...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGTATACTCCAGCTTCTTaGGTTCCCCCAAGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NGAHSTEFHAQLICVFPLYTPAS*VPPSPD Trigger: GTCTGGACTTGGGGGAACTCAAGAAGCTGGAGTATA...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATTATTGTGGGCTAAGTTaGGTTCCACGAGGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNYCGLS*VPRGKP Trigger: TGGCTTCCCTCGTGGAACTCAACTTAGCCCACAATA...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | TCACATATTGACAGGAAGCAGGTAAGTTTGTCTTGTGAAGTTGTGGGGCTCCATTCTTGGTGGTCTTCATaGCTTCATCCAGGCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHIDRKQVSLSCEVVGLHSWWSS*LHPGWS Trigger: AGACCAGCCTGGATGAAGTCATGAAGACCACCAAGA...ATGGAGCCCCACAACTTCACAAGACAAACTTACCTGCTTCCTGTCAATATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTAAACTAAGTAAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCTGCTGCTGCAGGTGCTaGTGCTGGGATGTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSKLSKITTVPTRAMCACCCCRC*CWDVFI Trigger: GATGAAGACATCCCAGCAGCAGCACCTGCAGCAGCA...GCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTTACTTAGTTTACTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | TCACATATTGACAGGAAGCAGGTAAGTTTGTCTTGTGAAGTTGTGGGGCTCCATGGTAACCAGTGGATGTaGTGGGAACAGGCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SHIDRKQVSLSCEVVGLHGNQWM*WEQACT Trigger: AGTACAAGCCTGTTCCCACCACATCCACTGGTTACC...ATGGAGCCCCACAACTTCACAAGACAAACTTACCTGCTTCCTGTCAATATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGTCATCCAGGCTGGTCTaGATCTTGTCAGTGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: NGAHSTEFHAQLICVFPLSSRLV*ILSVVS Trigger: AGATACCACTGACAAGATGCAGACCAGCCTGGATGA...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGCTGATCTCAGGAAAGTaGTTCCCTGACATCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGAHSTEFHAQLICVFPLLISGK*FPDISS Trigger: GCTTGAGATGTCAGGGAACCACTTTCCTGAGATCAG...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR TCA 90 bp | CACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTTGGTGGTTTTAGGAAAGTGGTTCCCTaGCATCTCAAGCTCCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTYKETTSGRISWNFGGFRKVVP*HLKLLE Trigger: CTCGAGGAGCTTGAGATGTCAGGGAACCACTTTCCT...AAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CCA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGGATGAGAGGTTATTGTaGGCTAAGTTGAGTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: NGAHSTEFHAQLICVFPLDERLL*AKLSST Trigger: CGTGGAACTCAACTTAGCCCACAATAACCTCTCATC...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| 3UTR CAA 72 bp | TGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTaGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: WCPFNRISCPTH*CVPLVSVLVTS Trigger: GGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR GCA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATAGGCATAAGAAGGGATaGTCTCAATGGGATTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNRHKKG*SQWDCF Trigger: GAAACAATCCCATTGAGAGCATCCCTTCTTATGCCT...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CCA 90 bp | CACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTTGGTGGTTTTAGCGGCCACAGCAGGTaGAATTGGTTGGGATATACT | + |
|
Preference number: 4 (lower is better) Translates to: HTYKETTSGRISWNFGGFSGHSR*NWLGYT Trigger: AGTATATCCCAACCAATTCCACCTGCTGTGGCCGCT...AAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR GCA 90 bp | CACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTTGGTGGTTTTGCTGCTGGTGCCGCTTaGGAAGTTTATAGAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: HTYKETTSGRISWNFGGFAAGAA*EVYRRQ Trigger: TTGTCTTCTATAAACTTCGCAAGCGGCACCAGCAGC...AAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CCA 90 bp | CACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTTGGTGGTTTTTCTGCATCTTGTCAGTaGTATCTGTGGAGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: HTYKETTSGRISWNFGGFSASCQ*YLWRVL Trigger: CAGTACCCTCCACAGATACCACTGACAAGATGCAGA...AAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CCA 90 bp | TTGAGTAAACTAAGTAAGATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCAGAAGACAATCAACATaGCAGCAGCTAGGAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKLSKITTVPTRAMCACRRQST*QQLGES Trigger: TGACTCTCCTAGCTGCTGCCATGTTGATTGTCTTCT...GCATGCACACATCGCCCTAGTAGGAACAGTAGTAATCTTACTTAGTTTACTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS-3UTR CCA 90 bp | CACACGTACAAAGAAACAACCTCTGGAAGGATTAGTTGGAATTTTGGTGGTTTTAGAAGACAATCAACATaGCAGCAGCTAGGAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTYKETTSGRISWNFGGFRRQST*QQLGES Trigger: TGACTCTCCTAGCTGCTGCCATGTTGATTGTCTTCT...AAAACCACCAAAATTCCAACTAATCCTTCCAGAGGTTGTTTCTTTGTACGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | CTGCTGCTCTGCTTCCCTTCCTCCTGGGCCGGCCGCACCCCCTTCAGGCCGCCTTTCAGGTACTTGAGGTaGAACAGCCCCTCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLCFPSSWAGRTPFRPPFRYLR*NSPSKA Trigger: GGCTTTTGAGGGGCTGTTCAACCTCAAGTACCTGAA...AGGCGGCCTGAAGGGGGTGCGGCCGGCCCAGGAGGAAGGGAAGCAGAGCAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS TCA 90 bp | AAGCGGCAGCAGCGATGGCTGCACACAGAATCCACACTTGCGCCGTaGGGTAGACGACGGGAAGCAGGACGGCATTCCAGGTGTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KRQQRWLHTESTLAP*GRRREAGRHSRCGA Trigger: TGCACCACACCTGGAATGCCGTCCTGCTTCCCGTCGTCTACCTCACGGCGCAAGTGTGGATTCTGTGTGCAGCCATCGCTGCTGCCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS CCA 90 bp | AGCGGCCTCGCATGTGCATGGGAGCATGACAGCGGCCACAGCAGGTaGAATTGGTTGGGATATACTCCCGAAGCCACCAAGCCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGLACAWEHDSGHSR*NWLGYTPEATKPAT Trigger: TGTGGCTGGCTTGGTGGCTTCGGGAGTATATCCCAACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGCGAGGCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS CCA 90 bp | AGGCAGCCTGGTCCACCTCTACCAGGTAGCGGCCTCGCATGTGCATaGGAGCATGACAGCGGCCACAGCAGGTGGAATTGGTTGGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: RQPGPPLPGSGLACA*EHDSGHSRWNWLGY Trigger: ATATCCCAACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGCGAGGCCGCTACCTGGTAGAGGTGGACCAGGCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS CCA 90 bp | AGGGAGCTTAGGCCATGGAAGGACCCAGGCCTGATCTCAGGAAAGTaGTTCCCTGACATCTCAAGCTCCTCGAGCCCCACCAGGGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RELRPWKDPGLISGK*FPDISSSSSPTRGV Trigger: TACACCCCTGGTGGGGCTCGAGGAGCTTGAGATGTCAGGGAACCACTTTCCTGAGATCAGGCCTGGGTCCTTCCATGGCCTAAGCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 90 bp | AAGGTGCCATCATTGAGAACAGAGATCCGGGGATGCCGGGAGGCGTaGCTGAGCACTGTCCCATTGGGCAGCAACCACTTCACAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KVPSLRTEIRGCREA*LSTVPLGSNHFTED Trigger: GTCCTCTGTGAAGTGGTTGCTGCCCAATGGGACAGTGCTCAGCCACGCCTCCCGGCATCCCCGGATCTCTGTTCTCAATGATGGCACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS GCA 90 bp | CGAGAAAAGTTCAAGGTGCCATCATTGAGAACAGAGATCCGGGGATaGCGGGAGGCGTGGCTGAGCACTGTCCCATTGGGCAGCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: REKFKVPSLRTEIRG*REAWLSTVPLGSNH Trigger: GTGGTTGCTGCCCAATGGGACAGTGCTCAGCCACGCCTCCCGGCATCCCCGGATCTCTGTTCTCAATGATGGCACCTTGAACTTTTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 90 bp | ATCCAGGCTGGTCTGCATCTTGTCAGTGGTATCTGTGGAGGGTACTaGCACCTGCTTGGGCACACGGGTGGTCTGAATGAGCACCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IQAGLHLVSGICGGY*HLLGHTGGLNEHRG Trigger: ACCACGGTGCTCATTCAGACCACCCGTGTGCCCAAGCAGGTGCCAGTACCCTCCACAGATACCACTGACAAGATGCAGACCAGCCTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS GCA 90 bp | GGGCACACGGGTGGTCTGAATGAGCACCGTGGTAGAGGTGGTATATaGCGGCTGGTAACCAGTGGATGTGGTGGGAACAGGCTTGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: GHTGGLNEHRGRGGI*RLVTSGCGGNRLVL Trigger: AAGTACAAGCCTGTTCCCACCACATCCACTGGTTACCAGCCGGCATATACCACCTCTACCACGGTGCTCATTCAGACCACCCGTGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS-3UTR CAA 90 bp | TTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTTGCCGAGGCATTGGAGTaGCCTGCCACATTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLLGRCVHAHVALRVAEALE*PATLVT Trigger: GGTGACCAATGTGGCAGGCAACTCCAATGCCTCGGC...AACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
||
| CDS GCA 90 bp | CTTCAGTTCTGCCATCCGATCCTCAGAGATATTGAGGTCCCGGGGTaGATCCATGATGAAAGGGGCAGAGCACTGAAAGGCAGCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQFCHPILRDIEVPG*IHDERGRALKGSLV Trigger: GACCAGGCTGCCTTTCAGTGCTCTGCCCCTTTCATCATGGATGCACCCCGGGACCTCAATATCTCTGAGGATCGGATGGCAGAACTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 90 bp | CTCGCATGTGCATGGGAGCATGACAGCGGCCACAGCAGGTGGAATTaGTTGGGATATACTCCCGAAGCCACCAAGCCAGCCACAGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: LACAWEHDSGHSRWN*LGYTPEATKPATEY Trigger: ATATTCTGTGGCTGGCTTGGTGGCTTCGGGAGTATATCCCAACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACAGGCTGGTCTGCATCTaGTCAGTGGTATCTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNRLVCI*SVVSVE Trigger: CTCCACAGATACCACTGACAAGATGCAGACCAGCCT...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS GCA 90 bp | CAACCACTTCACAGAGGACATAGGGGGAGTCCGACACTTCAGTTCTaGCATCCGATCCTCAGAGATATTGAGGTCCCGGGGTGCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QPLHRGHRGSPTLQF*HPILRDIEVPGCIH Trigger: ATGGATGCACCCCGGGACCTCAATATCTCTGAGGATCGGATGGCAGAACTGAAGTGTCGGACTCCCCCTATGTCCTCTGTGAAGTGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 90 bp | CATGTGCATGGGAGCATGACAGCGGCCACAGCAGGTGGAATTGGTTaGGATATACTCCCGAAGCCACCAAGCCAGCCACAGAATATCACA | + |
|
Preference number: 5 (lower is better) Translates to: HVHGSMTAATAGGIG*DILPKPPSQPQNIT Trigger: TGTGATATTCTGTGGCTGGCTTGGTGGCTTCGGGAGTATATCCCAACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | CAGATACCCGGAACAACAGGTGGCCACTGCACAATGCTGATTTATGGCCTCCTGACACAGAATCCACACTaGCGCCGTGAGGTAGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: QIPGTTGGHCTMLIYGLLTQNPH*RREVDD Trigger: GTCGTCTACCTCACGGCGCAAGTGTGGATTCTGTGT...CAGGAGGCCATAAATCAGCATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCAGACTGGCGAGGCCATaGAAGGCCCCCACCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: CPTAGIWCNVKAFDGELRRLARP*KAPTSI Trigger: GATAGAGGTGGGGGCCTTCAATGGCCTCGCCAGTCT...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTCTGAGCACTGTCCCATaGGGCAGCAACCACTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: APFLPSCLEALSGETHASLSTVP*GSNHFT Trigger: TGTGAAGTGGTTGCTGCCCAATGGGACAGTGCTCAG...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACGAGTTGCCTGCCACATaGGTCACCATGCATGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNELPAT*VTMHVY Trigger: ATACACATGCATGGTGACCAATGTGGCAGGCAACTC...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | TGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCGCCGAGGCATTGGAGTaGCCTGCCACATTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: CPTAGIWCNVKAFDGELRAEALE*PATLVT Trigger: GGTGACCAATGTGGCAGGCAACTCCAATGCCTCGGC...GCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | CACCTTACAGCAGTTGACTTGAGGCTCCTACCCACAACATTGCCAAGAACCCCTGTGAAGAAGCTGAAGTaGGGGGTGTTGAGCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLTAVDLRLLPTTLPRTPVKKLK*GVLSSA Trigger: GGCCGAGCTCAACACCCCCAACTTCAGCTTCTTCAC...AGGGGTTCTTGGCAATGTTGTGGGTAGGAGCCTCAAGTCAACTGCTGTAAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | ATTACTACTGTTCCTACTAGGGCGATGTGTGCATGCCCACGTGGCTCTCAGGGTAGGCTGGTCTGCATCTaGTCAGTGGTATCTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ITTVPTRAMCACPRGSQGRLVCI*SVVSVE Trigger: CTCCACAGATACCACTGACAAGATGCAGACCAGCCT...ACCCTGAGAGCCACGTGGGCATGCACACATCGCCCTAGTAGGAACAGTAGTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
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| CDS-3UTR CAA 90 bp | GCTCCCTTCCTTCCAAGCTGTCTTGAAGCATTGTCAGGGGAGACACATGCCAGTTCACAGTTCCAAGGATaGTGGTGTAGGTGCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: APFLPSCLEALSGETHASSQFQG*WCRCNS Trigger: GGAGTTGCACCTACACCACAATCCTTGGAACTGTGA...ACTGGCATGTGTCTCCCCTGACAATGCTTCAAGACAGCTTGGAAGGAAGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | CACCTTACAGCAGTTGACTTGAGGCTCCTACCCACAACATTGCCAAGAACCCCTCCACAGCAGGTGGAATaGGTTGGGATATACTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HLTAVDLRLLPTTLPRTPPQQVE*VGIYSR Trigger: TCGGGAGTATATCCCAACCAATTCCACCTGCTGTGG...AGGGGTTCTTGGCAATGTTGTGGGTAGGAGCCTCAAGTCAACTGCTGTAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | ACTACTGGAGGTAGCCTAGGGGAGGGAAGCTTCCCCCAATGGTGCCCATTCAACAAAGATGAGAGGTTATaGTGGGCTAAGTTGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTGGSLGEGSFPQWCPFNKDERL*WAKLSS Trigger: GGAACTCAACTTAGCCCACAATAACCTCTCATCTTT...GTTGAATGGGCACCATTGGGGGAAGCTTCCCTCCCCTAGGCTACCTCCAGTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGAGCAGGTGGAATTGGTaGGGATATACTCCCGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTAGIWCNVKAFDGELRQSRWNW*GYTPEA Trigger: GGCTTCGGGAGTATATCCCAACCAATTCCACCTGCT...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS TCA 90 bp | AAGGATTGTGGTGTAGGTGCAACTCCACCAGGTATCTCAGGGGTGTaGAGAGGTCATGGGGCAAAGATGAGAGGTTATTGTGGGCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KDCGVGATPPGISGV*RGHGAKMRGYCGLS Trigger: ACTTAGCCCACAATAACCTCTCATCTTTGCCCCATGACCTCTTCACACCCCTGAGATACCTGGTGGAGTTGCACCTACACCACAATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGTTATTGTGGGCTAAGTaGAGTTCCACGAGGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTAGIWCNVKAFDGELRQLLWAK*SSTREA Trigger: GGCTTCCCTCGTGGAACTCAACTTAGCCCACAATAA...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | CCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTTGATGGAGAGCTACGCCAGTTCAAGGTGCCATCATaGAGAACAGAGATCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PTAGIWCNVKAFDGELRQFKVPS*RTEIRG Trigger: TCCCCGGATCTCTGTTCTCAATGATGGCACCTTGAA...CTGGCGTAGCTCTCCATCAAATGCTTTCACATTGCACCAGATTCCTGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS-3UTR CAA 90 bp | TCACATATTGACAGGAAGCAGGTAAGTTTGTCTTGTGAAGTTGTGGGGCTCCATGTGAAGAAGCTGAAGTaGGGGGTGTTGAGCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHIDRKQVSLSCEVVGLHVKKLK*GVLSSA Trigger: GGCCGAGCTCAACACCCCCAACTTCAGCTTCTTCAC...ATGGAGCCCCACAACTTCACAAGACAAACTTACCTGCTTCCTGTCAATATGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171353.2 |
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| CDS-3UTR CAA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGTTGAGATACCGGGTGTaGGAAGGAATACCCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWLRYRV*EGIPCG Trigger: CCCACAGGGTATTCCTTCCAACACCCGGTATCTCAA...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CAA 90 bp | CACCTTACAGCAGTTGACTTGAGGCTCCTACCCACAACATTGCCAAGAACCCCTTTGTTTTCCATGAGGTaGAGATACCGGGTGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLTAVDLRLLPTTLPRTPLFSMR*RYRVLE Trigger: TTCCAACACCCGGTATCTCAACCTCATGGAAAACAA...AGGGGTTCTTGGCAATGTTGTGGGTAGGAGCCTCAAGTCAACTGCTGTAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATAACAGTTCCAGAGTGTaGAGACTGGCGAGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNNSSRV*RLARPL Trigger: CAATGGCCTCGCCAGTCTCAACACTCTGGAACTGTT...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATCCCAAGTTCAGGTACTaGAGGTTGAACAGCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNPKFRY*RLNSPS Trigger: TGAGGGGCTGTTCAACCTCAAGTACCTGAACTTGGG...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CAA 90 bp | TCATGCCCAACTCATTTGTGTGTTCCCCTTGTCAGTGTTCTTGTAACATCCTGGATCACCCACAGTTTTTaGAGGGAGCTTAGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SCPTHLCVPLVSVLVTSWITHSF*RELRPW Trigger: CCATGGCCTAAGCTCCCTCAAAAAACTGTGGGTGAT...CCAGGATGTTACAAGAACACTGACAAGGGGAACACACAAATGAGTTGGGCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTACAATCATTTGTCAGATACCCGGAACAACAGGTGGCCACTGCACAATATGACTGTCAGCCAGTaGTCGAACAGTTCCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IVYNHLSDTRNNRWPLHNMTVSQ*SNSSRV Trigger: CACTCTGGAACTGTTCGACAACTGGCTGACAGTCAT...ATTGTGCAGTGGCCACCTGTTGTTCCGGGTATCTGACAAATGATTGTAGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS-3UTR CAA 90 bp | AATGGTGCCCATTCAACAGAATTTCATGCCCAACTCATTTGTGTGTTCCCCTTGATATACTCCAGCTTCTaGAGTTCCCCCAAGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NGAHSTEFHAQLICVFPLIYSSF*SSPKSR Trigger: TCTGGACTTGGGGGAACTCAAGAAGCTGGAGTATAT...CAAGGGGAACACACAAATGAGTTGGGCATGAAATTCTGTTGAATGGGCACCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
||
| CDS CAA 72 bp | AGCGGCAGCAGCGATGGCTGCACACAGAATCCACACTaGCGCCGTGAGGTAGACGACGGGAAGCAGGACGGC | + |
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Preference number: 6 (lower is better) Translates to: SGSSDGCTQNPH*RREVDDGKQDG Trigger: GCCGTCCTGCTTCCCGTCGTCTACCTCACGGCGCAAGTGTGGATTCTGTGTGCAGCCATCGCTGCTGCCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CAA 90 bp | ACAGAGATCCGGGGATGCCGGGAGGCGTGGCTGAGCACTGTCCCATaGGGCAGCAACCACTTCACAGAGGACATAGGGGGAGTCCGACAC | + |
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Preference number: 6 (lower is better) Translates to: TEIRGCREAWLSTVP*GSNHFTEDIGGVRH Trigger: GTGTCGGACTCCCCCTATGTCCTCTGTGAAGTGGTTGCTGCCCAATGGGACAGTGCTCAGCCACGCCTCCCGGCATCCCCGGATCTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS TCA 72 bp | CCTCAGAGAGTCCCCGGCGGGTGCACACCACCTTGCTaGACTGGTTACTGCAGGAACAGACGGAGGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PQRVPGGCTPPC*TGYCRNRRRGS Trigger: ACTGCCCCTCCGTCTGTTCCTGCAGTAACCAGTTCAGCAAGGTGGTGTGCACCCGCCGGGGACTCTCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS GCA 72 bp | AGACTGGCGAGGCCATTGAAGGCCCCCACCTCTATCTaGCTGATGGAGTTCCTGCCCAGCTGCAGGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RLARPLKAPTSI*LMEFLPSCRTS Trigger: GGAGGTCCTGCAGCTGGGCAGGAACTCCATCAGGCAGATAGAGGTGGGGGCCTTCAATGGCCTCGCCAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 72 bp | AACTGGTTACTGCAGGAACAGACGGAGGGGCAGTTTTaGGGCCCGGCTGAAGCGGCAGCAGCGATGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: NWLLQEQTEGQF*GPAEAAAAMAA Trigger: TGCAGCCATCGCTGCTGCCGCTTCAGCCGGGCCCCAAAACTGCCCCTCCGTCTGTTCCTGCAGTAACCAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 72 bp | GGTCCACCTCTACCAGGTAGCGGCCTCGCATGTGCATaGGAGCATGACAGCGGCCACAGCAGGTGGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: GPPLPGSGLACA*EHDSGHSRWNW Trigger: CCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGCGAGGCCGCTACCTGGTAGAGGTGGACC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS TCA 72 bp | CAGCGATGGCTGCACACAGAATCCACACTTGCGCCGTaGGGTAGACGACGGGAAGCAGGACGGCATTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QRWLHTESTLAP*GRRREAGRHSR Trigger: CCTGGAATGCCGTCCTGCTTCCCGTCGTCTACCTCACGGCGCAAGTGTGGATTCTGTGTGCAGCCATCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS TCA 72 bp | GAGGGTACTGGCACCTGCTTGGGCACACGGGTGGTCTaGATGAGCACCGTGGTAGAGGTGGTATATGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: EGTGTCLGTRVV*MSTVVEVVYAG Trigger: GCCGGCATATACCACCTCTACCACGGTGCTCATTCAGACCACCCGTGTGCCCAAGCAGGTGCCAGTACCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS CCA 72 bp | GAGGTTGAGATACCGGGTGTTGGAAGGAATACCCTGTaGGACCTCAGAGAGTCCCCGGCGGGTGCACACCAC | + |
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Preference number: 6 (lower is better) Translates to: EVEIPGVGRNTL*DLRESPAGAHH Trigger: GTGGTGTGCACCCGCCGGGGACTCTCTGAGGTCCCACAGGGTATTCCTTCCAACACCCGGTATCTCAACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CAA 72 bp | CTGCCCCCTCACCTGATACACCGGACGGAGCTGCTGTaGCTGCTGCAGGTGCTGCTGCTGGGATGTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LPPHLIHRTELL*LLQVLLLGCLH Trigger: ATGAAGACATCCCAGCAGCAGCACCTGCAGCAGCAACAGCAGCTCCGTCCGGTGTATCAGGTGAGGGGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CAA 90 bp | GCAACACTACTGCCCCCTCACCTGATACACCGGACGGAGCTGCTGTaGCTGCTGCAGGTGCTGCTGCTGGGATGTCTTCATCCACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ATLLPPHLIHRTELL*LLQVLLLGCLHPPG Trigger: TCCAGGTGGATGAAGACATCCCAGCAGCAGCACCTGCAGCAGCAACAGCAGCTCCGTCCGGTGTATCAGGTGAGGGGGCAGTAGTGTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS GCA 72 bp | TTCAAGGTGCCATCATTGAGAACAGAGATCCGGGGATaGCGGGAGGCGTGGCTGAGCACTGTCCCATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: FKVPSLRTEIRG*REAWLSTVPLG Trigger: GCCCAATGGGACAGTGCTCAGCCACGCCTCCCGGCATCCCCGGATCTCTGTTCTCAATGATGGCACCTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 72 bp | AGGCCATGGAAGGACCCAGGCCTGATCTCAGGAAAGTaGTTCCCTGACATCTCAAGCTCCTCGAGCCCCACC | + |
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Preference number: 6 (lower is better) Translates to: RPWKDPGLISGK*FPDISSSSSPT Trigger: GGTGGGGCTCGAGGAGCTTGAGATGTCAGGGAACCACTTTCCTGAGATCAGGCCTGGGTCCTTCCATGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 72 bp | GCATGGGAGCATGACAGCGGCCACAGCAGGTGGAATTaGTTGGGATATACTCCCGAAGCCACCAAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AWEHDSGHSRWN*LGYTPEATKPA Trigger: GGCTGGCTTGGTGGCTTCGGGAGTATATCCCAACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 72 bp | CATCCAGGCTGGTCTGCATCTTGTCAGTGGTATCTGTaGAGGGTACTGGCACCTGCTTGGGCACACGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: HPGWSASCQWYL*RVLAPAWAHGW Trigger: CCACCCGTGTGCCCAAGCAGGTGCCAGTACCCTCCACAGATACCACTGACAAGATGCAGACCAGCCTGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS TCA 72 bp | GTCATGTATTGTGGGCAACACTACTGCCCCCTCACCTaGTACACCGGACGGAGCTGCTGTTGCTGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VMYCGQHYCPLT*YTGRSCCCCCR Trigger: CCTGCAGCAGCAACAGCAGCTCCGTCCGGTGTATCAGGTGAGGGGGCAGTAGTGTTGCCCACAATACATGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS GCA 72 bp | CACAGAGGACATAGGGGGAGTCCGACACTTCAGTTCTaGCATCCGATCCTCAGAGATATTGAGGTCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: HRGHRGSPTLQF*HPILRDIEVPG Trigger: CCCCGGGACCTCAATATCTCTGAGGATCGGATGGCAGAACTGAAGTGTCGGACTCCCCCTATGTCCTCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 72 bp | GGTCTGCATCTTGTCAGTGGTATCTGTGGAGGGTACTaGCACCTGCTTGGGCACACGGGTGGTCTGAATGAG | + |
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Preference number: 6 (lower is better) Translates to: GLHLVSGICGGY*HLLGHTGGLNE Trigger: CTCATTCAGACCACCCGTGTGCCCAAGCAGGTGCCAGTACCCTCCACAGATACCACTGACAAGATGCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS CAA 90 bp | GCATGTGCATGGGAGCATGACAGCGGCCACAGCAGGTGGAATTGGTaGGGATATACTCCCGAAGCCACCAAGCCAGCCACAGAATATCAC | + |
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Preference number: 6 (lower is better) Translates to: ACAWEHDSGHSRWNW*GYTPEATKPATEYH Trigger: GTGATATTCTGTGGCTGGCTTGGTGGCTTCGGGAGTATATCCCAACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CAA 90 bp | CCAGTGTCTATGAGCAGCACACGAGAAAAGTTCAAGGTGCCATCATaGAGAACAGAGATCCGGGGATGCCGGGAGGCGTGGCTGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: PVSMSSTREKFKVPS*RTEIRGCREAWLST Trigger: AGTGCTCAGCCACGCCTCCCGGCATCCCCGGATCTCTGTTCTCAATGATGGCACCTTGAACTTTTCTCGTGTGCTGCTCATAGACACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS GCA 72 bp | TGCCATCCGATCCTCAGAGATATTGAGGTCCCGGGGTaGATCCATGATGAAAGGGGCAGAGCACTGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: CHPILRDIEVPG*IHDERGRALKG Trigger: GCCTTTCAGTGCTCTGCCCCTTTCATCATGGATGCACCCCGGGACCTCAATATCTCTGAGGATCGGATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 72 bp | GGACGGAGCTGCTGTTGCTGCTGCAGGTGCTGCTGCTaGGATGTCTTCATCCACCTGGATAATCTCTACTGT | + |
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Preference number: 6 (lower is better) Translates to: GRSCCCCCRCCC*DVFIHLDNLYC Trigger: ACAGTAGAGATTATCCAGGTGGATGAAGACATCCCAGCAGCAGCACCTGCAGCAGCAACAGCAGCTCCGTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS CAA 72 bp | ATGAGCAGCACACGAGAAAAGTTCAAGGTGCCATCATaGAGAACAGAGATCCGGGGATGCCGGGAGGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: MSSTREKFKVPS*RTEIRGCREAW Trigger: CCACGCCTCCCGGCATCCCCGGATCTCTGTTCTCAATGATGGCACCTTGAACTTTTCTCGTGTGCTGCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CAA 72 bp | CGACACTTCAGTTCTGCCATCCGATCCTCAGAGATATaGAGGTCCCGGGGTGCATCCATGATGAAAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RHFSSAIRSSEI*RSRGASMMKGA Trigger: TGCCCCTTTCATCATGGATGCACCCCGGGACCTCAATATCTCTGAGGATCGGATGGCAGAACTGAAGTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CAA 72 bp | GTGGTCTTCATGACTTCATCCAGGCTGGTCTGCATCTaGTCAGTGGTATCTGTGGAGGGTACTGGCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: VVFMTSSRLVCI*SVVSVEGTGTC Trigger: GCAGGTGCCAGTACCCTCCACAGATACCACTGACAAGATGCAGACCAGCCTGGATGAAGTCATGAAGACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS CCA 72 bp | AGGTGGTATATGCCGGCTGGTAACCAGTGGATGTGGTaGGAACAGGCTTGTACTTCCGTGTTATGTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RWYMPAGNQWMW*EQACTSVLCPQ Trigger: CTGAGGACATAACACGGAAGTACAAGCCTGTTCCCACCACATCCACTGGTTACCAGCCGGCATATACCACCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS TCA 72 bp | GGTGTAGGTGCAACTCCACCAGGTATCTCAGGGGTGTaGAGAGGTCATGGGGCAAAGATGAGAGGTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: GVGATPPGISGV*RGHGAKMRGYC Trigger: ACAATAACCTCTCATCTTTGCCCCATGACCTCTTCACACCCCTGAGATACCTGGTGGAGTTGCACCTACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CCA 72 bp | GGTGCCGCTTGCGAAGTTTATAGAAGACAATCAACATaGCAGCAGCTAGGAGAGTCACTGCCACAAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GAACEVYRRQST*QQLGESLPQSS Trigger: GCTGCTTTGTGGCAGTGACTCTCCTAGCTGCTGCCATGTTGATTGTCTTCTATAAACTTCGCAAGCGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062304.7 ENSMUST00000171353.2 |
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| CDS TCA 72 bp | CATGGGGCAAAGATGAGAGGTTATTGTGGGCTAAGTTaGGTTCCACGAGGGAAGCCAGTCCGTCAAAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HGAKMRGYCGLS*VPRGKPVRQKH Trigger: ATGCTTTTGACGGACTGGCTTCCCTCGTGGAACTCAACTTAGCCCACAATAACCTCTCATCTTTGCCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS CAA 72 bp | TCATGGGGCAAAGATGAGAGGTTATTGTGGGCTAAGTaGAGTTCCACGAGGGAAGCCAGTCCGTCAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SWGKDERLLWAK*SSTREASPSKA Trigger: TGCTTTTGACGGACTGGCTTCCCTCGTGGAACTCAACTTAGCCCACAATAACCTCTCATCTTTGCCCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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| CDS TCA 72 bp | CATTGGTCACCATGCATGTGTATACTCCAGTGTCTATaGGCAGCACACGAGAAAAGTTCAAGGTGCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: HWSPCMCILQCL*AAHEKSSRCHH Trigger: ATGATGGCACCTTGAACTTTTCTCGTGTGCTGCTCATAGACACTGGAGTATACACATGCATGGTGACCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062304.7 |
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