Pregenerated sensors for LRRC3C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000086545

Ensembl transcript IDs: ENSMUST00000142268.3

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGTTGGCGTCCAGGTAAAGCTTTCGGGTGTCGTTGGGGATACCGTTaGGCACGGCACTCAGACCAGCCCGGCTGCAGCGGAATGTCTGTT	+
Preference number: 5 (lower is better) Translates to: GWRPGKAFGCRWGYR*ARHSDQPGCSGMSV Trigger: AACAGACATTCCGCTGCAGCCGGGCTGGTCTGAGTGCCGTGCCCAACGGTATCCCCAACGACACCCGAAAGCTTTACCTGGACGCCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142268.3
CDS TCA 72 bp	CCTCTGAGCGCACAGGCTGCGCGGGAGGAGCCCGCTTaGCCGGGCGCCGCGTCTCATCTCGGTTCTGCCACA	+
Preference number: 6 (lower is better) Translates to: PLSAQAAREEPA*PGAASHLGSAT Trigger: TGTGGCAGAACCGAGATGAGACGCGGCGCCCGGTCAAGCGGGCTCCTCCCGCGCAGCCTGTGCGCTCAGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142268.3
CDS CAA 72 bp	TCCTCTGAGCGCACAGGCTGCGCGGGAGGAGCCCGCTaGACCGGGCGCCGCGTCTCATCTCGGTTCTGCCAC	+
Preference number: 6 (lower is better) Translates to: SSERTGCAGGAR*TGRRVSSRFCH Trigger: GTGGCAGAACCGAGATGAGACGCGGCGCCCGGTCAAGCGGGCTCCTCCCGCGCAGCCTGTGCGCTCAGAGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142268.3
CDS CCA 72 bp	CCACGAAGGCTGCCACAGGCACAGATGCTAGCTGGTTaGCAGAGAGGTCGAGGTGGCGCAGAGTGCCCTCCA	+
Preference number: 6 (lower is better) Translates to: PRRLPQAQMLAG*QRGRGGAECPP Trigger: TGGAGGGCACTCTGCGCCACCTCGACCTCTCTGCCAACCAGCTAGCATCTGTGCCTGTGGCAGCCTTCGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142268.3
CDS CCA 72 bp	GCTGGAAGGCACCAGCTGGCACTGATGCCAACTGGTTaGCGTCCAGGTAAAGCTTTCGGGTGTCGTTGGGGA	+
Preference number: 6 (lower is better) Translates to: AGRHQLALMPTG*RPGKAFGCRWG Trigger: TCCCCAACGACACCCGAAAGCTTTACCTGGACGCCAACCAGTTGGCATCAGTGCCAGCTGGTGCCTTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142268.3
CDS CCA 72 bp	CCTGGTGAGCAGAAGGAACTCGTGTCCCACGAGATCTaGTCGGGCTTCTGGACCACACACAATGCCTGTCCC	+
Preference number: 6 (lower is better) Translates to: PGEQKELVSHEI*SGFWTTHNACP Trigger: GGGACAGGCATTGTGTGTGGTCCAGAAGCCCGACCAGATCTCGTGGGACACGAGTTCCTTCTGCTCACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142268.3

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