Pregenerated sensors for LRRC3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045201Ensembl transcript IDs: ENSMUST00000055211.6, ENSMUST00000163937.3, ENSMUST00000223700.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTCGTCATTGGCAGCATTaGGGAAAGGTCTCCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMARHWQH*GKVSQR Trigger: ACGCTGGGAGACCTTTCCTCAATGCTGCCAATGACG...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTTGGATGCCATGCTCCTaGGAACTTGCTGGAGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMAWMPCS*ELAGEY Trigger: GTACTCTCCAGCAAGTTCTCAGGAGCATGGCATCCA...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTTTGTGTGCTGTCTCATaGTTGGATGCCATGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMALCAVS*LDAMLL Trigger: CAGGAGCATGGCATCCAATCATGAGACAGCACACAA...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTGTCATCAGGCTCATCTaGCTTCTTTTGCCTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMAVIRLI*LLLPAW Trigger: CCAAGCAGGCAAAAGAAGGCAGATGAGCCTGATGAC...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTGGTCTGCAGGGTTTCTaGTACTCCTTTGAATGCATG | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMAGLQGF*YSFECM Trigger: CATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACC...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTCTGCCTTCTTTTGCCTaGTTGGCAGGGATTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMALPSFA*LAGISS Trigger: ACTTGAAATCCCTGCCAAGCAGGCAAAAGAAGGCAG...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTTCATCTGCCTTCTTTTaGCTGCTTGGCAGGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMASSAFF*LLGRDF Trigger: GAAATCCCTGCCAAGCAGGCAAAAGAAGGCAGATGA...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCGTCATTGGCAGCATTaGGGAAAGGTCTCCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGRHWQH*GKVSQR Trigger: ACGCTGGGAGACCTTTCCTCAATGCTGCCAATGACG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTATGCTCCTGAGAACTTaGTGGAGAGTACAGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMAMLLRT*WRVQSQ Trigger: TTGTGACTGTACTCTCCAGCAAGTTCTCAGGAGCAT...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTTGTCTCATGATTGGATaGCATGCTCCTGAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMACLMIG*HAPENL Trigger: CAAGTTCTCAGGAGCATGGCATCCAATCATGAGACA...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTACAGTCACAATGCCATaGGTTGTTAGCAATCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMATVTMP*VVSNPS Trigger: GCTAGGATTGCTAACAACCCATGGCATTGTGACTGT...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTTGGATGCCATGCTCCTaGGAACTTGCTGGAGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGWMPCS*ELAGEY Trigger: GTACTCTCCAGCAAGTTCTCAGGAGCATGGCATCCA...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTGACAAGTCCAGGGTCTaGAGGGTTTCTGCTACTCCT | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGDKSRV*RVSATP Trigger: AGGAGTAGCAGAAACCCTGCAGACCCTGGACTTGTC...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTAGAGTACAGTCACAATaGCATGGGTTGTTAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMARVQSQ*HGLLAI Trigger: GATTGCTAACAACCCATGGCATTGTGACTGTACTCT...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTGCAAATCACATTGTGTaGTGTCTCATGATTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMAANHIV*CLMIGC Trigger: GCATCCAATCATGAGACAGCACACAATGTGATTTGC...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTCTTCTTTTGCCTGCTTaGCAGGGATTTCAAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMALLLPA*QGFQVF Trigger: GAATACTTGAAATCCCTGCCAAGCAGGCAAAAGAAG...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTCACATACTGGCAGAATaGAAACACAGTATCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMAHILAE*KHSIIS Trigger: ACTGATGATACTGTGTTTTCATTCTGCCAGTATGTG...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTTTAAGCACTCTCAGTTaGTGGAGGTCCTTAAAAATC | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMALSTLS*WRSLKI Trigger: GATTTTTAAGGACCTCCATCAACTGAGAGTGCTTAA...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTACTCCTTTGAATGCATaGTCGTCAATAAACTCGATG | + |
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Preference number: 4 (lower is better) Translates to: SLIFLQTEAPFPVPASMATPLNA*SSINSM Trigger: CATCGAGTTTATTGACGAGCATGCATTCAAAGGAGT...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTGTCATCAGGCTCATCTaGCTTCTTTTGCCTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGVIRLI*LLLPAW Trigger: CCAAGCAGGCAAAAGAAGGCAGATGAGCCTGATGAC...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCCGTCATTGGCAGCATTaGGGAAAGGTCTCCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLRHWQH*GKVSQR Trigger: ACGCTGGGAGACCTTTCCTCAATGCTGCCAATGACG...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTGGTCTGCAGGGTTTCTaGTACTCCTTTGAATGCATG | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGGLQGF*YSFECM Trigger: CATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACC...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCTGCCTTCTTTTGCCTaGTTGGCAGGGATTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGLPSFA*LAGISS Trigger: ACTTGAAATCCCTGCCAAGCAGGCAAAAGAAGGCAG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCTCTGGGTATTTCCTTaGGATTTGCATTGCTACAGG | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGLWVFP*DLHCYR Trigger: CCTGTAGCAATGCAAATCTCAAGGAAATACCCAGAG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCATTGGGGATGGATGTaGTCTGATTGGAGTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGHWGWM*SDWSPN Trigger: ATTTGGACTCCAATCAGATCACATCCATCCCCAATG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCGACAAGTCCAGGGTCTaGAGGGTTTCTGCTACTCCT | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLDKSRV*RVSATP Trigger: AGGAGTAGCAGAAACCCTGCAGACCCTGGACTTGTC...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTATGCTCCTGAGAACTTaGTGGAGAGTACAGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGMLLRT*WRVQSQ Trigger: TTGTGACTGTACTCTCCAGCAAGTTCTCAGGAGCAT...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTATCAGTACAAAGCTTTaGAGGAGGAGACACATGGAG | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGISTKL*RRRHME Trigger: CTCCATGTGTCTCCTCCTCCAAAGCTTTGTACTGAT...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTACAGTCACAATGCCATaGGTTGTTAGCAATCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGTVTMP*VVSNPS Trigger: GCTAGGATTGCTAACAACCCATGGCATTGTGACTGT...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCTTGTGTGCTGTCTCATaGTTGGATGCCATGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLLCAVS*LDAMLL Trigger: CAGGAGCATGGCATCCAATCATGAGACAGCACACAA...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTAGAGTACAGTCACAATaGCATGGGTTGTTAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGRVQSQ*HGLLAI Trigger: GATTGCTAACAACCCATGGCATTGTGACTGTACTCT...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTGCAAATCACATTGTGTaGTGTCTCATGATTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGANHIV*CLMIGC Trigger: GCATCCAATCATGAGACAGCACACAATGTGATTTGC...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCCAACACTGATGTCTTaGAAATCACATTGTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGPTLMS*KSHCVL Trigger: CAGCACACAATGTGATTTGCAAGACATCAGTGTTGG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCTTCTTTTGCCTGCTTaGCAGGGATTTCAAGTATTC | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGLLLPA*QGFQVF Trigger: GAATACTTGAAATCCCTGCCAAGCAGGCAAAAGAAG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCACATACTGGCAGAATaGAAACACAGTATCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGHILAE*KHSIIS Trigger: ACTGATGATACTGTGTTTTCATTCTGCCAGTATGTG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTTTAAGCACTCTCAGTTaGTGGAGGTCCTTAAAAATC | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGLSTLS*WRSLKI Trigger: GATTTTTAAGGACCTCCATCAACTGAGAGTGCTTAA...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTTGCTACTCCTTTGAATaGATGCTCGTCAATAAACTC | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGCYSFE*MLVNKL Trigger: GAGTTTATTGACGAGCATGCATTCAAAGGAGTAGCA...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCTCATCTGCCTTCTTTTaGCTGCTTGGCAGGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLSSAFF*LLGRDF Trigger: GAAATCCCTGCCAAGCAGGCAAAAGAAGGCAGATGA...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCCTCTGGGTATTTCCTTaGGATTTGCATTGCTACAGG | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLLWVFP*DLHCYR Trigger: CCTGTAGCAATGCAAATCTCAAGGAAATACCCAGAG...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCTGTCTCATGATTGGATaGCATGCTCCTGAGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLCLMIG*HAPENL Trigger: CAAGTTCTCAGGAGCATGGCATCCAATCATGAGACA...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCATCAGTACAAAGCTTTaGAGGAGGAGACACATGGAG | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLISTKL*RRRHME Trigger: CTCCATGTGTCTCCTCCTCCAAAGCTTTGTACTGAT...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCACAGTCACAATGCCATaGGTTGTTAGCAATCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLTVTMP*VVSNPS Trigger: GCTAGGATTGCTAACAACCCATGGCATTGTGACTGT...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTTATTTCCTTGAGATTTaGATTGCTACAGGTGACATT | + |
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Preference number: 4 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGYFLEI*IATGDI Trigger: AATGTCACCTGTAGCAATGCAAATCTCAAGGAAATA...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCAGAGTACAGTCACAATaGCATGGGTTGTTAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLRVQSQ*HGLLAI Trigger: GATTGCTAACAACCCATGGCATTGTGACTGTACTCT...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCCCAACACTGATGTCTTaGAAATCACATTGTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLPTLMS*KSHCVL Trigger: CAGCACACAATGTGATTTGCAAGACATCAGTGTTGG...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCCTTCTTTTGCCTGCTTaGCAGGGATTTCAAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLLLLPA*QGFQVF Trigger: GAATACTTGAAATCCCTGCCAAGCAGGCAAAAGAAG...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCACTCCTTTGAATGCATaGTCGTCAATAAACTCGATG | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLTPLNA*SSINSM Trigger: CATCGAGTTTATTGACGAGCATGCATTCAAAGGAGT...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR GCA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCTATTTCCTTGAGATTTaGATTGCTACAGGTGACATT | + |
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Preference number: 4 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLYFLEI*IATGDI Trigger: AATGTCACCTGTAGCAATGCAAATCTCAAGGAAATA...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTGCGTCATTGGCAGCATaGAGGAAAGGTCTCCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: SLIFLQTEAPFPVPASMAASLAA*RKGLPA Trigger: CGCTGGGAGACCTTTCCTCAATGCTGCCAATGACGC...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTCACAGGTCAGCGTCATaGGCAGCATTGAGGAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: SLIFLQTEAPFPVPASMAHRSAS*AALRKG Trigger: ACCTTTCCTCAATGCTGCCAATGACGCTGACCTGTG...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTCATCAGTACAAAGCTTaGGAGGAGGAGACACATGGA | + |
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Preference number: 5 (lower is better) Translates to: SLIFLQTEAPFPVPASMAHQYKA*EEETHG Trigger: TCCATGTGTCTCCTCCTCCAAAGCTTTGTACTGATG...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTGCGTCATTGGCAGCATaGAGGAAAGGTCTCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGASLAA*RKGLPA Trigger: CGCTGGGAGACCTTTCCTCAATGCTGCCAATGACGC...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS GCA 90 bp | GACAAGTCCAGGGTCTGCAGGGTTTCTGCTACTCCTTTGAATGCATaGTCGTCAATAAACTCGATGCCGTTTTTGGACAGGTTAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: DKSRVCRVSATPLNA*SSINSMPFLDRLST Trigger: AGTGCTTAACCTGTCCAAAAACGGCATCGAGTTTATTGACGAGCATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACCCTGGACTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS GCA 90 bp | GTCAGACAAGTCCAGGGTCTGCAGGGTTTCTGCTACTCCTTTGAATaGATGCTCGTCAATAAACTCGATGCCGTTTTTGGACAGGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRQVQGLQGFCYSFE*MLVNKLDAVFGQVK Trigger: CTTAACCTGTCCAAAAACGGCATCGAGTTTATTGACGAGCATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACCCTGGACTTGTCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTCCTTCTTTTGCCTGCTaGGCAGGGATTTCAAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SLIFLQTEAPFPVPASMAPSFAC*AGISSI Trigger: AATACTTGAAATCCCTGCCAAGCAGGCAAAAGAAGG...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS GCA 90 bp | ACTTTGAATCCTGTTGTCAGACAAGTCCAGGGTCTGCAGGGTTTCTaGTACTCCTTTGAATGCATGCTCGTCAATAAACTCGATGCCGTT | + |
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Preference number: 5 (lower is better) Translates to: TLNPVVRQVQGLQGF*YSFECMLVNKLDAV Trigger: AACGGCATCGAGTTTATTGACGAGCATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACCCTGGACTTGTCTGACAACAGGATTCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS CCA 90 bp | TTAACCCTCCAGAGGAAGAGCAAAGGCAGCCCTTGGGACACATACTaGCAGAATGAAAACACAGTATCATCAGTACAAAGCTTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LTLQRKSKGSPWDTY*QNENTVSSVQSFGG Trigger: TCCTCCAAAGCTTTGTACTGATGATACTGTGTTTTCATTCTGCCAGTATGTGTCCCAAGGGCTGCCTTTGCTCTTCCTCTGGAGGGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCACAGGTCAGCGTCATaGGCAGCATTGAGGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGHRSAS*AALRKG Trigger: ACCTTTCCTCAATGCTGCCAATGACGCTGACCTGTG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCGCGTCATTGGCAGCATaGAGGAAAGGTCTCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLASLAA*RKGLPA Trigger: CGCTGGGAGACCTTTCCTCAATGCTGCCAATGACGC...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTAACTCGATGCCGTTTTaGGACAGGTTAAGCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGNSMPF*DRLSTL Trigger: GAGAGTGCTTAACCTGTCCAAAAACGGCATCGAGTT...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | TCACTTATTTTCCTACAAACAGAAGCTCCCTTCCCAGTGCCAGCCAGCATGGCTATTTTTGTGCACACTTaGAATCCTGTTGTCAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: SLIFLQTEAPFPVPASMAIFVHT*NPVVRQ Trigger: TTGTCTGACAACAGGATTCAAAGTGTGCACAAAAAT...AGCCATGCTGGCTGGCACTGGGAAGGGAGCTTCTGTTTGTAGGAAAATAAGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCCACAGGTCAGCGTCATaGGCAGCATTGAGGAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLHRSAS*AALRKG Trigger: ACCTTTCCTCAATGCTGCCAATGACGCTGACCTGTG...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTCCTTCTTTTGCCTGCTaGGCAGGGATTTCAAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGPSFAC*AGISSI Trigger: AATACTTGAAATCCCTGCCAAGCAGGCAAAAGAAGG...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTTCTCTGGGTATTTCCTaGAGATTTGCATTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGSLGIS*RFALLQ Trigger: CTGTAGCAATGCAAATCTCAAGGAAATACCCAGAGA...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTTCCTTGAGATTTGCATaGCTACAGGTGACATTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGSLRFA*LQVTFN Trigger: GTTAAATGTCACCTGTAGCAATGCAAATCTCAAGGA...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGGTCTAACTAATGTTCAGAGAGTTTGTTACTCAGGAACCAGAGGTGTTAAGCACTCTCAGTaGATGGAGGTCCTTAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SEMGLTNVQRVCYSGTRGVKHSQ*MEVLKN Trigger: ATTTTTAAGGACCTCCATCAACTGAGAGTGCTTAAC...ACCTCTGGTTCCTGAGTAACAAACTCTCTGAACATTAGTTAGACCCATCTCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCAACTCGATGCCGTTTTaGGACAGGTTAAGCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLNSMPF*DRLSTL Trigger: GAGAGTGCTTAACCTGTCCAAAAACGGCATCGAGTT...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCTCCTTGAGATTTGCATaGCTACAGGTGACATTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLSLRFA*LQVTFN Trigger: GTTAAATGTCACCTGTAGCAATGCAAATCTCAAGGA...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTACAATGAAGGGGGAAATGAATCACTTATTTTCCTACAAACAGAAGCTCATTTTTGTGCACACTTaGAATCCTGTTGTCAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: MCTMKGEMNHLFSYKQKLIFVHT*NPVVRQ Trigger: TTGTCTGACAACAGGATTCAAAGTGTGCACAAAAAT...GAGCTTCTGTTTGTAGGAAAATAAGTGATTCATTTCCCCCTTCATTGTACACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS CAA 90 bp | GTAGTCTTTTTAGGGAGGTTACACAGGTCAGCGTCATTGGCAGCATaGAGGAAAGGTCTCCCAGCGTGCTCATCCAACACTGATGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VVFLGRLHRSASLAA*RKGLPACSSNTDVL Trigger: CAAGACATCAGTGTTGGATGAGCACGCTGGGAGACCTTTCCTCAATGCTGCCAATGACGCTGACCTGTGTAACCTCCCTAAAAAGACTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS CCA 72 bp | AATGTCATCAGGCTCATCTGCCTTCTTTTGCCTGCTTaGCAGGGATTTCAAGTATTCAAGGTGTCTCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NVIRLICLLLPA*QGFQVFKVSPG Trigger: GCCCGGAGACACCTTGAATACTTGAAATCCCTGCCAAGCAGGCAAAAGAAGGCAGATGAGCCTGATGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS CAA 90 bp | CTGTTGTCAGACAAGTCCAGGGTCTGCAGGGTTTCTGCTACTCCTTaGAATGCATGCTCGTCAATAAACTCGATGCCGTTTTTGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSDKSRVCRVSATP*NACSSINSMPFLDR Trigger: CCTGTCCAAAAACGGCATCGAGTTTATTGACGAGCATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACCCTGGACTTGTCTGACAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS TCA 72 bp | CATTGTGTGCTGTCTCATGATTGGATGCCATGCTCCTaGGAACTTGCTGGAGAGTACAGTCACAATGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: HCVLSHDWMPCS*ELAGEYSHNAM Trigger: CATGGCATTGTGACTGTACTCTCCAGCAAGTTCTCAGGAGCATGGCATCCAATCATGAGACAGCACACAATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS GCA 72 bp | AGGGTCTGCAGGGTTTCTGCTACTCCTTTGAATGCATaGTCGTCAATAAACTCGATGCCGTTTTTGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RVCRVSATPLNA*SSINSMPFLDR Trigger: CCTGTCCAAAAACGGCATCGAGTTTATTGACGAGCATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS GCA 72 bp | GTCCAGGGTCTGCAGGGTTTCTGCTACTCCTTTGAATaGATGCTCGTCAATAAACTCGATGCCGTTTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VQGLQGFCYSFE*MLVNKLDAVFG Trigger: TCCAAAAACGGCATCGAGTTTATTGACGAGCATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACCCTGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS GCA 72 bp | CCTGTTGTCAGACAAGTCCAGGGTCTGCAGGGTTTCTaGTACTCCTTTGAATGCATGCTCGTCAATAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: PVVRQVQGLQGF*YSFECMLVNKL Trigger: GAGTTTATTGACGAGCATGCATTCAAAGGAGTAGCAGAAACCCTGCAGACCCTGGACTTGTCTGACAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS TCA 72 bp | ATTGAGGAAAGGTCTCCCAGCGTGCTCATCCAACACTaGTGTCTTGCAAATCACATTGTGTGCTGTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: IEERSPSVLIQH*CLANHIVCCLM Trigger: CATGAGACAGCACACAATGTGATTTGCAAGACATCAGTGTTGGATGAGCACGCTGGGAGACCTTTCCTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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| CDS CAA 72 bp | AAAACTGTTTCAGGAGGGAGATCTCTGGGTATTTCCTaGAGATTTGCATTGCTACAGGTGACATTTAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: KTVSGGRSLGIS*RFALLQVTFNP Trigger: AGGGTTAAATGTCACCTGTAGCAATGCAAATCTCAAGGAAATACCCAGAGATCTCCCTCCTGAAACAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055211.6 ENSMUST00000163937.3 ENSMUST00000223700.2 |
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