Pregenerated sensors for LRRC39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027961Ensembl transcript IDs: ENSMUST00000029573.8
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCGGTGGCTGGCATTGTGATTGCGCTCTGTTGTCACCACAGGTGTaGCTGGAGACATTATGTGGGCAAAGAGTATTTCAAGGCTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: PGGWHCDCALLSPQV*LETLCGQRVFQGSW Trigger: CCAAGAGCCTTGAAATACTCTTTGCCCACATAATGTCTCCAGTCACACCTGTGGTGACAACAGAGCGCAATCACAATGCCAGCCACCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR TCA 90 bp | GTGAAAAAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTaGTTGCGCTCTGTTGTCACCACAGGTGTGACTGGAGACATTATG | + |
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Preference number: 1 (lower is better) Translates to: VKKMSQRHGPRWLAL*LRSVVTTGVTGDIM Trigger: CATAATGTCTCCAGTCACACCTGTGGTGACAACAGAGCGCAATCACAATGCCAGCCACCGGGGTCCATGTCTCTGGGACATCTTTTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 90 bp | AACACTTTGGCCAAGGAAGGAAGTGAAAAAGATGTCCCAGAGACATaGACCCCGGTGGCTGGCATTGTGATTGCGCTCTGTTGTCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NTLAKEGSEKDVPET*TPVAGIVIALCCHH Trigger: GTGGTGACAACAGAGCGCAATCACAATGCCAGCCACCGGGGTCCATGTCTCTGGGACATCTTTTTCACTTCCTTCCTTGGCCAAAGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 90 bp | CTTAGATGGGGCTGGAGAGATGACTCAGTGGTCAAGAGCACCGACTaGTCATCCAGAGTTTCTGAGTTCAATTCCCAGCAAGCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: LRWGWRDDSVVKSTD*SSRVSEFNSQQAHG Trigger: ACCATGTGCTTGCTGGGAATTGAACTCAGAAACTCTGGATGACCAGTCGGTGCTCTTGACCACTGAGTCATCTCTCCAGCCCCATCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 90 bp | GGACTTGGGGCGGTAGAGTTCTACTATTTCCAGAGAATGAGTAGTTaGGCAACGTGTGGAATGAGGACATCGTTGGAAGGCTCGGATGTT | + |
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Preference number: 1 (lower is better) Translates to: GLGAVEFYYFQRMSS*ATCGMRTSLEGSDV Trigger: AACATCCGAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACTACTCATTCTCTGGAAATAGTAGAACTCTACCGCCCCAAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR TCA 90 bp | GAGACAGACTCACAGATGGCAACACTGACAGTTTGCCTGGGTAAGTaGCGACAGCTACAAACACCATGCTACAGGGAGATACTTTATCCC | + |
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Preference number: 1 (lower is better) Translates to: ETDSQMATLTVCLGK*RQLQTPCYREILYP Trigger: GGGATAAAGTATCTCCCTGTAGCATGGTGTTTGTAGCTGTCGTCACTTACCCAGGCAAACTGTCAGTGTTGCCATCTGTGAGTCTGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 90 bp | GTGGCTGGCATTGTGATTGCGCTCTGTTGTCACCACAGGTGTGACTaGAGACATTATGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTT | + |
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Preference number: 1 (lower is better) Translates to: VAGIVIALCCHHRCD*RHYVGKEYFKALGL Trigger: AAGTCCAAGAGCCTTGAAATACTCTTTGCCCACATAATGTCTCCAGTCACACCTGTGGTGACAACAGAGCGCAATCACAATGCCAGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTGAAAAAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTGATTGCCCATGATTCACCATaGTACTCAGAATGCCACTAC | + |
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Preference number: 2 (lower is better) Translates to: GSEKDVPETWTPVAGIVIAHDSP*YSECHY Trigger: GTAGTGGCATTCTGAGTAGCATGGTGAATCATGGGC...AATCACAATGCCAGCCACCGGGGTCCATGTCTCTGGGACATCTTTTTCACTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGGCTCGGATGTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATGGAGTGGGTGGCCCATaGTTCACCATGCTACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LEGSDVTPERKDAQRDENGVGGP*FTMLLR Trigger: TCTGAGTAGCATGGTGAATCATGGGCCACCCACTCC...ATTCTCATCCCTTTGAGCATCTTTTCTCTCTGGAGTAACATCCGAGCCTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CAA 90 bp | TTCCAGAGAATGAGTAGTTGGGCAACGTGTGGAATGAGGACATCGTaGGAAGGCTCGGATGTTACTCCAGAGAGAAAAGATGCTCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: FQRMSSWATCGMRTS*EGSDVTPERKDAQR Trigger: CCTTTGAGCATCTTTTCTCTCTGGAGTAACATCCGAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACTACTCATTCTCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGGCTCGGATGTTACTCCAGAGAGAAAAGATGCTCAAAGGGATGAGAATAAGGATGCTCATGTGTaGGGCACAGGTTCATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LEGSDVTPERKDAQRDENKDAHV*GTGSFP Trigger: GGGGAATGAACCTGTGCCTCACACATGAGCATCCTT...ATTCTCATCCCTTTGAGCATCTTTTCTCTCTGGAGTAACATCCGAGCCTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR TCA 90 bp | GCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAACGGTGGCTGGCATTGTaGTTGCGCTCTGTTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: ALRCLVETYAASFEEKDERWLAL*LRSVVT Trigger: GGTGACAACAGAGCGCAATCACAATGCCAGCCACCG...TTCATCCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CAA 90 bp | CAGCAGAAAGGCTTCAGTCCTGCCTTACAGTACTATACGGACCCATaGGTGTCTCTGGAAAACGTATTATTAACTGCCGTACCAGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QQKGFSPALQYYTDP*VSLENVLLTAVPAH Trigger: ATGAGCTGGTACGGCAGTTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGCAGGACTGAAGCCTTTCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGGGGCTGGAGAGATaGCTCAGTGGTCAAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: MLHYDVWLKPMLPVLRKRMGLER*LSGQEH Trigger: GTGCTCTTGACCACTGAGTCATCTCTCCAGCCCCAT...CCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGCAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTGCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGGGCTGGCATTGTGATTaGGCTCTGTTGTCACCACAG | + |
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Preference number: 2 (lower is better) Translates to: MLHYDVWLKPMLPVLRKRGWHCD*ALLSPQ Trigger: CTGTGGTGACAACAGAGCGCAATCACAATGCCAGCC...CCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR TCA 90 bp | GCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAACACAGATGGCAACACTaGCAGTTTGCCTGGGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: ALRCLVETYAASFEEKDEHRWQH*QFAWVS Trigger: ACTTACCCAGGCAAACTGTCAGTGTTGCCATCTGTG...TTCATCCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCACCACAGGTGTGACTGGAGACATTATGTGGGCAAAGAGTATTTCAAGGCTCAGCTACAAACACCATaGTACAGGGAGATACTTTAT | + |
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Preference number: 2 (lower is better) Translates to: CHHRCDWRHYVGKEYFKAQLQTP*YREILY Trigger: ATAAAGTATCTCCCTGTAGCATGGTGTTTGTAGCTG...AGCCTTGAAATACTCTTTGCCCACATAATGTCTCCAGTCACACCTGTGGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR TCA 90 bp | GCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAAATCTTTGTAAACTGCTaGTTGACCAAGGCAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: ALRCLVETYAASFEEKDEIFVNC*LTKADS Trigger: GGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGAT...TTCATCCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR TCA 90 bp | GCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAAACTATTTCCAGAGAATaGGTAGTTGGGCAACGTGTG | + |
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Preference number: 2 (lower is better) Translates to: ALRCLVETYAASFEEKDETISRE*VVGQRV Trigger: CACACGTTGCCCAACTACTCATTCTCTGGAAATAGT...TTCATCCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR GCA 90 bp | GCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAACCATGCTACTCAGAATaGCACTACCAATGGTTCATT | + |
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Preference number: 2 (lower is better) Translates to: ALRCLVETYAASFEEKDEPCYSE*HYQWFI Trigger: AATGAACCATTGGTAGTGGCATTCTGAGTAGCATGG...TTCATCCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR-3UTR CCA 90 bp | GCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAAGGCAGTGGCCAAACTTaGTATGAACTTTTACCAAAC | + |
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Preference number: 2 (lower is better) Translates to: ALRCLVETYAASFEEKDEGSGQT*YELLPN Trigger: GTTTGGTAAAAGTTCATACCAAGTTTGGCCACTGCC...TTCATCCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | GCCAAGGAAGGAAGTGAAAAAGATGTCCCAGAGACATaGACCCCGGTGGCTGGCATTGTGATTGCGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: AKEGSEKDVPET*TPVAGIVIALC Trigger: ACAGAGCGCAATCACAATGCCAGCCACCGGGGTCCATGTCTCTGGGACATCTTTTTCACTTCCTTCCTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR TCA 72 bp | AGTGGTCAAGAGCACCGACTGGTCATCCAGAGTTTCTaGGTTCAATTCCCAGCAAGCACATGGTGGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: SGQEHRLVIQSF*VQFPASTWWLT Trigger: TGTGAGCCACCATGTGCTTGCTGGGAATTGAACTCAGAAACTCTGGATGACCAGTCGGTGCTCTTGACCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR GCA 72 bp | GGCGTCTTAGAAGCATCAGACATAGCGCCTAGTACGTaGTGTTGGCTAGTTAGCAGCTTCGTAAATGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: GVLEASDIAPST*CWLVSSFVNGS Trigger: ACTGCCATTTACGAAGCTGCTAACTAGCCAACAGCACGTACTAGGCGCTATGTCTGATGCTTCTAAGACGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR GCA 72 bp | CCGGATAGGAAGGAGTGGGTGGCCCATGATTCACCATaGTACTCAGAATGCCACTACCAATGGTTCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: PDRKEWVAHDSP*YSECHYQWFIF Trigger: GAAAATGAACCATTGGTAGTGGCATTCTGAGTAGCATGGTGAATCATGGGCCACCCACTCCTTCCTATCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | AGAAAAGTCTTAGATGGGGCTGGAGAGATGACTCAGTaGTCAAGAGCACCGACTGGTCATCCAGAGTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: RKVLDGAGEMTQ*SRAPTGHPEFL Trigger: CAGAAACTCTGGATGACCAGTCGGTGCTCTTGACCACTGAGTCATCTCTCCAGCCCCATCTAAGACTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | TTAGAAGCATCAGACATAGCGCCTAGTACGTGCTGTTaGCTAGTTAGCAGCTTCGTAAATGGCAGTGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LEASDIAPSTCC*LVSSFVNGSGQ Trigger: TTGGCCACTGCCATTTACGAAGCTGCTAACTAGCCAACAGCACGTACTAGGCGCTATGTCTGATGCTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | TCTGTTGTCACCACAGGTGTGACTGGAGACATTATGTaGGCAAAGAGTATTTCAAGGCTCTTGGACTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SVVTTGVTGDIM*AKSISRLLDLG Trigger: CCCCAAGTCCAAGAGCCTTGAAATACTCTTTGCCCACATAATGTCTCCAGTCACACCTGTGGTGACAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR TCA 72 bp | TGGCATTGTGATTGCGCTCTGTTGTCACCACAGGTGTaGCTGGAGACATTATGTGGGCAAAGAGTATTTCAA | + |
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Preference number: 3 (lower is better) Translates to: WHCDCALLSPQV*LETLCGQRVFQ Trigger: TTGAAATACTCTTTGCCCACATAATGTCTCCAGTCACACCTGTGGTGACAACAGAGCGCAATCACAATGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | ATTGTGATTGCGCTCTGTTGTCACCACAGGTGTGACTaGAGACATTATGTGGGCAAAGAGTATTTCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: IVIALCCHHRCD*RHYVGKEYFKA Trigger: AGCCTTGAAATACTCTTTGCCCACATAATGTCTCCAGTCACACCTGTGGTGACAACAGAGCGCAATCACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | TTAATTGTGATCATAAAGAAAAGTCTTAGATGGGGCTaGAGAGATGACTCAGTGGTCAAGAGCACCGACTGG | + |
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Preference number: 3 (lower is better) Translates to: LIVIIKKSLRWG*RDDSVVKSTDW Trigger: CCAGTCGGTGCTCTTGACCACTGAGTCATCTCTCCAGCCCCATCTAAGACTTTTCTTTATGATCACAATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | TTATGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTTaGGGCGGTAGAGTTCTACTATTTCCAGAGAATGAG | + |
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Preference number: 3 (lower is better) Translates to: LCGQRVFQGSWT*GGRVLLFPENE Trigger: CTCATTCTCTGGAAATAGTAGAACTCTACCGCCCCAAGTCCAAGAGCCTTGAAATACTCTTTGCCCACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | CCATACTGCTTACTGAACTTTAAAGATGATGCGGTTTaGTGGGGGCACATGATTGTGTTTGCAGATGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: PYCLLNFKDDAV*WGHMIVFADVA Trigger: TGCAACATCTGCAAACACAATCATGTGCCCCCACCAAACCGCATCATCTTTAAAGTTCAGTAAGCAGTATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CCA 72 bp | TACTGCTTACTGAACTTTAAAGATGATGCGGTTTGGTaGGGGCACATGATTGTGTTTGCAGATGTTGCATTA | + |
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Preference number: 3 (lower is better) Translates to: YCLLNFKDDAVW*GHMIVFADVAL Trigger: TAATGCAACATCTGCAAACACAATCATGTGCCCCCACCAAACCGCATCATCTTTAAAGTTCAGTAAGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR GCA 90 bp | AGTCTTAGATGGGGCTGGAGAGATGACTCAGTGGTCAAGAGCACCGACTGGTCAGAGTCAGGAAGCTGTTaGAGGCTGTTGCTTCCCATA | + |
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Preference number: 4 (lower is better) Translates to: SLRWGWRDDSVVKSTDWSESGSC*RLLLPI Trigger: TATGGGAAGCAACAGCCTGCAACAGCTTCCTGACTC...TGACCAGTCGGTGCTCTTGACCACTGAGTCATCTCTCCAGCCCCATCTAAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CCA 90 bp | AGTTGGGCAACGTGTGGAATGAGGACATCGTTGGAAGGCTCGGATGTTACTCCACAGTTTGCTGAGCTCTaGTGGGAGGTCACTTATATC | + |
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Preference number: 4 (lower is better) Translates to: SWATCGMRTSLEGSDVTPQFAEL*WEVTYI Trigger: GATATAAGTGACCTCCCACCAGAGCTCAGCAAACTG...TGGAGTAACATCCGAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CCA 90 bp | TGTCACCACAGGTGTGACTGGAGACATTATGTGGGCAAAGAGTATTTCAAGGCTCATCTGTGTTGTCGCTaGGAGGAAGCGTCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CHHRCDWRHYVGKEYFKAHLCCR*EEASPP Trigger: TGGAGGTGACGCTTCCTCCCAGCGACAACACAGATG...AGCCTTGAAATACTCTTTGCCCACATAATGTCTCCAGTCACACCTGTGGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR GCA 90 bp | AGTCTTAGATGGGGCTGGAGAGATGACTCAGTGGTCAAGAGCACCGACTGGTCATATGCGTGCATAAACTaGAGCCCAAATAACTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLRWGWRDDSVVKSTDWSYACIN*SPNNSC Trigger: ACAGGAGTTATTTGGGCTGCAGTTTATGCACGCATA...TGACCAGTCGGTGCTCTTGACCACTGAGTCATCTCTCCAGCCCCATCTAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR TCA 90 bp | ATGTTGCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGCTTCCTTTACAGCACTaGCGGCCCCGGTACAAACCG | + |
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Preference number: 4 (lower is better) Translates to: MLHYDVWLKPMLPVLRKRLPLQH*RPRYKP Trigger: CGGTTTGTACCGGGGCCGTCAGTGCTGTAAAGGAAG...CCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGCAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR TCA 90 bp | GGAAGTGAAAAAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTGATTTCTCTATCCTTAAAATaGCTCTTCCATCTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GSEKDVPETWTPVAGIVISLSLK*LFHLPW Trigger: CCAGGGAAGATGGAAGAGTCATTTTAAGGATAGAGA...AATCACAATGCCAGCCACCGGGGTCCATGTCTCTGGGACATCTTTTTCACTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR TCA 90 bp | AGTCTTAGATGGGGCTGGAGAGATGACTCAGTGGTCAAGAGCACCGACTGGTCATGCCATTCCTGTAGCTaGTTCAGTTTCAGTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SLRWGWRDDSVVKSTDWSCHSCS*FSFSKE Trigger: TTCTTTACTGAAACTGAATCAGCTACAGGAATGGCA...TGACCAGTCGGTGCTCTTGACCACTGAGTCATCTCTCCAGCCCCATCTAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR GCA 90 bp | AGTTGGGCAACGTGTGGAATGAGGACATCGTTGGAAGGCTCGGATGTTACTCCATCGTCATTTCTTCCATaGAGCCTGGGATATCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SWATCGMRTSLEGSDVTPSSFLP*SLGYLV Trigger: TACAAGATATCCCAGGCTGCATGGAAGAAATGACGA...TGGAGTAACATCCGAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR GCA 90 bp | TATGTGGGCAAAGAGTATTTCAAGGCTCTTGGACTTGGGGCGGTAGAGTTCTACGGACTCTTGTATGTATaGGTGCATAAACTGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: YVGKEYFKALGLGAVEFYGLLYV*VHKLQP Trigger: GGGCTGCAGTTTATGCACGCATACATACAAGAGTCC...GTAGAACTCTACCGCCCCAAGTCCAAGAGCCTTGAAATACTCTTTGCCCACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CCA 90 bp | CAGTATTTACAGCAGAAAGGCTTCAGTCCTGCCTTACAGTACTATACGGACCCAGTCAGACAGTTGACTTaGTCTTCTGTTCTCCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QYLQQKGFSPALQYYTDPVRQLT*SSVLRD Trigger: GTCCCGGAGAACAGAAGACCAAGTCAACTGTCTGAC...TGGGTCCGTATAGTACTGTAAGGCAGGACTGAAGCCTTTCTGCTGTAAATACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CAA 72 bp | ATGAGTAGTTGGGCAACGTGTGGAATGAGGACATCGTaGGAAGGCTCGGATGTTACTCCAGAGAGAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: MSSWATCGMRTS*EGSDVTPERKD Trigger: ATCTTTTCTCTCTGGAGTAACATCCGAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACTACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR TCA 90 bp | ACTCCAGTATTTACAGCAGAAAGGCTTCAGTCCTGCCTTACAGTACTATACGGAGGGATCGTAGTGAACTaGTTCATACTCAGGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TPVFTAERLQSCLTVLYGGIVVN*FILRSR Trigger: CCTTGACCTGAGTATGAATCAGTTCACTACGATCCC...TCCGTATAGTACTGTAAGGCAGGACTGAAGCCTTTCTGCTGTAAATACTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR GCA 90 bp | CAGAAAGGCTTCAGTCCTGCCTTACAGTACTATACGGACCCATTGGTGTCTCTGTCTTGTATGTATGCGTaGATAAACTGCAGCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QKGFSPALQYYTDPLVSLSCMYA*INCSPN Trigger: ATTTGGGCTGCAGTTTATGCACGCATACATACAAGA...CAGAGACACCAATGGGTCCGTATAGTACTGTAAGGCAGGACTGAAGCCTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CCA 90 bp | AACTGCCGTACCAGCTCATCCGTCATCGCAGGAAAAACATCATCAATGAAAGGACTAGCTTCTCCAAGCTaGTACAGTTGCTCAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NCRTSSSVIAGKTSSMKGLASPS*YSCSVL Trigger: AAGAACTGAGCAACTGTACCAGCTTGGAGAAGCTAG...TCCTTTCATTGATGATGTTTTTCCTGCGATGACGGATGAGCTGGTACGGCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CCA 90 bp | AACTGCCGTACCAGCTCATCCGTCATCGCAGGAAAAACATCATCAATGAAAGGATTTGCTGAGCTCTGGTaGGAGGTCACTTATATCTCT | + |
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Preference number: 4 (lower is better) Translates to: NCRTSSSVIAGKTSSMKGFAELW*EVTYIS Trigger: AGAGATATAAGTGACCTCCCACCAGAGCTCAGCAAA...TCCTTTCATTGATGATGTTTTTCCTGCGATGACGGATGAGCTGGTACGGCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CAA 72 bp | GGCTTCAGTCCTGCCTTACAGTACTATACGGACCCATaGGTGTCTCTGGAAAACGTATTATTAACTGCCGTA | + |
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Preference number: 4 (lower is better) Translates to: GFSPALQYYTDP*VSLENVLLTAV Trigger: TACGGCAGTTAATAATACGTTTTCCAGAGACACCAATGGGTCCGTATAGTACTGTAAGGCAGGACTGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR TCA 90 bp | AACTGCCGTACCAGCTCATCCGTCATCGCAGGAAAAACATCATCAATGAAAGGAATACTCAGGTCAAGGTaGGTGAGTTTTAACAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: NCRTSSSVIAGKTSSMKGILRSR*VSFNSL Trigger: CAAACTGTTAAAACTCACTCACCTTGACCTGAGTAT...TCCTTTCATTGATGATGTTTTTCCTGCGATGACGGATGAGCTGGTACGGCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR TCA 90 bp | GCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAACTAAGAATCAGTTCCTaGAGTCTAGTGAGCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALRCLVETYAASFEEKDELRISS*SLVSSP Trigger: TGGACTGCTCACTAGACTTCAGGAACTGATTCTTAG...TTCATCCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR TCA 90 bp | TTGCAGATGTTGCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGGTAGTTTGTTGTTGCTaGGAACAAGAGTACCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LQMLHYDVWLKPMLPVLRVVCCC*EQEYPS Trigger: ACTTGGGTACTCTTGTTCTCAGCAACAACAAACTAC...CCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGCAACATCTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR GCA 90 bp | CAGTATTTACAGCAGAAAGGCTTCAGTCCTGCCTTACAGTACTATACGGACCCATCTAGCACAATGAGATaGTGGAATCTTCCAATGAAT | + |
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Preference number: 4 (lower is better) Translates to: QYLQQKGFSPALQYYTDPSSTMR*WNLPMN Trigger: ATTCATTGGAAGATTCCAGCATCTCATTGTGCTAGA...TGGGTCCGTATAGTACTGTAAGGCAGGACTGAAGCCTTTCTGCTGTAAATACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CCA 90 bp | AACTGCCGTACCAGCTCATCCGTCATCGCAGGAAAAACATCATCAATGAAAGGAAGAATGTATAGAGCTTaGCATTTGAGTCAGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: NCRTSSSVIAGKTSSMKGRMYRA*HLSQTV Trigger: AACTGTCTGACTCAAATGCCAAGCTCTATACATTCT...TCCTTTCATTGATGATGTTTTTCCTGCGATGACGGATGAGCTGGTACGGCAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CCA 90 bp | GGAAAAACATCATCAATGAAAGGAAACATGAACGTGACGTTTGTCTTCCACAAACTCTTCCATCTTCCCTaGTCACCTTCTCTTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GKTSSMKGNMNVTFVFHKLFHLP*SPSLSA Trigger: AGCTGAAAGAGAAGGTGACCAGGGAAGATGGAAGAG...TTTGTGGAAGACAAACGTCACGTTCATGTTTCCTTTCATTGATGATGTTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR TCA 90 bp | TTGCAGATGTTGCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAGTTTTTCATATTTTTaGTTGTCTCTGGCAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: LQMLHYDVWLKPMLPVLRSFSYF*LSLAGM Trigger: CATGCCTGCCAGAGACAATCAAAAATATGAAAAACT...CCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGCAACATCTGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR GCA 90 bp | TTGCAGATGTTGCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGGTTATTTCATTCCTCTaGAGCCACAGTGTATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LQMLHYDVWLKPMLPVLRVISFL*SHSVCK Trigger: TTTACATACACTGTGGCTGCAGAGGAATGAAATAAC...CCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGCAACATCTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| 3UTR CAA 72 bp | CACATGATTGTGTTTGCAGATGTTGCATTACGATGTTaGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: HMIVFADVALRC*VETYAASFEEK Trigger: CTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGCAACATCTGCAAACACAATCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGGCAACGTGTGGAATGAGGACATCGTTGGAAGGCTCGGATGTTACTCCATCCTCTCCATCTGTGTaGTCGCTGGGAGGAAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: SWATCGMRTSLEGSDVTPSSPSV*SLGGSV Trigger: GACGCTTCCTCCCAGCGACAACACAGATGGAGAGGA...TGGAGTAACATCCGAGCCTTCCAACGATGTCCTCATTCCACACGTTGCCCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS GCA 90 bp | AACTTCGCATTCTGTCTAGTGAGTCAGGAAGCTGTTGCAGGCTGTTaGTTCCCATATCCAGCCACTCGAGGGCAGGCATGTCCAACACAG | + |
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Preference number: 5 (lower is better) Translates to: NFAFCLVSQEAVAGC*FPYPATRGQACPTQ Trigger: CTGTGTTGGACATGCCTGCCCTCGAGTGGCTGGATATGGGAAGCAACAGCCTGCAACAGCTTCCTGACTCACTAGACAGAATGCGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS GCA 90 bp | AGTGTATGTAAACTTCGCATTCTGTCTAGTGAGTCAGGAAGCTGTTaGAGGCTGTTGCTTCCCATATCCAGCCACTCGAGGGCAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: SVCKLRILSSESGSC*RLLLPISSHSRAGM Trigger: CATGCCTGCCCTCGAGTGGCTGGATATGGGAAGCAACAGCCTGCAACAGCTTCCTGACTCACTAGACAGAATGCGAAGTTTACATACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CAA 90 bp | AAAAGATGTCCCAGAGACATGGACCCCGGTGGCTGGCATTGTGATTGCGCTCTGCAGTTGCTCAGTTCTTaGGGGACAGTCTTGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: KRCPRDMDPGGWHCDCALQLLSS*GTVLIL Trigger: CAAAATCAAGACTGTCCCCAAAGAACTGAGCAACTG...CAGAGCGCAATCACAATGCCAGCCACCGGGGTCCATGTCTCTGGGACATCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS GCA 90 bp | CAGTTGACTTGGTCTTCTGTTCTCCGGGACTCTTGTATGTATGCGTaGATAAACTGCAGCCCAAATAACTCCTGTTCTTCCTCTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: QLTWSSVLRDSCMYA*INCSPNNSCSSSPS Trigger: AGATGGAGAGGAAGAACAGGAGTTATTTGGGCTGCAGTTTATGCACGCATACATACAAGAGTCCCGGAGAACAGAAGACCAAGTCAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CAA 90 bp | CAGTATTTACAGCAGAAAGGCTTCAGTCCTGCCTTACAGTACTATACGGACCCATCCAGTCTTAGTGGGTaGTCTCGGAAGTTGACAAAC | + |
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Preference number: 5 (lower is better) Translates to: QYLQQKGFSPALQYYTDPSSLSG*SRKLTN Trigger: GTTTGTCAACTTCCGAGACAACCCACTAAGACTGGA...TGGGTCCGTATAGTACTGTAAGGCAGGACTGAAGCCTTTCTGCTGTAAATACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CAA 90 bp | GCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTTTGAGGAAAAGGATGAATCCAAGCTGGTACAGTaGCTCAGTTCTTTGGGGACA | + |
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Preference number: 5 (lower is better) Translates to: ALRCLVETYAASFEEKDESKLVQ*LSSLGT Trigger: TGTCCCCAAAGAACTGAGCAACTGTACCAGCTTGGA...TTCATCCTTTTCCTCAAAACTGGCAGCATAGGTTTCAACCAAACATCGTAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CAA 90 bp | ACTCCAGTATTTACAGCAGAAAGGCTTCAGTCCTGCCTTACAGTACTATACGGATCTTGTAGTTTGTTGTaGCTGAGAACAAGAGTACCC | + |
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Preference number: 5 (lower is better) Translates to: TPVFTAERLQSCLTVLYGSCSLL*LRTRVP Trigger: GGGTACTCTTGTTCTCAGCAACAACAAACTACAAGA...TCCGTATAGTACTGTAAGGCAGGACTGAAGCCTTTCTGCTGTAAATACTGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CAA 90 bp | AAAGTAACACTTTGGCCAAGGAAGGAAGTGAAAAAGATGTCCCAGAGACATGGATATAGAGCTTGGCATTaGAGTCAGACAGTTGACTTG | + |
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Preference number: 5 (lower is better) Translates to: KVTLWPRKEVKKMSQRHGYRAWH*SQTVDL Trigger: CAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATA...TCCATGTCTCTGGGACATCTTTTTCACTTCCTTCCTTGGCCAAAGTGTTACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS GCA 90 bp | GGGATCTCTGAAATTGTGTTCCGAGATAAATCTAGCACAATGAGATaGTGGAATCTTCCAATGAATTCAGGAATCTTCAACAATCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: GISEIVFRDKSSTMR*WNLPMNSGIFNNPV Trigger: GACCGGATTGTTGAAGATTCCTGAATTCATTGGAAGATTCCAGCATCTCATTGTGCTAGATTTATCTCGGAACACAATTTCAGAGATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CAA 90 bp | AAGAAGAAAATAGGACATCTTTGTAAACTGCTGATTGACCAAGGCAGACTCCAGGGGGGATCTCTGAAATaGTGTTCCGAGATAAATCTA | + |
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Preference number: 5 (lower is better) Translates to: KKKIGHLCKLLIDQGRLQGGSLK*CSEINL Trigger: TAGATTTATCTCGGAACACAATTTCAGAGATCCCCC...CTGGAGTCTGCCTTGGTCAATCAGCAGTTTACAAAGATGTCCTATTTTCTTCTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS-3UTR CAA 90 bp | AAAGTAACACTTTGGCCAAGGAAGGAAGTGAAAAAGATGTCCCAGAGACATGGAGGGATATCTTGTAGTTaGTTGTTGCTGAGAACAAGA | + |
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Preference number: 5 (lower is better) Translates to: KVTLWPRKEVKKMSQRHGGISCS*LLLRTR Trigger: TCTTGTTCTCAGCAACAACAAACTACAAGATATCCC...TCCATGTCTCTGGGACATCTTTTTCACTTCCTTCCTTGGCCAAAGTGTTACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS GCA 90 bp | TTCATATTTTTGATTGTCTCTGGCAGGCATGTTATTTCATTCCTCTaGAGCCACAGTGTATGTAAACTTCGCATTCTGTCTAGTGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: FIFLIVSGRHVISFL*SHSVCKLRILSSES Trigger: TGACTCACTAGACAGAATGCGAAGTTTACATACACTGTGGCTGCAGAGGAATGAAATAACATGCCTGCCAGAGACAATCAAAAATATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 72 bp | ATTCTGTCTAGTGAGTCAGGAAGCTGTTGCAGGCTGTaGCTTCCCATATCCAGCCACTCGAGGGCAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: ILSSESGSCCRL*LPISSHSRAGM Trigger: CATGCCTGCCCTCGAGTGGCTGGATATGGGAAGCAACAGCCTGCAACAGCTTCCTGACTCACTAGACAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 90 bp | AAACTTCGCATTCTGTCTAGTGAGTCAGGAAGCTGTTGCAGGCTGTaGCTTCCCATATCCAGCCACTCGAGGGCAGGCATGTCCAACACA | + |
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Preference number: 6 (lower is better) Translates to: KLRILSSESGSCCRL*LPISSHSRAGMSNT Trigger: TGTGTTGGACATGCCTGCCCTCGAGTGGCTGGATATGGGAAGCAACAGCCTGCAACAGCTTCCTGACTCACTAGACAGAATGCGAAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS GCA 72 bp | AAACTTCGCATTCTGTCTAGTGAGTCAGGAAGCTGTTaGAGGCTGTTGCTTCCCATATCCAGCCACTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: KLRILSSESGSC*RLLLPISSHSR Trigger: CCTCGAGTGGCTGGATATGGGAAGCAACAGCCTGCAACAGCTTCCTGACTCACTAGACAGAATGCGAAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 72 bp | TCGCTGGGAGGAAGCGTCACCTCCAGTCTTAGTGGGTaGTCTCGGAAGTTGACAAACCTCAGATTCGTCATT | + |
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Preference number: 6 (lower is better) Translates to: SLGGSVTSSLSG*SRKLTNLRFVI Trigger: AATGACGAATCTGAGGTTTGTCAACTTCCGAGACAACCCACTAAGACTGGAGGTGACGCTTCCTCCCAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 90 bp | TCTGTGTTGTCGCTGGGAGGAAGCGTCACCTCCAGTCTTAGTGGGTaGTCTCGGAAGTTGACAAACCTCAGATTCGTCATTTCTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SVLSLGGSVTSSLSG*SRKLTNLRFVISSM Trigger: CATGGAAGAAATGACGAATCTGAGGTTTGTCAACTTCCGAGACAACCCACTAAGACTGGAGGTGACGCTTCCTCCCAGCGACAACACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS GCA 72 bp | GTTCTCCGGGACTCTTGTATGTATGCGTGCATAAACTaGAGCCCAAATAACTCCTGTTCTTCCTCTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: VLRDSCMYACIN*SPNNSCSSSPS Trigger: AGATGGAGAGGAAGAACAGGAGTTATTTGGGCTGCAGTTTATGCACGCATACATACAAGAGTCCCGGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 72 bp | TTCACAGCCAGTTCTAGCTTCTCCAAGCTGGTACAGTaGCTCAGTTCTTTGGGGACAGTCTTGATTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: FTASSSFSKLVQ*LSSLGTVLILL Trigger: CAACAAAATCAAGACTGTCCCCAAAGAACTGAGCAACTGTACCAGCTTGGAGAAGCTAGAACTGGCTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 72 bp | ATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTaGGTCTTCTGTTCTCCGGGACTCTTGTATGTATGC | + |
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Preference number: 6 (lower is better) Translates to: MYRAWHLSQTVD*VFCSPGLLYVC Trigger: GCATACATACAAGAGTCCCGGAGAACAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 90 bp | TCCATCAGAATGTATAGAGCTTGGCATTTGAGTCAGACAGTTGACTaGGTCTTCTGTTCTCCGGGACTCTTGTATGTATGCGTGCATAAA | + |
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Preference number: 6 (lower is better) Translates to: SIRMYRAWHLSQTVD*VFCSPGLLYVCVHK Trigger: TTTATGCACGCATACATACAAGAGTCCCGGAGAACAGAAGACCAAGTCAACTGTCTGACTCAAATGCCAAGCTCTATACATTCTGATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS TCA 72 bp | GGAGAGTCTTCCATTCTTCTTTCTCTATCCTTAAAATaGCTCTTCCATCTTCCCTGGTCACCTTCTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GESSILLSLSLK*LFHLPWSPSLS Trigger: TGAAAGAGAAGGTGACCAGGGAAGATGGAAGAGTCATTTTAAGGATAGAGAAAGAAGAATGGAAGACTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 90 bp | AGTTTGTTGTTGCTGAGAACAAGAGTACCCAAGTTTTTCATATTTTaGATTGTCTCTGGCAGGCATGTTATTTCATTCCTCTGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SLLLLRTRVPKFFIF*IVSGRHVISFLCSH Trigger: GTGGCTGCAGAGGAATGAAATAACATGCCTGCCAGAGACAATCAAAAATATGAAAAACTTGGGTACTCTTGTTCTCAGCAACAACAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 90 bp | CTCAGATTCGTCATTTCTTCCATGCAGCCTGGGATATCTTGTAGTTaGTTGTTGCTGAGAACAAGAGTACCCAAGTTTTTCATATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LRFVISSMQPGISCS*LLLRTRVPKFFIFL Trigger: CAAAAATATGAAAAACTTGGGTACTCTTGTTCTCAGCAACAACAAACTACAAGATATCCCAGGCTGCATGGAAGAAATGACGAATCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 72 bp | TCTTCCATGCAGCCTGGGATATCTTGTAGTTTGTTGTaGCTGAGAACAAGAGTACCCAAGTTTTTCATATTT | + |
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Preference number: 6 (lower is better) Translates to: SSMQPGISCSLL*LRTRVPKFFIF Trigger: AAATATGAAAAACTTGGGTACTCTTGTTCTCAGCAACAACAAACTACAAGATATCCCAGGCTGCATGGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 90 bp | TTCGTCATTTCTTCCATGCAGCCTGGGATATCTTGTAGTTTGTTGTaGCTGAGAACAAGAGTACCCAAGTTTTTCATATTTTTGATTGTC | + |
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Preference number: 6 (lower is better) Translates to: FVISSMQPGISCSLL*LRTRVPKFFIFLIV Trigger: GACAATCAAAAATATGAAAAACTTGGGTACTCTTGTTCTCAGCAACAACAAACTACAAGATATCCCAGGCTGCATGGAAGAAATGACGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS GCA 72 bp | GAAATTGTGTTCCGAGATAAATCTAGCACAATGAGATaGTGGAATCTTCCAATGAATTCAGGAATCTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: EIVFRDKSSTMR*WNLPMNSGIFN Trigger: GTTGAAGATTCCTGAATTCATTGGAAGATTCCAGCATCTCATTGTGCTAGATTTATCTCGGAACACAATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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| CDS CAA 90 bp | AGATTCGTCATTTCTTCCATGCAGCCTGGGATATCTTGTAGTTTGTaGTTGCTGAGAACAAGAGTACCCAAGTTTTTCATATTTTTGATT | + |
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Preference number: 6 (lower is better) Translates to: RFVISSMQPGISCSL*LLRTRVPKFFIFLI Trigger: AATCAAAAATATGAAAAACTTGGGTACTCTTGTTCTCAGCAACAACAAACTACAAGATATCCCAGGCTGCATGGAAGAAATGACGAATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029573.8 |
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