Pregenerated sensors for LRRC36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054320Ensembl transcript IDs: ENSMUST00000067305.8, ENSMUST00000109355.9, ENSMUST00000213547.2, ENSMUST00000216457.2, ENSMUST00000216765.2
Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACACCAGTACCCACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTaGGCGAGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAA | + |
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Preference number: 1 (lower is better) Translates to: NTSTHHRDSGPERPP*ARELVGRAAVLAPQ Trigger: TTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGTGGGTACTGGTGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| 3UTR TCA 90 bp | ATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTaGGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGCTGCGGT | + |
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Preference number: 1 (lower is better) Translates to: IFGGKHQYPPQGQRP*ASSVGEGAGGAGCG Trigger: ACCGCAGCCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| 3UTR TCA 90 bp | AAGCTTCGAGCGCCGCCACTGCTGAGAGGGTGCAGGGACCACCAATaGCAGGAGCAAGTCTCTGGCGGGACCGAGAAACTTCTTGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: KLRAPPLLRGCRDHQ*QEQVSGGTEKLLVQ Trigger: CTGGACAAGAAGTTTCTCGGTCCCGCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCACCCTCTCAGCAGTGGCGGCGCTCGAAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR GCA 90 bp | CCGAGAAACTTCTTGTCCAGGAGGAGGGAGCCAGAGCCATTCCAGTaGTTGTCCACCAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACG | + |
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Preference number: 1 (lower is better) Translates to: PRNFLSRRREPEPFQ*LSTSSRSCLRTVAT Trigger: CGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTGGTGGACAAGCACTGGAATGGCTCTGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CCA 90 bp | ACTGCTGAGAGGGTGCAGGGACCACCAATGACAGGAGCAAGTCTCTaGCGGGACCGAGAAACTTCTTGTCCAGGAGGAGGGAGCCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: TAERVQGPPMTGASL*RDRETSCPGGGSQS Trigger: GCTCTGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCCCGCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCACCCTCTCAGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CCA 90 bp | TGCTTGTCCACCAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACGTaGGGGGTTCTGGCAGAGATCGGAGGACTGTGGTTTCCTGATAAA | + |
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Preference number: 1 (lower is better) Translates to: CLSTSSRSCLRTVAT*GVLAEIGGLWFPDK Trigger: TTTATCAGGAAACCACAGTCCTCCGATCTCTGCCAGAACCCCCCACGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTGGTGGACAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR GCA 90 bp | GCTCCTGGGTCAGGCAAGCCACCTGTATGGTCAGCTGTTGGTTTTTaGGCAGAAGCTCATCGTGTGTGTGTGATGGGTGCCCACTCACAA | + |
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Preference number: 1 (lower is better) Translates to: APGSGKPPVWSAVGF*AEAHRVCVMGAHSQ Trigger: TTGTGAGTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAAAAACCAACAGCTGACCATACAGGTGGCTTGCCTGACCCAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR GCA 90 bp | GGTACTGACCCGTGTCGTGTACCATTGGTGAGGAGGAAGACAGCGTaGTTTTCCCAAAGGGCGACGATCTCCCCAAAGGATGACTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: GTDPCRVPLVRRKTA*FSQRATISPKDDSS Trigger: AGAAGAGTCATCCTTTGGGGAGATCGTCGCCCTTTGGGAAAAGCACGCTGTCTTCCTCCTCACCAATGGTACACGACACGGGTCAGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CCA 90 bp | GTCTTTTCAGCTGAGTCAGCTCCTGGGTCAGGCAAGCCACCTGTATaGTCAGCTGTTGGTTTTTGCGCAGAAGCTCATCGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: VFSAESAPGSGKPPV*SAVGFCAEAHRVCV Trigger: CACACACACACGATGAGCTTCTGCGCAAAAACCAACAGCTGACCATACAGGTGGCTTGCCTGACCCAGGAGCTGACTCAGCTGAAAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR TCA 90 bp | AAACTAGGCTCTGGGTCGGCTTCTGAGACACTCTGTATTAGGTACTaGCCCGTGTCGTGTACCATTGGTGAGGAGGAAGACAGCGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: KLGSGSASETLCIRY*PVSCTIGEEEDSVL Trigger: AAGCACGCTGTCTTCCTCCTCACCAATGGTACACGACACGGGTCAGTACCTAATACAGAGTGTCTCAGAAGCCGACCCAGAGCCTAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR TCA 90 bp | TGCAGCTGCTGCAGCAGATACTCATTAGTTACCACCAGGGACCTCTaGCTCTCATGGAGAAGAGCAACTGTCTCCTCCAGTCTTTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: CSCCSRYSLVTTRDL*LSWRRATVSSSLFS Trigger: GCTGAAAAGACTGGAGGAGACAGTTGCTCTTCTCCATGAGAGTCAGAGGTCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGAGCGCCGCCACTGCTaGGAGGGTGCAGGGACCACC | + |
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Preference number: 2 (lower is better) Translates to: HRDSGPERPPWARELVGRERRHC*EGAGTT Trigger: GGTGGTCCCTGCACCCTCTCAGCAGTGGCGGCGCTC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CAA 90 bp | AGAAACTTCTTGTCCAGGAGGAGGGAGCCAGAGCCATTCCAGTGCTaGTCCACCAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACGTGG | + |
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Preference number: 2 (lower is better) Translates to: RNFLSRRREPEPFQC*STSSRSCLRTVATW Trigger: CCACGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTGGTGGACAAGCACTGGAATGGCTCTGGCTCCCTCCTCCTGGACAAGAAGTTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CAA 90 bp | ACCACCAATGACAGGAGCAAGTCTCTGGCGGGACCGAGAAACTTCTaGTCCAGGAGGAGGGAGCCAGAGCCATTCCAGTGCTTGTCCACC | + |
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Preference number: 2 (lower is better) Translates to: TTNDRSKSLAGPRNF*SRRREPEPFQCLST Trigger: GGTGGACAAGCACTGGAATGGCTCTGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCCCGCCAGAGACTTGCTCCTGTCATTGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCGCAGAAGCTCATCGTGTGTGTGTGATGGGTGCCCACTCACAATCGAGGTGAGGACAGTGGCCACGTaGGGGGTTCTGGCAGAGATC | + |
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Preference number: 2 (lower is better) Translates to: LRRSSSCVCDGCPLTIEVRTVAT*GVLAEI Trigger: GATCTCTGCCAGAACCCCCCACGTGGCCACTGTCCT...CACCTCGATTGTGAGTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR TCA 90 bp | CTGACTCTCATGGAGAAGAGCAACTGTCTCCTCCAGTCTTTTCAGCTGAGTCAGGCTCCAGGAGCTGTCTaGGGACAGTGGCCACGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LTLMEKSNCLLQSFQLSQAPGAV*GQWPRG Trigger: CCCACGTGGCCACTGTCCTCAGACAGCTCCTGGAGC...CTGACTCAGCTGAAAAGACTGGAGGAGACAGTTGCTCTTCTCCATGAGAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTCAGGCAAGCCACCTGTATGGTCAGCTGTTGGTTTTTGCGCAGAAGCTCTGCAGGGACCACCAATaGCAGGAGCAAGTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LGQASHLYGQLLVFAQKLCRDHQ*QEQVSG Trigger: GCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCA...GAGCTTCTGCGCAAAAACCAACAGCTGACCATACAGGTGGCTTGCCTGACCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGTCTTTTCAGCTGAGTCAGCTCCTGGGTCAGGCAAGCCACCTGTATGGTCCAGAGCCATTCCAGTaGTTGTCCACCAGCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LQSFQLSQLLGQASHLYGPEPFQ*LSTSSR Trigger: CCTGGAGCTGGTGGACAAGCACTGGAATGGCTCTGG...ACCATACAGGTGGCTTGCCTGACCCAGGAGCTGACTCAGCTGAAAAGACTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CAA 90 bp | AGCTCCTGGGTCAGGCAAGCCACCTGTATGGTCAGCTGTTGGTTTTaGCGCAGAAGCTCATCGTGTGTGTGTGATGGGTGCCCACTCACA | + |
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Preference number: 2 (lower is better) Translates to: SSWVRQATCMVSCWF*RRSSSCVCDGCPLT Trigger: TGTGAGTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAAAAACCAACAGCTGACCATACAGGTGGCTTGCCTGACCCAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CAA 90 bp | CTTCTGAGACACTCTGTATTAGGTACTGACCCGTGTCGTGTACCATaGGTGAGGAGGAAGACAGCGTGCTTTTCCCAAAGGGCGACGATC | + |
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Preference number: 2 (lower is better) Translates to: LLRHSVLGTDPCRVP*VRRKTACFSQRATI Trigger: GATCGTCGCCCTTTGGGAAAAGCACGCTGTCTTCCTCCTCACCAATGGTACACGACACGGGTCAGTACCTAATACAGAGTGTCTCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGTTGGTTTTTGCGCAGAAGCTCATCGTGTGTGTGTGATGGGTGCCCACTTTCCTCCAGCACTTTaGCCAGTTTTTGCTTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: SAVGFCAEAHRVCVMGAHFPPAL*PVFASD Trigger: GTCTGAAGCAAAAACTGGTCAAAGTGCTGGAGGAAA...GTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAAAAACCAACAGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCTTCTGAGACACTCTGTATTAGGTACTGACCCGTGTCGTGTACCATTGGTGTCTTTATGCAGCTGCTaGAGCAGATACTCATTAGTT | + |
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Preference number: 2 (lower is better) Translates to: RLLRHSVLGTDPCRVPLVSLCSC*SRYSLV Trigger: AACTAATGAGTATCTGCTGCAGCAGCTGCATAAAGA...CACCAATGGTACACGACACGGGTCAGTACCTAATACAGAGTGTCTCAGAAGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR TCA 72 bp | GGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTaGGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCG | + |
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Preference number: 3 (lower is better) Translates to: GKHQYPPQGQRP*ASSVGEGAGGA Trigger: CGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| 3UTR TCA 72 bp | GCGCCGCCACTGCTGAGAGGGTGCAGGGACCACCAATaGCAGGAGCAAGTCTCTGGCGGGACCGAGAAACTT | + |
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Preference number: 3 (lower is better) Translates to: APPLLRGCRDHQ*QEQVSGGTEKL Trigger: AAGTTTCTCGGTCCCGCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCACCCTCTCAGCAGTGGCGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CCA 72 bp | AGGGTGCAGGGACCACCAATGACAGGAGCAAGTCTCTaGCGGGACCGAGAAACTTCTTGTCCAGGAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: RVQGPPMTGASL*RDRETSCPGGG Trigger: CCCTCCTCCTGGACAAGAAGTTTCTCGGTCCCGCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCCAAAGGGCGACGATCTCCCCAAAGGATGACTCTTCTCGGGAGGCAGGAGGACCGAGAAACTTCTaGTCCAGGAGGAGGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: FSQRATISPKDDSSREAGGPRNF*SRRREP Trigger: TGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCC...TCCTGCCTCCCGAGAAGAGTCATCCTTTGGGGAGATCGTCGCCCTTTGGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR GCA 72 bp | TTTTTGCGCAGAAGCTCATCGTGTGTGTGTGATGGGTaGCCACTCACAATCGAGGTGGCAGCGGTTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FLRRSSSCVCDG*PLTIEVAAVPS Trigger: GGAGGGAACCGCTGCCACCTCGATTGTGAGTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR CAA 90 bp | CGGCTTCTGAGACACTCTGTATTAGGTACTGACCCGTGTCGTGTACCATTGGTGGAGCCATTCCAGTGCTaGTCCACCAGCTCCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: RLLRHSVLGTDPCRVPLVEPFQC*STSSRS Trigger: GCTCCTGGAGCTGGTGGACAAGCACTGGAATGGCTC...CACCAATGGTACACGACACGGGTCAGTACCTAATACAGAGTGTCTCAGAAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR TCA 72 bp | CTGTTGGTTTTTGCGCAGAAGCTCATCGTGTGTGTGTaGTGGGTGCCCACTCACAATCGAGGTGGCAGCGGT | + |
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Preference number: 3 (lower is better) Translates to: LLVFAQKLIVCV*WVPTHNRGGSG Trigger: ACCGCTGCCACCTCGATTGTGAGTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAAAAACCAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR TCA 72 bp | GTGCTTTTCCCAAAGGGCGACGATCTCCCCAAAGGATaGCTCTTCTCGGGAGGCAGGAGAGATTTCCCGGAA | + |
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Preference number: 3 (lower is better) Translates to: VLFPKGDDLPKG*LFSGGRRDFPE Trigger: TTCCGGGAAATCTCTCCTGCCTCCCGAGAAGAGTCATCCTTTGGGGAGATCGTCGCCCTTTGGGAAAAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCCAAAGGGCGACGATCTCCCCAAAGGATGACTCTTCTCGGGAGGCAGGACTGTATGGTCAGCTGTaGGTTTTTGCGCAGAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: FSQRATISPKDDSSREAGLYGQL*VFAQKL Trigger: GAGCTTCTGCGCAAAAACCAACAGCTGACCATACAG...TCCTGCCTCCCGAGAAGAGTCATCCTTTGGGGAGATCGTCGCCCTTTGGGAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR TCA 72 bp | TCTGGGTCGGCTTCTGAGACACTCTGTATTAGGTACTaGCCCGTGTCGTGTACCATTGGTGAGGAGGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: SGSASETLCIRY*PVSCTIGEEED Trigger: GTCTTCCTCCTCACCAATGGTACACGACACGGGTCAGTACCTAATACAGAGTGTCTCAGAAGCCGACCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR CCA 72 bp | TCCTGGGTCAGGCAAGCCACCTGTATGGTCAGCTGTTaGTTTTTGCGCAGAAGCTCATCGTGTGTGTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: SWVRQATCMVSC*FLRRSSSCVCD Trigger: ATCACACACACACGATGAGCTTCTGCGCAAAAACCAACAGCTGACCATACAGGTGGCTTGCCTGACCCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| 3UTR TCA 72 bp | TGCAGCAGATACTCATTAGTTACCACCAGGGACCTCTaGCTCTCATGGAGAAGAGCAACTGTCTCCTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: CSRYSLVTTRDL*LSWRRATVSSS Trigger: ACTGGAGGAGACAGTTGCTCTTCTCCATGAGAGTCAGAGGTCCCTGGTGGTAACTAATGAGTATCTGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGAGCGCCGCCACTGCTaGGAGGGTGCAGGGACCACC | + |
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Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGERRHC*EGAGTT Trigger: GGTGGTCCCTGCACCCTCTCAGCAGTGGCGGCGCTC...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR TCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGCTCCAGGAGCTGTCTaGGGACAGTGGCCACGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGAPGAV*GQWPRG Trigger: CCCACGTGGCCACTGTCCTCAGACAGCTCCTGGAGC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGCAGCCTTCCCGTGCTaGAGTCGGGGTTTGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGAAFPC*SRGLTG Trigger: CCCTGTCAAACCCCGACTCCAGCACGGGAAGGCTGC...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGCTGTTGCTCCACGTTaGCCAGCAGAGCGGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRAVAPR*PAERGH Trigger: GTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGCTGTTGCTCCACGTTaGCCAGCAGAGCGGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGAVAPR*PAERGH Trigger: GTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGC...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGCAGCCTTCCCGTGCTaGAGTCGGGGTTTGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGAAFPC*SRGLTG Trigger: CCCTGTCAAACCCCGACTCCAGCACGGGAAGGCTGC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGAGGACAGTGGCCACGTaGGGGGTTCTGGCAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGRTVAT*GVLAEI Trigger: GATCTCTGCCAGAACCCCCCACGTGGCCACTGTCCT...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR TCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGATCTCCCCAAAGGATaGCTCTTCTCGGGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRDLPKG*LFSGGR Trigger: CCTGCCTCCCGAGAAGAGTCATCCTTTGGGGAGATC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 |
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| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGAGCTGGTGTGCCACTaGCCTGGGCTGCACAAATGC | + |
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Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGELVCH*PGLHKC Trigger: GCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCAGGACAGTGGCCACGTaGGGGGTTCTGGCAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGRTVAT*GVLAEI Trigger: GATCTCTGCCAGAACCCCCCACGTGGCCACTGTCCT...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR TCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCTGCAGGGACCACCAATaGCAGGAGCAAGTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGCRDHQ*QEQVSG Trigger: GCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCA...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGATCTCCCCAAAGGATaGCTCTTCTCGGGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGDLPKG*LFSGGR Trigger: CCTGCCTCCCGAGAAGAGTCATCCTTTGGGGAGATC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGTCGTGTACCATTGGTaGGGAGGAAGACAGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRVVYHW*GGRQRA Trigger: AGCACGCTGTCTTCCTCCTCACCAATGGTACACGAC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCCTGGAGATCGGACTGTaGTCTGAGGAGGCGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGLEIGL*SEEAGR Trigger: TCTACCCGCCTCCTCAGAGCACAGTCCGATCTCCAG...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAGGCTGGAAAGCTGTTaGTCCACGTTGGCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRRLESC*STLASR Trigger: TCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCT...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGTTCCTAGGGCAGGGCTaGTTGGGAAAGAACCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRFLGQG*LGKNQV Trigger: CACCTGGTTCTTTCCCAAGCAGCCCTGCCCTAGGAA...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGTTCCTAGGGCAGGGCTaGTTGGGAAAGAACCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGFLGQG*LGKNQV Trigger: CACCTGGTTCTTTCCCAAGCAGCCCTGCCCTAGGAA...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCCCAGAGCCATTCCAGTaGTTGTCCACCAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGPEPFQ*LSTSSR Trigger: CCTGGAGCTGGTGGACAAGCACTGGAATGGCTCTGG...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAGGAGGAAGACAGCGTaGTTTTCCCAAAGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRRRKTA*FSQRAT Trigger: CGTCGCCCTTTGGGAAAAGCACGCTGTCTTCCTCCT...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGTGTTGCCCAACTGACTaGAATGTAGCTTGGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRCCPTD*NVAWPL Trigger: GAGCGGCCAAGCTACATTTCAGTCAGTTGGGCAACA...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGTGTTGCCCAACTGACTaGAATGTAGCTTGGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGCCPTD*NVAWPL Trigger: GAGCGGCCAAGCTACATTTCAGTCAGTTGGGCAACA...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGAGCGGGGTCACTGTTaGAATGGGTTGTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGERGHC*NGLWHR Trigger: TCTATGCCACAACCCATTTCAACAGTGACCCCGCTC...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGCTTCTTGTTGCTTCCTaGATCTGTGTCCCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRLLVAS*ICVPSG Trigger: TCCGCTGGGGACACAGATGCAGGAAGCAACAAGAAG...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCTTCCTAGGGCAGGGCTaGTTGGGAAAGAACCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGFLGQG*LGKNQV Trigger: CACCTGGTTCTTTCCCAAGCAGCCCTGCCCTAGGAA...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCAGGAGGAAGACAGCGTaGTTTTCCCAAAGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGRRKTA*FSQRAT Trigger: CGTCGCCCTTTGGGAAAAGCACGCTGTCTTCCTCCT...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAAAACGTCTAATTTCTaGGCTGGTGTGCCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRKTSNF*AGVPLP Trigger: GGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTT...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCCTTCTTGTTGCTTCCTaGATCTGTGTCCCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGLLVAS*ICVPSG Trigger: TCCGCTGGGGACACAGATGCAGGAAGCAACAAGAAG...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGTGTCTCCCTTCTTGTTaGTTCCTGCATCTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRCLPSC*FLHLCP Trigger: GGGACACAGATGCAGGAAGCAACAAGAAGGGAGACA...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGTCTCGTCATCTTCTCTaGAGATCGGACTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRSRHLL*RSDCAL Trigger: CAGAGCACAGTCCGATCTCCAGAGAAGATGACGAGA...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGTCTCGTCATCTTCTCTaGAGATCGGACTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGSRHLL*RSDCAL Trigger: CAGAGCACAGTCCGATCTCCAGAGAAGATGACGAGA...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAGGGATGGGATGTGGTaGCCTTTTTGTCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRRDGMW*PFCPVK Trigger: CTTCACAGGACAAAAAGGCCACCACATCCCATCCCT...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAAGTCTCCACAGGGATaGGATGTGGTGGCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRKSPQG*DVVAFL Trigger: CAAAAAGGCCACCACATCCCATCCCTGTGGAGACTT...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGAAGTCTCCACAGGGATaGGATGTGGTGGCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGKSPQG*DVVAFL Trigger: CAAAAAGGCCACCACATCCCATCCCTGTGGAGACTT...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGCAGCCTTCCCGTGCTaGAGTCGGGGTTTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RELVGRAAVLAPQTRLWVAAFPC*SRGLTG Trigger: CCCTGTCAAACCCCGACTCCAGCACGGGAAGGCTGC...GACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGCTGTTGCTCCACGTTaGCCAGCAGAGCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RELVGRAAVLAPQTRLWVAVAPR*PAERGH Trigger: GTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGC...GACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCAATCTCCCTGTTTTCTaGAGTCCCAGGAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGNLPVF*SPRRQQ Trigger: CTGCTGCCTCCTGGGACTCCAGAAAACAGGGAGATT...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGCAAAGGATGACTCTCTaGCTCTCATGGAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGQRMTL*LSWRRA Trigger: TGCTCTTCTCCATGAGAGTCAGAGAGTCATCCTTTG...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
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| CDS-3UTR GCA 90 bp | GCGAGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGATTTCTGAGCTGGTGTaGCACTGCCCTGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARELVGRAAVLAPQTRLWISELV*HCPGLH Trigger: GTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAAT...CCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGCATCATGGGTACATaGATAGGCATCAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRGIMGT*IGIRFW Trigger: CCAAAACCTGATGCCTATCCATGTACCCATGATGCC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGGCATCATGGGTACATaGATAGGCATCAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGTAALSVLRGRGSWWGGGIMGT*IGIRFW Trigger: CCAAAACCTGATGCCTATCCATGTACCCATGATGCC...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCAGGGATGGGATGTGGTaGCCTTTTTGTCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGRDGMW*PFCPVK Trigger: CTTCACAGGACAAAAAGGCCACCACATCCCATCCCT...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGAAAGAACCAGGTGCTaGTGTAAAGTCACGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGERTRC*CKVTEA Trigger: AGCCTCCGTGACTTTACACCAGCACCTGGTTCTTTC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGCAAGCCACCTGTATaGTCAGCTGTTGGTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGGKPPV*SAVGFC Trigger: GCAAAAACCAACAGCTGACCATACAGGTGGCTTGCC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCAGTTCATCTTCCTGGTaGAGGTCACTTGTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGSSSSW*RSLVSL Trigger: AAGGGAGACAAGTGACCTTCACCAGGAAGATGAACT...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGCCTTTTTGTCCTGTaGAGGCTTTATGCTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRGLFVL*RLYAMF Trigger: GAACATAGCATAAAGCCTTCACAGGACAAAAAGGCC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGTTTCCTCCAGCACTTTaGCCAGTTTTTGCTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRFPPAL*PVFASD Trigger: GTCTGAAGCAAAAACTGGTCAAAGTGCTGGAGGAAA...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCTCAGCTGTTGGTTTTTaGGCAGAAGCTCATCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGSAVGF*AEAHRV Trigger: CACACGATGAGCTTCTGCGCAAAAACCAACAGCTGA...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | GCGAGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGAGGAGGAAGACAGCGTaGTTTTCCCAAAGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: ARELVGRAAVLAPQTRLWRRKTA*FSQRAT Trigger: CGTCGCCCTTTGGGAAAAGCACGCTGTCTTCCTCCT...CCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCTCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTTCGTCGTGTACCATTGGTaGGGAGGAAGACAGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVGRAAVLAPQTRLWVGFVVYHW*GGRQRA Trigger: AGCACGCTGTCTTCCTCCTCACCAATGGTACACGAC...GAAGCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGTCAAATCTAGTTCTTTaGGGAAGGGTAAGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRSNLVL*GRVRAV Trigger: TACAGCCCTTACCCTTCCTCAAAGAACTAGATTTGA...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAAAAAGTCCTTTGTTTaGGTCTGTTTCCATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRKKSFV*VCFHPG Trigger: GCCAGGATGGAAACAGACGCAAACAAAGGACTTTTT...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTTCAGGCTGGAAAGCTGTTaGTCCACGTTGGCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVGRAAVLAPQTRLWVGFRLESC*STLASR Trigger: TCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCT...GAAGCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTTCTCACTAGAGAGAGGTTaGGCCTCGCTGCCTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVGRAAVLAPQTRLWVGFSLERG*ASLPVA Trigger: TGCTACAGGCAGCGAGGCGCAACCTCTCTCTAGTGA...GAAGCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGATGGGTGCCCACTCACAATCGAGGTGGCAGCGGTTCCCTCCAACTGCGCTGTTGCTCCACGTTaGCCAGCAGAGCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCDGCPLTIEVAAVPSNCAVAPR*PAERGH Trigger: GTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGC...GCAGTTGGAGGGAACCGCTGCCACCTCGATTGTGAGTGGGCACCCATCACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTTCGAGCGGGGTCACTGTTaGAATGGGTTGTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVGRAAVLAPQTRLWVGFERGHC*NGLWHR Trigger: TCTATGCCACAACCCATTTCAACAGTGACCCCGCTC...GAAGCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTGTCTCCCTTCTTGTTaGTTCCTGCATCTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELVGRAAVLAPQTRLWVGCLPSC*FLHLCP Trigger: GGGACACAGATGCAGGAAGCAACAAGAAGGGAGACA...GCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCTTTCCTGATAAACCATaGAAACTGCCCAGGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGFPDKP*KLPRSL Trigger: TAGTGACCTGGGCAGTTTGCATGGTTTATCAGGAAA...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCTGCTCTTTATGCAGCTaGTGCAGCAGATACTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGCSLCS*CSRYSL Trigger: TAATGAGTATCTGCTGCAGCAGCTGCATAAAGAGCA...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTCTCGTCATCTTCTCTaGAGATCGGACTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELVGRAAVLAPQTRLWVGSRHLL*RSDCAL Trigger: CAGAGCACAGTCCGATCTCCAGAGAAGATGACGAGA...GCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | GCGAGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGAAGTCTCCACAGGGATaGGATGTGGTGGCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARELVGRAAVLAPQTRLWKSPQG*DVVAFL Trigger: CAAAAAGGCCACCACATCCCATCCCTGTGGAGACTT...CCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCTCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | GCGAGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGAGTTCATCTTCCTGGTaGAGGTCACTTGTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARELVGRAAVLAPQTRLWSSSSW*RSLVSL Trigger: AAGGGAGACAAGTGACCTTCACCAGGAAGATGAACT...CCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGAGCGCCGCCACTGCTaGGAGGGTGCAGGGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPERRHC*EGAGTT Trigger: GGTGGTCCCTGCACCCTCTCAGCAGTGGCGGCGCTC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTTCGATCTCCCCAAAGGATaGCTCTCTGACTCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVGRAAVLAPQTRLWVGFDLPKG*LSDSHG Trigger: TCCATGAGAGTCAGAGAGTCATCCTTTGGGGAGATC...GAAGCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTCAGCTGTTGGTTTTTaGGCAGAAGCTCATCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELVGRAAVLAPQTRLWVGSAVGF*AEAHRV Trigger: CACACGATGAGCTTCTGCGCAAAAACCAACAGCTGA...GCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCTCTTTATGCAGCTGCTaGAGCAGATACTCATTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTGTAALSVLRGRGSWWGSLCSC*SRYSLV Trigger: AACTAATGAGTATCTGCTGCAGCAGCTGCATAAAGA...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCAAGCCACCTGTATaGTCAGCTGTTGGTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RELVGRAAVLAPQTRLWVGKPPV*SAVGFC Trigger: GCAAAAACCAACAGCTGACCATACAGGTGGCTTGCC...GACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAGTGAGCATAAATACTaGATTCCCTTTAGACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRDSGPERPPWARELVGRSEHKY*IPFRLV Trigger: CACTAGTCTAAAGGGAATCCAGTATTTATGCTCACT...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| 3UTR CAA 72 bp | GACAGGAGCAAGTCTCTGGCGGGACCGAGAAACTTCTaGTCCAGGAGGAGGGAGCCAGAGCCATTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DRSKSLAGPRNF*SRRREPEPFQC Trigger: GCACTGGAATGGCTCTGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCCCGCCAGAGACTTGCTCCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCAAGTCTCTGGCGGGACCGAGAAACTTCTTGTCCAGGAGGAGGGAGCCAGGCTGGAAAGCTGTTaGTCCACGTTGGCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEQVSGGTEKLLVQEEGARLESC*STLASR Trigger: TCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCT...GGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCCCGCCAGAGACTTGCTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCAGGCAAGCCACCTGTATGGTCAGCTGTTGGTTTTTGCGCAGAAGCTCGCAGCCTTCCCGTGCTaGAGTCGGGGTTTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQASHLYGQLLVFAQKLAAFPC*SRGLTG Trigger: CCCTGTCAAACCCCGACTCCAGCACGGGAAGGCTGC...GAGCTTCTGCGCAAAAACCAACAGCTGACCATACAGGTGGCTTGCCTGACCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGCTTCGGCCTTTTTGTCCTGTaGAGGCTTTATGCTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVGRAAVLAPQTRLWVGFGLFVL*RLYAMF Trigger: GAACATAGCATAAAGCCTTCACAGGACAAAAAGGCC...GAAGCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | GCGAGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGAAAAAGTCCTTTGTTTaGGTCTGTTTCCATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARELVGRAAVLAPQTRLWKKSFV*VCFHPG Trigger: GCCAGGATGGAAACAGACGCAAACAAAGGACTTTTT...CCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGCTCCAGGAGCTGTCTaGGGACAGTGGCCACGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRAPGAV*GQWPRG Trigger: CCCACGTGGCCACTGTCCTCAGACAGCTCCTGGAGC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGCTGTTGCTCCACGTTaGCCAGCAGAGCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPAVAPR*PAERGH Trigger: GTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGAGCTGGTGTGCCACTaGCCTGGGCTGCACAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPELVCH*PGLHKC Trigger: GCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGCAGCCTTCCCGTGCTaGAGTCGGGGTTTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRAAFPC*SRGLTG Trigger: CCCTGTCAAACCCCGACTCCAGCACGGGAAGGCTGC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCAGGACAGTGGCCACGTaGGGGGTTCTGGCAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPRTVAT*GVLAEI Trigger: GATCTCTGCCAGAACCCCCCACGTGGCCACTGTCCT...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTGCAGGGACCACCAATaGCAGGAGCAAGTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPCRDHQ*QEQVSG Trigger: GCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCA...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAGAGCGCCGCCACTGCTaGGAGGGTGCAGGGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGERRHC*EGAGTT Trigger: GGTGGTCCCTGCACCCTCTCAGCAGTGGCGGCGCTC...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR GCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGAGCTGGTGTGCCACTaGCCTGGGCTGCACAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRELVCH*PGLHKC Trigger: GCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCATTTCTGAGCTGGTGTaGCACTGCCCTGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPISELV*HCPGLH Trigger: GTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAAT...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGTCTTTTCAGCTGAGTCAGCTCCTGGGTCAGGCAAGCCACCTGTATGGAGGGATGGGATGTGGTaGCCTTTTTGTCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPVFSAESAPGSGKPPVWRDGMW*PFCPVK Trigger: CTTCACAGGACAAAAAGGCCACCACATCCCATCCCT...CCATACAGGTGGCTTGCCTGACCCAGGAGCTGACTCAGCTGAAAAGACTGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR CCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGAGGACAGTGGCCACGTaGGGGGTTCTGGCAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRRTVAT*GVLAEI Trigger: GATCTCTGCCAGAACCCCCCACGTGGCCACTGTCCT...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| 3UTR CAA 72 bp | GTCAGGCAAGCCACCTGTATGGTCAGCTGTTGGTTTTaGCGCAGAAGCTCATCGTGTGTGTGTGATGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRQATCMVSCWF*RRSSSCVCDGC Trigger: GCACCCATCACACACACACGATGAGCTTCTGCGCAAAAACCAACAGCTGACCATACAGGTGGCTTGCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGTCGTGTACCATTGGTaGGGAGGAAGACAGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPVVYHW*GGRQRA Trigger: AGCACGCTGTCTTCCTCCTCACCAATGGTACACGAC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGATTTCTGAGCTGGTGTaGCACTGCCCTGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRISELV*HCPGLH Trigger: GTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAAT...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | TTGCGCAGAAGCTCATCGTGTGTGTGTGATGGGTGCCCACTCACAATCGAGGTGTGTCTCCCTTCTTGTTaGTTCCTGCATCTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRRSSSCVCDGCPLTIEVCLPSC*FLHLCP Trigger: GGGACACAGATGCAGGAAGCAACAAGAAGGGAGACA...CACCTCGATTGTGAGTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCTGGAGATCGGACTGTaGTCTGAGGAGGCGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRLEIGL*SEEAGR Trigger: TCTACCCGCCTCCTCAGAGCACAGTCCGATCTCCAG...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTCACTAGAGAGAGGTTaGGCCTCGCTGCCTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPSLERG*ASLPVA Trigger: TGCTACAGGCAGCGAGGCGCAACCTCTCTCTAGTGA...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCAGAGCCATTCCAGTaGTTGTCCACCAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRPEPFQ*LSTSSR Trigger: CCTGGAGCTGGTGGACAAGCACTGGAATGGCTCTGG...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCAGGAGGAAGACAGCGTaGTTTTCCCAAAGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPRRKTA*FSQRAT Trigger: CGTCGCCCTTTGGGAAAAGCACGCTGTCTTCCTCCT...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGCGCAGAAGCTCATCGTGTGTGTGTGATGGGTGCCCACTCACAATCGAGGAATCTCCCTGTTTTCTaGAGTCCCAGGAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FCAEAHRVCVMGAHSQSRNLPVF*SPRRQQ Trigger: CTGCTGCCTCCTGGGACTCCAGAAAACAGGGAGATT...CCTCGATTGTGAGTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTGTTGCCCAACTGACTaGAATGTAGCTTGGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPCCPTD*NVAWPL Trigger: GAGCGGCCAAGCTACATTTCAGTCAGTTGGGCAACA...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCAGGCAAGCCACCTGTATGGTCAGCTGTTGGTTTTTGCGCAGAAGCTCACCTCAGAAGGTAACTaGCAGGGAAGGATCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGQASHLYGQLLVFAQKLTSEGN*QGRIWL Trigger: TAACCAGATCCTTCCCTGTCAGTTACCTTCTGAGGT...GAGCTTCTGCGCAAAAACCAACAGCTGACCATACAGGTGGCTTGCCTGACCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR TCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAGCTCCAGGAGCTGTCTaGGGACAGTGGCCACGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGAPGAV*GQWPRG Trigger: CCCACGTGGCCACTGTCCTCAGACAGCTCCTGGAGC...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCCTTCTTGTTGCTTCCTaGATCTGTGTCCCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPLLVAS*ICVPSG Trigger: TCCGCTGGGGACACAGATGCAGGAAGCAACAAGAAG...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CTCATTAGTTACCACCAGGGACCTCTGACTCTCATGGAGAAGAGCAACTGTCTCTTCCTAGGGCAGGGCTaGTTGGGAAAGAACCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LISYHQGPLTLMEKSNCLFLGQG*LGKNQV Trigger: CACCTGGTTCTTTCCCAAGCAGCCCTGCCCTAGGAA...GAGACAGTTGCTCTTCTCCATGAGAGTCAGAGGTCCCTGGTGGTAACTAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGTCACTAGAGAGAGGTTaGGCCTCGCTGCCTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRSLERG*ASLPVA Trigger: TGCTACAGGCAGCGAGGCGCAACCTCTCTCTAGTGA...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTTGGTTTTTGCGCAGAAGCTCATCGTGTGTGTGTGATGGGTGCCCACTCTCGTCATCTTCTCTaGAGATCGGACTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAVGFCAEAHRVCVMGAHSRHLL*RSDCAL Trigger: CAGAGCACAGTCCGATCTCCAGAGAAGATGACGAGA...GTGGGCACCCATCACACACACACGATGAGCTTCTGCGCAAAAACCAACAGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCAATCTCCCTGTTTTCTaGAGTCCCAGGAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPNLPVF*SPRRQQ Trigger: CTGCTGCCTCCTGGGACTCCAGAAAACAGGGAGATT...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGAGCGGGGTCACTGTTaGAATGGGTTGTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRERGHC*NGLWHR Trigger: TCTATGCCACAACCCATTTCAACAGTGACCCCGCTC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCTTCTTGTTGCTTCCTaGATCTGTGTCCCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRLLVAS*ICVPSG Trigger: TCCGCTGGGGACACAGATGCAGGAAGCAACAAGAAG...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGAAAGAACCAGGTGCTaGTGTAAAGTCACGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPERTRC*CKVTEA Trigger: AGCCTCCGTGACTTTACACCAGCACCTGGTTCTTTC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGGCAAGCCACCTGTATaGTCAGCTGTTGGTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPGKPPV*SAVGFC Trigger: GCAAAAACCAACAGCTGACCATACAGGTGGCTTGCC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| 3UTR CAA 72 bp | CACTCTGTATTAGGTACTGACCCGTGTCGTGTACCATaGGTGAGGAGGAAGACAGCGTGCTTTTCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSVLGTDPCRVP*VRRKTACFSQR Trigger: CCTTTGGGAAAAGCACGCTGTCTTCCTCCTCACCAATGGTACACGACACGGGTCAGTACCTAATACAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR TCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAGCTCCAGGAGCTGTCTaGGGACAGTGGCCACGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPAPGAV*GQWPRG Trigger: CCCACGTGGCCACTGTCCTCAGACAGCTCCTGGAGC...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCATAAGATCCCTGCAATaGGAGAGACTCCACCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPIRSLQ*ERLHQF Trigger: GAACTGGTGGAGTCTCTCTCATTGCAGGGATCTTAT...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCAATCCATCTTCCTGGTaGAGGTCACTTGTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPNPSSW*RSLVSL Trigger: AAGGGAGACAAGTGACCTTCACCAGGAAGATGGATT...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAGAGCTGGTGTGCCACTaGCCTGGGCTGCACAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGELVCH*PGLHKC Trigger: GCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTC...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCTGGAGATCGGACTGTaGTCTGAGGAGGCGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQLEIGL*SEEAGR Trigger: TCTACCCGCCTCCTCAGAGCACAGTCCGATCTCCAG...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGAGGGATGGGATGTGGTaGCCTTTTTGTCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRRDGMW*PFCPVK Trigger: CTTCACAGGACAAAAAGGCCACCACATCCCATCCCT...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGACCTCAGAAGGTAACTaGCAGGGAAGGATCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRTSEGN*QGRIWL Trigger: TAACCAGATCCTTCCCTGTCAGTTACCTTCTGAGGT...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGATGCAGGGACCACCAATaGCAGGAGCAAGTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGCRDHQ*QEQVSG Trigger: GCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCA...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTTTCCTCCAGCACTTTaGCCAGTTTTTGCTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPFPPAL*PVFASD Trigger: GTCTGAAGCAAAAACTGGTCAAAGTGCTGGAGGAAA...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAGATCTCCCCAAAGGATaGCTCTTCTCGGGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGDLPKG*LFSGGR Trigger: CCTGCCTCCCGAGAAGAGTCATCCTTTGGGGAGATC...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 |
||
| CDS-3UTR GCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGAGGCTGGAAAGCTGTTaGTCCACGTTGGCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQRLESC*STLASR Trigger: TCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCT...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGTTCCTAGGGCAGGGCTaGTTGGGAAAGAACCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQFLGQG*LGKNQV Trigger: CACCTGGTTCTTTCCCAAGCAGCCCTGCCCTAGGAA...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACCAGAGCCATTCCAGTaGTTGTCCACCAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGPEPFQ*LSTSSR Trigger: CCTGGAGCTGGTGGACAAGCACTGGAATGGCTCTGG...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGGCATCATGGGTACATaGATAGGCATCAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRGIMGT*IGIRFW Trigger: CCAAAACCTGATGCCTATCCATGTACCCATGATGCC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGGCCTTTTTGTCCTGTaGAGGCTTTATGCTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRGLFVL*RLYAMF Trigger: GAACATAGCATAAAGCCTTCACAGGACAAAAAGGCC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGGAGCGGGGTCACTGTTaGAATGGGTTGTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQERGHC*NGLWHR Trigger: TCTATGCCACAACCCATTTCAACAGTGACCCCGCTC...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGTGCAGGGACCACCAATaGCAGGAGCAAGTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQCRDHQ*QEQVSG Trigger: GCCAGAGACTTGCTCCTGTCATTGGTGGTCCCTGCA...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR TCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGTTTCCTCCAGCACTTTaGCCAGTTTTTGCTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRFPPAL*PVFASD Trigger: GTCTGAAGCAAAAACTGGTCAAAGTGCTGGAGGAAA...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTGCTCTTTATGCAGCTaGTGCAGCAGATACTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPCSLCS*CSRYSL Trigger: TAATGAGTATCTGCTGCAGCAGCTGCATAAAGAGCA...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 |
||
| CDS-3UTR TCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGAAAACGTCTAATTTCTaGGCTGGTGTGCCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQKTSNF*AGVPLP Trigger: GGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTT...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGAGGCTGGAAAGCTGTTaGTCCACGTTGGCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQRLESC*STLASR Trigger: TCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCT...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTCTTTATGCAGCTGCTaGAGCAGATACTCATTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPSLCSC*SRYSLV Trigger: AACTAATGAGTATCTGCTGCAGCAGCTGCATAAAGA...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 |
||
| CDS-3UTR CCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGGAAAGAACCAGGTGCTaGTGTAAAGTCACGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQERTRC*CKVTEA Trigger: AGCCTCCGTGACTTTACACCAGCACCTGGTTCTTTC...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAAATCTCCCTGTTTTCTaGAGTCCCAGGAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGNLPVF*SPRRQQ Trigger: CTGCTGCCTCCTGGGACTCCAGAAAACAGGGAGATT...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGACCTCAGAAGGTAACTaGCAGGGAAGGATCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQTSEGN*QGRIWL Trigger: TAACCAGATCCTTCCCTGTCAGTTACCTTCTGAGGT...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGAATCCATCTTCCTGGTaGAGGTCACTTGTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQNPSSW*RSLVSL Trigger: AAGGGAGACAAGTGACCTTCACCAGGAAGATGGATT...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGCTTCTTGTTGCTTCCTaGATCTGTGTCCCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQLLVAS*ICVPSG Trigger: TCCGCTGGGGACACAGATGCAGGAAGCAACAAGAAG...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGATGTCTCCCTTCTTGTTaGTTCCTGCATCTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGCLPSC*FLHLCP Trigger: GGGACACAGATGCAGGAAGCAACAAGAAGGGAGACA...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCATCACTAGAGAGAGGTTaGGCCTCGCTGCCTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPSLERG*ASLPVA Trigger: TGCTACAGGCAGCGAGGCGCAACCTCTCTCTAGTGA...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR GCA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGTCTTTATGCAGCTGCTaGAGCAGATACTCATTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRSLCSC*SRYSLV Trigger: AACTAATGAGTATCTGCTGCAGCAGCTGCATAAAGA...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 |
||
| CDS-3UTR CCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAAAGTCTCCACAGGGATaGGATGTGGTGGCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGKSPQG*DVVAFL Trigger: CAAAAAGGCCACCACATCCCATCCCTGTGGAGACTT...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCATGTTGCCCAACTGACTaGAATGTAGCTTGGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPCCPTD*NVAWPL Trigger: GAGCGGCCAAGCTACATTTCAGTCAGTTGGGCAACA...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR TCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGTCACTGTTGCCCAACTaGCTGAAATGTAGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQSLLPN*LKCSLA Trigger: GGCCAAGCTACATTTCAGTCAGTTGGGCAACAGTGA...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR TCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGAAAACGTCTAATTTCTaGGCTGGTGTGCCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQKTSNF*AGVPLP Trigger: GGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTT...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR TCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAAGTTCATCTTCCTGGTaGAGGTCACTTGTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGSSSSW*RSLVSL Trigger: AAGGGAGACAAGTGACCTTCACCAGGAAGATGAACT...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGGGCCTTTTTGTCCTGTaGAGGCTTTATGCTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQGLFVL*RLYAMF Trigger: GAACATAGCATAAAGCCTTCACAGGACAAAAAGGCC...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAATAAGATCCCTGCAATaGGAGAGACTCCACCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGIRSLQ*ERLHQF Trigger: GAACTGGTGGAGTCTCTCTCATTGCAGGGATCTTAT...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGCAAGCCACCTGTATaGTCAGCTGTTGGTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQGKPPV*SAVGFC Trigger: GCAAAAACCAACAGCTGACCATACAGGTGGCTTGCC...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR TCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAGGCCTTTTTGTCCTGTaGAGGCTTTATGCTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGGLFVL*RLYAMF Trigger: GAACATAGCATAAAGCCTTCACAGGACAAAAAGGCC...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR TCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGTCAAATCTAGTTCTTTaGGGAAGGGTAAGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQSNLVL*GRVRAV Trigger: TACAGCCCTTACCCTTCCTCAAAGAACTAGATTTGA...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCATGTCTCCCTTCTTGTTaGTTCCTGCATCTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPCLPSC*FLHLCP Trigger: GGGACACAGATGCAGGAAGCAACAAGAAGGGAGACA...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGTTTCCTGATAAACCATaGAAACTGCCCAGGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQFPDKP*KLPRSL Trigger: TAGTGACCTGGGCAGTTTGCATGGTTTATCAGGAAA...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGTCAGCTGTTGGTTTTTaGGCAGAAGCTCATCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQSAVGF*AEAHRV Trigger: CACACGATGAGCTTCTGCGCAAAAACCAACAGCTGA...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAAGGGATGGGATGTGGTaGCCTTTTTGTCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPRDGMW*PFCPVK Trigger: CTTCACAGGACAAAAAGGCCACCACATCCCATCCCT...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAGAAAGAACCAGGTGCTaGTGTAAAGTCACGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPERTRC*CKVTEA Trigger: AGCCTCCGTGACTTTACACCAGCACCTGGTTCTTTC...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR TCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAACCTCAGAAGGTAACTaGCAGGGAAGGATCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPTSEGN*QGRIWL Trigger: TAACCAGATCCTTCCCTGTCAGTTACCTTCTGAGGT...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR TCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAATAAGATCCCTGCAATaGGAGAGACTCCACCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPIRSLQ*ERLHQF Trigger: GAACTGGTGGAGTCTCTCTCATTGCAGGGATCTTAT...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109355.9 |
||
| CDS-3UTR TCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGATCAAATCTAGTTCTTTaGGGAAGGGTAAGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGSNLVL*GRVRAV Trigger: TACAGCCCTTACCCTTCCTCAAAGAACTAGATTTGA...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAAAAAAGTCCTTTGTTTaGGTCTGTTTCCATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGKKSFV*VCFHPG Trigger: GCCAGGATGGAAACAGACGCAAACAAAGGACTTTTT...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR GCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACCTGGGCTGCACAAATaGTGGTTAGGGAATCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPPGLHK*WLGNPL Trigger: TAAAGGATTCCCTAACCAGCATTTGTGCAGCCCAGG...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR GCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGATTTCCTGATAAACCATaGAAACTGCCCAGGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGFPDKP*KLPRSL Trigger: TAGTGACCTGGGCAGTTTGCATGGTTTATCAGGAAA...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAGGCATCATGGGTACATaGATAGGCATCAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPGIMGT*IGIRFW Trigger: CCAAAACCTGATGCCTATCCATGTACCCATGATGCC...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR GCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGAAAAAGTCCTTTGTTTaGGTCTGTTTCCATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQKKSFV*VCFHPG Trigger: GCCAGGATGGAAACAGACGCAAACAAAGGACTTTTT...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR GCA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGTTTCCTGATAAACCATaGAAACTGCCCAGGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQFPDKP*KLPRSL Trigger: TAGTGACCTGGGCAGTTTGCATGGTTTATCAGGAAA...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR GCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCATGCTCTTTATGCAGCTaGTGCAGCAGATACTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPCSLCS*CSRYSL Trigger: TAATGAGTATCTGCTGCAGCAGCTGCATAAAGAGCA...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR CCA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAAGTGAGCATAAATACTaGATTCCCTTTAGACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGSEHKY*IPFRLV Trigger: CACTAGTCTAAAGGGAATCCAGTATTTATGCTCACT...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAATAGGCATCAGGTTTTaGTATCAAGTCCTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPIGIRF*YQVLFW Trigger: CCAGAAAAGGACTTGATACCAAAACCTGATGCCTAT...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAAGTGAGCATAAATACTaGATTCCCTTTAGACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPSEHKY*IPFRLV Trigger: CACTAGTCTAAAGGGAATCCAGTATTTATGCTCACT...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109355.9 |
||
| CDS-3UTR CAA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGAGGCTGGAAAGCTGTaGCTCCACGTTGGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRDSGPERPPWARELVGREAGKL*LHVGQQ Trigger: CTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGAGGCTGGAAAGCTGTaGCTCCACGTTGGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TTGTAALSVLRGRGSWWGEAGKL*LHVGQQ Trigger: CTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGAGCCATTCCAGTGCTaGTCCACCAGCTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TTGTAALSVLRGRGSWWGEPFQC*STSSRS Trigger: GCTCCTGGAGCTGGTGGACAAGCACTGGAATGGCTC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGGACCGAGAAACTTCTaGTCCAGGAGGAGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGTAALSVLRGRGSWWGGGPRNF*SRRREP Trigger: TGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCC...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGACCGAGAAACTTCTaGTCCAGGAGGAGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRDSGPERPPWARELVGRGPRNF*SRRREP Trigger: TGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGCCGTGTCGTGTACCATaGGTGAGGAGGAAGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGTAALSVLRGRGSWWGGPCRVP*VRRKTA Trigger: CGCTGTCTTCCTCCTCACCAATGGTACACGACACGG...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGTTGTCTCCCTTCTTGTaGCTTCCTGCATCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRDSGPERPPWARELVGRLSPFL*LPASVS Trigger: GGACACAGATGCAGGAAGCAACAAGAAGGGAGACAA...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGCCTGGTGAAGGTCACTaGTCTCCCTTCTTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRDSGPERPPWARELVGRPGEGH*SPFLLL Trigger: AAGCAACAAGAAGGGAGACAAGTGACCTTCACCAGG...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGAGCCATTCCAGTGCTaGTCCACCAGCTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARELVGRAAVLAPQTRLWEPFQC*STSSRS Trigger: GCTCCTGGAGCTGGTGGACAAGCACTGGAATGGCTC...CCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCTCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGTCAGCTGTTGGTTTTaGCGCAGAAGCTCATCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGTAALSVLRGRGSWWGGVSCWF*RRSSSC Trigger: ACACGATGAGCTTCTGCGCAAAAACCAACAGCTGAC...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGATGTGGTGGCCTTTTaGTCCTGTGAAGGCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: HRDSGPERPPWARELVGRDVVAF*SCEGFM Trigger: CATAAAGCCTTCACAGGACAAAAAGGCCACCACATC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCCTGTATGGTCAGCTGTaGGTTTTTGCGCAGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TTGTAALSVLRGRGSWWGLYGQL*VFAQKL Trigger: GAGCTTCTGCGCAAAAACCAACAGCTGACCATACAG...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGATGTGGTGGCCTTTTaGTCCTGTGAAGGCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: TTGTAALSVLRGRGSWWGDVVAF*SCEGFM Trigger: CATAAAGCCTTCACAGGACAAAAAGGCCACCACATC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGCTCAAATCTAGTTCTTaGAGGAAGGGTAAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRDSGPERPPWARELVGRLKSSS*RKGKGC Trigger: ACAGCCCTTACCCTTCCTCAAAGAACTAGATTTGAG...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGATAGGCATCAGGTTTaGGTATCAAGTCCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRDSGPERPPWARELVGRDRHQV*VSSPFL Trigger: CAGAAAAGGACTTGATACCAAAACCTGATGCCTATC...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGGGATAGGCATCAGGTTTaGGTATCAAGTCCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGTAALSVLRGRGSWWGGDRHQV*VSSPFL Trigger: CAGAAAAGGACTTGATACCAAAACCTGATGCCTATC...CCCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACCACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAATAAAAAGTCCTTaGTTTGCGTCTGTTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TTGTAALSVLRGRGSWWGGIKSP*FASVSI Trigger: GATGGAAACAGACGCAAACAAAGGACTTTTTATTCC...GCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGACAGCGGCCCTGAGCGTCCTCCGTGGGCGAGGGAGCTGGTGGGGCGGAAGAGTTTGAGAATATaGATTACCATAGTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRDSGPERPPWARELVGRKSLRI*ITIVVQ Trigger: CTGGACCACTATGGTAATCAATATTCTCAAACTCTT...CCGCCCCACCAGCTCCCTCGCCCACGGAGGACGCTCAGGGCCGCTGTCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGATGTGGTGGCCTTTTaGTCCTGTGAAGGCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: RELVGRAAVLAPQTRLWVDVVAF*SCEGFM Trigger: CATAAAGCCTTCACAGGACAAAAAGGCCACCACATC...GACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS CCA 90 bp | CCCAGGTCACTAGAGAGAGGTTGCGCCTCGCTGCCTGTAGCATCTTaGAAACCACGCTTCAGACTCGGGTTGGCAAGGATACCGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRSLERGCASLPVAS*KPRFRLGLARIPSF Trigger: GAAGGACGGTATCCTTGCCAACCCGAGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGCGAGGCGCAACCTCTCTCTAGTGACCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS TCA 90 bp | GGCATCACCAATAGAGTGGATTTTTCCGGCATAAGATCCCTGCAATaGGAGAGACTCCACCAGTTCCGGCTGCTCCAGGGTCAGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GITNRVDFSGIRSLQ*ERLHQFRLLQGQRP Trigger: GGGGCGCTGACCCTGGAGCAGCCGGAACTGGTGGAGTCTCTCTCATTGCAGGGATCTTATGCCGGAAAAATCCACTCTATTGGTGATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS GCA 90 bp | GGTACTGACCCGTGTCGTGTACCATTGGTGAGGAGGAAGACAGCGTaGTTTTCCCAAAGGGCGACGATCTCCCCAAAGGATGACTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTDPCRVPLVRRKTA*FSQRATISPKDDSL Trigger: CAGAGAGTCATCCTTTGGGGAGATCGTCGCCCTTTGGGAAAAGCACGCTGTCTTCCTCCTCACCAATGGTACACGACACGGGTCAGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGGTCGGAATAAAAAGTCCTTaGTTTGCGTCTGTTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RELVGRAAVLAPQTRLWVGIKSP*FASVSI Trigger: GATGGAAACAGACGCAAACAAAGGACTTTTTATTCC...GACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | GCGAGGGAGCTGGTGGGGCGGGCTGCGGTGCTAGCTCCACAAACTAGGCTCTGGAAGAGTTTGAGAATATaGATTACCATAGTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARELVGRAAVLAPQTRLWKSLRI*ITIVVQ Trigger: CTGGACCACTATGGTAATCAATATTCTCAAACTCTT...CCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCCCGCCCCACCAGCTCCCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGAGGCTGGAAAGCTGTaGCTCCACGTTGGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPEAGKL*LHVGQQ Trigger: CTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGAGCCATTCCAGTGCTaGTCCACCAGCTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPEPFQC*STSSRS Trigger: GCTCCTGGAGCTGGTGGACAAGCACTGGAATGGCTC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS TCA 90 bp | GTTGCTTCCTGCATCTGTGTCCCCAGCGGAAAAACGTCTAATTTCTaGGCTGGTGTGCCACTGCCCTGGGCTGCACAAATGCTGGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VASCICVPSGKTSNF*AGVPLPWAAQMLVR Trigger: CCTAACCAGCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTTTCCGCTGGGGACACAGATGCAGGAAGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS GCA 90 bp | AAAGAACCAGGTGCTGGTGTAAAGTCACGGAGGCTGGAAAGCTGTTaGTCCACGTTGGCCAGCAGAGCGGGGTCACTGTTGAAATGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KEPGAGVKSRRLESC*STLASRAGSLLKWV Trigger: AACCCATTTCAACAGTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTCCGTGACTTTACACCAGCACCTGGTTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGAGATTTCCCGGAATAACCTTTCTGCTCTTTATGCAGCTGCTGCAGCAGGAGGCTGGAAAGCTGTaGCTCCACGTTGGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QERFPGITFLLFMQLLQQEAGKL*LHVGQQ Trigger: CTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTC...CTGCTGCAGCAGCTGCATAAAGAGCAGAAAGGTTATTCCGGGAAATCTCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| CDS-3UTR CAA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGAGGCTGGAAAGCTGTaGCTCCACGTTGGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIFGGKHQYPPQGQREAGKL*LHVGQQ Trigger: CTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS TCA 90 bp | GAAGACAGCGTGCTTTTCCCAAAGGGCGACGATCTCCCCAAAGGATaGCTCTCTGACTCTCATGGAGAAGAGCAACTGTCTCCTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EDSVLFPKGDDLPKG*LSDSHGEEQLSPPV Trigger: GACTGGAGGAGACAGTTGCTCTTCTCCATGAGAGTCAGAGAGTCATCCTTTGGGGAGATCGTCGCCCTTTGGGAAAAGCACGCTGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGATGGGTGCCCACTCACAATCGAGGTGGCAGCGGTTCCCTCCAACTGCGATAGGCATCAGGTTTaGGTATCAAGTCCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCDGCPLTIEVAAVPSNCDRHQV*VSSPFL Trigger: CAGAAAAGGACTTGATACCAAAACCTGATGCCTATC...GCAGTTGGAGGGAACCGCTGCCACCTCGATTGTGAGTGGGCACCCATCACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| CDS-3UTR CAA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGGACCGAGAAACTTCTaGTCCAGGAGGAGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRGPRNF*SRRREP Trigger: TGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCGTGTCGTGTACCATaGGTGAGGAGGAAGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRPCRVP*VRRKTA Trigger: CGCTGTCTTCCTCCTCACCAATGGTACACGACACGG...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS TCA 90 bp | GTTTGCGTCTGTTTCCATCCTGGCATCAACCTCAGGACTGACGTGTaGCGCGGGGCCCTCATCTGTCACACAGTTTTTCATTGTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCFHPGINLRTDV*RGALICHTVFHCLL Trigger: GAGAAGACAATGAAAAACTGTGTGACAGATGAGGGCCCCGCGTCACACGTCAGTCCTGAGGTTGATGCCAGGATGGAAACAGACGCAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS TCA 90 bp | GTCCTTTGTTTGCGTCTGTTTCCATCCTGGCATCAACCTCAGGACTaGCGTGTGACGCGGGGCCCTCATCTGTCACACAGTTTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VLCLRLFPSWHQPQD*RVTRGPHLSHSFSL Trigger: CAATGAAAAACTGTGTGACAGATGAGGGCCCCGCGTCACACGTCAGTCCTGAGGTTGATGCCAGGATGGAAACAGACGCAAACAAAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS GCA 90 bp | GTGTCCCCAGCGGAAAAACGTCTAATTTCTGAGCTGGTGTGCCACTaGCCTGGGCTGCACAAATGCTGGTTAGGGAATCCTTTATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSPAEKRLISELVCH*PGLHKCWLGNPLFP Trigger: GGGAAATAAAGGATTCCCTAACCAGCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTTTCCGCTGGGGACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS GCA 90 bp | GCATCTGTGTCCCCAGCGGAAAAACGTCTAATTTCTGAGCTGGTGTaGCACTGCCCTGGGCTGCACAAATGCTGGTTAGGGAATCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASVSPAEKRLISELV*HCPGLHKCWLGNPL Trigger: TAAAGGATTCCCTAACCAGCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTTTCCGCTGGGGACACAGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGCTGCCTGTAGCATCTaGGAAACCACGCTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPAACSI*ETTLQT Trigger: AGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCCCTGGTGAAGGTCACTaGTCTCCCTTCTTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPPGEGH*SPFLLL Trigger: AAGCAACAAGAAGGGAGACAAGTGACCTTCACCAGG...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGATGGGTGCCCACTCACAATCGAGGTGGCAGCGGTTCCCTCCAACTGCAAGAGTTTGAGAATATaGATTACCATAGTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VCDGCPLTIEVAAVPSNCKSLRI*ITIVVQ Trigger: CTGGACCACTATGGTAATCAATATTCTCAAACTCTT...GCAGTTGGAGGGAACCGCTGCCACCTCGATTGTGAGTGGGCACCCATCACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGAGAGATTTCCCGGAATAACCTTTCTGCTCTTTATGCAGCTGCTGCAGCAGCTGCCTGTAGCATCTaGGAAACCACGCTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: AGEISRNNLSALYAAAAAAACSI*ETTLQT Trigger: AGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGC...TGCTGCAGCAGCTGCATAAAGAGCAGAAAGGTTATTCCGGGAAATCTCTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
||
| CDS-3UTR CAA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGGCTGCCTGTAGCATCTaGGAAACCACGCTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRAACSI*ETTLQT Trigger: AGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGC...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCGTCAGCTGTTGGTTTTaGCGCAGAAGCTCATCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPVSCWF*RRSSSC Trigger: ACACGATGAGCTTCTGCGCAAAAACCAACAGCTGAC...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS CCA 90 bp | CGGGGTTTGACAGGGATGTTAGTAAGTCTCCACAGGGATGGGATGTaGTGGCCTTTTTGTCCTGTGAAGGCTTTATGCTATGTTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGLTGMLVSLHRDGM*WPFCPVKALCYVLG Trigger: ACCGAGAACATAGCATAAAGCCTTCACAGGACAAAAAGGCCACCACATCCCATCCCTGTGGAGACTTACTAACATCCCTGTCAAACCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS CCA 90 bp | CTGGAGTCGGGGTTTGACAGGGATGTTAGTAAGTCTCCACAGGGATaGGATGTGGTGGCCTTTTTGTCCTGTGAAGGCTTTATGCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: LESGFDRDVSKSPQG*DVVAFLSCEGFMLC Trigger: ACATAGCATAAAGCCTTCACAGGACAAAAAGGCCACCACATCCCATCCCTGTGGAGACTTACTAACATCCCTGTCAAACCCCGACTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCTGGTGAAGGTCACTaGTCTCCCTTCTTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRPGEGH*SPFLLL Trigger: AAGCAACAAGAAGGGAGACAAGTGACCTTCACCAGG...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGGGACCGAGAAACTTCTaGTCCAGGAGGAGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQGPRNF*SRRREP Trigger: TGGCTCCCTCCTCCTGGACAAGAAGTTTCTCGGTCC...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCCGTGTCGTGTACCATaGGTGAGGAGGAAGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQPCRVP*VRRKTA Trigger: CGCTGTCTTCCTCCTCACCAATGGTACACGACACGG...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | ACCAGTTTTTGCTTCAGACTTTCCACATCGTTAGGAACTAGCAGCCCTGCTTCCCCTGGTGAAGGTCACTaGTCTCCCTTCTTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSFCFRLSTSLGTSSPASPGEGH*SPFLLL Trigger: AAGCAACAAGAAGGGAGACAAGTGACCTTCACCAGG...GGAAGCAGGGCTGCTAGTTCCTAACGATGTGGAAAGTCTGAAGCAAAAACTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216457.2 |
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| CDS CCA 90 bp | ATCACCCACATCCAGGCGTTTACCCAAGGAGGCATCATGGGTACATaGATAGGCATCAGGTTTTGGTATCAAGTCCTTTTCTGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ITHIQAFTQGGIMGT*IGIRFWYQVLFWRR Trigger: TCTTCTCCAGAAAAGGACTTGATACCAAAACCTGATGCCTATCCATGTACCCATGATGCCTCCTTGGGTAAACGCCTGGATGTGGGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS CCA 90 bp | GGTTTGACAGGGATGTTAGTAAGTCTCCACAGGGATGGGATGTGGTaGCCTTTTTGTCCTGTGAAGGCTTTATGCTATGTTCTCGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLTGMLVSLHRDGMW*PFCPVKALCYVLGS Trigger: ACTACCGAGAACATAGCATAAAGCCTTCACAGGACAAAAAGGCCACCACATCCCATCCCTGTGGAGACTTACTAACATCCCTGTCAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGGCTGCCTGTAGCATCTaGGAAACCACGCTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQAACSI*ETTLQT Trigger: AGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGC...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGCCGTGTCGTGTACCATaGGTGAGGAGGAAGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQPCRVP*VRRKTA Trigger: CGCTGTCTTCCTCCTCACCAATGGTACACGACACGG...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
||
| CDS-3UTR CAA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCTCAAATCTAGTTCTTaGAGGAAGGGTAAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRLKSSS*RKGKGC Trigger: ACAGCCCTTACCCTTCCTCAAAGAACTAGATTTGAG...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCTGTATGGTCAGCTGTaGGTTTTTGCGCAGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQLYGQL*VFAQKL Trigger: GAGCTTCTGCGCAAAAACCAACAGCTGACCATACAG...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAGTCAGCTGTTGGTTTTaGCGCAGAAGCTCATCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGVSCWF*RRSSSC Trigger: ACACGATGAGCTTCTGCGCAAAAACCAACAGCTGAC...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGCCCTTCCTTACAACAGGATaGAGTCTCAAATCTAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFLIFGGKHQYPPQGQRPFLTTG*SLKSSS Trigger: AGAACTAGATTTGAGACTCAATCCTGTTGTAAGGAA...GGGCCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS-3UTR CAA 90 bp | ACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGCGGAAGAGTTTGAGAATATaGATTACCATAGTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIFGGKHQYPPQGQRKSLRI*ITIVVQ Trigger: CTGGACCACTATGGTAATCAATATTCTCAAACTCTT...CCGCTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGAGATGTGGTGGCCTTTTaGTCCTGTGAAGGCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGDVVAF*SCEGFM Trigger: CATAAAGCCTTCACAGGACAAAAAGGCCACCACATC...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS TCA 90 bp | GCTTTATGCTATGTTCTCGGTAGTTCTTGCCCTTCTGAGCCCTTTTaGCAAGACTTCCGTGCAGGCAAAGAGTTTGAGAATATTGATTAC | + |
|
Preference number: 5 (lower is better) Translates to: ALCYVLGSSCPSEPF*QDFRAGKEFENIDY Trigger: GTAATCAATATTCTCAAACTCTTTGCCTGCACGGAAGTCTTGTCAAAAGGGCTCAGAAGGGCAAGAACTACCGAGAACATAGCATAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCATTGTCTCCCTTCTTGTaGCTTCCTGCATCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPLSPFL*LPASVS Trigger: GGACACAGATGCAGGAAGCAACAAGAAGGGAGACAA...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
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| CDS-3UTR CAA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGGATAGGCATCAGGTTTaGGTATCAAGTCCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQDRHQV*VSSPFL Trigger: CAGAAAAGGACTTGATACCAAAACCTGATGCCTATC...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACTGTATGGTCAGCTGTaGGTTTTTGCGCAGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPLYGQL*VFAQKL Trigger: GAGCTTCTGCGCAAAAACCAACAGCTGACCATACAG...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 |
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| CDS-3UTR CAA 90 bp | CATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACTCAAATCTAGTTCTTaGAGGAAGGGTAAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HNTFFLIFGGKHQYPPQGLKSSS*RKGKGC Trigger: ACAGCCCTTACCCTTCCTCAAAGAACTAGATTTGAG...TCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGGGAATAAAAAGTCCTTaGTTTGCGTCTGTTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQGIKSP*FASVSI Trigger: GATGGAAACAGACGCAAACAAAGGACTTTTTATTCC...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGGGACAGTTCCTTACAACAGGATaGAGTCTCAAATCTAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NTFFLIFGGKHQYPPQGQFLTTG*SLKSSS Trigger: AGAACTAGATTTGAGACTCAATCCTGTTGTAAGGAA...CTGTCCCTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS-3UTR CAA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCAGATAGGCATCAGGTTTaGGTATCAAGTCCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPDRHQV*VSSPFL Trigger: CAGAAAAGGACTTGATACCAAAACCTGATGCCTATC...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
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| CDS-3UTR CAA 90 bp | CATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCACAGAAGAGTTTGAGAATATaGATTACCATAGTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HHNTFFLIFGGKHQYPPQKSLRI*ITIVVQ Trigger: CTGGACCACTATGGTAATCAATATTCTCAAACTCTT...CTGTGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000216457.2 |
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| CDS-3UTR CAA 90 bp | AGTCATCATAATACGTTTTTCTTAATCTTTGGGGGTAAACACCAGTACCCACCATTCCTTACAACAGGATaGAGTCTCAAATCTAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHHNTFFLIFGGKHQYPPFLTTG*SLKSSS Trigger: AGAACTAGATTTGAGACTCAATCCTGTTGTAAGGAA...TGGTGGGTACTGGTGTTTACCCCCAAAGATTAAGAAAAACGTATTATGATGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109355.9 |
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| CDS GCA 72 bp | GGTGCTGGTGTAAAGTCACGGAGGCTGGAAAGCTGTTaGTCCACGTTGGCCAGCAGAGCGGGGTCACTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GAGVKSRRLESC*STLASRAGSLL Trigger: CAACAGTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTCCGTGACTTTACACCAGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS CAA 90 bp | GCCCAGGTCACTAGAGAGAGGTTGCGCCTCGCTGCCTGTAGCATCTaGGAAACCACGCTTCAGACTCGGGTTGGCAAGGATACCGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AQVTRERLRLAACSI*ETTLQTRVGKDTVL Trigger: AAGGACGGTATCCTTGCCAACCCGAGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGCGAGGCGCAACCTCTCTCTAGTGACCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CAA 90 bp | GCCTCGCTGCCTGTAGCATCTTGGAAACCACGCTTCAGACTCGGGTaGGCAAGGATACCGTCCTTCCGCTTGAATCCTCTCCTTGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASLPVASWKPRFRLG*ARIPSFRLNPLLEG Trigger: CCCTTCAAGGAGAGGATTCAAGCGGAAGGACGGTATCCTTGCCAACCCGAGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGCGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS TCA 72 bp | GAGATCGGACTGTGCTCTGAGGAGGCGGGTAGAGCCTaGGTTCATCTTCCTGGTGAAGGTCACTTGTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EIGLCSEEAGRA*VHLPGEGHLSP Trigger: GGGAGACAAGTGACCTTCACCAGGAAGATGAACTCAGGCTCTACCCGCCTCCTCAGAGCACAGTCCGATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067305.8 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CAA 90 bp | GAAAGAACCAGGTGCTGGTGTAAAGTCACGGAGGCTGGAAAGCTGTaGCTCCACGTTGGCCAGCAGAGCGGGGTCACTGTTGAAATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ERTRCWCKVTEAGKL*LHVGQQSGVTVEMG Trigger: ACCCATTTCAACAGTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTCCGTGACTTTACACCAGCACCTGGTTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS GCA 72 bp | TCCCCAGCGGAAAAACGTCTAATTTCTGAGCTGGTGTaGCACTGCCCTGGGCTGCACAAATGCTGGTTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPAEKRLISELV*HCPGLHKCWLG Trigger: CCCTAACCAGCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTTTCCGCTGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CCA 72 bp | CTAGAGAGAGGTTGCGCCTCGCTGCCTGTAGCATCTTaGAAACCACGCTTCAGACTCGGGTTGGCAAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: LERGCASLPVAS*KPRFRLGLARI Trigger: TATCCTTGCCAACCCGAGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGCGAGGCGCAACCTCTCTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CAA 72 bp | GTAAAGTCACGGAGGCTGGAAAGCTGTTGCTCCACGTaGGCCAGCAGAGCGGGGTCACTGTTGAAATGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VKSRRLESCCST*ASRAGSLLKWV Trigger: AACCCATTTCAACAGTGACCCCGCTCTGCTGGCCAACGTGGAGCAACAGCTTTCCAGCCTCCGTGACTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS CAA 72 bp | ACTAGAGAGAGGTTGCGCCTCGCTGCCTGTAGCATCTaGGAAACCACGCTTCAGACTCGGGTTGGCAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TRERLRLAACSI*ETTLQTRVGKD Trigger: ATCCTTGCCAACCCGAGTCTGAAGCGTGGTTTCCAAGATGCTACAGGCAGCGAGGCGCAACCTCTCTCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS TCA 72 bp | TGCATCTGTGTCCCCAGCGGAAAAACGTCTAATTTCTaGGCTGGTGTGCCACTGCCCTGGGCTGCACAAATG | + |
|
Preference number: 6 (lower is better) Translates to: CICVPSGKTSNF*AGVPLPWAAQM Trigger: CATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTTTCCGCTGGGGACACAGATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS TCA 72 bp | GAGATCGGACTGTGCTCTGAGGAGGCGGGTAGAGCCTaGGTTCTAATCCATCTTCCTGGTGAAGGTCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: EIGLCSEEAGRA*VLIHLPGEGHL Trigger: CAAGTGACCTTCACCAGGAAGATGGATTAGAACTCAGGCTCTACCCGCCTCCTCAGAGCACAGTCCGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109355.9 ENSMUST00000216457.2 |
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| CDS TCA 72 bp | CCCAAAGGGCGACGATCTCCCCAAAGGATGACTCTCTaGCTCTCATGGAGAAGAGCAACTGTCTCCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PKGRRSPQRMTL*LSWRRATVSSS Trigger: ACTGGAGGAGACAGTTGCTCTTCTCCATGAGAGTCAGAGAGTCATCCTTTGGGGAGATCGTCGCCCTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216765.2 |
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| CDS CCA 72 bp | GAAAGACACTCGGTATCCATCTCTCGTCATCTTCTCTaGAGATCGGACTGTGCTCTGAGGAGGCGGGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ERHSVSISRHLL*RSDCALRRRVE Trigger: CTCTACCCGCCTCCTCAGAGCACAGTCCGATCTCCAGAGAAGATGACGAGAGATGGATACCGAGTGTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
||
| CDS CAA 72 bp | CCTGTAGCATCTTGGAAACCACGCTTCAGACTCGGGTaGGCAAGGATACCGTCCTTCCGCTTGAATCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVASWKPRFRLG*ARIPSFRLNPL Trigger: GAGAGGATTCAAGCGGAAGGACGGTATCCTTGCCAACCCGAGTCTGAAGCGTGGTTTCCAAGATGCTACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS TCA 72 bp | TGTTTCCATCCTGGCATCAACCTCAGGACTGACGTGTaGCGCGGGGCCCTCATCTGTCACACAGTTTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CFHPGINLRTDV*RGALICHTVFH Trigger: ATGAAAAACTGTGTGACAGATGAGGGCCCCGCGTCACACGTCAGTCCTGAGGTTGATGCCAGGATGGAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
||
| CDS GCA 72 bp | GCGGAAAAACGTCTAATTTCTGAGCTGGTGTGCCACTaGCCTGGGCTGCACAAATGCTGGTTAGGGAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: AEKRLISELVCH*PGLHKCWLGNP Trigger: AGGATTCCCTAACCAGCATTTGTGCAGCCCAGGGCAGTGGCACACCAGCTCAGAAATTAGACGTTTTTCCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CAA 72 bp | GTCACGGACGGCTCGGTCATCCAGTTTTTCCAGCGTTaGCAGCGTGTACACGGCAAAGAGCCTATAATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VTDGSVIQFFQR*QRVHGKEPIIC Trigger: ACAGATTATAGGCTCTTTGCCGTGTACACGCTGCAAACGCTGGAAAAACTGGATGACCGAGCCGTCCGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CAA 90 bp | CCTCTCGCTGTCACGGACGGCTCGGTCATCCAGTTTTTCCAGCGTTaGCAGCGTGTACACGGCAAAGAGCCTATAATCTGTATCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PLAVTDGSVIQFFQR*QRVHGKEPIICIFP Trigger: AGGAAAGATACAGATTATAGGCTCTTTGCCGTGTACACGCTGCAAACGCTGGAAAAACTGGATGACCGAGCCGTCCGTGACAGCGAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CAA 90 bp | AAACCACGCTTCAGACTCGGGTTGGCAAGGATACCGTCCTTCCGCTaGAATCCTCTCCTTGAAGGGCTTAATGACCTCTTAGTCGGAATC | + |
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Preference number: 6 (lower is better) Translates to: KPRFRLGLARIPSFR*NPLLEGLNDLLVGI Trigger: GATTCCGACTAAGAGGTCATTAAGCCCTTCAAGGAGAGGATTCAAGCGGAAGGACGGTATCCTTGCCAACCCGAGTCTGAAGCGTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS GCA 72 bp | GGGATGTGGTGGCCTTTTTGTCCTGTGAAGGCTTTATaGTATGTTCTCGGTAGTTCTTGCCCTTCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GMWWPFCPVKAL*YVLGSSCPSEP Trigger: GGGCTCAGAAGGGCAAGAACTACCGAGAACATAGCATAAAGCCTTCACAGGACAAAAAGGCCACCACATCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS TCA 72 bp | TCCACAGGGATGGGATGTGGTGGCCTTTTTGTCCTGTaGAGGCTTTATGCTATGTTCTCGGTAGTTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: STGMGCGGLFVL*RLYAMFSVVLA Trigger: GGCAAGAACTACCGAGAACATAGCATAAAGCCTTCACAGGACAAAAAGGCCACCACATCCCATCCCTGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS CCA 72 bp | GGGTTTGACAGGGATGTTAGTAAGTCTCCACAGGGATaGGATGTGGTGGCCTTTTTGTCCTGTGAAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: GFDRDVSKSPQG*DVVAFLSCEGF Trigger: AAAGCCTTCACAGGACAAAAAGGCCACCACATCCCATCCCTGTGGAGACTTACTAACATCCCTGTCAAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS CAA 72 bp | TTCAGACTCGGGTTGGCAAGGATACCGTCCTTCCGCTaGAATCCTCTCCTTGAAGGGCTTAATGACCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: FRLGLARIPSFR*NPLLEGLNDLL Trigger: TAAGAGGTCATTAAGCCCTTCAAGGAGAGGATTCAAGCGGAAGGACGGTATCCTTGCCAACCCGAGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS TCA 72 bp | CCTCTAAGAGAAAATTTTCACTGTTGCCCAACTGACTaGAATGTAGCTTGGCCGCTCTCCTCTCGCTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PLRENFHCCPTD*NVAWPLSSRCH Trigger: GTGACAGCGAGAGGAGAGCGGCCAAGCTACATTTCAGTCAGTTGGGCAACAGTGAAAATTTTCTCTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS TCA 72 bp | TCCACCTCTAAGAGAAAATTTTCACTGTTGCCCAACTaGCTGAAATGTAGCTTGGCCGCTCTCCTCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: STSKRKFSLLPN*LKCSLAALLSL Trigger: CAGCGAGAGGAGAGCGGCCAAGCTACATTTCAGTCAGTTGGGCAACAGTGAAAATTTTCTCTTAGAGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CCA 72 bp | ATCCAGGCGTTTACCCAAGGAGGCATCATGGGTACATaGATAGGCATCAGGTTTTGGTATCAAGTCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: IQAFTQGGIMGT*IGIRFWYQVLF Trigger: GAAAAGGACTTGATACCAAAACCTGATGCCTATCCATGTACCCATGATGCCTCCTTGGGTAAACGCCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS CCA 72 bp | GGGATGTTAGTAAGTCTCCACAGGGATGGGATGTGGTaGCCTTTTTGTCCTGTGAAGGCTTTATGCTATGTT | + |
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Preference number: 6 (lower is better) Translates to: GMLVSLHRDGMW*PFCPVKALCYV Trigger: AACATAGCATAAAGCCTTCACAGGACAAAAAGGCCACCACATCCCATCCCTGTGGAGACTTACTAACATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000067305.8 ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216457.2 ENSMUST00000216765.2 |
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| CDS CAA 72 bp | TTCCTTACAACAGGATTGAGTCTCAAATCTAGTTCTTaGAGGAAGGGTAAGGGCTGTAGTCGGGACACCTCC | + |
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Preference number: 6 (lower is better) Translates to: FLTTGLSLKSSS*RKGKGCSRDTS Trigger: GGAGGTGTCCCGACTACAGCCCTTACCCTTCCTCAAAGAACTAGATTTGAGACTCAATCCTGTTGTAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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| CDS CAA 90 bp | TCTGTATCTTTCCTTACAACAGGATTGAGTCTCAAATCTAGTTCTTaGAGGAAGGGTAAGGGCTGTAGTCGGGACACCTCCACTAATGAA | + |
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Preference number: 6 (lower is better) Translates to: SVSFLTTGLSLKSSS*RKGKGCSRDTSTNE Trigger: TTCATTAGTGGAGGTGTCCCGACTACAGCCCTTACCCTTCCTCAAAGAACTAGATTTGAGACTCAATCCTGTTGTAAGGAAAGATACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109355.9 ENSMUST00000213547.2 ENSMUST00000216765.2 |
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