Pregenerated sensors for LRRC31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074653Ensembl transcript IDs: ENSMUST00000108263.2, ENSMUST00000126658.8
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACAAGAACCAGAAGAGGGCGTCAGATCACATTACGGATGGTTGTaGGTCACCATGTGGTTGCTGGGATTTGAACTTGTGACCTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: RQEPEEGVRSHYGWL*VTMWLLGFELVTFR Trigger: TCTGAAGGTCACAAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCATCCGTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 90 bp | CCCTCTGAATCAATTAAACTGGAATGGTGCTGTGGACCCCAGTACTaGATGCACAAAGTGCTGGCTTACCTGAGTGATTCATTTGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: PSESIKLEWCCGPQY*MHKVLAYLSDSFGE Trigger: TTCCCCAAATGAATCACTCAGGTAAGCCAGCACTTTGTGCATTCAGTACTGGGGTCCACAGCACCATTCCAGTTTAATTGATTCAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 90 bp | GGCTTGCAGGTTCAGGTGAGCTTCACTAAGAACATATTTCACATATaGGTCACAACTCATTGCTGGGGTAGTTCAATGTACCTGTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GLQVQVSFTKNIFHI*VTTHCWGSSMYLCH Trigger: GTGGCACAGGTACATTGAACTACCCCAGCAATGAGTTGTGACTCATATGTGAAATATGTTCTTAGTGAAGCTCACCTGAACCTGCAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 90 bp | GAGGGGATATTTGTACGTCTGAAACCCTGGGCTTGCAGGTTCAGGTaGGCTTCACTAAGAACATATTTCACATATGAGTCACAACTCATT | + |
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Preference number: 1 (lower is better) Translates to: EGIFVRLKPWACRFR*ASLRTYFTYESQLI Trigger: AATGAGTTGTGACTCATATGTGAAATATGTTCTTAGTGAAGCTCACCTGAACCTGCAAGCCCAGGGTTTCAGACGTACAAATATCCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 90 bp | CCTGTTTTAAATGAAATTTACAGACTCTGCAATAATATTAACAACTaGCAACTAACTACAGAGCAAAGGCTTGGCTCTGTAGCTTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: PVLNEIYRLCNNINN*QLTTEQRLGSVASG Trigger: GCCTGAAGCTACAGAGCCAAGCCTTTGCTCTGTAGTTAGTTGTCAGTTGTTAATATTATTGCAGAGTCTGTAAATTTCATTTAAAACAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCAAAGGCTTGGCTCTGTAGCTTCAGGCTCAGGTGACACAGACCTCGGAGTGGGATATTTGTACGTCTaGAACCCTGGGCTTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: EQRLGSVASGSGDTDLGVGYLYV*NPGLAG Trigger: ACCTGCAAGCCCAGGGTTTCAGACGTACAAATATCC...CACTCCGAGGTCTGTGTCACCTGAGCCTGAAGCTACAGAGCCAAGCCTTTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGAGTCCTCGGAACCCAGCCACCTCGGGATACCACTCCAGTGGGAATCAAACTGGAATGGTGCTGTaGACCCCAGTACTGAATGCA | + |
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Preference number: 2 (lower is better) Translates to: SKSPRNPATSGYHSSGNQTGMVL*TPVLNA Trigger: TGCATTCAGTACTGGGGTCCACAGCACCATTCCAGT...TTGATTCCCACTGGAGTGGTATCCCGAGGTGGCTGGGTTCCGAGGACTCTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR TCA 90 bp | TACACTGTTGCTGTCTTCAGACAAGAACCAGAAGAGGGCGTCAGATCACATTACACCTTAATCTTGGAATaGTTGGTGGGGAGTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: YTVAVFRQEPEEGVRSHYTLILE*LVGSGA Trigger: AGCCCCACTCCCCACCAATCATTCCAAGATTAAGGT...GTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCTGAAGACAGCAACAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTTGCTGTCTTCAGACAAGAACCAGAAGAGGGCGTCAGATCACATTACGTTAGCAGGACAAGACTaGGACTACTGCCCTAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: TLLLSSDKNQKRASDHITLAGQD*DYCPRK Trigger: CTTTCTAGGGCAGTAGTCTCAGTCTTGTCCTGCTAA...CGTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCTGAAGACAGCAACAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR TCA 90 bp | TACACTGTTGCTGTCTTCAGACAAGAACCAGAAGAGGGCGTCAGATCACATTACGTGGTTGCTGGGATTTaGACTTGTGACCTTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: YTVAVFRQEPEEGVRSHYVVAGI*TCDLQR Trigger: CCTCTGAAGGTCACAAGTTCAAATCCCAGCAACCAC...GTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCTGAAGACAGCAACAGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTTGCTGTCTTCAGACAAGAACCAGAAGAGGGCGTCAGATCACATTACGACAGTTACACAGACCTaGAAGTTGTGGGAACTACTA | + |
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Preference number: 2 (lower is better) Translates to: TLLLSSDKNQKRASDHITTVTQT*KLWELL Trigger: TAGTAGTTCCCACAACTTTCAGGTCTGTGTAACTGT...CGTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCTGAAGACAGCAACAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTCGGGATACCACTCCAGTGGGAATCAATTCTTCAATACATAAAATGTGGGCCTGGGATTAGGGAGTaGTTTCACAGATCCCTAACT | + |
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Preference number: 2 (lower is better) Translates to: HLGIPLQWESILQYIKCGPGIRE*FHRSLT Trigger: AGTTAGGGATCTGTGAAAGCACTCCCTAATCCCAGG...CCCACATTTTATGTATTGAAGAATTGATTCCCACTGGAGTGGTATCCCGAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGGCATGTACTAGCTTTCCTTCTGTGAGTCTGGAATTCTCAAATGTTCTAAATACAGCTATATGCTaGGCCTTGAGTCTCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: MMACTSFPSVSLEFSNVLNTAIC*ALSLPL Trigger: CAGAGGGAGACTCAAGGCTCAGCATATAGCTGTATT...TAGAACATTTGAGAATTCCAGACTCACAGAAGGAAAGCTAGTACATGCCATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR CCA 72 bp | ACTGCCCTAGAAAGGCCCATGGCTGACCGGAAAGGCTaGCCTGGCCCTAAGATGCTGCCCAGAGAACCTGGG | + |
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Preference number: 3 (lower is better) Translates to: TALERPMADRKG*PGPKMLPREPG Trigger: CCCAGGTTCTCTGGGCAGCATCTTAGGGCCAGGCCAGCCTTTCCGGTCAGCCATGGGCCTTTCTAGGGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 72 bp | CGTCACTGCCAAGCACCTTCCTCCACTTGCCAGCCATaGTGGGAAGAAATTCTAGATCTGGTAGACCATGAC | + |
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Preference number: 3 (lower is better) Translates to: RHCQAPSSTCQP*WEEILDLVDHD Trigger: GTCATGGTCTACCAGATCTAGAATTTCTTCCCATCATGGCTGGCAAGTGGAGGAAGGTGCTTGGCAGTGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 72 bp | CGGATGGTTGTGAGTCACCATGTGGTTGCTGGGATTTaGACTTGTGACCTTCAGAGGAGCAGTCAGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TCDLQRSSQCS Trigger: AGAACACTGACTGCTCCTCTGAAGGTCACAAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCATCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGCGTCAGATCACATTACGGATGGTTGTaGGTCACCATGTGGTTGCTGGGATTTGAACTTGTG | + |
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Preference number: 3 (lower is better) Translates to: PEEGVRSHYGWL*VTMWLLGFELV Trigger: CACAAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCATCCGTAATGTGATCTGACGCCCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR CAA 90 bp | CACCTCGGGATACCACTCCAGTGGGAATCAATTCTTCAATACATAAAATGTGGGAGCACCTTCCTCCACTaGCCAGCCATGATGGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: HLGIPLQWESILQYIKCGSTFLH*PAMMGR Trigger: TCTTCCCATCATGGCTGGCAAGTGGAGGAAGGTGCT...CCCACATTTTATGTATTGAAGAATTGATTCCCACTGGAGTGGTATCCCGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR CCA 72 bp | CAATGTACCTGTGCCACTCCACTGAGAGAGAACTTTTaGGAGTTGTTCTTGGTATCCTTGGGGCTTTCCATC | + |
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Preference number: 3 (lower is better) Translates to: QCTCATPLRENF*ELFLVSLGLSI Trigger: GATGGAAAGCCCCAAGGATACCAAGAACAACTCCCAAAAGTTCTCTCTCAGTGGAGTGGCACAGGTACATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR CCA 72 bp | GACACTGCTATACATCCAAGGCTGGCCCCAGTCTTCTaGTCCTCCTGGCAGGCACTTTACGTTAATTATAAA | + |
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Preference number: 3 (lower is better) Translates to: DTAIHPRLAPVF*SSWQALYVNYK Trigger: TTTATAATTAACGTAAAGTGCCTGCCAGGAGGACCAGAAGACTGGGGCCAGCCTTGGATGTATAGCAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 72 bp | TGTGAGTCACCATGTGGTTGCTGGGATTTGAACTTGTaGCCTTCAGAGGAGCAGTCAGTGTTCTTAACCACT | + |
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Preference number: 3 (lower is better) Translates to: CESPCGCWDLNL*PSEEQSVFLTT Trigger: AGTGGTTAAGAACACTGACTGCTCCTCTGAAGGTCACAAGTTCAAATCCCAGCAACCACATGGTGACTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR GCA 72 bp | GTCACAACTCATTGCTGGGGTAGTTCAATGTACCTGTaGCACTCCACTGAGAGAGAACTTTTGGGAGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VTTHCWGSSMYL*HSTERELLGVV Trigger: AACAACTCCCAAAAGTTCTCTCTCAGTGGAGTGGCACAGGTACATTGAACTACCCCAGCAATGAGTTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR-3UTR CAA 90 bp | ATGATGGCATGTACTAGCTTTCCTTCTGTGAGTCTGGAATTCTCAAATGTTCTATCTGAAACCCTGGGCTaGCAGGTTCAGGTGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: MMACTSFPSVSLEFSNVLSETLG*QVQVSF Trigger: GAAGCTCACCTGAACCTGCAAGCCCAGGGTTTCAGA...TAGAACATTTGAGAATTCCAGACTCACAGAAGGAAAGCTAGTACATGCCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 72 bp | CCAGTACTGAATGCACAAAGTGCTGGCTTACCTGAGTaGTTCATTTGGGGAAATTCTACGATATCCCGTCAC | + |
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Preference number: 3 (lower is better) Translates to: PVLNAQSAGLPE*FIWGNSTISRH Trigger: GTGACGGGATATCGTAGAATTTCCCCAAATGAATCACTCAGGTAAGCCAGCACTTTGTGCATTCAGTACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR TCA 72 bp | TCAATTAAACTGGAATGGTGCTGTGGACCCCAGTACTaGATGCACAAAGTGCTGGCTTACCTGAGTGATTCA | + |
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Preference number: 3 (lower is better) Translates to: SIKLEWCCGPQY*MHKVLAYLSDS Trigger: TGAATCACTCAGGTAAGCCAGCACTTTGTGCATTCAGTACTGGGGTCCACAGCACCATTCCAGTTTAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR GCA 72 bp | CAGCAACATAGGTTCTACCTGAGACACTACAGGAAGTaGACTGCCATTTGTGAACTGATAAAACCCTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: QQHRFYLRHYRK*TAICELIKPCF Trigger: AAAACAGGGTTTTATCAGTTCACAAATGGCAGTGCACTTCCTGTAGTGTCTCAGGTAGAACCTATGTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CCA 90 bp | GAGCAAAGGCTTGGCTCTGTAGCTTCAGGCTCAGGTGACACAGACCTCGGAGTGCTGTGCAGTGTCTGCTaGGAGCTGGGAAGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: EQRLGSVASGSGDTDLGVLCSVC*ELGSSL Trigger: AAGAGAGCTTCCCAGCTCCCAGCAGACACTGCACAG...CACTCCGAGGTCTGTGTCACCTGAGCCTGAAGCTACAGAGCCAAGCCTTTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR GCA 90 bp | GGACAAGTTCAAAGTCACTGTCAGTTAAATAGCAAGTTCAAGGCCAGCCTGGGCCCACTGTGCAGTGTCTaGTGGGAGCTGGGAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GQVQSHCQLNSKFKASLGPLCSV*WELGSS Trigger: AGAGCTTCCCAGCTCCCAGCAGACACTGCACAGTGG...GCCCAGGCTGGCCTTGAACTTGCTATTTAACTGACAGTGACTTTGAACTTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CCA 90 bp | AGCATTAAGTCCTGTGGGGAACGAGTGCTGGATGGTGGGCTAAGTGTACACCTGCGCCCACGTCTCTGTTaGATGACAAGTCCAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SIKSCGERVLDGGLSVHLRPRLC*MTSPVL Trigger: AAGAACTGGACTTGTCATCCAACAGAGACGTGGGCG...CAGGTGTACACTTAGCCCACCATCCAGCACTCGTTCCCCACAGGACTTAATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR TCA 90 bp | AATAACTCATTTTCCCACCAGACTCAGCAACCTCAGTTCACATTCCCTCTCAGCTTCCAGATGCTTCAGTaGTGCCAGCTGAGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NNSFSHQTQQPQFTFPLSFQMLQ*CQLSRH Trigger: GTGCCTGCTCAGCTGGCATCACTGAAGCATCTGGAA...GCTGAGAGGGAATGTGAACTGAGGTTGCTGAGTCTGGTGGGAAAATGAGTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR TCA 90 bp | AATAACTCATTTTCCCACCAGACTCAGCAACCTCAGTTCACATTCCCTCTCAGCGTCAGTGAGCACTGGTaGAGGTCCAGGACTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NNSFSHQTQQPQFTFPLSVSEHW*RSRTSR Trigger: TCTGGAAGTCCTGGACCTTCACCAGTGCTCACTGAC...GCTGAGAGGGAATGTGAACTGAGGTTGCTGAGTCTGGTGGGAAAATGAGTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR GCA 90 bp | ACACTGTTGCTGTCTTCAGACAAGAACCAGAAGAGGGCGTCAGATCACATTACGCCTCAGTGGTTAGTCTaGAGCTACTCAGCCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TLLLSSDKNQKRASDHITPQWLV*SYSASG Trigger: TCCTGAGGCTGAGTAGCTGCAGACTAACCACTGAGG...CGTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCTGAAGACAGCAACAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR TCA 90 bp | CACCTCGGGATACCACTCCAGTGGGAATCAATTCTTCAATACATAAAATGTGGGACAGGATGCATTTGCTaGGTGAGCATGTGGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HLGIPLQWESILQYIKCGTGCIC*VSMWRA Trigger: GGCCCTCCACATGCTCACTCAGCAAATGCATCCTGT...CCCACATTTTATGTATTGAAGAATTGATTCCCACTGGAGTGGTATCCCGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR TCA 90 bp | AATAACTCATTTTCCCACCAGACTCAGCAACCTCAGTTCACATTCCCTCTCAGCTTCAGTGATGCCAGCTaGGCAGGCACATCCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: NNSFSHQTQQPQFTFPLSFSDAS*AGTSSK Trigger: CTTTGAGGATGTGCCTGCTCAGCTGGCATCACTGAA...GCTGAGAGGGAATGTGAACTGAGGTTGCTGAGTCTGGTGGGAAAATGAGTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR TCA 90 bp | CACCTCGGGATACCACTCCAGTGGGAATCAATTCTTCAATACATAAAATGTGGGCACGTCTCTGTTGGATaGCAAGTCCAGTTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HLGIPLQWESILQYIKCGHVSVG*QVQFFQ Trigger: CTGGAAGAACTGGACTTGTCATCCAACAGAGACGTG...CCCACATTTTATGTATTGAAGAATTGATTCCCACTGGAGTGGTATCCCGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGGAAAATGCTACTCAAAGGTAGGTTAGGGTACAGCAGAGGCAGGAGGGTAAAAACCGGAGCCTaGAGAGTAGGTTCTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: IKRKMLLKGRLGYSRGRRVKTGA*RVGSLR Trigger: CCTCAGAGAACCTACTCTGCAGGCTCCGGTTTTTAC...CCTCCTGCCTCTGCTGTACCCTAACCTACCTTTGAGTAGCATTTTCCTTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| 3UTR CAA 72 bp | TCAATGTACCTGTGCCACTCCACTGAGAGAGAACTTTaGGGAGTTGTTCTTGGTATCCTTGGGGCTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SMYLCHSTEREL*GVVLGILGAFH Trigger: ATGGAAAGCCCCAAGGATACCAAGAACAACTCCCAAAAGTTCTCTCTCAGTGGAGTGGCACAGGTACATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR TCA 90 bp | ATGATGGCATGTACTAGCTTTCCTTCTGTGAGTCTGGAATTCTCAAATGTTCTAATCTCCTGCTGTCAGTaGGCACTGGTGAAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MMACTSFPSVSLEFSNVLISCCQ*ALVKVQ Trigger: CTGGACCTTCACCAGTGCTCACTGACAGCAGGAGAT...TAGAACATTTGAGAATTCCAGACTCACAGAAGGAAAGCTAGTACATGCCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CCA 90 bp | CACCTCGGGATACCACTCCAGTGGGAATCAATTCTTCAATACATAAAATGTGGGTTTGAACGTCCTCAGTaGTTAGTCTGCAGCTACTCA | + |
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Preference number: 4 (lower is better) Translates to: HLGIPLQWESILQYIKCGFERPQ*LVCSYS Trigger: TGAGTAGCTGCAGACTAACCACTGAGGACGTTCAAA...CCCACATTTTATGTATTGAAGAATTGATTCCCACTGGAGTGGTATCCCGAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CCA 90 bp | ATGATGGCATGTACTAGCTTTCCTTCTGTGAGTCTGGAATTCTCAAATGTTCTAACCGGGTTTCACCTTTaGAAGTTCTATGCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: MMACTSFPSVSLEFSNVLTGFHL*KFYAGH Trigger: ATGGCCTGCATAGAACTTCCAAAGGTGAAACCCGGT...TAGAACATTTGAGAATTCCAGACTCACAGAAGGAAAGCTAGTACATGCCATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CCA 90 bp | TACACTGTTGCTGTCTTCAGACAAGAACCAGAAGAGGGCGTCAGATCACATTACCACTGTCTTCCATATTaGATTTCAGGTCCATTTCTA | + |
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Preference number: 4 (lower is better) Translates to: YTVAVFRQEPEEGVRSHYHCLPY*ISGPFL Trigger: TAGAAATGGACCTGAAATCCAATATGGAAGACAGTG...GTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCTGAAGACAGCAACAGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CCA 90 bp | ATGATGGCATGTACTAGCTTTCCTTCTGTGAGTCTGGAATTCTCAAATGTTCTAAGTCTGATGCTCTTTTaGGATAATCCACAGGAACGC | + |
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Preference number: 4 (lower is better) Translates to: MMACTSFPSVSLEFSNVLSLMLF*DNPQER Trigger: GCGTTCCTGTGGATTATCCCAAAAGAGCATCAGACT...TAGAACATTTGAGAATTCCAGACTCACAGAAGGAAAGCTAGTACATGCCATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS CCA 90 bp | CCCACCAACACACTTATTCCAGGAAAGGTTGAGTATCTCCAGGGCTaGGAGGTACACAGAGGCGTCTGCAAGGGCTGCGAAAGCCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: PTNTLIPGKVEYLQG*EVHRGVCKGCESLA Trigger: AGCGAGGCTTTCGCAGCCCTTGCAGACGCCTCTGTGTACCTCCCAGCCCTGGAGATACTCAACCTTTCCTGGAATAAGTGTGTTGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS-3UTR CAA 90 bp | AGTAAGAGTCCTCGGAACCCAGCCACCTCGGGATACCACTCCAGTGGGAATCAACCTCCACCCAGTTCCTaGTTGCAGGAGAGGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: SKSPRNPATSGYHSSGNQPPPSS*LQERSS Trigger: ACTGGACCTCTCCTGCAACAAGGAACTGGGTGGAGG...TTGATTCCCACTGGAGTGGTATCCCGAGGTGGCTGGGTTCCGAGGACTCTTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS TCA 90 bp | GAAGCAGCTCCAGGTTCCCACCAACACACTTATTCCAGGAAAGGTTaGGTATCTCCAGGGCTGGGAGGTACACAGAGGCGTCTGCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: EAAPGSHQHTYSRKG*VSPGLGGTQRRLQG Trigger: CCCTTGCAGACGCCTCTGTGTACCTCCCAGCCCTGGAGATACTCAACCTTTCCTGGAATAAGTGTGTTGGTGGGAACCTGGAGCTGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS CCA 90 bp | AGGGCACAGTCCACAAGTTCAAGTGTTCGAATCTTGCTCCCTTGTTaGAATGTGTGGAGAACCCGAGGCAACTTCCCTCCCACCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RAQSTSSSVRILLPC*NVWRTRGNFPPTWL Trigger: CAGCCAGGTGGGAGGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGAACTTGTGGACTGTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS TCA 90 bp | GCAGCTTGGGTAGCAAGTGACCCACAAACACTCCGTCCTGTGACGTaGGGGCACAGTCCACAAGTTCAAGTGTTCGAATCTTGCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: AAWVASDPQTLRPVT*GHSPQVQVFESCSL Trigger: AAGGGAGCAAGATTCGAACACTTGAACTTGTGGACTGTGCCCTCACGTCACAGGACGGAGTGTTTGTGGGTCACTTGCTACCCAAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS TCA 90 bp | AGCTCAGGTCAAGCTTCTGTAGTGTCGCTAAATGACCTGACTGTATaGCAGAGGCCAGGAGAACCACATCCTCTGTCACCAGGGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSGQASVVSLNDLTV*QRPGEPHPLSPGSS Trigger: GCTGCTCCCTGGTGACAGAGGATGTGGTTCTCCTGGCCTCTGTCATACAGTCAGGTCATTTAGCGACACTACAGAAGCTTGACCTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS CCA 90 bp | TCCACAAGTTCAAGTGTTCGAATCTTGCTCCCTTGTTGGAATGTGTaGAGAACCCGAGGCAACTTCCCTCCCACCTGGCTGTTCCACGAC | + |
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Preference number: 5 (lower is better) Translates to: STSSSVRILLPCWNV*RTRGNFPPTWLFHD Trigger: GTCGTGGAACAGCCAGGTGGGAGGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGAACTTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS-3UTR CAA 90 bp | AGCATTAAGTCCTGTGGGGAACGAGTGCTGGATGGTGGGCTAAGTGTACACCTGGGAAAGGTCAAATACTaGGAGGCTCTGCAGCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: SIKSCGERVLDGGLSVHLGKVKY*EALQLG Trigger: CCCAAGCTGCAGAGCCTCCAAGTATTTGACCTTTCC...CAGGTGTACACTTAGCCCACCATCCAGCACTCGTTCCCCACAGGACTTAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS TCA 90 bp | AGTTCTTCGAGTTCAGGTGTCATTTCAAGGGCACCTCCCAGTGTTTaGACGTCCTCAGTGGTTAGTCTGCAGCTACTCAGCCTCAGGACT | + |
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Preference number: 5 (lower is better) Translates to: SSSSSGVISRAPPSV*TSSVVSLQLLSLRT Trigger: AGTCCTGAGGCTGAGTAGCTGCAGACTAACCACTGAGGACGTTCAAACACTGGGAGGTGCCCTTGAAATGACACCTGAACTCGAAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS-3UTR CAA 90 bp | ACACTGTTGCTGTCTTCAGACAAGAACCAGAAGAGGGCGTCAGATCACATTACGCCACCCAGTTCCTTGTaGCAGGAGAGGTCCAGTATC | + |
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Preference number: 5 (lower is better) Translates to: TLLLSSDKNQKRASDHITPPSSL*QERSSI Trigger: GATACTGGACCTCTCCTGCAACAAGGAACTGGGTGG...CGTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCTGAAGACAGCAACAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGGAACGAGTGCTGGATGGTGGGCTAAGTGTACACCTGAATAACTCATTTAATCTTGCTCCCTTGTaGGAATGTGTGGAGAACCCG | + |
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Preference number: 5 (lower is better) Translates to: CGERVLDGGLSVHLNNSFNLAPL*ECVENP Trigger: CGGGTTCTCCACACATTCCAACAAGGGAGCAAGATT...AAATGAGTTATTCAGGTGTACACTTAGCCCACCATCCAGCACTCGTTCCCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS TCA 90 bp | CTCAGACGTAGCACTCGAAGCAACCTTGACAAATGTAGTGTTTGTTaGAGCAGCTCCAGGTTCCCACCAACACACTTATTCCAGGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: LRRSTRSNLDKCSVC*SSSRFPPTHLFQER Trigger: CCTTTCCTGGAATAAGTGTGTTGGTGGGAACCTGGAGCTGCTTCAACAAACACTACATTTGTCAAGGTTGCTTCGAGTGCTACGTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS TCA 90 bp | GTATCCTCAGCACATCCAAGGATGCAAAGACACCATCCAGTAGTCTaGTGCTCTTTTGGGATAATCCACAGGAACGCAACTTCAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VSSAHPRMQRHHPVV*CSFGIIHRNATSVP Trigger: AGGAACTGAAGTTGCGTTCCTGTGGATTATCCCAAAAGAGCATCAGACTACTGGATGGTGTCTTTGCATCCTTGGATGTGCTGAGGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CCA 90 bp | TGGGTCACAGCACATAGTAAGTGGCTAAACCATTGTCCACAATCTTaGGAGCTTGAGGGTCGAAGGCTAATGTCTAGTTCAGTTAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: WVTAHSKWLNHCPQS*ELEGRRLMSSSVSS Trigger: AGAGCTAACTGAACTAGACATTAGCCTTCGACCCTCAAGCTCCCAAGATTGTGGACAATGGTTTAGCCACTTACTATGTGCTGTGACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS-3UTR CAA 90 bp | CATTTTCCCACCAGACTCAGCAACCTCAGTTCACATTCCCTCTCAGCAAAATTAGTTGACAGGATGCATTaGCTGAGTGAGCATGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: HFPTRLSNLSSHSLSAKLVDRMH*LSEHVE Trigger: CTCCACATGCTCACTCAGCAAATGCATCCTGTCAAC...TAATTTTGCTGAGAGGGAATGTGAACTGAGGTTGCTGAGTCTGGTGGGAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS CCA 90 bp | GGGATGACCCATCTTCTCATCTCTATCTCAGTGATCACAGGAAGTTaGGTCACAGCACATAGTAAGTGGCTAAACCATTGTCCACAATCT | + |
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Preference number: 5 (lower is better) Translates to: GMTHLLISISVITGS*VTAHSKWLNHCPQS Trigger: AGATTGTGGACAATGGTTTAGCCACTTACTATGTGCTGTGACCCAACTTCCTGTGATCACTGAGATAGAGATGAGAAGATGGGTCATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS-3UTR CAA 90 bp | CATTTTCCCACCAGACTCAGCAACCTCAGTTCACATTCCCTCTCAGCAAAATTATCCAGTTCTTCCAGGTaGGAGAGTAAAGGGATAATC | + |
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Preference number: 5 (lower is better) Translates to: HFPTRLSNLSSHSLSAKLSSSSR*ESKGII Trigger: GATTATCCCTTTACTCTCCAACCTGGAAGAACTGGA...TAATTTTGCTGAGAGGGAATGTGAACTGAGGTTGCTGAGTCTGGTGGGAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CAA 90 bp | CACCTCGGGATACCACTCCAGTGGGAATCAATTCTTCAATACATAAAATGTGGGCTCAGGACTTTTAACTaGTTGACAGGATGCATTTGC | + |
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Preference number: 5 (lower is better) Translates to: HLGIPLQWESILQYIKCGLRTFN*LTGCIC Trigger: GCAAATGCATCCTGTCAACAAGTTAAAAGTCCTGAG...CCCACATTTTATGTATTGAAGAATTGATTCCCACTGGAGTGGTATCCCGAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGGAACGAGTGCTGGATGGTGGGCTAAGTGTACACCTGAATAACTCATTTCCAATATTTCTGTTGTaGGAAAGGTCAAATACTTGG | + |
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Preference number: 5 (lower is better) Translates to: CGERVLDGGLSVHLNNSFPIFLL*ERSNTW Trigger: CCAAGTATTTGACCTTTCCAACAACAGAAATATTGG...AAATGAGTTATTCAGGTGTACACTTAGCCCACCATCCAGCACTCGTTCCCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS-3UTR CAA 90 bp | TACACTGTTGCTGTCTTCAGACAAGAACCAGAAGAGGGCGTCAGATCACATTACCTGCCAATATTTCTGTaGTTGGAAAGGTCAAATACT | + |
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Preference number: 5 (lower is better) Translates to: YTVAVFRQEPEEGVRSHYLPIFL*LERSNT Trigger: AGTATTTGACCTTTCCAACAACAGAAATATTGGCAG...GTAATGTGATCTGACGCCCTCTTCTGGTTCTTGTCTGAAGACAGCAACAGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108263.2 |
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| CDS CAA 72 bp | GCAGGCACATCCTCAAAGCCTCCACCCAGTTCCTTGTaGCAGGAGAGGTCCAGTATCCTCAGCACATCCAAG | + |
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Preference number: 6 (lower is better) Translates to: AGTSSKPPPSSL*QERSSILSTSK Trigger: CTTGGATGTGCTGAGGATACTGGACCTCTCCTGCAACAAGGAACTGGGTGGAGGCTTTGAGGATGTGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 90 bp | GAGGGCACAGTCCACAAGTTCAAGTGTTCGAATCTTGCTCCCTTGTaGGAATGTGTGGAGAACCCGAGGCAACTTCCCTCCCACCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: EGTVHKFKCSNLAPL*ECVENPRQLPSHLA Trigger: AGCCAGGTGGGAGGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGAACTTGTGGACTGTGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 90 bp | CGTGAGGGCACAGTCCACAAGTTCAAGTGTTCGAATCTTGCTCCCTaGTTGGAATGTGTGGAGAACCCGAGGCAACTTCCCTCCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: REGTVHKFKCSNLAP*LECVENPRQLPSHL Trigger: CAGGTGGGAGGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGAACTTGTGGACTGTGCCCTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS TCA 72 bp | CGTGGTCAAATCGAATCTCCCTTTGGTGGTCCTGGGTaGAGCAGTCTAGTTCTCTTTCCTGGAGGGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RGQIESPFGGPG*SSLVLFPGGLG Trigger: TCCCAGCCCTCCAGGAAAGAGAACTAGACTGCTTCACCCAGGACCACCAAAGGGAGATTCGATTTGACCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS CCA 72 bp | TCAAGTGTTCGAATCTTGCTCCCTTGTTGGAATGTGTaGAGAACCCGAGGCAACTTCCCTCCCACCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSVRILLPCWNV*RTRGNFPPTWL Trigger: CAGCCAGGTGGGAGGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CCA 72 bp | ACACTTATTCCAGGAAAGGTTGAGTATCTCCAGGGCTaGGAGGTACACAGAGGCGTCTGCAAGGGCTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: TLIPGKVEYLQG*EVHRGVCKGCE Trigger: TTCGCAGCCCTTGCAGACGCCTCTGTGTACCTCCCAGCCCTGGAGATACTCAACCTTTCCTGGAATAAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS CCA 72 bp | AGAGTAGGTTCTCTGAGGAGCCGCCCACGTCTCTGTTaGATGACAAGTCCAGTTCTTCCAGGTTGGAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: RVGSLRSRPRLC*MTSPVLPGWRV Trigger: TACTCTCCAACCTGGAAGAACTGGACTTGTCATCCAACAGAGACGTGGGCGGCTCCTCAGAGAACCTACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CCA 72 bp | TGGTGGTCCTGGGTGAAGCAGTCTAGTTCTCTTTCCTaGAGGGCTGGGATGACCCATCTTCTCATCTCTATC | + |
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Preference number: 6 (lower is better) Translates to: WWSWVKQSSSLS*RAGMTHLLISI Trigger: GATAGAGATGAGAAGATGGGTCATCCCAGCCCTCCAGGAAAGAGAACTAGACTGCTTCACCCAGGACCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS CAA 90 bp | TCCTGTGACGTGAGGGCACAGTCCACAAGTTCAAGTGTTCGAATCTaGCTCCCTTGTTGGAATGTGTGGAGAACCCGAGGCAACTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SCDVRAQSTSSSVRI*LPCWNVWRTRGNFP Trigger: AGGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGAACTTGTGGACTGTGCCCTCACGTCACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 90 bp | CTGTCACCAGGGAGCAGCTGCTCAGACGTAGCACTCGAAGCAACCTaGACAAATGTAGTGTTTGTTGAAGCAGCTCCAGGTTCCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: LSPGSSCSDVALEAT*TNVVFVEAAPGSHQ Trigger: TTGGTGGGAACCTGGAGCTGCTTCAACAAACACTACATTTGTCAAGGTTGCTTCGAGTGCTACGTCTGAGCAGCTGCTCCCTGGTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS TCA 72 bp | AGTTCAGGTGTCATTTCAAGGGCACCTCCCAGTGTTTaGACGTCCTCAGTGGTTAGTCTGCAGCTACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSGVISRAPPSV*TSSVVSLQLLS Trigger: GCTGAGTAGCTGCAGACTAACCACTGAGGACGTTCAAACACTGGGAGGTGCCCTTGAAATGACACCTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS TCA 72 bp | GTAGCAAGTGACCCACAAACACTCCGTCCTGTGACGTaGGGGCACAGTCCACAAGTTCAAGTGTTCGAATCT | + |
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Preference number: 6 (lower is better) Translates to: VASDPQTLRPVT*GHSPQVQVFES Trigger: AGATTCGAACACTTGAACTTGTGGACTGTGCCCTCACGTCACAGGACGGAGTGTTTGTGGGTCACTTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS TCA 72 bp | AATGATGTCACATCTCCTGCTGTCAGTGAGCACTGGTaGAGGTCCAGGACTTCCAGATGCTTCAGTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: NDVTSPAVSEHW*RSRTSRCFSDA Trigger: GGCATCACTGAAGCATCTGGAAGTCCTGGACCTTCACCAGTGCTCACTGACAGCAGGAGATGTGACATCATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CCA 72 bp | TCCACAAGTTCAAGTGTTCGAATCTTGCTCCCTTGTTaGAATGTGTGGAGAACCCGAGGCAACTTCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: STSSSVRILLPC*NVWRTRGNFPP Trigger: GGGAGGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGAACTTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CCA 72 bp | TGTTGGAAAGGTCAAATACTTGGAGGCTCTGCAGCTTaGGTAGCAAGTGACCCACAAACACTCCGTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CWKGQILGGSAA*VASDPQTLRPV Trigger: CACAGGACGGAGTGTTTGTGGGTCACTTGCTACCCAAGCTGCAGAGCCTCCAAGTATTTGACCTTTCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 72 bp | GTCCACAAGTTCAAGTGTTCGAATCTTGCTCCCTTGTaGGAATGTGTGGAGAACCCGAGGCAACTTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VHKFKCSNLAPL*ECVENPRQLPS Trigger: GGAGGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGAACTTGTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 72 bp | GGGAGCAGCTGCTCAGACGTAGCACTCGAAGCAACCTaGACAAATGTAGTGTTTGTTGAAGCAGCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GSSCSDVALEAT*TNVVFVEAAPG Trigger: ACCTGGAGCTGCTTCAACAAACACTACATTTGTCAAGGTTGCTTCGAGTGCTACGTCTGAGCAGCTGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS TCA 72 bp | CAAGCTTCTGTAGTGTCGCTAAATGACCTGACTGTATaGCAGAGGCCAGGAGAACCACATCCTCTGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: QASVVSLNDLTV*QRPGEPHPLSP Trigger: TGGTGACAGAGGATGTGGTTCTCCTGGCCTCTGTCATACAGTCAGGTCATTTAGCGACACTACAGAAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS GCA 72 bp | AAGAAAGCAGAGGTTTTGGCAGAGGATGGCCCATCCTaGATCACAGATACCGTCATTGTAGCTCAGGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KKAEVLAEDGPS*ITDTVIVAQVK Trigger: CTTGACCTGAGCTACAATGACGGTATCTGTGATGCAGGATGGGCCATCCTCTGCCAAAACCTCTGCTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS CCA 72 bp | TTTCAAGGGCACCTCCCAGTGTTTGAACGTCCTCAGTaGTTAGTCTGCAGCTACTCAGCCTCAGGACTTTTA | + |
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Preference number: 6 (lower is better) Translates to: FQGHLPVFERPQ*LVCSYSASGLL Trigger: TAAAAGTCCTGAGGCTGAGTAGCTGCAGACTAACCACTGAGGACGTTCAAACACTGGGAGGTGCCCTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 72 bp | ACAGTCCACAAGTTCAAGTGTTCGAATCTTGCTCCCTaGTTGGAATGTGTGGAGAACCCGAGGCAACTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TVHKFKCSNLAP*LECVENPRQLP Trigger: GGGAAGTTGCCTCGGGTTCTCCACACATTCCAACAAGGGAGCAAGATTCGAACACTTGAACTTGTGGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 90 bp | CTTAATCCTTGCGCTATGACCTCTAGACAGCTGCCAATATTTCTGTaGTTGGAAAGGTCAAATACTTGGAGGCTCTGCAGCTTGGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LNPCAMTSRQLPIFL*LERSNTWRLCSLGS Trigger: GCTACCCAAGCTGCAGAGCCTCCAAGTATTTGACCTTTCCAACAACAGAAATATTGGCAGCTGTCTAGAGGTCATAGCGCAAGGATTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 72 bp | TGCGCTATGACCTCTAGACAGCTGCCAATATTTCTGTaGTTGGAAAGGTCAAATACTTGGAGGCTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CAMTSRQLPIFL*LERSNTWRLCS Trigger: GCTGCAGAGCCTCCAAGTATTTGACCTTTCCAACAACAGAAATATTGGCAGCTGTCTAGAGGTCATAGCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS TCA 72 bp | AGCACTCGAAGCAACCTTGACAAATGTAGTGTTTGTTaGAGCAGCTCCAGGTTCCCACCAACACACTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: STRSNLDKCSVC*SSSRFPPTHLF Trigger: GAATAAGTGTGTTGGTGGGAACCTGGAGCTGCTTCAACAAACACTACATTTGTCAAGGTTGCTTCGAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS CCA 72 bp | GCACATAGTAAGTGGCTAAACCATTGTCCACAATCTTaGGAGCTTGAGGGTCGAAGGCTAATGTCTAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: AHSKWLNHCPQS*ELEGRRLMSSS Trigger: TGAACTAGACATTAGCCTTCGACCCTCAAGCTCCCAAGATTGTGGACAATGGTTTAGCCACTTACTATGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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| CDS CAA 72 bp | AGGTCCATTTCTAAGTCAAGAGGCATAACTCCAGGCTaGTCTCTACCGGGTTTCACCTTTGGAAGTTCTATG | + |
|
Preference number: 6 (lower is better) Translates to: RSISKSRGITPG*SLPGFTFGSSM Trigger: CATAGAACTTCCAAAGGTGAAACCCGGTAGAGACAAGCCTGGAGTTATGCCTCTTGACTTAGAAATGGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CAA 72 bp | GCTATGACCTCTAGACAGCTGCCAATATTTCTGTTGTaGGAAAGGTCAAATACTTGGAGGCTCTGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AMTSRQLPIFLL*ERSNTWRLCSL Trigger: CAAGCTGCAGAGCCTCCAAGTATTTGACCTTTCCAACAACAGAAATATTGGCAGCTGTCTAGAGGTCATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108263.2 ENSMUST00000126658.8 |
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| CDS CCA 72 bp | CATCTTCTCATCTCTATCTCAGTGATCACAGGAAGTTaGGTCACAGCACATAGTAAGTGGCTAAACCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: HLLISISVITGS*VTAHSKWLNHC Trigger: ACAATGGTTTAGCCACTTACTATGTGCTGTGACCCAACTTCCTGTGATCACTGAGATAGAGATGAGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126658.8 |
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