Pregenerated sensors for LRRC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051652Ensembl transcript IDs: ENSMUST00000057608.5
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCTCATCCAGGGCTCTGTTCACCCTGCAGATGCCAGGCATGGTaGCCCCACGGTCACCATGTAGGTGTGGGCATTCAGCAGTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GAHPGLCSPCRCQAW*PHGHHVGVGIQQWG Trigger: TCCCCACTGCTGAATGCCCACACCTACATGGTGACCGTGGGGCCACCATGCCTGGCATCTGCAGGGTGAACAGAGCCCTGGATGAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR CCA 90 bp | TTGGGAGCTCATCCAGGGCTCTGTTCACCCTGCAGATGCCAGGCATaGTGGCCCCACGGTCACCATGTAGGTGTGGGCATTCAGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: LGAHPGLCSPCRCQA*WPHGHHVGVGIQQW Trigger: CCACTGCTGAATGCCCACACCTACATGGTGACCGTGGGGCCACCATGCCTGGCATCTGCAGGGTGAACAGAGCCCTGGATGAGCTCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR GCA 90 bp | TGGCAAAACTGCTGGCGCCATCCTCCCTGCCAGGGCCCCCATCCTTaGGTGCACAAGTATTTACTTCCCACAGCATGGTGTGGGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: WQNCWRHPPCQGPHP*VHKYLLPTAWCGKG Trigger: CCCTTTCCCACACCATGCTGTGGGAAGTAAATACTTGTGCACGCAAGGATGGGGGCCCTGGCAGGGAGGATGGCGCCAGCAGTTTTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR GCA 90 bp | AGAATAGTGGACAGCTTGGGAGCTCATCCAGGGCTCTGTTCACCCTaGAGATGCCAGGCATGGTGGCCCCACGGTCACCATGTAGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: RIVDSLGAHPGLCSP*RCQAWWPHGHHVGV Trigger: CACACCTACATGGTGACCGTGGGGCCACCATGCCTGGCATCTGCAGGGTGAACAGAGCCCTGGATGAGCTCCCAAGCTGTCCACTATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR GCA 90 bp | AAAACTGCTGGCGCCATCCTCCCTGCCAGGGCCCCCATCCTTGCGTaGACAAGTATTTACTTCCCACAGCATGGTGTGGGAAAGGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: KTAGAILPARAPILA*TSIYFPQHGVGKGG Trigger: ACCTCCCTTTCCCACACCATGCTGTGGGAAGTAAATACTTGTGCACGCAAGGATGGGGGCCCTGGCAGGGAGGATGGCGCCAGCAGTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR TCA 90 bp | CTTATAGGAGGACAGGGCATGCTCTCTCCAGGGTCCATACTCTCCTaGGTCTCCCATCTCCTCTTTCCAGCAAGGGCTGAGCAGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LIGGQGMLSPGSILS*VSHLLFPARAEQEL Trigger: CAGCTCCTGCTCAGCCCTTGCTGGAAAGAGGAGATGGGAGACTCAGGAGAGTATGGACCCTGGAGAGAGCATGCCCTGTCCTCCTATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR CCA 90 bp | CAGGGCCCCCATCCTTGCGTGCACAAGTATTTACTTCCCACAGCATaGTGTGGGAAAGGGAGGTTGGCAGATCAGACGGCTCACAGACCT | + |
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Preference number: 1 (lower is better) Translates to: QGPHPCVHKYLLPTA*CGKGRLADQTAHRP Trigger: AGGTCTGTGAGCCGTCTGATCTGCCAACCTCCCTTTCCCACACCATGCTGTGGGAAGTAAATACTTGTGCACGCAAGGATGGGGGCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR TCA 90 bp | CCAGGACAAAGGTCAGAGCAGACCAGTGCAGGCTGGACTTTGCACTaGCCTCTCTGGAAAGGTCTAGATTGCCGGTACTTTGCTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: PGQRSEQTSAGWTLH*PLWKGLDCRYFALG Trigger: TCCCAGAGCAAAGTACCGGCAATCTAGACCTTTCCAGAGAGGTCAGTGCAAAGTCCAGCCTGCACTGGTCTGCTCTGACCTTTGTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR TCA 90 bp | ATAGAAGTGGCAGAAGCTGAGGCAGCCCATAAGTGGTCTAGCAGCTaGCACGGCCATGGTGAGCCCATGCTGGACCTTTCTCACGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: IEVAEAEAAHKWSSS*HGHGEPMLDLSHVS Trigger: AGAAACGTGAGAAAGGTCCAGCATGGGCTCACCATGGCCGTGTCAGCTGCTAGACCACTTATGGGCTGCCTCAGCTTCTGCCACTTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR GCA 90 bp | ACGGTAAGGACCAAGTCAGGCCAGGCCCCCAACATAGTCTCACCTTaGCCCTGCAGATCACAAGAAAATTCCCAGCACACACAGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: TVRTKSGQAPNIVSP*PCRSQENSQHTQKP Trigger: TGGCTTCTGTGTGTGCTGGGAATTTTCTTGTGATCTGCAGGGGCAAGGTGAGACTATGTTGGGGGCCTGGCCTGACTTGGTCCTTACCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR GCA 90 bp | AAGCTGGTGGAAGCAGGTGGGATCCAGGGAGAAAGACAGTTTCAATaGAACCATCCACATCTGCAAGTCTCCAGCAGAGGCTCCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: KLVEAGGIQGERQFQ*NHPHLQVSSRGSSL Trigger: GAGGCTGGAGCCTCTGCTGGAGACTTGCAGATGTGGATGGTTGCATTGAAACTGTCTTTCTCCCTGGATCCCACCTGCTTCCACCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR TCA 90 bp | ATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATCACAACGTTaGCTGGTGTCCCTAAGGAGGCTGCTTCGAGGTTCCAATTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: IEHVCANGGQAASQR*LVSLRRLLRGSNSH Trigger: ATGAGAATTGGAACCTCGAAGCAGCCTCCTTAGGGACACCAGTCAACGTTGTGATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR TCA 90 bp | ACCCTCCAGGGTCCAAATCATACAGCCCTCAGCACCTGCCTCCTCTaGACACTTAACTGGGTACTGGGTATTGAGCATGTCTGTGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: TLQGPNHTALSTCLL*TLNWVLGIEHVCAN Trigger: ATTGGCACAGACATGCTCAATACCCAGTACCCAGTTAAGTGTTCAGAGGAGGCAGGTGCTGAGGGCTGTATGATTTGGACCCTGGAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR CCA 90 bp | TGCACAAGTATTTACTTCCCACAGCATGGTGTGGGAAAGGGAGGTTaGCAGATCAGACGGCTCACAGACCTATACCACAAACAGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CTSIYFPQHGVGKGG*QIRRLTDLYHKQPG Trigger: CCCAGGCTGTTTGTGGTATAGGTCTGTGAGCCGTCTGATCTGCCAACCTCCCTTTCCCACACCATGCTGTGGGAAGTAAATACTTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR TCA 90 bp | AGTCCTGAGAGCTGCCACAGGCTCAGAACATTCCATCTCAGTCTGTaGCTTACCACCCCTCAACCTCTAACCCCACCCAAGGATTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: SPESCHRLRTFHLSL*LTTPQPLTPPKDFN Trigger: ATTGAAATCCTTGGGTGGGGTTAGAGGTTGAGGGGTGGTAAGTCACAGACTGAGATGGAATGTTCTGAGCCTGTGGCAGCTCTCAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR TCA 90 bp | GAGGTGAAGAGAAGGTTCTTGTTGCTAGAGAAAAGCAGTTCCTGTTaGCTGGCATGGCAACCTCAAACTTCAGTCCCTCCTCTTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: EVKRRFLLLEKSSSC*LAWQPQTSVPPLSE Trigger: TTCAGAAAGAGGAGGGACTGAAGTTTGAGGTTGCCATGCCAGTCAACAGGAACTGCTTTTCTCTAGCAACAAGAACCTTCTCTTCACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR GCA 90 bp | ATCACAAGAAAATTCCCAGCACACACAGAAGCCACATTCAATTTCTaGTCAGAGCGGCATCTAGACCCTATACTCAGCACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: ITRKFPAHTEATFNF*SERHLDPILSTHTH Trigger: GTGTGTGTGTGTGCTGAGTATAGGGTCTAGATGCCGCTCTGAGCAGAAATTGAATGTGGCTTCTGTGTGTGCTGGGAATTTTCTTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR TCA 90 bp | TCTACCCCTGAAGATGAAGTAATTACAGGTAAGAAAGTTGATCAGTaGGCTCTGGGATTTCAGCGAGGTGAAGAGAAGGTTCTTGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: STPEDEVITGKKVDQ*ALGFQRGEEKVLVA Trigger: AGCAACAAGAACCTTCTCTTCACCTCGCTGAAATCCCAGAGCTCACTGATCAACTTTCTTACCTGTAATTACTTCATCTTCAGGGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR GCA 90 bp | CTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGGGGCTCTGTTCACCCTaGAGATGCCAGGCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LPPNLCPCLEAATVPTTWGLCSP*RCQAWW Trigger: CCACCATGCCTGGCATCTGCAGGGTGAACAGAGCCC...CCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR GCA 90 bp | CTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGCTGGGATTAAAGGCGTaGGCCACCACTGCCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LPPNLCPCLEAATVPTTWLGLKA*ATTAWL Trigger: GAGCCAGGCAGTGGTGGCGCACGCCTTTAATCCCAG...CCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAGCTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCTGGGTACTGGGTATTaGGCATGTCTGTGCCAATGG | + |
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Preference number: 2 (lower is better) Translates to: GPATSQLVPLPGSSYRPHLGTGY*ACLCQW Trigger: CCATTGGCACAGACATGCTCAATACCCAGTACCCAG...GTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAGCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAGCTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCTTGGCCCAGGGCTGTaGAAGAATAGTGGACAGCTT | + |
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Preference number: 2 (lower is better) Translates to: GPATSQLVPLPGSSYRPHLGPGL*KNSGQL Trigger: AAGCTGTCCACTATTCTTCCACAGCCCTGGGCCAAG...GTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAGCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAGCTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACGGGATTTCAGCGAGGTaGAGAGAAGGTTCTTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: GPATSQLVPLPGSSYRPHGISAR*REGSCC Trigger: GCAACAAGAACCTTCTCTTCACCTCGCTGAAATCCC...GTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAGCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR GCA 90 bp | GTCCCTAAGGAGGCTGCTTCGAGGTTCCAATTCTCATGGGAATGGGAATGGTCCTGGCGCCATCCTCCCTaGCAGGGCCCCCATCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: VPKEAASRFQFSWEWEWSWRHPP*QGPHPC Trigger: GCAAGGATGGGGGCCCTGGCAGGGAGGATGGCGCCA...GGACCATTCCCATTCCCATGAGAATTGGAACCTCGAAGCAGCCTCCTTAGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAGCTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACACTCAGAAATCTGCCTaGCTCTGCCTCTCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GPATSQLVPLPGSSYRPHTQKSA*LCLSSA Trigger: AGCACTTGAGAGGCAGAGGCAGGCAGATTTCTGAGT...GTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAGCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR CAA 90 bp | GTGGCAAAACTGCTGGCGCCATCCTCCCTGCCAGGGCCCCCATCCTaGCGTGCACAAGTATTTACTTCCCACAGCATGGTGTGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: VAKLLAPSSLPGPPS*RAQVFTSHSMVWER Trigger: CCTTTCCCACACCATGCTGTGGGAAGTAAATACTTGTGCACGCAAGGATGGGGGCCCTGGCAGGGAGGATGGCGCCAGCAGTTTTGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAGCTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACTGCCTGGCTCAGCTCTaGCTTTTTAACCTCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GPATSQLVPLPGSSYRPHCLAQL*LFNLFS Trigger: GGAAAAGAGGTTAAAAAGCCAGAGCTGAGCCAGGCA...GTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAGCTGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR CAA 90 bp | AGACAGTGTAGCTTGGCCCAGGGCTGTGGAAGAATAGTGGACAGCTaGGGAGCTCATCCAGGGCTCTGTTCACCCTGCAGATGCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RQCSLAQGCGRIVDS*GAHPGLCSPCRCQA Trigger: TGCCTGGCATCTGCAGGGTGAACAGAGCCCTGGATGAGCTCCCAAGCTGTCCACTATTCTTCCACAGCCCTGGGCCAAGCTACACTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGACTGACCCAGAGTCCTGGAGATCTAGAGGGTCTGTGCAGAGTTGGGGGGAAGACAGTGTAGCTTaGCCCAGGGCTGTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GRTDPESWRSRGSVQSWGEDSVA*PRAVEE Trigger: TTCTTCCACAGCCCTGGGCCAAGCTACACTGTCTTC...CCCCCAACTCTGCACAGACCCTCTAGATCTCCAGGACTCTGGGTCAGTCCTCCC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR CAA 90 bp | CGCCACCACTGCCTGGCTCAGCTCTGGCTTTTTAACCTCTTTTCCTaGGCACAGCACCCTCCAGGGTCCAAATCATACAGCCCTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RHHCLAQLWLFNLFS*AQHPPGSKSYSPQH Trigger: GTGCTGAGGGCTGTATGATTTGGACCCTGGAGGGTGCTGTGCCAAGGAAAAGAGGTTAAAAAGCCAGAGCTGAGCCAGGCAGTGGTGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGACTGACCCAGAGTCCTGGAGATCTAGAGGGTCTGTGCAGAGTTGGGGGAAGTGTGTCACATGGTaGCAGAACTGTGGGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: GRTDPESWRSRGSVQSWGKCVTW*QNCGSH Trigger: GTGTGACCCACAGTTCTGTCACCATGTGACACACTT...CCCCCAACTCTGCACAGACCCTCTAGATCTCCAGGACTCTGGGTCAGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGACTGACCCAGAGTCCTGGAGATCTAGAGGGTCTGTGCAGAGTTGGGGGCAGGGCCCCCATCCTTaGGTGCACAAGTATTTACTT | + |
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Preference number: 2 (lower is better) Translates to: GRTDPESWRSRGSVQSWGQGPHP*VHKYLL Trigger: AAGTAAATACTTGTGCACGCAAGGATGGGGGCCCTG...CCCCCAACTCTGCACAGACCCTCTAGATCTCCAGGACTCTGGGTCAGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGACTGACCCAGAGTCCTGGAGATCTAGAGGGTCTGTGCAGAGTTGGGGGTTACTTCCCACAGCATaGTGTGGGAAAGGGAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GRTDPESWRSRGSVQSWGLLPTA*CGKGRL Trigger: CAACCTCCCTTTCCCACACCATGCTGTGGGAAGTAA...CCCCCAACTCTGCACAGACCCTCTAGATCTCCAGGACTCTGGGTCAGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGAGTCTCCCATCTCCTCTTTCCAGCAAGGGCTGAGCAGGAGCTGTATATGCAGATGCCAGGCATaGTGGCCCCACGGTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: SPESPISSFQQGLSRSCICRCQA*WPHGHH Trigger: ATGGTGACCGTGGGGCCACCATGCCTGGCATCTGCA...TATACAGCTCCTGCTCAGCCCTTGCTGGAAAGAGGAGATGGGAGACTCAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGACTGACCCAGAGTCCTGGAGATCTAGAGGGTCTGTGCAGAGTTGGGGGTTAACCTCTTTTCCTTaGCACAGCACCCTCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GRTDPESWRSRGSVQSWGLTSFP*HSTLQG Trigger: ACCCTGGAGGGTGCTGTGCCAAGGAAAAGAGGTTAA...CCCCCAACTCTGCACAGACCCTCTAGATCTCCAGGACTCTGGGTCAGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR CAA 90 bp | CCCTCAGCACCTGCCTCCTCTGAACACTTAACTGGGTACTGGGTATaGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATCACAACGTT | + |
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Preference number: 2 (lower is better) Translates to: PSAPASSEHLTGYWV*SMSVPMGARQHHNV Trigger: AACGTTGTGATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCCAGTTAAGTGTTCAGAGGAGGCAGGTGCTGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAGCAGAGGCTCCAGCCTCATACACTTAGCCTGTGAGTTGGTCATGGGAGGTTTAAGTGGCAGCTaGAGCCAGCCTTGGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSSRGSSLIHLACELVMGGLSGS*SQPWQG Trigger: TCCTTGCCAAGGCTGGCTTCAGCTGCCACTTAAACC...TCCCATGACCAACTCACAGGCTAAGTGTATGAGGCTGGAGCCTCTGCTGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAGCAGAGGCTCCAGCCTCATACACTTAGCCTGTGAGTTGGTCATGGGAAGACCAGGCTGGCCTTaGACTCAGAAATCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VSSRGSSLIHLACELVMGRPGWP*TQKSAC Trigger: GCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCT...TCCCATGACCAACTCACAGGCTAAGTGTATGAGGCTGGAGCCTCTGCTGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | GCACTGGCACCTCCCAGAGTATGTGTCAGGCTAGAGGTGTCCCTGTCCATGGGATCCACTGCCCAGGAATaGATAGAAGTGGCAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ALAPPRVCVRLEVSLSMGSTAQE*IEVAEA Trigger: AGCTTCTGCCACTTCTATCCATTCCTGGGCAGTGGA...TCCCATGGACAGGGACACCTCTAGCCTGACACATACTCTGGGAGGTGCCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGACTGACCCAGAGTCCTGGAGATCTAGAGGGTCTGTGCAGAGTTGGGGGAAGAAAGTTGATCAGTaGGCTCTGGGATTTCAGCGA | + |
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Preference number: 2 (lower is better) Translates to: GRTDPESWRSRGSVQSWGKKVDQ*ALGFQR Trigger: TCGCTGAAATCCCAGAGCTCACTGATCAACTTTCTT...CCCCCAACTCTGCACAGACCCTCTAGATCTCCAGGACTCTGGGTCAGTCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCTGGCTCAGCTCTGGCTTTTTAACCTCTTTTCCTTGGCACAGCACCCTCGTCAGAGCAGACCAGTaGAGGCTGGACTTTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: TAWLSSGFLTSFPWHSTLVRADQ*RLDFAL Trigger: CAGTGCAAAGTCCAGCCTGCACTGGTCTGCTCTGAC...GAGGGTGCTGTGCCAAGGAAAAGAGGTTAAAAAGCCAGAGCTGAGCCAGGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGCCTGGCTCAGCTCTGGCTTTTTAACCTCTTTTCCTTGGCACAGCACCCTCGTGGGAAAGGGAGGTTaGCAGATCAGACGGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: TAWLSSGFLTSFPWHSTLVGKGG*QIRRLT Trigger: TGTGAGCCGTCTGATCTGCCAACCTCCCTTTCCCAC...GAGGGTGCTGTGCCAAGGAAAAGAGGTTAAAAAGCCAGAGCTGAGCCAGGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | GCACTGGCACCTCCCAGAGTATGTGTCAGGCTAGAGGTGTCCCTGTCCATGGGATGTGTTCAGATGTACTaGGAGAGCAGGGGTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: ALAPPRVCVRLEVSLSMGCVQMY*ESRGKQ Trigger: CTGTTTACCCCTGCTCTCCCAGTACATCTGAACACA...TCCCATGGACAGGGACACCTCTAGCCTGACACATACTCTGGGAGGTGCCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTTTTCTCCCTCTCGATaGACTGACATTTTGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: LPPNLCPCLEAATVPTTWFSPSR*TDILAQ Trigger: TTGTGCCAAAATGTCAGTCCATCGAGAGGGAGAAAA...CCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGAGTCTCCCATCTCCTCTTTCCAGCAAGGGCTGAGCAGGAGCTGTATACCATACCCTCTGCACTaGCACCTCCCAGAGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: SPESPISSFQQGLSRSCIPYPLH*HLPEYV Trigger: CACATACTCTGGGAGGTGCCAGTGCAGAGGGTATGG...TATACAGCTCCTGCTCAGCCCTTGCTGGAAAGAGGAGATGGGAGACTCAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR GCA 90 bp | GGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATCACAACGCCACATTCAATTTCTaGTCAGAGCGGCATCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: GYWVLSMSVPMGARQHHNATFNF*SERHLD Trigger: GTCTAGATGCCGCTCTGAGCAGAAATTGAATGTGGC...GTTGTGATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAAGTCTCACCTTGCCCCTaGAGATCACAAGAAAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: VPLPGSSYRPHHMVIGMQVSPCP*RSQENS Trigger: GGAATTTTCTTGTGATCTGCAGGGGCAAGGTGAGAC...TTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAATTGAACTCAGAAATCTaGCTGCCTCTGCCTCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: VPLPGSSYRPHHMVIGMQLNSEI*LPLPLK Trigger: CTTGAGAGGCAGAGGCAGGCAGATTTCTGAGTTCAA...TTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAAGTGGGCATTCAGCAGTaGGGAAAGTCTGGAATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: VPLPGSSYRPHHMVIGMQVGIQQ*GKSGIH Trigger: ATGAATTCCAGACTTTCCCCACTGCTGAATGCCCAC...TTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGTCTGTGCAGAGTTGGGGGAGGAGAATATCTCATTCAAGGAGAGAAGGAAGGTGCGCCACCACTGCCTaGCTCAGCTCTGGCTTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: GSVQSWGRRISHSRREGRCATTA*LSSGFL Trigger: TAAAAAGCCAGAGCTGAGCCAGGCAGTGGTGGCGCA...CCTTCCTTCTCTCCTTGAATGAGATATTCTCCTCCCCCAACTCTGCACAGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CAA 90 bp | GTGCACAAGTATTTACTTCCCACAGCATGGTGTGGGAAAGGGAGGTaGGCAGATCAGACGGCTCACAGACCTATACCACAAACAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VHKYLLPTAWCGKGR*ADQTAHRPIPQTAW Trigger: CCAGGCTGTTTGTGGTATAGGTCTGTGAGCCGTCTGATCTGCCAACCTCCCTTTCCCACACCATGCTGTGGGAAGTAAATACTTGTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCTGTGCAGAGTTGGGGGAGGAGAATATCTCATTCAAGGAGAGAAGGAAGGGCCATGGTGAGCCCATaGTGGACCTTTCTCACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: GSVQSWGRRISHSRREGRAMVSP*WTFLTF Trigger: AAACGTGAGAAAGGTCCAGCATGGGCTCACCATGGC...CCTTCCTTCTCTCCTTGAATGAGATATTCTCCTCCCCCAACTCTGCACAGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAAGCCATAATGGTGACAGAACTGTaGGTCACACTGACGGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LPGSSYRPHHMVIGMQAIMVTEL*VTLTVR Trigger: CCTTACCGTCAGTGTGACCCACAGTTCTGTCACCAT...TATGGCTTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAAAGGTTCCAATTCTCATaGGAATGGGAATGGTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: VPLPGSSYRPHHMVIGMQRFQFS*EWEWSY Trigger: GTAGGACCATTCCCATTCCCATGAGAATTGGAACCT...TTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CCA 90 bp | TTAACTGGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATGCAGTTCCTGTTGACTaGCATGGCAACCTCAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: LTGYWVLSMSVPMGARQHAVPVD*HGNLKL Trigger: AAGTTTGAGGTTGCCATGCCAGTCAACAGGAACTGC...ATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCCAGTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCCAGCAGAGGCTCCAGCCTCATACACTTAGCCTGTGAGTTGGTCATGGGAAGTCCCTCCTCTTTCTaGAAAAACAGCTGCTTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: VSSRGSSLIHLACELVMGSPSSF*KNSCFR Trigger: TCTAAAGCAGCTGTTTTTTCAGAAAGAGGAGGGACT...TCCCATGACCAACTCACAGGCTAAGTGTATGAGGCTGGAGCCTCTGCTGGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGAAAGTTGATCAGTGAGCTCTGGGATTTCAGCGAGGTGAAGAGAAGGTTCTCCCTCTCGATGGACTaGCATTTTGGCACAAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VRKLISELWDFSEVKRRFSLSMD*HFGTRA Trigger: TGCCCTTGTGCCAAAATGTCAGTCCATCGAGAGGGA...GAACCTTCTCTTCACCTCGCTGAAATCCCAGAGCTCACTGATCAACTTTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGAAAGTTGATCAGTGAGCTCTGGGATTTCAGCGAGGTGAAGAGAAGGTTCGCCCCCATCCTTGCGTaGACAAGTATTTACTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: VRKLISELWDFSEVKRRFAPILA*TSIYFP Trigger: TGGGAAGTAAATACTTGTGCACGCAAGGATGGGGGC...GAACCTTCTCTTCACCTCGCTGAAATCCCAGAGCTCACTGATCAACTTTCTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR GCA 72 bp | GACAGCTTGGGAGCTCATCCAGGGCTCTGTTCACCCTaGAGATGCCAGGCATGGTGGCCCCACGGTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: DSLGAHPGLCSP*RCQAWWPHGHH Trigger: ATGGTGACCGTGGGGCCACCATGCCTGGCATCTGCAGGGTGAACAGAGCCCTGGATGAGCTCCCAAGCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR GCA 72 bp | TTGGGAGCTCATCCAGGGCTCTGTTCACCCTGCAGATaGCAGGCATGGTGGCCCCACGGTCACCATGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LGAHPGLCSPCR*QAWWPHGHHVG Trigger: ACCTACATGGTGACCGTGGGGCCACCATGCCTGGCATCTGCAGGGTGAACAGAGCCCTGGATGAGCTCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | CATCCAGGGCTCTGTTCACCCTGCAGATGCCAGGCATaGTGGCCCCACGGTCACCATGTAGGTGTGGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: HPGLCSPCRCQA*WPHGHHVGVGI Trigger: AATGCCCACACCTACATGGTGACCGTGGGGCCACCATGCCTGGCATCTGCAGGGTGAACAGAGCCCTGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | GTCTGTGCCAATGGGGGCCAGGCAGCATCACAACGTTaGCTGGTGTCCCTAAGGAGGCTGCTTCGAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VCANGGQAASQR*LVSLRRLLRGS Trigger: GGAACCTCGAAGCAGCCTCCTTAGGGACACCAGTCAACGTTGTGATGCTGCCTGGCCCCCATTGGCACAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR GCA 72 bp | TGCTGGCGCCATCCTCCCTGCCAGGGCCCCCATCCTTaGGTGCACAAGTATTTACTTCCCACAGCATGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CWRHPPCQGPHP*VHKYLLPTAWC Trigger: ACACCATGCTGTGGGAAGTAAATACTTGTGCACGCAAGGATGGGGGCCCTGGCAGGGAGGATGGCGCCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | GCAGAAGCTGAGGCAGCCCATAAGTGGTCTAGCAGCTaGCACGGCCATGGTGAGCCCATGCTGGACCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AEAEAAHKWSSS*HGHGEPMLDLS Trigger: AGAAAGGTCCAGCATGGGCTCACCATGGCCGTGTCAGCTGCTAGACCACTTATGGGCTGCCTCAGCTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATCACAACAGAATAGTGGACAGCTaGGGAGCTCATCCAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GYWVLSMSVPMGARQHHNRIVDS*GAHPGL Trigger: GAGCCCTGGATGAGCTCCCAAGCTGTCCACTATTCT...GTTGTGATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTGAGTCTCCCATCTCCTCTTTCCAGCAAGGGCTGAGCAGGAGCTGTATACAGCTACCTCCCAACTaGTGCCCCTGCCTGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPESPISSFQQGLSRSCIQLPPN*CPCLEA Trigger: TGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAGCTG...TATACAGCTCCTGCTCAGCCCTTGCTGGAAAGAGGAGATGGGAGACTCAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCCAGCAGAGGCTCCAGCCTCATACACTTAGCCTGTGAGTTGGTCATGGGATCTGAGGCAGCAGGGTaGGAAGCTTGGATGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSSRGSSLIHLACELVMGSEAAG*EAWMSR Trigger: CCTGCTCATCCAAGCTTCCAACCCTGCTGCCTCAGA...TCCCATGACCAACTCACAGGCTAAGTGTATGAGGCTGGAGCCTCTGCTGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | AGCCTCAGGCAAGTGTGTCACATGGTGACAGAACTGTaGGTCACACTGACGGTAAGGACCAAGTCAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLRQVCHMVTEL*VTLTVRTKSGQ Trigger: CTGGCCTGACTTGGTCCTTACCGTCAGTGTGACCCACAGTTCTGTCACCATGTGACACACTTGCCTGAGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | TCAGCACCTGCCTCCTCTGAACACTTAACTGGGTACTaGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SAPASSEHLTGY*VLSMSVPMGAR Trigger: CCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCCAGTTAAGTGTTCAGAGGAGGCAGGTGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | GAGGGAAAGTGCCCAAAGGAGCCAGTGGGTGGGACCTaGGATGATAGGTTTATACTGATGGGGGTGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: EGKCPKEPVGGT*DDRFILMGVRM Trigger: CATCCTCACCCCCATCAGTATAAACCTATCATCCCAGGTCCCACCCACTGGCTCCTTTGGGCACTTTCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAAGCCATACAGCTGAAGCCAGCCTaGGCAAGGAGTTCCGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPGSSYRPHHMVIGMQAIQLKPA*ARSSVS Trigger: AGAAACGGAACTCCTTGCCAAGGCTGGCTTCAGCTG...TATGGCTTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | AGCTGCCACAGGCTCAGAACATTCCATCTCAGTCTGTaGCTTACCACCCCTCAACCTCTAACCCCACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCHRLRTFHLSL*LTTPQPLTPPK Trigger: CTTGGGTGGGGTTAGAGGTTGAGGGGTGGTAAGTCACAGACTGAGATGGAATGTTCTGAGCCTGTGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR GCA 72 bp | ACCAAGTCAGGCCAGGCCCCCAACATAGTCTCACCTTaGCCCTGCAGATCACAAGAAAATTCCCAGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: TKSGQAPNIVSP*PCRSQENSQHT Trigger: TGTGTGCTGGGAATTTTCTTGTGATCTGCAGGGGCAAGGTGAGACTATGTTGGGGGCCTGGCCTGACTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | GCCTGGCTCAGCTCTGGCTTTTTAACCTCTTTTCCTTaGCACAGCACCCTCCAGGGTCCAAATCATACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AWLSSGFLTSFP*HSTLQGPNHTA Trigger: GGCTGTATGATTTGGACCCTGGAGGGTGCTGTGCCAAGGAAAAGAGGTTAAAAAGCCAGAGCTGAGCCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | ATTAAAGGCGTGCGCCACCACTGCCTGGCTCAGCTCTaGCTTTTTAACCTCTTTTCCTTGGCACAGCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: IKGVRHHCLAQL*LFNLFSLAQHP Trigger: AGGGTGCTGTGCCAAGGAAAAGAGGTTAAAAAGCCAGAGCTGAGCCAGGCAGTGGTGGCGCACGCCTTTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAACGATGGACTGACATTTaGGCACAAGGGCAACTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPLPGSSYRPHHMVIGMQRWTDI*AQGQLK Trigger: CTTTAGTTGCCCTTGTGCCAAAATGTCAGTCCATCG...TTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | ACCTATACCACAAACAGCCTGGGTTTAAGTGGCAGCTaGAGCCAGCCTTGGCAAGGAGTTCCGTTTCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: TYTTNSLGLSGS*SQPWQGVPFLS Trigger: CGAGAGAAACGGAACTCCTTGCCAAGGCTGGCTTCAGCTGCCACTTAAACCCAGGCTGTTTGTGGTATAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | AATGACATGGAATGGGACGACAGGGAGATAAGACTCTaGGGCAGCAGGGTTGGAAGCTTGGATGAGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NDMEWDDREIRL*GSRVGSLDEQE Trigger: CTCCTGCTCATCCAAGCTTCCAACCCTGCTGCCTCAGAGTCTTATCTCCCTGTCGTCCCATTCCATGTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | CTCCAGCAGAGGCTCCAGCCTCATACACTTAGCCTGTaGGTTGGTCATGGGAAGGAAGGGAAGGGTATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LQQRLQPHTLSL*VGHGKEGKGIY Trigger: ATAGATACCCTTCCCTTCCTTCCCATGACCAACTCACAGGCTAAGTGTATGAGGCTGGAGCCTCTGCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | AGAGAGGCTGGGAGAGGACAGAATCAGGTTCGGGGCTaGGCTTCCAAGAAAGGCAACATAGAAGCCATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: REAGRGQNQVRG*ASKKGNIEAIL Trigger: TAGGATGGCTTCTATGTTGCCTTTCTTGGAAGCTCAGCCCCGAACCTGATTCTGTCCTCTCCCAGCCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR GCA 72 bp | GGACTGACCCAGAGTCCTGGAGATCTAGAGGGTCTGTaGAGAGTTGGGGGAGGAGAATATCTCATTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GLTQSPGDLEGL*RVGGGEYLIQG Trigger: TCCTTGAATGAGATATTCTCCTCCCCCAACTCTGCACAGACCCTCTAGATCTCCAGGACTCTGGGTCAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | TTGCGTGCACAAGTATTTACTTCCCACAGCATGGTGTaGGAAAGGGAGGTTGGCAGATCAGACGGCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRAQVFTSHSMV*EREVGRSDGSQ Trigger: CTGTGAGCCGTCTGATCTGCCAACCTCCCTTTCCCACACCATGCTGTGGGAAGTAAATACTTGTGCACGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTGAGTCTCCCATCTCCTCTTTCCAGCAAGGGCTGAGCAGGAGCTGTATAGAAAAGCAGTTCCTGTaGACTGGCATGGCAACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPESPISSFQQGLSRSCIEKQFL*TGMATS Trigger: TGAGGTTGCCATGCCAGTCAACAGGAACTGCTTTTC...TATACAGCTCCTGCTCAGCCCTTGCTGGAAAGAGGAGATGGGAGACTCAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCTAAGGAGGCTGCTTCGAGGTTCCAATTCTCATGGGAATGGGAATGGTCCCAACATAGTCTCACCTaGCCCCTGCAGATCACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VPKEAASRFQFSWEWEWSQHSLT*PLQITR Trigger: TCTTGTGATCTGCAGGGGCAAGGTGAGACTATGTTG...GGACCATTCCCATTCCCATGAGAATTGGAACCTCGAAGCAGCCTCCTTAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | GGTCCAAATCATACAGCCCTCAGCACCTGCCTCCTCTaGACACTTAACTGGGTACTGGGTATTGAGCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: GPNHTALSTCLL*TLNWVLGIEHV Trigger: GACATGCTCAATACCCAGTACCCAGTTAAGTGTTCAGAGGAGGCAGGTGCTGAGGGCTGTATGATTTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | ACACCGGTGTATCTAAAAGACCCAATAGGGTGTTTCTaGGACAAGAGCAGCTACAGACTTCACCACCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TPVYLKDPIGCF*DKSSYRLHHQA Trigger: GGCCTGGTGGTGAAGTCTGTAGCTGCTCTTGTCCCAGAAACACCCTATTGGGTCTTTTAGATACACCGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | ATTTACTTCCCACAGCATGGTGTGGGAAAGGGAGGTTaGCAGATCAGACGGCTCACAGACCTATACCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: IYFPQHGVGKGG*QIRRLTDLYHK Trigger: TTTGTGGTATAGGTCTGTGAGCCGTCTGATCTGCCAACCTCCCTTTCCCACACCATGCTGTGGGAAGTAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CCA 72 bp | CCCCACGGTCACCATGTAGGTGTGGGCATTCAGCAGTaGGGAAAGTCTGGAATTCATGAGTGTTTTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PHGHHVGVGIQQ*GKSGIHECFSL Trigger: AAGAGAAAAACACTCATGAATTCCAGACTTTCCCCACTGCTGAATGCCCACACCTACATGGTGACCGTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR GCA 72 bp | CTGACCTCTCTGGAAAGGTCTAGATTGCCGGTACTTTaGTCTGGGAAAGGGCAAACATCTCTGTGTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTSLERSRLPVL*SGKGQTSLCSD Trigger: ATCTGAACACAGAGATGTTTGCCCTTTCCCAGAGCAAAGTACCGGCAATCTAGACCTTTCCAGAGAGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGATTTCAATTTAAACCGTGTCTTAGGCAATCACATGTAACTAGTGGGAGGTGTGGGAAAGGGAGGTaGGCAGATCAGACGGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGFQFKPCLRQSHVTSGRCGKGR*ADQTAH Trigger: GTGAGCCGTCTGATCTGCCAACCTCCCTTTCCCACA...CCTCCCACTAGTTACATGTGATTGCCTAAGACACGGTTTAAATTGAAATCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | TTCTCACGTTTCTCCATTTTCTCCCTCTCGATGGACTaGCATTTTGGCACAAGGGCAACTAAAGAACTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FSRFSIFSLSMD*HFGTRATKELP Trigger: TGGGAGTTCTTTAGTTGCCCTTGTGCCAAAATGTCAGTCCATCGAGAGGGAGAAAATGGAGAAACGTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | TGGTCATGGGAAGGAAGGGAAGGGTATCTATATACATaGATGAATGACATGGAATGGGACGACAGGGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: WSWEGREGYLYT*MNDMEWDDREI Trigger: TATCTCCCTGTCGTCCCATTCCATGTCATTCATTCATGTATATAGATACCCTTCCCTTCCTTCCCATGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR TCA 72 bp | ACACACTATGCTCATTTACTTCTCCCAGATACTCGATaGCGACATAGCTTAGGGTATAAACACTTATACAAA | + |
|
Preference number: 3 (lower is better) Translates to: THYAHLLLPDTR*RHSLGYKHLYK Trigger: TTTGTATAAGTGTTTATACCCTAAGCTATGTCGTCATCGAGTATCTGGGAGAAGTAAATGAGCATAGTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGCTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACGCCACGGCCCCAGCATaGTCAGGGCACTGGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPATSQLVPLPGSSYRPHATAPA*SGHWQA Trigger: GGCCTGCCAGTGCCCTGACCATGCTGGGGCCGTGGC...GTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAGCTGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR TCA 90 bp | GCACTGGCACCTCCCAGAGTATGTGTCAGGCTAGAGGTGTCCCTGTCCATGGGACTCCTGCAGCCCTCTTaGGCTGCAATGGACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALAPPRVCVRLEVSLSMGLLQPS*AAMDSH Trigger: GTGGCTGTCCATTGCAGCTCAAGAGGGCTGCAGGAG...TCCCATGGACAGGGACACCTCTAGCCTGACACATACTCTGGGAGGTGCCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGTGCAGAGTTGGGGGAGGAGAATATCTCATTCAAGGAGAGAAGGAAGGGGGAGGGGGCCAGTGTaGCTGAGGGGCTCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSVQSWGRRISHSRREGRGRGPV*LRGSAC Trigger: GCAGGCAGAGCCCCTCAGCCACACTGGCCCCCTCCC...CCTTCCTTCTCTCCTTGAATGAGATATTCTCCTCCCCCAACTCTGCACAGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR TCA 90 bp | TTAACTGGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATGCCCCCAGCCAGACCTaGGAAGGCTGCTGGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTGYWVLSMSVPMGARQHAPSQT*EGCWPN Trigger: ATTGGGCCAGCAGCCTTCTCAGGTCTGGCTGGGGGC...ATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCCAGTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGACTGACCCAGAGTCCTGGAGATCTAGAGGGTCTGTGCAGAGTTGGGGGAGGGCACACTCACAGTaGAGTGGATTGTGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRTDPESWRSRGSVQSWGRAHSQ*SGLWDR Trigger: CCTGTCCCACAATCCACTGCACTGTGAGTGTGCCCT...CCCCCAACTCTGCACAGACCCTCTAGATCTCCAGGACTCTGGGTCAGTCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR GCA 90 bp | GGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATCACAACCCCACAAACTGCTCCTaGGCTGAGGTGTGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GYWVLSMSVPMGARQHHNPTNCS*AEVWQA Trigger: TGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGG...GTTGTGATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATCACAACCCTGAGTCCAGGACCTaGATCAGCGGCTTGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GYWVLSMSVPMGARQHHNPESRT*ISGLPT Trigger: TGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGG...GTTGTGATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR TCA 90 bp | GCACTGGCACCTCCCAGAGTATGTGTCAGGCTAGAGGTGTCCCTGTCCATGGGAAAACTGCTCCTGCGCTaGGGTGTGGCAGGCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALAPPRVCVRLEVSLSMGKLLLR*GVAGNF Trigger: GAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTT...TCCCATGGACAGGGACACCTCTAGCCTGACACATACTCTGGGAGGTGCCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCTGAAGCCAGCCTTGGCAAGGAGTTCCGTTTCTCTCGACCTCCATTTATCCCACAGGGCCTCCTaGAGGGCACACTCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WQLKPALARSSVSLDLHLSHRAS*RAHSQC Trigger: GCACTGTGAGTGTGCCCTGCAGGAGGCCCTGTGGGA...TAAATGGAGGTCGAGAGAAACGGAACTCCTTGCCAAGGCTGGCTTCAGCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GCACTGGCACCTCCCAGAGTATGTGTCAGGCTAGAGGTGTCCCTGTCCATGGGAGCCTCAATGGCATTATaGGACAGGTCCAGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALAPPRVCVRLEVSLSMGASMAL*DRSSSL Trigger: GAGGGAGCTGGACCTGTCCCATAATGCCATTGAGGC...TCCCATGGACAGGGACACCTCTAGCCTGACACATACTCTGGGAGGTGCCAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GCACTGGCACCTCCCAGAGTATGTGTCAGGCTAGAGGTGTCCCTGTCCATGGGACTTCGGATGCGATTGTaGGATAAGTCCAGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALAPPRVCVRLEVSLSMGLRMRL*DKSSSR Trigger: GCGGCTGCTGGACTTATCCCACAATCGCATCCGAAG...TCCCATGGACAGGGACACCTCTAGCCTGACACATACTCTGGGAGGTGCCAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CAA 72 bp | AGCTTGGCCCAGGGCTGTGGAAGAATAGTGGACAGCTaGGGAGCTCATCCAGGGCTCTGTTCACCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLAQGCGRIVDS*GAHPGLCSPCR Trigger: TCTGCAGGGTGAACAGAGCCCTGGATGAGCTCCCAAGCTGTCCACTATTCTTCCACAGCCCTGGGCCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CAA 72 bp | TGTCTGTGCCAATGGGGGCCAGGCAGCATCACAACGTaGACTGGTGTCCCTAAGGAGGCTGCTTCGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLCQWGPGSITT*TGVPKEAASRF Trigger: GAACCTCGAAGCAGCCTCCTTAGGGACACCAGTCAACGTTGTGATGCTGCCTGGCCCCCATTGGCACAGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCTGAAGCCAGCCTTGGCAAGGAGTTCCGTTTCTCTCGACCTCCATTTAGCAGAAGCTGGCACCTaGGTCCAGGACCTGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: WQLKPALARSSVSLDLHLAEAGT*VQDLDQ Trigger: CTGATCCAGGTCCTGGACTCAGGTGCCAGCTTCTGC...TAAATGGAGGTCGAGAGAAACGGAACTCCTTGCCAAGGCTGGCTTCAGCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCTGAAGCCAGCCTTGGCAAGGAGTTCCGTTTCTCTCGACCTCCATTTAACCAGCCGAACATGGTaGCCAGCATGGCGACATCGG | + |
|
Preference number: 4 (lower is better) Translates to: WQLKPALARSSVSLDLHLTSRTW*PAWRHR Trigger: CCGATGTCGCCATGCTGGTCACCATGTTCGGCTGGT...TAAATGGAGGTCGAGAGAAACGGAACTCCTTGCCAAGGCTGGCTTCAGCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR GCA 90 bp | GTCCCTAAGGAGGCTGCTTCGAGGTTCCAATTCTCATGGGAATGGGAATGGTCCGGCTTGCCCACAAACTaGTCCTGCGCTGAGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPKEAASRFQFSWEWEWSGLPTN*SCAEVW Trigger: CCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCC...GGACCATTCCCATTCCCATGAGAATTGGAACCTCGAAGCAGCCTCCTTAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR GCA 90 bp | GTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAATCTTCCGGTGGGTACTaGAGAAGCTGGCACCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPLPGSSYRPHHMVIGMQSSGGY*RSWHLS Trigger: ACTCAGGTGCCAGCTTCTGCAGTACCCACCGGAAGA...TTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAGGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAAGCCATAACTCCAGGTGTCGTCTaGCATCCTCCTGGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSSYRPHHMVIGMQAITPGVV*HPPGCG Trigger: GCCACAACCAGGAGGATGCCAGACGACACCTGGAGT...TATGGCTTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GTCCCTAAGGAGGCTGCTTCGAGGTTCCAATTCTCATGGGAATGGGAATGGTCCAGGCTGCTGGCCCAATaGCCTCAATGGCATTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPKEAASRFQFSWEWEWSRLLAQ*PQWHYG Trigger: CCCATAATGCCATTGAGGCCATTGGGCCAGCAGCCT...GGACCATTCCCATTCCCATGAGAATTGGAACCTCGAAGCAGCCTCCTTAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GTCCCTAAGGAGGCTGCTTCGAGGTTCCAATTCTCATGGGAATGGGAATGGTCCCAGTGCAGTGGATTGTaGGACAGGCGGATCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPKEAASRFQFSWEWEWSQCSGL*DRRILA Trigger: TGCCAAGATCCGCCTGTCCCACAATCCACTGCACTG...GGACCATTCCCATTCCCATGAGAATTGGAACCTCGAAGCAGCCTCCTTAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR TCA 90 bp | TTAACTGGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATGTAAGCAGAAGAGGATaGAGAAGCAAGACCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTGYWVLSMSVPMGARQHVSRRG*RSKTPG Trigger: CCCAGGGGTCTTGCTTCTTCATCCTCTTCTGCTTAC...ATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCCAGTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATCACAACCTCGGGAGATTCTGTTaGCGTCTAGTTTCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GYWVLSMSVPMGARQHHNLGRFC*RLVSEA Trigger: TGCTTCTGAAACTAGACGCCAACAGAATCTCCCGAG...GTTGTGATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGAGTCTCCCATCTCCTCTTTCCAGCAAGGGCTGAGCAGGAGCTGTATAACACTCACAGTGCAGTaGATTGTGGGACAGGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPESPISSFQQGLSRSCITLTVQ*IVGQAD Trigger: ATCCGCCTGTCCCACAATCCACTGCACTGTGAGTGT...TATACAGCTCCTGCTCAGCCCTTGCTGGAAAGAGGAGATGGGAGACTCAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CAA 72 bp | TGCCTGGCTCAGCTCTGGCTTTTTAACCTCTTTTCCTaGGCACAGCACCCTCCAGGGTCCAAATCATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLAQLWLFNLFS*AQHPPGSKSYS Trigger: GCTGTATGATTTGGACCCTGGAGGGTGCTGTGCCAAGGAAAAGAGGTTAAAAAGCCAGAGCTGAGCCAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGAAAGGTCTAGATTGCCGGTACTTTGCTCTGGGAAAGGGCAAACATCTGCCCAATGGCCTCAATaGCATTATGGGACAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLERSRLPVLCSGKGQTSAQWPQ*HYGTGP Trigger: TGGACCTGTCCCATAATGCCATTGAGGCCATTGGGC...AGATGTTTGCCCTTTCCCAGAGCAAAGTACCGGCAATCTAGACCTTTCCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CAA 72 bp | TATTTACTTCCCACAGCATGGTGTGGGAAAGGGAGGTaGGCAGATCAGACGGCTCACAGACCTATACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: YLLPTAWCGKGR*ADQTAHRPIPQ Trigger: TTGTGGTATAGGTCTGTGAGCCGTCTGATCTGCCAACCTCCCTTTCCCACACCATGCTGTGGGAAGTAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| 3UTR CAA 72 bp | CTGGACTTTGCACTGACCTCTCTGGAAAGGTCTAGATaGCCGGTACTTTGCTCTGGGAAAGGGCAAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LDFALTSLERSR*PVLCSGKGQTS Trigger: AGATGTTTGCCCTTTCCCAGAGCAAAGTACCGGCAATCTAGACCTTTCCAGAGAGGTCAGTGCAAAGTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGAAAGTTGATCAGTGAGCTCTGGGATTTCAGCGAGGTGAAGAGAAGGTTCGCCCAGGGCGTCCTTTaGAATTCTTCGGATGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: VRKLISELWDFSEVKRRFAQGVL*NSSDAI Trigger: AATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGC...GAACCTTCTCTTCACCTCGCTGAAATCCCAGAGCTCACTGATCAACTTTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS TCA 90 bp | CACCGTGTCGGCTGGGATGTCCCTAGGGATCTCCTGCAGCCCTCTTaGGCTGCAATGGACAGCCACGGCCCCAGCATGGTCAGGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: HRVGWDVPRDLLQPS*AAMDSHGPSMVRAL Trigger: CAGTGCCCTGACCATGCTGGGGCCGTGGCTGTCCATTGCAGCTCAAGAGGGCTGCAGGAGATCCCTAGGGACATCCCAGCCGACACGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS TCA 90 bp | GGCGACATCGGTGGTCTTCCGGTGGGTACTGCAGAAGCTGGCACCTaGGTCCAGGACCTGGATCAGCGGCTTGCCCACAAACTGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDIGGLPVGTAEAGT*VQDLDQRLAHKLLL Trigger: CAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGGTGCCAGCTTCTGCAGTACCCACCGGAAGACCACCGATGTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS GCA 90 bp | CCTGAGTCCAGGACCTGGATCAGCGGCTTGCCCACAAACTGCTCCTaGGCTGAGGTGTGGCAGGCAATTTCATCCACGGAGTCCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PESRTWISGLPTNCS*AEVWQAISSTESGS Trigger: GGACCCGGACTCCGTGGATGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS CCA 90 bp | GTCTTCCGGTGGGTACTGCAGAAGCTGGCACCTGAGTCCAGGACCTaGATCAGCGGCTTGCCCACAAACTGCTCCTGCGCTGAGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFRWVLQKLAPESRT*ISGLPTNCSCAEVW Trigger: CCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGGTGCCAGCTTCTGCAGTACCCACCGGAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS TCA 90 bp | GTCCAGGACCTGGATCAGCGGCTTGCCCACAAACTGCTCCTGCGCTaGGGTGTGGCAGGCAATTTCATCCACGGAGTCCGGGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VQDLDQRLAHKLLLR*GVAGNFIHGVRVQL Trigger: AAGCTGGACCCGGACTCCGTGGATGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS GCA 90 bp | TCATCCACGGAGTCCGGGTCCAGCTTTAGTTCCCACAGGGCCTCCTaGAGGGCACACTCACAGTGCAGTGGATTGTGGGACAGGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SSTESGSSFSSHRAS*RAHSQCSGLWDRRI Trigger: GATCCGCCTGTCCCACAATCCACTGCACTGTGAGTGTGCCCTGCAGGAGGCCCTGTGGGAACTAAAGCTGGACCCGGACTCCGTGGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS GCA 90 bp | CTGGCACCTGAGTCCAGGACCTGGATCAGCGGCTTGCCCACAAACTaGTCCTGCGCTGAGGTGTGGCAGGCAATTTCATCCACGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAPESRTWISGLPTN*SCAEVWQAISSTES Trigger: GGACTCCGTGGATGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGGTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGCTACCTCCCAACTTGTGCCCCTGCCTGGAAGCAGCTACCGTCCCCACACTCGGGAGATTCTGTaGGCGTCTAGTTTCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPATSQLVPLPGSSYRPHTREIL*ASSFRS Trigger: GCTTCTGAAACTAGACGCCAACAGAATCTCCCGAGT...GTGGGGACGGTAGCTGCTTCCAGGCAGGGGCACAAGTTGGGAGGTAGCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CAA 90 bp | GCACTGGCACCTCCCAGAGTATGTGTCAGGCTAGAGGTGTCCCTGTCCATGGGACAGCTGAGGCAGGTGTaGGAAGGCTCCATTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALAPPRVCVRLEVSLSMGQLRQV*EGSIGD Trigger: GTCCCCAATGGAGCCTTCCAACACCTGCCTCAGCTG...TCCCATGGACAGGGACACCTCTAGCCTGACACATACTCTGGGAGGTGCCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS GCA 90 bp | TCTTGGCACTCAACTTGCCCAGGGCGTCCTTTGGAATTCTTCGGATaGGATTGTGGGATAAGTCCAGCAGCCGCAGGCCCCCAGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWHSTCPGRPLEFFG*DCGISPAAAGPQPD Trigger: GTCTGGCTGGGGGCCTGCGGCTGCTGGACTTATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS CCA 90 bp | CTCAACTTGCCCAGGGCGTCCTTTGGAATTCTTCGGATGCGATTGTaGGATAAGTCCAGCAGCCGCAGGCCCCCAGCCAGACCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNLPRASFGILRMRL*DKSSSRRPPARPEK Trigger: CTTCTCAGGTCTGGCTGGGGGCCTGCGGCTGCTGGACTTATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS CCA 90 bp | ACCTGGATCAGCGGCTTGCCCACAAACTGCTCCTGCGCTGAGGTGTaGCAGGCAATTTCATCCACGGAGTCCGGGTCCAGCTTTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TWISGLPTNCSCAEV*QAISSTESGSSFSS Trigger: GGAACTAAAGCTGGACCCGGACTCCGTGGATGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS GCA 90 bp | TACTGCAGAAGCTGGCACCTGAGTCCAGGACCTGGATCAGCGGCTTaGCCACAAACTGCTCCTGCGCTGAGGTGTGGCAGGCAATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YCRSWHLSPGPGSAA*PQTAPALRCGRQFH Trigger: ATGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGGTGCCAGCTTCTGCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS CCA 90 bp | GCAGGGCACACTCACAGTGCAGTGGATTGTGGGACAGGCGGATCTTaGCACTCAACTTGCCCAGGGCGTCCTTTGGAATTCTTCGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: AGHTHSAVDCGTGGS*HSTCPGRPLEFFGC Trigger: GCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACTGCACTGTGAGTGTGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAGCAGAGGCTCCAGCCTCATACACTTAGCCTGTGAGTTGGTCATGGGATCTCCTGCAGCCCTCTaGAGCTGCAATGGACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSSRGSSLIHLACELVMGSPAAL*SCNGQP Trigger: TGGCTGTCCATTGCAGCTCAAGAGGGCTGCAGGAGA...TCCCATGACCAACTCACAGGCTAAGTGTATGAGGCTGGAGCCTCTGCTGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGGAAGCAGCTACCGTCCCCACCACATGGTAATAGGAATGCAAGCCATATGGGACAGGCGGATCTaGGCACTCAACTTGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGSSYRPHHMVIGMQAIWDRRI*ALNLPR Trigger: CCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCA...TATGGCTTGCATTCCTATTACCATGTGGTGGGGACGGTAGCTGCTTCCAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CAA 90 bp | GTCCCTAAGGAGGCTGCTTCGAGGTTCCAATTCTCATGGGAATGGGAATGGTCCACCTGGATCAGCGGCTaGCCCACAAACTGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPKEAASRFQFSWEWEWSTWISG*PTNCSC Trigger: GCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGT...GGACCATTCCCATTCCCATGAGAATTGGAACCTCGAAGCAGCCTCCTTAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS GCA 90 bp | CACAGTGCAGTGGATTGTGGGACAGGCGGATCTTGGCACTCAACTTaGCCAGGGCGTCCTTTGGAATTCTTCGGATGCGATTGTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: HSAVDCGTGGSWHST*PGRPLEFFGCDCGI Trigger: TATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACTGCACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CAA 90 bp | GTCCCTAAGGAGGCTGCTTCGAGGTTCCAATTCTCATGGGAATGGGAATGGTCCATCTTGGCACTCAACTaGCCCAGGGCGTCCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPKEAASRFQFSWEWEWSILALN*PRASFG Trigger: TCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGAT...GGACCATTCCCATTCCCATGAGAATTGGAACCTCGAAGCAGCCTCCTTAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CAA 90 bp | TTAACTGGGTACTGGGTATTGAGCATGTCTGTGCCAATGGGGGCCAGGCAGCATTCACAGTGCAGTGGATaGTGGGACAGGCGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTGYWVLSMSVPMGARQHSQCSG*WDRRIL Trigger: CAAGATCCGCCTGTCCCACAATCCACTGCACTGTGA...ATGCTGCCTGGCCCCCATTGGCACAGACATGCTCAATACCCAGTACCCAGTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGAAAGGTCTAGATTGCCGGTACTTTGCTCTGGGAAAGGGCAAACATCTTGCCCAGGGCGTCCTTaGGAATTCTTCGGATGCGAT | + |
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Preference number: 5 (lower is better) Translates to: SLERSRLPVLCSGKGQTSCPGRP*EFFGCD Trigger: ATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCA...AGATGTTTGCCCTTTCCCAGAGCAAAGTACCGGCAATCTAGACCTTTCCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS TCA 72 bp | GGCTGGGATGTCCCTAGGGATCTCCTGCAGCCCTCTTaGGCTGCAATGGACAGCCACGGCCCCAGCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: GWDVPRDLLQPS*AAMDSHGPSMV Trigger: GACCATGCTGGGGCCGTGGCTGTCCATTGCAGCTCAAGAGGGCTGCAGGAGATCCCTAGGGACATCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS GCA 72 bp | AGCTGGCACCTGAGTCCAGGACCTGGATCAGCGGCTTaGCCACAAACTGCTCCTGCGCTGAGGTGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SWHLSPGPGSAA*PQTAPALRCGR Trigger: CCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGGTGCCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CCA 72 bp | TCCCTAGGGATCTCCTGCAGCCCTCTTGAGCTGCAATaGACAGCCACGGCCCCAGCATGGTCAGGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SLGISCSPLELQ*TATAPAWSGHW Trigger: CCAGTGCCCTGACCATGCTGGGGCCGTGGCTGTCCATTGCAGCTCAAGAGGGCTGCAGGAGATCCCTAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CCA 72 bp | GGCCCCCAGCCAGACCTGAGAAGGCTGCTGGCCCAATaGCCTCAATGGCATTATGGGACAGGTCCAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GPQPDLRRLLAQ*PQWHYGTGPAP Trigger: GGGAGCTGGACCTGTCCCATAATGCCATTGAGGCCATTGGGCCAGCAGCCTTCTCAGGTCTGGCTGGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS TCA 72 bp | GGTGGTCTTCCGGTGGGTACTGCAGAAGCTGGCACCTaGGTCCAGGACCTGGATCAGCGGCTTGCCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: GGLPVGTAEAGT*VQDLDQRLAHK Trigger: TTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGGTGCCAGCTTCTGCAGTACCCACCGGAAGACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS GCA 72 bp | GAGTCCGGGTCCAGCTTTAGTTCCCACAGGGCCTCCTaGAGGGCACACTCACAGTGCAGTGGATTGTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ESGSSFSSHRAS*RAHSQCSGLWD Trigger: GTCCCACAATCCACTGCACTGTGAGTGTGCCCTGCAGGAGGCCCTGTGGGAACTAAAGCTGGACCCGGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS GCA 72 bp | CCAGCATGGCGACATCGGTGGTCTTCCGGTGGGTACTaGAGAAGCTGGCACCTGAGTCCAGGACCTGGATCA | + |
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Preference number: 6 (lower is better) Translates to: PAWRHRWSSGGY*RSWHLSPGPGS Trigger: TGATCCAGGTCCTGGACTCAGGTGCCAGCTTCTGCAGTACCCACCGGAAGACCACCGATGTCGCCATGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CCA 72 bp | GCCTCCTGCAGGGCACACTCACAGTGCAGTGGATTGTaGGACAGGCGGATCTTGGCACTCAACTTGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASCRAHSQCSGL*DRRILALNLPR Trigger: CCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACTGCACTGTGAGTGTGCCCTGCAGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CCA 72 bp | TGGGTACTGCAGAAGCTGGCACCTGAGTCCAGGACCTaGATCAGCGGCTTGCCCACAAACTGCTCCTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: WVLQKLAPESRT*ISGLPTNCSCA Trigger: AGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGGTGCCAGCTTCTGCAGTACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 72 bp | TTGCCCAGGGCGTCCTTTGGAATTCTTCGGATGCGATaGTGGGATAAGTCCAGCAGCCGCAGGCCCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LPRASFGILRMR*WDKSSSRRPPA Trigger: GGCTGGGGGCCTGCGGCTGCTGGACTTATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 72 bp | AGGGCCTCCTGCAGGGCACACTCACAGTGCAGTGGATaGTGGGACAGGCGGATCTTGGCACTCAACTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RASCRAHSQCSG*WDRRILALNLP Trigger: GGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACTGCACTGTGAGTGTGCCCTGCAGGAGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 90 bp | GCACTCAACTTGCCCAGGGCGTCCTTTGGAATTCTTCGGATGCGATaGTGGGATAAGTCCAGCAGCCGCAGGCCCCCAGCCAGACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ALNLPRASFGILRMR*WDKSSSRRPPARPE Trigger: CTCAGGTCTGGCTGGGGGCCTGCGGCTGCTGGACTTATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS GCA 72 bp | AGGACCTGGATCAGCGGCTTGCCCACAAACTGCTCCTaGGCTGAGGTGTGGCAGGCAATTTCATCCACGGAG | + |
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Preference number: 6 (lower is better) Translates to: RTWISGLPTNCS*AEVWQAISSTE Trigger: CTCCGTGGATGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS GCA 72 bp | GAGTCCAGGACCTGGATCAGCGGCTTGCCCACAAACTaGTCCTGCGCTGAGGTGTGGCAGGCAATTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ESRTWISGLPTN*SCAEVWQAISS Trigger: GGATGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CCA 72 bp | CCAGACCTGAGAAGGCTGCTGGCCCAATGGCCTCAATaGCATTATGGGACAGGTCCAGCTCCCTCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: PDLRRLLAQWPQ*HYGTGPAPSAE Trigger: CTCAGCTGAGGGAGCTGGACCTGTCCCATAATGCCATTGAGGCCATTGGGCCAGCAGCCTTCTCAGGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CCA 72 bp | CCACAGGGCCTCCTGCAGGGCACACTCACAGTGCAGTaGATTGTGGGACAGGCGGATCTTGGCACTCAACTT | + |
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Preference number: 6 (lower is better) Translates to: PQGLLQGTLTVQ*IVGQADLGTQL Trigger: AAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACTGCACTGTGAGTGTGCCCTGCAGGAGGCCCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 90 bp | GTACTGCAGAAGCTGGCACCTGAGTCCAGGACCTGGATCAGCGGCTaGCCCACAAACTGCTCCTGCGCTGAGGTGTGGCAGGCAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: VLQKLAPESRTWISG*PTNCSCAEVWQAIS Trigger: TGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAGCCGCTGATCCAGGTCCTGGACTCAGGTGCCAGCTTCTGCAGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS GCA 72 bp | TCAACTTGCCCAGGGCGTCCTTTGGAATTCTTCGGATaGGATTGTGGGATAAGTCCAGCAGCCGCAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: STCPGRPLEFFG*DCGISPAAAGP Trigger: GGGGCCTGCGGCTGCTGGACTTATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 90 bp | TGTGGGACAGGCGGATCTTGGCACTCAACTTGCCCAGGGCGTCCTTaGGAATTCTTCGGATGCGATTGTGGGATAAGTCCAGCAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: CGTGGSWHSTCPGRP*EFFGCDCGISPAAA Trigger: TGCGGCTGCTGGACTTATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 90 bp | TGCAGGGCACACTCACAGTGCAGTGGATTGTGGGACAGGCGGATCTaGGCACTCAACTTGCCCAGGGCGTCCTTTGGAATTCTTCGGATG | + |
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Preference number: 6 (lower is better) Translates to: CRAHSQCSGLWDRRI*ALNLPRASFGILRM Trigger: CATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACTGCACTGTGAGTGTGCCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CCA 72 bp | GTTGGAAGGCTCCATTGGGGACTCGGGAGATTCTGTTaGCGTCTAGTTTCAGAAGCACCGTGTCGGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: VGRLHWGLGRFC*RLVSEAPCRLG Trigger: TCCCAGCCGACACGGTGCTTCTGAAACTAGACGCCAACAGAATCTCCCGAGTCCCCAATGGAGCCTTCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CCA 72 bp | GCTCCCTCAGCTGAGGCAGGTGTTGGAAGGCTCCATTaGGGACTCGGGAGATTCTGTTGGCGTCTAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: APSAEAGVGRLH*GLGRFCWRLVS Trigger: TGAAACTAGACGCCAACAGAATCTCCCGAGTCCCCAATGGAGCCTTCCAACACCTGCCTCAGCTGAGGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 72 bp | TGTTGGAAGGCTCCATTGGGGACTCGGGAGATTCTGTaGGCGTCTAGTTTCAGAAGCACCGTGTCGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CWKAPLGTREIL*ASSFRSTVSAG Trigger: CCCAGCCGACACGGTGCTTCTGAAACTAGACGCCAACAGAATCTCCCGAGTCCCCAATGGAGCCTTCCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 72 bp | AGTGGATTGTGGGACAGGCGGATCTTGGCACTCAACTaGCCCAGGGCGTCCTTTGGAATTCTTCGGATGCGA | + |
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Preference number: 6 (lower is better) Translates to: SGLWDRRILALN*PRASFGILRMR Trigger: TCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 72 bp | CACTCACAGTGCAGTGGATTGTGGGACAGGCGGATCTaGGCACTCAACTTGCCCAGGGCGTCCTTTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: HSQCSGLWDRRI*ALNLPRASFGI Trigger: AATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACTGCACTGTGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 90 bp | TCACAGTGCAGTGGATTGTGGGACAGGCGGATCTTGGCACTCAACTaGCCCAGGGCGTCCTTTGGAATTCTTCGGATGCGATTGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SQCSGLWDRRILALN*PRASFGILRMRLWD Trigger: ATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGATCCGCCTGTCCCACAATCCACTGCACTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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| CDS CAA 72 bp | GGCGGATCTTGGCACTCAACTTGCCCAGGGCGTCCTTaGGAATTCTTCGGATGCGATTGTGGGATAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GGSWHSTCPGRP*EFFGCDCGISP Trigger: TGGACTTATCCCACAATCGCATCCGAAGAATTCCAAAGGACGCCCTGGGCAAGTTGAGTGCCAAGATCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057608.5 |
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