Pregenerated sensors for LRRC28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030556Ensembl transcript IDs: ENSMUST00000032775.12, ENSMUST00000053950.10, ENSMUST00000187953.8, ENSMUST00000189836.2, ENSMUST00000190276.7, ENSMUST00000191035.8
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGGCCCTCCTCAGGACAGGGCAGGCAGGATGGAAGGGTCTGTCCTaGCTGGCTGGACTCTCCTGGCCTGGCCGCACACACTGGCGATGG | + |
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Preference number: 1 (lower is better) Translates to: TALLRTGQAGWKGLS*LAGLSWPGRTHWRW Trigger: CCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCAGGACAGACCCTTCCATCCTGCCTGCCCTGTCCTGAGGAGGGCCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR GCA 90 bp | CAGCTGTGCCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTaGCCTGCTATGCTGGCTGCTGAGGCCATAGGCGTTGCAGAGACT | + |
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Preference number: 1 (lower is better) Translates to: QLCLCRSLAAPARAP*PAMLAAEAIGVAET Trigger: AGTCTCTGCAACGCCTATGGCCTCAGCAGCCAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGGCACAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR CCA 90 bp | TCCTGCCTGGCTGGACTCTCCTGGCCTGGCCGCACACACTGGCGATaGAAGGCAGTCGCAGTGGCTGAGCTGGCAGTGCTCCTAAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SCLAGLSWPGRTHWR*KAVAVAELAVLLRL Trigger: GAGCCTTAGGAGCACTGCCAGCTCAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCAGGA 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR CCA 90 bp | GGTCTGTCCTGCCTGGCTGGACTCTCCTGGCCTGGCCGCACACACTaGCGATGGAAGGCAGTCGCAGTGGCTGAGCTGGCAGTGCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: GLSCLAGLSWPGRTH*RWKAVAVAELAVLL Trigger: TAGGAGCACTGCCAGCTCAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCAGGACAGACC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR CCA 90 bp | CCTCAGGACAGGGCAGGCAGGATGGAAGGGTCTGTCCTGCCTGGCTaGACTCTCCTGGCCTGGCCGCACACACTGGCGATGGAAGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: PQDRAGRMEGSVLPG*TLLAWPHTLAMEGS Trigger: ACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCAGGACAGACCCTTCCATCCTGCCTGCCCTGTCCTGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR GCA 90 bp | ATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTGTaGCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: IRQEVSRGRVLWSQL*LCRSLAAPARAPCP Trigger: AGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGGCACAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR TCA 90 bp | CTGGCCTGGCCGCACACACTGGCGATGGAAGGCAGTCGCAGTGGCTaGGCTGGCAGTGCTCCTAAGGCTCTCGAGTGTTTATCAACACAG | + |
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Preference number: 1 (lower is better) Translates to: LAWPHTLAMEGSRSG*AGSAPKALECLSTQ Trigger: CTGTGTTGATAAACACTCGAGAGCCTTAGGAGCACTGCCAGCTCAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR CCA 90 bp | GCAAGATGGTTTCCAGCCATGGAGAGCTCATTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACACAGCATAGCCGATTGCGGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: ARWFPAMESSLRLGS*QRWRGTQHSRLRST Trigger: TGTGGACCGCAATCGGCTATGCTGTGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCATCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR TCA 90 bp | CAATGGGCAAAGATGCAAGATGGTTTCCAGCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGAGATGGCGCGGCACACAGCATAGCC | + |
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Preference number: 1 (lower is better) Translates to: QWAKMQDGFQPWRAH*GWAAGRDGAAHSIA Trigger: GGCTATGCTGTGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCATCTTGCATCTTTGCCCATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR GCA 90 bp | TCCGCATGGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTaGCTATTGTCTTCACCTCTGCTGGGAGGAAGACTGTCAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: SAWSVLAEAGHDPSL*LLSSPLLGGRLSAA Trigger: GGCAGCTGACAGTCTTCCTCCCAGCAGAGGTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR GCA 90 bp | GCAGTAAGCCACGAAGCCAATACTTGTCCTCCTCTGGTGCAGGCCTaGCATCGGCGTCTCTCTCAAGGGGAAGATCTTAGGATAGACGAA | + |
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Preference number: 1 (lower is better) Translates to: AVSHEANTCPPLVQA*HRRLSQGEDLRIDE Trigger: TTCGTCTATCCTAAGATCTTCCCCTTGAGAGAGACGCCGATGGCAGGCCTGCACCAGAGGAGGACAAGTATTGGCTTCGTGGCTTACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR TCA 90 bp | GGGGATGCCACAGCCGTTGCAGCCGATGACTTTGTTGTAGAGGTATaGGGGCAGGCCCTTCAGCTGGATGTTGTTATCCACATACACGTA | + |
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Preference number: 1 (lower is better) Translates to: GDATAVAADDFVVEV*GQALQLDVVIHIHV Trigger: TACGTGTATGTGGATAACAACATCCAGCTGAAGGGCCTGCCCTCATACCTCTACAACAAAGTCATCGGCTGCAACGGCTGTGGCATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR TCA 90 bp | TCAGACCACCGATTTCTGGGCAAACGATCTCTAAGGCATTGTCACTaGGATCCAGACACTGGAGTTTCACGAGGGACCCGATGGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SDHRFLGKRSLRHCH*DPDTGVSRGTRWLL Trigger: CAGAAGCCATCGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGTTTGCCCAGAAATCGGTGGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR GCA 90 bp | GAGGGCAGGCCCTTCAGCTGGATGTTGTTATCCACATACACGTACTaGAGTTCTCGGGAGCGACCTAAATCAATGGGCAAAGATGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: EGRPFSWMLLSTYTY*SSRERPKSMGKDAR Trigger: TCTTGCATCTTTGCCCATTGATTTAGGTCGCTCCCGAGAACTGCAGTACGTGTATGTGGATAACAACATCCAGCTGAAGGGCCTGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR CCA 90 bp | TCTGGGCAAACGATCTCTAAGGCATTGTCACTGAGATCCAGACACTaGAGTTTCACGAGGGACCCGATGGCTTCTGGAACCACAACTATG | + |
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Preference number: 1 (lower is better) Translates to: SGQTISKALSLRSRH*SFTRDPMASGTTTM Trigger: CATAGTTGTGGTTCCAGAAGCCATCGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGTTTGCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR GCA 90 bp | AGATTGGAGACAAAAAGTTCAGATCTTTCCAAAGCCCGTGGTAGGTaGGGTAGAGACTCCGCATGGTCAGTTCTTGCAGAGGCAGGACAT | + |
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Preference number: 1 (lower is better) Translates to: RLETKSSDLSKARGR*GRDSAWSVLAEAGH Trigger: ATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGTCTCTACCGCACCTACCACGGGCTTTGGAAAGATCTGAACTTTTTGTCTCCAATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR TCA 90 bp | GGTACTGGAGGTAGGAACTGTAGCTGGTTATTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCACCGATTTCTGGGCAAACGATCTCT | + |
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Preference number: 1 (lower is better) Translates to: GTGGRNCSWLLANRR*RNALRPPISGQTIS Trigger: AGAGATCGTTTGCCCAGAAATCGGTGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAATAACCAGCTACAGTTCCTACCTCCAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR GCA 90 bp | CAGCCAACAGTGATCATGCCTCCAGGGAAACTGCTTCCCCACACTTaGAGAACTACCAACAGGCTGCAGATTATTAATATATCTGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: QPTVIMPPGKLLPHT*RTTNRLQIINISAR Trigger: CCTTGCAGATATATTAATAATCTGCAGCCTGTTGGTAGTTCTGCAAGTGTGGGGAAGCAGTTTCCCTGGAGGCATGATCACTGTTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| 3UTR TCA 90 bp | GCCACATTTTCCTGCCTTCAGCTTATATACATGTCGGGGTTGTGCTaGAACTTCCATTCTTCCGAAAGGATGAAAGAAGAGATACACTTG | + |
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Preference number: 1 (lower is better) Translates to: ATFSCLQLIYMSGLC*NFHSSERMKEEIHL Trigger: CAAGTGTATCTCTTCTTTCATCCTTTCGGAAGAATGGAAGTTTCAGCACAACCCCGACATGTATATAAGCTGAAGGCAGGAAAATGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR CCA 90 bp | GGATGTGAACTTTTGTTTGCATCGCTTTTTCTCCTTCCTGTGAATTaGCACAGCATTGGCTTCCTTAAGGCTAACTACCTCTTAGAATTA | + |
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Preference number: 1 (lower is better) Translates to: GCELLFASLFLLPVN*HSIGFLKANYLLEL Trigger: TAATTCTAAGAGGTAGTTAGCCTTAAGGAAGCCAATGCTGTGCCAATTCACAGGAAGGAGAAAAAGCGATGCAAACAAAAGTTCACATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTGCCCTGCTATGCTGTCTGTCCTGCCTGGCTaGACTCTCCTGGCCTGGCCG | + |
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Preference number: 2 (lower is better) Translates to: CLCRSLAAPARAPCPAMLSVLPG*TLLAWP Trigger: CGGCCAGGCCAGGAGAGTCCAGCCAGGCAGGACAGA...CAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTGCCCTGCTATGCTGGCACAATTGGATGGGGATaGCACAGCCGTTGCAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: PLQEPSCSSPGTLPCYAGTIGWG*HSRCSR Trigger: TCGGCTGCAACGGCTGTGGCATCCCCATCCAATTGT...GCCAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR-3UTR CCA 90 bp | GACACTGGGTGGAGCAGCAGTAAGCCACGAAGCCAATACTTGTCCTCCTCTGGTAGAGGGCGTGTGCTCTaGAGCCAGCTGTGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: DTGWSSSKPRSQYLSSSGRGRVL*SQLCLC Trigger: GCAGAGGCACAGCTGGCTCCAGAGCACACGCCCTCT...ACCAGAGGAGGACAAGTATTGGCTTCGTGGCTTACTGCTGCTCCACCCAGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCCCTGCTATGCTGGCTGCTGAGGCCATAGGCGTTGCAGAGACTCTAGAACTCACCTCTGACAATTaGATGGGGATGCCACAGCCG | + |
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Preference number: 2 (lower is better) Translates to: PCPAMLAAEAIGVAETLELTSDN*MGMPQP Trigger: CGGCTGTGGCATCCCCATCCAATTGTCAGAGGTGAG...TTCTAGAGTCTCTGCAACGCCTATGGCCTCAGCAGCCAGCATAGCAGGGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGCAGGACATGATCCTTCTCTGTGCCTATTGTCTTCACCTCTGCTGGGAGTGGAAGGGTCTGTCCTaGCTGGCTGGACTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QRQDMILLCAYCLHLCWEWKGLS*LAGLSW Trigger: CCAGGAGAGTCCAGCCAGGCAGGACAGACCCTTCCA...CTCCCAGCAGAGGTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR-3UTR TCA 90 bp | ATAATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTGGCAGTCGCAGTGGCTaGGCTGGCAGTGCTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: IISRGNHPLGEGRIITKRGSRSG*AGSAPK Trigger: CTTAGGAGCACTGCCAGCTCAGCCACTGCGACTGCC...ACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGGAAAGCTCATGGGATTTTTGCAAAGGTGGGATGTGGACCCGTTCATTCGGCAGTCGCAGTGGCTaGGCTGGCAGTGCTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: ARESSWDFCKGGMWTRSFGSRSG*AGSAPK Trigger: CTTAGGAGCACTGCCAGCTCAGCCACTGCGACTGCC...GAATGAACGGGTCCACATCCCACCTTTGCAAAAATCCCATGAGCTTTCCCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR-3UTR TCA 90 bp | TGCGGTAGAGACTCCGCATGGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCAGCAGCCTCACCTCTaGCAATTGGATGGGGATGCC | + |
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Preference number: 2 (lower is better) Translates to: CGRDSAWSVLAEAGHDPSQQPHL*QLDGDA Trigger: GGCATCCCCATCCAATTGTCAGAGGTGAGGCTGCTG...AGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGTCTCTACCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGCTCCTAAGAATAATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGACAGGGCAGGCAGGATaGAAGGGTCTGTCCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: EKLLRIISRGNHPLGEGRTGQAG*KGLSCL Trigger: CAGGCAGGACAGACCCTTCCATCCTGCCTGCCCTGT...CCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATTATTCTTAGGAGCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGGAAAGCTCATGGGATTTTTGCAAAGGTGGGATGTGGACCCGTTCATTCGGCAGCTGGCAGAGATaGCGCGGCACACAGCATAGC | + |
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Preference number: 2 (lower is better) Translates to: ARESSWDFCKGGMWTRSFGSWQR*RGTQHS Trigger: GCTATGCTGTGTGCCGCGCCATCTCTGCCAGCTGCC...GAATGAACGGGTCCACATCCCACCTTTGCAAAAATCCCATGAGCTTTCCCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR CAA 90 bp | TGGCTGGTGTTTCATACGCTGCATTGGTCTGAGAGAGACGGGCCTTaGGCATTGCTTTGGGCAGGTAGTGGGAGAAGAAAGGCATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: WLVFHTLHWSERDGP*ALLWAGSGRRKACW Trigger: CCAGCATGCCTTTCTTCTCCCACTACCTGCCCAAAGCAATGCCAAAGGCCCGTCTCTCTCAGACCAATGCAGCGTATGAAACACCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| 3UTR CAA 90 bp | CCAAAGCCCGTGGTAGGTGCGGTAGAGACTCCGCATGGTCAGTTCTaGCAGAGGCAGGACATGATCCTTCTCTGTGCCTATTGTCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PKPVVGAVETPHGQF*QRQDMILLCAYCLH Trigger: GTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGTCTCTACCGCACCTACCACGGGCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGGAAAGCTCATGGGATTTTTGCAAAGGTGGGATGTGGACCCGTTCATTCCTCTGGAGCCAGCTGTaGCTCTGCAGGAGCCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: ARESSWDFCKGGMWTRSFLWSQL*LCRSLA Trigger: AGCTAGGCTCCTGCAGAGGCACAGCTGGCTCCAGAG...GAATGAACGGGTCCACATCCCACCTTTGCAAAAATCCCATGAGCTTTCCCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR CAA 90 bp | TGGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTGCCTATaGTCTTCACCTCTGCTGGGAGGAAGACTGTCAGCTGCCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: WSVLAEAGHDPSLCL*SSPLLGGRLSAAQM Trigger: CATCTGGGCAGCTGACAGTCTTCCTCCCAGCAGAGGTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGATTGGAGACAAAAAGTTCAGATCTTTCCAAAGCCCGTGGTAGGTGCGGTAGGGTCTGTCCTGCCTaGCTGGACTCTCCTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: MRLETKSSDLSKARGRCGRVCPA*LDSPGL Trigger: CAGGCCAGGAGAGTCCAGCCAGGCAGGACAGACCCT...ACCGCACCTACCACGGGCTTTGGAAAGATCTGAACTTTTTGTCTCCAATCTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR-3UTR CCA 90 bp | AAACACAGATGCAGCCCTGTGTTTCCCTGTCGTTCAATTAAGTCAAGCACGGATTTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACA | + |
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Preference number: 2 (lower is better) Translates to: KHRCSPVFPCRSIKSSTDLRLGS*QRWRGT Trigger: TGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAA...ATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCTGCATCTGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR CAA 90 bp | AACGCTCTCAGACCACCGATTTCTGGGCAAACGATCTCTAAGGCATaGTCACTGAGATCCAGACACTGGAGTTTCACGAGGGACCCGATG | + |
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Preference number: 2 (lower is better) Translates to: NALRPPISGQTISKA*SLRSRHWSFTRDPM Trigger: CATCGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGTTTGCCCAGAAATCGGTGGTCTGAGAGCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR-3UTR GCA 90 bp | AGGATGTATTCCGACTTGAGGGAAAAGCGAAGGCCTTTTAGTTGTGAAGCCCAATGGAAGGGTCTGTCCTaGCTGGCTGGACTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RMYSDLREKRRPFSCEAQWKGLS*LAGLSW Trigger: CCAGGAGAGTCCAGCCAGGCAGGACAGACCCTTCCA...TTGGGCTTCACAACTAAAAGGCCTTCGCTTTTCCCTCAAGTCGGAATACATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGCTCCTAAGAATAATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGGGGGAAATCATCCTCTaGGGGAAGGCAGGATCATCA | + |
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Preference number: 2 (lower is better) Translates to: EKLLRIISRGNHPLGEGRGEIIL*GKAGSS Trigger: TGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCC...CCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATTATTCTTAGGAGCTTCTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
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| 3UTR-3UTR CCA 90 bp | AATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATCTGAGATCCAGACACTaGAGTTTCACGAGGGACCCG | + |
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Preference number: 2 (lower is better) Translates to: NLQGKSSSGGRQDHHQTYLRSRH*SFTRDP Trigger: CGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAG...ATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGACAACACGTCCTTCATTTGGGGGAGGATGTATTCCGACTTGAGGGAAAAGTCCGCAGACACTGGGTaGAGCAGCAGTAAGCCACGA | + |
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Preference number: 2 (lower is better) Translates to: EDNTSFIWGRMYSDLREKSADTG*SSSKPR Trigger: TCGTGGCTTACTGCTGCTCCACCCAGTGTCTGCGGA...CTTTTCCCTCAAGTCGGAATACATCCTCCCCCAAATGAAGGACGTGTTGTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCCCAGATGAAAATGTCAGCAGCCTCACCTCTGACAATTGGATGGGGATGGGCAAAGATGCAAGATaGTTTCCAGCCATGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SCPDENVSSLTSDNWMGMGKDAR*FPAMES Trigger: GCTCTCCATGGCTGGAAACCATCTTGCATCTTTGCC...CATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATTTTCATCTGGGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTCAGCCAACAGTGATCATGCCTCCAGGGAAACTGCTTCCCCACACTTGCAGAAGGTTAGGGATGGCTaGTGTTTCATACGCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: ISANSDHASRETASPHLQKVRDG*CFIRCI Trigger: AATGCAGCGTATGAAACACCAGCCATCCCTAACCTT...CTGCAAGTGTGGGGAAGCAGTTTCCCTGGAGGCATGATCACTGTTGGCTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| 3UTR-3UTR GCA 90 bp | GGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTGCCTATTGTCTTCACAGGAAGACTGTCAGCTaGCCAGATGAAAATGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GQFLQRQDMILLCAYCLHRKTVS*PDENVS Trigger: GCTGACATTTTCATCTGGGCAGCTGACAGTCTTCCT...GTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
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| 3UTR-3UTR GCA 90 bp | GCATGGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTGCCTATTGTCTAGGAAGACTGTCAGCTaGCCAGATGAAAATGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: AWSVLAEAGHDPSLCLLSRKTVS*PDENVS Trigger: GCTGACATTTTCATCTGGGCAGCTGACAGTCTTCCT...AGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTCTTGATTCCCCTTTCAGTCTTGTCTTACATAAATCATACCAGTAAACAGAGGGTCTGTCCTGCCTaGCTGGACTCTCCTGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: AFLIPLSVLSYINHTSKQRVCPA*LDSPGL Trigger: CAGGCCAGGAGAGTCCAGCCAGGCAGGACAGACCCT...CTGTTTACTGGTATGATTTATGTAAGACAAGACTGAAAGGGGAATCAAGAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGCCCTGTGTTTCCCTGTCGTTCAATTAAGTCAAGCACGGATGTGAAGTGTGGCAGGCCCTTCAGCTaGATGTTGTTATCCACATAC | + |
|
Preference number: 2 (lower is better) Translates to: CSPVFPCRSIKSSTDVKCGRPFS*MLLSTY Trigger: GTATGTGGATAACAACATCCAGCTGAAGGGCCTGCC...ACACTTCACATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR-3UTR TCA 90 bp | TCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATCCAACAGTTACCAAGCAAGCCTTCTTaGTTCCCCTTTCAGTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SSSGGRQDHHQTYVIQQLPSKPS*FPFQSC Trigger: ACAAGACTGAAAGGGGAATCAAGAAGGCTTGCTTGG...TAACTGTTGGATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACACAGATGCAGCCCTGTGTTTCCCTGTCGTTCAATTAAGTCAAGCACGGATGAACAGAGCAAGTTGTaGAAGGGACGGGAGGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KHRCSPVFPCRSIKSSTDEQSKL*KGREEV Trigger: TACTTCCTCCCGTCCCTTTCACAACTTGCTCTGTTC...ATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCTGCATCTGTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGTCAGGCCACATTTTCCTGCCTTCAGCTTATATACATGTCGGGGTTGTGCTTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: KCQATFSCLQLIYMSGLCLANRR*RNALRP Trigger: TGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAA...GCACAACCCCGACATGTATATAAGCTGAAGGCAGGAAAATGTGGCCTGACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTGCCTATTGTCTTCACATCAATGGGCAAAGATaGAAGATGGTTTCCAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GQFLQRQDMILLCAYCLHINGQR*KMVSSH Trigger: ATGGCTGGAAACCATCTTGCATCTTTGCCCATTGAT...GTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACACAGATGCAGCCCTGTGTTTCCCTGTCGTTCAATTAAGTCAAGCACGGATTTTTCAGGCAGCAGGTaGTGTGACTGCAAAGAGATC | + |
|
Preference number: 2 (lower is better) Translates to: KHRCSPVFPCRSIKSSTDFSGSR*CDCKEI Trigger: GATCTCTTTGCAGTCACACCACCTGCTGCCTGAAAA...ATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCTGCATCTGTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGGGAAAGCTCATGGGATTTTTGCAAAGGTGGGATGTGGACCCGTTCATTCAGCGACCTAAATCAATaGGCAAAGATGCAAGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: ARESSWDFCKGGMWTRSFSDLNQ*AKMQDG Trigger: ACCATCTTGCATCTTTGCCCATTGATTTAGGTCGCT...GAATGAACGGGTCCACATCCCACCTTTGCAAAAATCCCATGAGCTTTCCCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCTTAGGATAGACGAAGGTAAACATGGGCTCACTACACAGGTGACAGTGCCCAGCGACCTAAATCAATaGGCAAAGATGCAAGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: DLRIDEGKHGLTTQVTVPSDLNQ*AKMQDG Trigger: ACCATCTTGCATCTTTGCCCATTGATTTAGGTCGCT...GGGCACTGTCACCTGTGTAGTGAGCCCATGTTTACCTTCGTCTATCCTAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGAAATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTGTGGTGGGGAAGCTCATTTaGCTAAGTTTATATATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRNKTGSFQRACALEPAVVGKLI*LSLYMR Trigger: TCTCATATATAAACTTAGTCAAATGAGCTTCCCCAC...CACAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAACTGACACTTTAGTCAGGGTATTTACACAGAATGGAGATTGTGCAAGGTTTCTGAGTAGACAGTGCTaGCTCCCTGGTGGATACGGT | + |
|
Preference number: 2 (lower is better) Translates to: TTDTLVRVFTQNGDCARFLSRQC*LPGGYG Trigger: ACCGTATCCACCAGGGAGGCAGCACTGTCTACTCAG...AAACCTTGCACAATCTCCATTCTGTGTAAATACCCTGACTAAAGTGTCAGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR TCA 90 bp | GATATATCAAATCAATGCATTTCTGTACTGACATGGAATTACGTAGCACAACTGTACGCTGCATTGGTCTaGGAGAGACGGGCCTTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: DISNQCISVLTWNYVAQLYAALV*ERRAFG Trigger: GCCAAAGGCCCGTCTCTCTCAGACCAATGCAGCGTA...CAGTTGTGCTACGTAATTCCATGTCAGTACAGAAATGCATTGATTTGATATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR CCA 90 bp | GGATTTGTGATGATTTGTGATTTGGTAGCAATTACTCATCATTTCAAAGCAAGGACAGTGCTGCCTCCCTaGTGGATACGGTGGGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: GFVMICDLVAITHHFKARTVLPP*WIRWDP Trigger: TGGATCCCACCGTATCCACCAGGGAGGCAGCACTGT...CCTTGCTTTGAAATGATGAGTAATTGCTACCAAATCACAAATCATCACAAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTCTTCCTAGGTTGCAAAACTTAGAAATAAGACAGGAAGTTTCCAGAGGGGGGGAAATCATCCTCTaGGGGAAGGCAGGATCATCA | + |
|
Preference number: 2 (lower is better) Translates to: KCLPRLQNLEIRQEVSRGGEIIL*GKAGSS Trigger: TGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCC...CCCTCTGGAAACTTCCTGTCTTATTTCTAAGTTTTGCAACCTAGGAAGACATTT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATCCAACAGTTAGGTAGGAACTGTAGCTaGTTATTAGCTAATCGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SSSGGRQDHHQTYVIQQLGRNCS*LLANRR Trigger: TCTTCGATTAGCTAATAACCAGCTACAGTTCCTACC...TAACTGTTGGATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR-3UTR TCA 90 bp | GATATATCAAATCAATGCATTTCTGTACTGACATGGAATTACGTAGCACAACTGTGCCTTTGGAGCTTCTaGGTAGACAGTGCTGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: DISNQCISVLTWNYVAQLCLWSF*VDSAAS Trigger: GGAGGCAGCACTGTCTACTCAGAAGCTCCAAAGGCA...CAGTTGTGCTACGTAATTCCATGTCAGTACAGAAATGCATTGATTTGATATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTTCTTCAGGGAACTGCAGCTCGCTTTAAATTAGATGTGGGGAAGCTCATTGAAGTCAGAGGAAAATaGAGGCAATTTCATGTACCG | + |
|
Preference number: 2 (lower is better) Translates to: RVLQGTAARFKLDVGKLIEVRGK*RQFHVP Trigger: CGGTACATGAAATTGCCTTCATTTTCCTCTGACTTC...AATGAGCTTCCCCACATCTAATTTAAAGCGAGCTGCAGTTCCCTGAAGAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTTCTTCAGGGAACTGCAGCTCGCTTTAAATTAGATGTGGGGAAGCTCATTATCAATGGGCAAAGATaGAAGATGGTTTCCAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RVLQGTAARFKLDVGKLIINGQR*KMVSSH Trigger: ATGGCTGGAAACCATCTTGCATCTTTGCCCATTGAT...AATGAGCTTCCCCACATCTAATTTAAAGCGAGCTGCAGTTCCCTGAAGAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATGTCTTCCTAGGTTGCAAAACTTAGAAATAAGACAGGAAGTTTCCAGAGGGCCAAGCAAGCCTTCTTaGTTCCCCTTTCAGTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: KCLPRLQNLEIRQEVSRGPSKPS*FPFQSC Trigger: ACAAGACTGAAAGGGGAATCAAGAAGGCTTGCTTGG...CCCTCTGGAAACTTCCTGTCTTATTTCTAAGTTTTGCAACCTAGGAAGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATGTCTTCCTAGGTTGCAAAACTTAGAAATAAGACAGGAAGTTTCCAGAGGGAGCTCATGGGATTTTTaGAAAGGTGGGATGTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: KCLPRLQNLEIRQEVSRGSSWDF*KGGMWT Trigger: GGTCCACATCCCACCTTTGCAAAAATCCCATGAGCT...CCCTCTGGAAACTTCCTGTCTTATTTCTAAGTTTTGCAACCTAGGAAGACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR GCA 90 bp | TATGAAAATGGTTCCAGAATGCAGTATAAAGCAGAAGCAAGGTGTCCCAAATTAGGGAGAAGAAAGGCATaGTGGGTGGGGTGTATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: YENGSRMQYKAEARCPKLGRRKA*WVGCIY Trigger: ATAAATACACCCCACCCAGCATGCCTTTCTTCTCCC...TAATTTGGGACACCTTGCTTCTGCTTTATACTGCATTCTGGAACCATTTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR GCA 90 bp | GCCTTCTTGATTCCCCTTTCAGTCTTGTCTTACATAAATCATACCAGTAAACAGCATGATCCTTCTCTGTaGCTATTGTCTTCACCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: AFLIPLSVLSYINHTSKQHDPSL*LLSSPL Trigger: CAGAGGTGAAGACAATAGGCACAGAGAAGGATCATG...CTGTTTACTGGTATGATTTATGTAAGACAAGACTGAAAGGGGAATCAAGAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR CAA 90 bp | CCAACCAAAGTTTTGGGAAATAGCTTTCCCACCAAGCAAGCCTTCTaGATTCCCCTTTCAGTCTTGTCTTACATAAATCATACCAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: PTKVLGNSFPTKQAF*IPLSVLSYINHTSK Trigger: TTTACTGGTATGATTTATGTAAGACAAGACTGAAAGGGGAATCAAGAAGGCTTGCTTGGTGGGAAAGCTATTTCCCAAAACTTTGGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR CCA 90 bp | GATATATCAAATCAATGCATTTCTGTACTGACATGGAATTACGTAGCACAACTGCTCCTTCCTGTGAATTaGCACAGCATTGGCTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: DISNQCISVLTWNYVAQLLLPVN*HSIGFL Trigger: AAGGAAGCCAATGCTGTGCCAATTCACAGGAAGGAG...CAGTTGTGCTACGTAATTCCATGTCAGTACAGAAATGCATTGATTTGATATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTCTTCCTAGGTTGCAAAACTTAGAAATAAGACAGGAAGTTTCCAGAGGGGAATTACAGTCAGGCTaGCTAACAAAATGTCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: KCLPRLQNLEIRQEVSRGELQSG*LTKCHQ Trigger: TTGGTGACATTTTGTTAGCCAGCCTGACTGTAATTC...CCCTCTGGAAACTTCCTGTCTTATTTCTAAGTTTTGCAACCTAGGAAGACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR CCA 90 bp | GATATATCAAATCAATGCATTTCTGTACTGACATGGAATTACGTAGCACAACTGAGAAGAAAGGCATGCTaGGTGGGGTGTATTTATATA | + |
|
Preference number: 2 (lower is better) Translates to: DISNQCISVLTWNYVAQLRRKAC*VGCIYI Trigger: TATATAAATACACCCCACCCAGCATGCCTTTCTTCT...CAGTTGTGCTACGTAATTCCATGTCAGTACAGAAATGCATTGATTTGATATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR CCA 90 bp | GATATATCAAATCAATGCATTTCTGTACTGACATGGAATTACGTAGCACAACTGGGTATTTACACAGAATaGAGATTGTGCAAGGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: DISNQCISVLTWNYVAQLGIYTE*RLCKVW Trigger: CCAAACCTTGCACAATCTCCATTCTGTGTAAATACC...CAGTTGTGCTACGTAATTCCATGTCAGTACAGAAATGCATTGATTTGATATATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR GCA 90 bp | ATTTTTACCTTAAAGAATTTGAGTGTATTCTCCTTACCCCTCAACTTTGGCTTCGAACTACCAACAGGCTaGAGATTATTAATATATCTG | + |
|
Preference number: 2 (lower is better) Translates to: IFTLKNLSVFSLPLNFGFELPTG*RLLIYL Trigger: CAGATATATTAATAATCTGCAGCCTGTTGGTAGTTC...GAAGCCAAAGTTGAGGGGTAAGGAGAATACACTCAAATTCTTTAAGGTAAAAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTTACCTTAAAGAATTTGAGTGTATTCTCCTTACCCCTCAACTTTGGCTTCTGCTATAAATGCTTTTaGGGACATTTTTGCAACACT | + |
|
Preference number: 2 (lower is better) Translates to: IFTLKNLSVFSLPLNFGFCYKCF*GHFCNT Trigger: AGTGTTGCAAAAATGTCCCCAAAAGCATTTATAGCA...GAAGCCAAAGTTGAGGGGTAAGGAGAATACACTCAAATTCTTTAAGGTAAAAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR CCA 72 bp | GGACAGGGCAGGCAGGATGGAAGGGTCTGTCCTGCCTaGCTGGACTCTCCTGGCCTGGCCGCACACACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GQGRQDGRVCPA*LDSPGLAAHTG Trigger: GCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCAGGACAGACCCTTCCATCCTGCCTGCCCTGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR GCA 72 bp | CTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTaGCCTGCTATGCTGGCTGCTGAGGCCATAGGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LCRSLAAPARAP*PAMLAAEAIGV Trigger: AACGCCTATGGCCTCAGCAGCCAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CCA 72 bp | GCTGGACTCTCCTGGCCTGGCCGCACACACTGGCGATaGAAGGCAGTCGCAGTGGCTGAGCTGGCAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AGLSWPGRTHWR*KAVAVAELAVL Trigger: GAGCACTGCCAGCTCAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CCA 72 bp | TGCCTGGCTGGACTCTCCTGGCCTGGCCGCACACACTaGCGATGGAAGGCAGTCGCAGTGGCTGAGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CLAGLSWPGRTH*RWKAVAVAELA Trigger: TGCCAGCTCAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR GCA 72 bp | GAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTGTaGCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: EVSRGRVLWSQL*LCRSLAAPARA Trigger: TGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGGCACAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CCA 72 bp | GAAGGGTCTGTCCTGCCTGGCTGGACTCTCCTGGCCTaGCCGCACACACTGGCGATGGAAGGCAGTCGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EGSVLPGWTLLA*PHTLAMEGSRS Trigger: ACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCAGGACAGACCCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CCA 72 bp | TTTCCAGCCATGGAGAGCTCATTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACACAGCATAGCCGATTG | + |
|
Preference number: 3 (lower is better) Translates to: FPAMESSLRLGS*QRWRGTQHSRL Trigger: CAATCGGCTATGCTGTGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR TCA 72 bp | AAGATGCAAGATGGTTTCCAGCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGAGATGGCGCGGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: KMQDGFQPWRAH*GWAAGRDGAAH Trigger: GTGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCATCTTGCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR GCA 72 bp | TGGCCACACATGGCATGCATGGCCGCTTTCTGCCTCTaGCATTACTTGGAAGAGTCTGCTTTTCAGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WPHMACMAAFCL*HYLEESAFQAA Trigger: TGCTGCCTGAAAAGCAGACTCTTCCAAGTAATGGCAGAGGCAGAAAGCGGCCATGCATGCCATGTGTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CCA 72 bp | CCAGATGAAAATGTCAGCAGCCTCACCTCTGACAATTaGATGGGGATGCCACAGCCGTTGCAGCCGATGACT | + |
|
Preference number: 3 (lower is better) Translates to: PDENVSSLTSDN*MGMPQPLQPMT Trigger: AGTCATCGGCTGCAACGGCTGTGGCATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATTTTCATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGGAAATCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATACACAGCATAGCCGATaGCGGTCCACAGTGAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PGEIILWGKAGSSPNVCHTQHSR*RSTVRY Trigger: GTACCTCACTGTGGACCGCAATCGGCTATGCTGTGT...ATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR TCA 72 bp | ACAGCCGTTGCAGCCGATGACTTTGTTGTAGAGGTATaGGGGCAGGCCCTTCAGCTGGATGTTGTTATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TAVAADDFVVEV*GQALQLDVVIH Trigger: GTGGATAACAACATCCAGCTGAAGGGCCTGCCCTCATACCTCTACAACAAAGTCATCGGCTGCAACGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| 3UTR GCA 72 bp | ATCTGCAAGGTTAGGGATGGCTGGTGTTTCATACGCTaGATTGGTCTGAGAGAGACGGGCCTTTGGCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: ICKVRDGWCFIR*IGLRETGLWHC Trigger: GCAATGCCAAAGGCCCGTCTCTCTCAGACCAATGCAGCGTATGAAACACCAGCCATCCCTAACCTTGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR CCA 72 bp | CCCAGAGAGCTCATCTCTCTGGCAAGGGAAAGCTCATaGGATTTTTGCAAAGGTGGGATGTGGACCCGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PRELISLARESS*DFCKGGMWTRS Trigger: TGAACGGGTCCACATCCCACCTTTGCAAAAATCCCATGAGCTTTCCCTTGCCAGAGAGATGAGCTCTCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CCA 72 bp | ACGATCTCTAAGGCATTGTCACTGAGATCCAGACACTaGAGTTTCACGAGGGACCCGATGGCTTCTGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: TISKALSLRSRH*SFTRDPMASGT Trigger: GGTTCCAGAAGCCATCGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR TCA 72 bp | AGACTCCGCATGGTCAGTTCTTGCAGAGGCAGGACATaGTCCTTCTCTGTGCCTATTGTCTTCACCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLRMVSSCRGRT*SFSVPIVFTSA Trigger: AGCAGAGGTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| 3UTR GCA 72 bp | ACAAAAAGTTCAGATCTTTCCAAAGCCCGTGGTAGGTaGGGTAGAGACTCCGCATGGTCAGTTCTTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TKSSDLSKARGR*GRDSAWSVLAE Trigger: CTCTGCAAGAACTGACCATGCGGAGTCTCTACCGCACCTACCACGGGCTTTGGAAAGATCTGAACTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGCTCCTAAGAATAATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGTCACCAACCAAAGTTTaGGGAAATAGCTTTCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: EKLLRIISRGNHPLGEGRSPTKV*GNSFPT Trigger: GGTGGGAAAGCTATTTCCCAAAACTTTGGTTGGTGA...CCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATTATTCTTAGGAGCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR TCA 72 bp | GGTAGGAACTGTAGCTGGTTATTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCACCGATTTCTGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRNCSWLLANRR*RNALRPPISGQ Trigger: TTGCCCAGAAATCGGTGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAATAACCAGCTACAGTTCCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATCCAACAGTTAACCAAGCAAGCCTTCTaGATTCCCCTTTCAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSSGGRQDHHQTYVIQQLTKQAF*IPLSVL Trigger: CAAGACTGAAAGGGGAATCAAGAAGGCTTGCTTGGT...TAACTGTTGGATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCTGTGTTTCCCTGTCGTTCAATTAAGTCAAGCACGGATGTGAAGTGTCAGAAAGAAGAGATACACTaGATCCAGACGCTCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPVFPCRSIKSSTDVKCQKEEIH*IQTLSS Trigger: GGAGCTGAGCGTCTGGATCAAGTGTATCTCTTCTTT...CTGACACTTCACATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTCTTGATTCCCCTTTCAGTCTTGTCTTACATAAATCATACCAGTAAACAGCCACGAAGCCAATACTaGTCCTCCTCTGGTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AFLIPLSVLSYINHTSKQPRSQY*SSSGAG Trigger: GCCTGCACCAGAGGAGGACAAGTATTGGCTTCGTGG...CTGTTTACTGGTATGATTTATGTAAGACAAGACTGAAAGGGGAATCAAGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR TCA 72 bp | TCCTGCCTTCAGCTTATATACATGTCGGGGTTGTGCTaGAACTTCCATTCTTCCGAAAGGATGAAAGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCLQLIYMSGLC*NFHSSERMKEE Trigger: CTCTTCTTTCATCCTTTCGGAAGAATGGAAGTTTCAGCACAACCCCGACATGTATATAAGCTGAAGGCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CCA 72 bp | CTTTTGTTTGCATCGCTTTTTCTCCTTCCTGTGAATTaGCACAGCATTGGCTTCCTTAAGGCTAACTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLFASLFLLPVN*HSIGFLKANYL Trigger: GAGGTAGTTAGCCTTAAGGAAGCCAATGCTGTGCCAATTCACAGGAAGGAGAAAAAGCGATGCAAACAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCTGTGTTTCCCTGTCGTTCAATTAAGTCAAGCACGGATGTGAAGTGTCAGTGTGGGGAAGCTCATTaGACTAAGTTTATATATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SPVFPCRSIKSSTDVKCQCGEAH*TKFIYE Trigger: CTCATATATAAACTTAGTCAAATGAGCTTCCCCACA...CTGACACTTCACATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR GCA 72 bp | AATACCACTAAGCCCCATCCACAGCAGAGCATCAGATaGCTCAAACTTCCCAATTATAGGAAAATCTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NTTKPHPQQSIR*LKLPNYRKILA Trigger: TGCTAAGATTTTCCTATAATTGGGAAGTTTGAGGCATCTGATGCTCTGCTGTGGATGGGGCTTAGTGGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR-3UTR CAA 90 bp | GGATTTGTGATGATTTGTGATTTGGTAGCAATTACTCATCATTTCAAAGCAAGGTCTCCTTCCTGTGAATaGGCACAGCATTGGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GFVMICDLVAITHHFKARSPSCE*AQHWLP Trigger: AGGAAGCCAATGCTGTGCCAATTCACAGGAAGGAGA...CCTTGCTTTGAAATGATGAGTAATTGCTACCAAATCACAAATCATCACAAATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTTCTATTATCAAATTAAGAGTTCTTCAGGGAACTGCAGCTCGCTTTAAAACGATCTCTAAGGCATaGTCACTGAGATCCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: FGSIIKLRVLQGTAARFKTISKA*SLRSRH Trigger: GTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGT...TTTAAAGCGAGCTGCAGTTCCCTGAAGAACTCTTAATTTGATAATAGAACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| 3UTR-3UTR CAA 90 bp | GATATATCAAATCAATGCATTTCTGTACTGACATGGAATTACGTAGCACAACTGCGAGGATGTGAACTTTaGTTTGCATCGCTTTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DISNQCISVLTWNYVAQLRGCEL*FASLFL Trigger: GAGAAAAAGCGATGCAAACAAAAGTTCACATCCTCG...CAGTTGTGCTACGTAATTCCATGTCAGTACAGAAATGCATTGATTTGATATATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR-3UTR CAA 90 bp | AAATGTCTTCCTAGGTTGCAAAACTTAGAAATAAGACAGGAAGTTTCCAGAGGGTGTGGGGAAGCTCATTaGACTAAGTTTATATATGAG | + |
|
Preference number: 3 (lower is better) Translates to: KCLPRLQNLEIRQEVSRGCGEAH*TKFIYE Trigger: CTCATATATAAACTTAGTCAAATGAGCTTCCCCACA...CCCTCTGGAAACTTCCTGTCTTATTTCTAAGTTTTGCAACCTAGGAAGACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| CDS-3UTR TCA 90 bp | GACTCTCCTGGCCTGGCCGCACACACTGGCGATGGAAGGCAGTCGCAGTGGCTGCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSPGLAAHTGDGRQSQWLPWRAH*GWAAGR Trigger: TCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGG...CAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | GGCCGCACACACTGGCGATGGAAGGCAGTCGCAGTGGCTGAGCTGGCAGTGCTCCTGAGATCCAGACACTaGAGTTTCACGAGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRTHWRWKAVAVAELAVLLRSRH*SFTRDP Trigger: CGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAG...GAGCACTGCCAGCTCAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | GGCCGCACACACTGGCGATGGAAGGCAGTCGCAGTGGCTGAGCTGGCAGTGCTCAGAGAAAGGCACAGGTaGAGCCTCTCGGGTAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRTHWRWKAVAVAELAVLRERHR*SLSGKA Trigger: AGCTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCT...GAGCACTGCCAGCTCAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTGCCCTGCTATGCTGCATGATCCTTCTCTGTaGCTATTGTCTTCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLCRSLAAPARAPCPAMLHDPSL*LLSSPL Trigger: CAGAGGTGAAGACAATAGGCACAGAGAAGGATCATG...CAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | GTGGCCACACATGGCATGCATGGCCGCTTTCTGCCTCTGCCATTACTTGGAAGAGGCAGCTGGCAGAGATaGCGCGGCACACAGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VATHGMHGRFLPLPLLGRGSWQR*RGTQHS Trigger: GCTATGCTGTGTGCCGCGCCATCTCTGCCAGCTGCC...TCTTCCAAGTAATGGCAGAGGCAGAAAGCGGCCATGCATGCCATGTGTGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | GACTCTCCTGGCCTGGCCGCACACACTGGCGATGGAAGGCAGTCGCAGTGGCTGGCTCCAGGAGACTTCTaGGTAATGAGATTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: DSPGLAAHTGDGRQSQWLAPGDF*VMRLET Trigger: TGTCTCCAATCTCATTACCCAGAAGTCTCCTGGAGC...CAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTGCCCTGCTATGCTGGCCACAACTATGTTATTTaGGTGAAGGTACAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLQEPSCSSPGTLPCYAGHNYVI*VKVQFH Trigger: GTGGAACTGTACCTTCACTCAAATAACATAGTTGTG...GCCAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTGCCCTGCTATGCTGATCAATGGGCAAAGATaGAAGATGGTTTCCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLCRSLAAPARAPCPAMLINGQR*KMVSSH Trigger: ATGGCTGGAAACCATCTTGCATCTTTGCCCATTGAT...CAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | TTGCAGAGGCAGGACATGATCCTTCTCTGTGCCTATTGTCTTCACCTCTGCTGGGGCAGCTGGCAGAGATaGCGCGGCACACAGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQRQDMILLCAYCLHLCWGSWQR*RGTQHS Trigger: GCTATGCTGTGTGCCGCGCCATCTCTGCCAGCTGCC...CCAGCAGAGGTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAGACTCCGCATGGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTTTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VETPHGQFLQRQDMILLCLRLGS*QRWRGT Trigger: TGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAA...ACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGTCTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCCCTGCTATGCTGGCTGCTGAGGCCATAGGCGTTGCAGAGACTCTAGAATGTCTTCACCTCTGCTaGGAGGAAGACTGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCPAMLAAEAIGVAETLECLHLC*EEDCQL Trigger: CAGCTGACAGTCTTCCTCCCAGCAGAGGTGAAGACA...TTCTAGAGTCTCTGCAACGCCTATGGCCTCAGCAGCCAGCATAGCAGGGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | AACTTAGAAATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTGTTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NLEIRQEVSRGRVLWSQLLRLGS*QRWRGT Trigger: TGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAA...CAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGCCCTGCTATGCTGGCTGCTGAGGCCATAGGCGTTGCAGAGACTCTAGAAGGCAAAGATGCAAGATaGTTTCCAGCCATGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCPAMLAAEAIGVAETLEGKDAR*FPAMES Trigger: GCTCTCCATGGCTGGAAACCATCTTGCATCTTTGCC...TTCTAGAGTCTCTGCAACGCCTATGGCCTCAGCAGCCAGCATAGCAGGGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR GCA 90 bp | AACTTAGAAATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTGAGCCTCTCCAGGTGCTaGAGCCCCTCATCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLEIRQEVSRGRVLWSQLSLSRC*SPSSFS Trigger: GCTGAAGGATGAGGGGCTGCAGCACCTGGAGAGGCT...CAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| CDS-3UTR GCA 90 bp | GATCTTAGGATAGACGAAGGTAAACATGGGCTCACTACACAGGTGACAGTGCCCAGCCTCTCCAGGTGCTaGAGCCCCTCATCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLRIDEGKHGLTTQVTVPSLSRC*SPSSFS Trigger: GCTGAAGGATGAGGGGCTGCAGCACCTGGAGAGGCT...GGGCACTGTCACCTGTGTAGTGAGCCCATGTTTACCTTCGTCTATCCTAAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCAGGCCACATTTTCCTGCCTTCAGCTTATATACATGTCGGGGTTGTGCTGCCCCAGGGGGCAGTaGAGCAGCTCCAGGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KCQATFSCLQLIYMSGLCCPRGQ*SSSRRL Trigger: AAGTCTCCTGGAGCTGCTGCACTGCCCCCTGGGGCA...GCACAACCCCGACATGTATATAAGCTGAAGGCAGGAAAATGTGGCCTGACACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| 3UTR CAA 72 bp | GTGGTAGGTGCGGTAGAGACTCCGCATGGTCAGTTCTaGCAGAGGCAGGACATGATCCTTCTCTGTGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VVGAVETPHGQF*QRQDMILLCAY Trigger: ATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGTCTCTACCGCACCTACCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGGAAATCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATACAATTGGATGGGGATaGCACAGCCGTTGCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGEIILWGKAGSSPNVCHTIGWG*HSRCSR Trigger: TCGGCTGCAACGGCTGTGGCATCCCCATCCAATTGT...ATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCCAGATGAAAATGTCAGCAGCCTCACCTCTGACAATTGGATGGGGATGCTGAGATCCAGACACTaGAGTTTCACGAGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCPDENVSSLTSDNWMGMLRSRH*SFTRDP Trigger: CGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAG...CATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATTTTCATCTGGGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGGAAATCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATCTCACCTCTGACAATTaGATGGGGATGCCACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGEIILWGKAGSSPNVCHLTSDN*MGMPQP Trigger: CGGCTGTGGCATCCCCATCCAATTGTCAGAGGTGAG...ATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | AACTTAGAAATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTGTCCGCAGACACTGGGTaGAGCAGCAGTAAGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: NLEIRQEVSRGRVLWSQLSADTG*SSSKPR Trigger: TCGTGGCTTACTGCTGCTCCACCCAGTGTCTGCGGA...CAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR GCA 90 bp | GTGGCCACACATGGCATGCATGGCCGCTTTCTGCCTCTGCCATTACTTGGAAGATATTGTCTTCACCTCTaGTGGGAGGAAGACTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VATHGMHGRFLPLPLLGRYCLHL*WEEDCQ Trigger: CTGACAGTCTTCCTCCCAGCAGAGGTGAAGACAATA...TCTTCCAAGTAATGGCAGAGGCAGAAAGCGGCCATGCATGCCATGTGTGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAGCCAACAGTGATCATGCCTCCAGGGAAACTGCTTCCCCACACTTGCAGCTAAGGCATTGTCACTaGGATCCAGACACTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISANSDHASRETASPHLQLRHCH*DPDTGV Trigger: AACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAG...CTGCAAGTGTGGGGAAGCAGTTTCCCTGGAGGCATGATCACTGTTGGCTGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR TCA 90 bp | AAGTGTCAGGCCACATTTTCCTGCCTTCAGCTTATATACATGTCGGGGTTGTGCGATTGCGGTCCACAGTaGGGTACTGCAGAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KCQATFSCLQLIYMSGLCDCGPQ*GTAEKG Trigger: GCCTTTCTCTGCAGTACCTCACTGTGGACCGCAATC...GCACAACCCCGACATGTATATAAGCTGAAGGCAGGAAAATGTGGCCTGACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | CCCCCAAAGCAGCCCAACGAACACCTGAAAGTAAAACAGATTATGGTGGCATCCTGTCAGCTGCCCAGATaGAAATGTCAGCAGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPKQPNEHLKVKQIMVASCQLPR*KCQQPH Trigger: GTGAGGCTGCTGACATTTTCATCTGGGCAGCTGACA...GGATGCCACCATAATCTGTTTTACTTTCAGGTGTTCGTTGGGCTGCTTTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAAAACACAGAAGACAACACGTCCTTCATTTGGGGGAGGATGTATTCCGACAGCCTCTCCAGGTGCTaGAGCCCCTCATCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKNTEDNTSFIWGRMYSDSLSRC*SPSSFS Trigger: GCTGAAGGATGAGGGGCTGCAGCACCTGGAGAGGCT...GTCGGAATACATCCTCCCCCAAATGAAGGACGTGTTGTCTTCTGTGTTTTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CAA 72 bp | TTTCATACGCTGCATTGGTCTGAGAGAGACGGGCCTTaGGCATTGCTTTGGGCAGGTAGTGGGAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHTLHWSERDGP*ALLWAGSGRRK Trigger: CTTTCTTCTCCCACTACCTGCCCAAAGCAATGCCAAAGGCCCGTCTCTCTCAGACCAATGCAGCGTATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCGCATGGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTGCCTATCTAAGGCATTGTCACTaGGATCCAGACACTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPHGQFLQRQDMILLCAYLRHCH*DPDTGV Trigger: AACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAG...ATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR TCA 90 bp | GTAGAGACTCCGCATGGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTTTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VETPHGQFLQRQDMILLCLANRR*RNALRP Trigger: TGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAA...ACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGTCTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR TCA 90 bp | AGCCCTGTGTTTCCCTGTCGTTCAATTAAGTCAAGCACGGATGTGAAGTGTCAGTTTGTTGTAGAGGTATaGGGGCAGGCCCTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPVFPCRSIKSSTDVKCQFVVEV*GQALQL Trigger: CAGCTGAAGGGCCTGCCCTCATACCTCTACAACAAA...CTGACACTTCACATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAACACAGAAGACAACACGTCCTTCATTTGGGGGAGGATGTATTCCGACCAGCAGCCTCACCTCTaGCAATTGGATGGGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKNTEDNTSFIWGRMYSDQQPHL*QLDGDA Trigger: GGCATCCCCATCCAATTGTCAGAGGTGAGGCTGCTG...GTCGGAATACATCCTCCCCCAAATGAAGGACGTGTTGTCTTCTGTGTTTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR GCA 90 bp | GAGAAGCTCCTAAGAATAATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGAGGAAGACTGTCAGCTaGCCAGATGAAAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKLLRIISRGNHPLGEGRRKTVS*PDENVS Trigger: GCTGACATTTTCATCTGGGCAGCTGACAGTCTTCCT...CCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATTATTCTTAGGAGCTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCTCCTAAGAATAATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGTGTGCTTTTCAAGCCTaGCCACAGAGATCGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKLLRIISRGNHPLGEGRCAFQA*PQRSSY Trigger: GTAAGACGATCTCTGTGGCCAGGCTTGAAAAGCACA...CCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATTATTCTTAGGAGCTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCCAGATGAAAATGTCAGCAGCCTCACCTCTGACAATTGGATGGGGATGTGTGCTTTTCAAGCCTaGCCACAGAGATCGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SCPDENVSSLTSDNWMGMCAFQA*PQRSSY Trigger: GTAAGACGATCTCTGTGGCCAGGCTTGAAAAGCACA...CATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATTTTCATCTGGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000187953.8 ENSMUST00000191035.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCAGATGAAAATGTCAGCAGCCTCACCTCTGACAATTGGATGGGGATGCCAGTTCCACAAGGTTTaGAAGCTTCTGAGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAQMKMSAASPLTIGWGCQFHKV*KLLSKV Trigger: AACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTG...GCATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATTTTCATCTGGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGCATTGCTTTGGGCAGGTAGTGGGAGAAGAAAGGCATGCTGGGTGGGGGGTAGGAACTGTAGCTaGTTATTAGCTAATCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLALLWAGSGRRKACWVGGRNCS*LLANRR Trigger: TCTTCGATTAGCTAATAACCAGCTACAGTTCCTACC...CCCCACCCAGCATGCCTTTCTTCTCCCACTACCTGCCCAAAGCAATGCCAAAGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR CAA 72 bp | GCTCATCTCTCTGGCAAGGGAAAGCTCATGGGATTTTaGCAAAGGTGGGATGTGGACCCGTTCATTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHLSGKGKLMGF*QRWDVDPFIPS Trigger: AGAAGGAATGAACGGGTCCACATCCCACCTTTGCAAAAATCCCATGAGCTTTCCCTTGCCAGAGAGATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| 3UTR CAA 72 bp | AGACCACCGATTTCTGGGCAAACGATCTCTAAGGCATaGTCACTGAGATCCAGACACTGGAGTTTCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPPISGQTISKA*SLRSRHWSFTR Trigger: CCTCGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGTTTGCCCAGAAATCGGTGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187953.8 |
||
| CDS-3UTR TCA 90 bp | GCATGGTCAGTTCTTGCAGAGGCAGGACATGATCCTTCTCTGTGCCTATTGTCTAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AWSVLAEAGHDPSLCLLSRFGSF*ARFSGK Trigger: CTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCT...AGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR TCA 90 bp | AACTTAGAAATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTGTTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NLEIRQEVSRGRVLWSQLLANRR*RNALRP Trigger: TGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAA...CAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | TCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATCCAACAGTTATGCAGAGGCAGGACATaGTCCTTCTCTGTGCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: SSSGGRQDHHQTYVIQQLCRGRT*SFSVPI Trigger: AATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCA...TAACTGTTGGATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | AAACTTAGAAATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRNKTGSFQRACALEPARFGSF*ARFSGK Trigger: CTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCT...AGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAGCCAACAGTGATCATGCCTCCAGGGAAACTGCTTCCCCACACTTGCAGCACAACTATGTTATTTaGGTGAAGGTACAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISANSDHASRETASPHLQHNYVI*VKVQFH Trigger: GTGGAACTGTACCTTCACTCAAATAACATAGTTGTG...CTGCAAGTGTGGGGAAGCAGTTTCCCTGGAGGCATGATCACTGTTGGCTGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR GCA 90 bp | TTCTGTACTGACATGGAATTACGTAGCACAACTGACACTTTAGTCAGGGTATTTAGCCTCTCCAGGTGCTaGAGCCCCTCATCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCTDMELRSTTDTLVRVFSLSRC*SPSSFS Trigger: GCTGAAGGATGAGGGGCTGCAGCACCTGGAGAGGCT...AAATACCCTGACTAAAGTGTCAGTTGTGCTACGTAATTCCATGTCAGTACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR CCA 90 bp | TCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATCCAACAGTTATGTGCTTTTCAAGCCTaGCCACAGAGATCGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSGGRQDHHQTYVIQQLCAFQA*PQRSSY Trigger: GTAAGACGATCTCTGTGGCCAGGCTTGAAAAGCACA...TAACTGTTGGATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGTATTCCGACTTGAGGGAAAAGCGAAGGCCTTTTAGTTGTGAAGCCCAAGGCAGGCCCTTCAGCTaGATGTTGTTATCCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: RMYSDLREKRRPFSCEAQGRPFS*MLLSTY Trigger: GTATGTGGATAACAACATCCAGCTGAAGGGCCTGCC...TTGGGCTTCACAACTAAAAGGCCTTCGCTTTTCCCTCAAGTCGGAATACATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | AGGATGTATTCCGACTTGAGGGAAAAGCGAAGGCCTTTTAGTTGTGAAGCCCAACTAAGGCATTGTCACTaGGATCCAGACACTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RMYSDLREKRRPFSCEAQLRHCH*DPDTGV Trigger: AACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAG...TTGGGCTTCACAACTAAAAGGCCTTCGCTTTTCCCTCAAGTCGGAATACATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCAGGCCACATTTTCCTGCCTTCAGCTTATATACATGTCGGGGTTGTGCGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCQATFSCLQLIYMSGLCEMSSV*SSFKSP Trigger: TGGCGATTTGAAGGAGCTGCAGACACTAGACATTTC...GCACAACCCCGACATGTATATAAGCTGAAGGCAGGAAAATGTGGCCTGACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS-3UTR CCA 90 bp | GAAGACAACACGTCCTTCATTTGGGGGAGGATGTATTCCGACTTGAGGGAAAAGGGACCCGATGGCTTCTaGAACCACAACTATGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: EDNTSFIWGRMYSDLREKGPDGF*NHNYVI Trigger: AATAACATAGTTGTGGTTCCAGAAGCCATCGGGTCC...CTTTTCCCTCAAGTCGGAATACATCCTCCCCCAAATGAAGGACGTGTTGTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTAGAGGTATGAGGGCAGGCCCTTCAGCTGGATGTTGTTATCCACATACAGGACCCGATGGCTTCTaGAACCACAACTATGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CCRGMRAGPSAGCCYPHTGPDGF*NHNYVI Trigger: AATAACATAGTTGTGGTTCCAGAAGCCATCGGGTCC...TGTATGTGGATAACAACATCCAGCTGAAGGGCCTGCCCTCATACCTCTACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTGTTTGTACAGTGTATGTGTCTTATTAGGGCATCTCCTTGTCCTTCTTCGCTGAGATCCAGACACTaGAGTTTCACGAGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLFVQCMCLIRASPCPSSLRSRH*SFTRDP Trigger: CGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAG...CGAAGAAGGACAAGGAGATGCCCTAATAAGACACATACACTGTACAAACAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCTCCTAAGAATAATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGGGTAGGAACTGTAGCTaGTTATTAGCTAATCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKLLRIISRGNHPLGEGRGRNCS*LLANRR Trigger: TCTTCGATTAGCTAATAACCAGCTACAGTTCCTACC...CCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATTATTCTTAGGAGCTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCCAGATGAAAATGTCAGCAGCCTCACCTCTGACAATTGGATGGGGATGGGTAGGAACTGTAGCTaGTTATTAGCTAATCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCPDENVSSLTSDNWMGMGRNCS*LLANRR Trigger: TCTTCGATTAGCTAATAACCAGCTACAGTTCCTACC...CATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATTTTCATCTGGGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCTTGATTCCCCTTTCAGTCTTGTCTTACATAAATCATACCAGTAAACAGATACTTGTCCTCCTCTaGTGCAGGCCTGCCATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLIPLSVLSYINHTSKQILVLL*CRPAIG Trigger: GCCGATGGCAGGCCTGCACCAGAGGAGGACAAGTAT...CTGTTTACTGGTATGATTTATGTAAGACAAGACTGAAAGGGGAATCAAGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR GCA 90 bp | TTTGGTTCTATTATCAAATTAAGAGTTCTTCAGGGAACTGCAGCTCGCTTTAAACCTCTGGTGCAGGCCTaGCATCGGCGTCTCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FGSIIKLRVLQGTAARFKPLVQA*HRRLSQ Trigger: TTGAGAGAGACGCCGATGGCAGGCCTGCACCAGAGG...TTTAAAGCGAGCTGCAGTTCCCTGAAGAACTCTTAATTTGATAATAGAACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CCA 90 bp | AGCCCTGTGTTTCCCTGTCGTTCAATTAAGTCAAGCACGGATGTGAAGTGTCAGAGCGACCTAAATCAATaGGCAAAGATGCAAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVFPCRSIKSSTDVKCQSDLNQ*AKMQDG Trigger: ACCATCTTGCATCTTTGCCCATTGATTTAGGTCGCT...CTGACACTTCACATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR TCA 90 bp | GTTTTGTTTGTACAGTGTATGTGTCTTATTAGGGCATCTCCTTGTCCTTCTTCGAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLFVQCMCLIRASPCPSSRFGSF*ARFSGK Trigger: CTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCT...CGAAGAAGGACAAGGAGATGCCCTAATAAGACACATACACTGTACAAACAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| CDS-3UTR CCA 90 bp | CCCACACTTGCAGAACTACCAACAGGCTGCAGATTATTAATATATCTGCAAGGTGGACCCGATGGCTTCTaGAACCACAACTATGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PTLAELPTGCRLLIYLQGGPDGF*NHNYVI Trigger: AATAACATAGTTGTGGTTCCAGAAGCCATCGGGTCC...ACCTTGCAGATATATTAATAATCTGCAGCCTGTTGGTAGTTCTGCAAGTGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR CCA 90 bp | TATGAAAATGGTTCCAGAATGCAGTATAAAGCAGAAGCAAGGTGTCCCAAATTAGCAGAGGCACTGAAGTaGCCATGTCATCTTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: YENGSRMQYKAEARCPKLAEALK*PCHLHV Trigger: CACATGAAGATGACATGGCCACTTCAGTGCCTCTGC...TAATTTGGGACACCTTGCTTCTGCTTTATACTGCATTCTGGAACCATTTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| 3UTR CAA 72 bp | AGAGATCACACACTTGTCAGTAACTATGTAGGATTTTaGGCACTGTTAGAGCCTAGAATTACAGTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDHTLVSNYVGF*ALLEPRITVRL Trigger: CAGCCTGACTGTAATTCTAGGCTCTAACAGTGCCAAAAATCCTACATAGTTACTGACAAGTGTGTGATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| CDS-3UTR TCA 90 bp | GATATATCAAATCAATGCATTTCTGTACTGACATGGAATTACGTAGCACAACTGTTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DISNQCISVLTWNYVAQLLANRR*RNALRP Trigger: TGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAA...CAGTTGTGCTACGTAATTCCATGTCAGTACAGAAATGCATTGATTTGATATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR CCA 90 bp | GATTTTTACCTTAAAGAATTTGAGTGTATTCTCCTTACCCCTCAACTTTGGCTTTGTGCTTTTCAAGCCTaGCCACAGAGATCGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: DFYLKEFECILLTPQLWLCAFQA*PQRSSY Trigger: GTAAGACGATCTCTGTGGCCAGGCTTGAAAAGCACA...AAGCCAAAGTTGAGGGGTAAGGAGAATACACTCAAATTCTTTAAGGTAAAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR CCA 90 bp | GATTTTTACCTTAAAGAATTTGAGTGTATTCTCCTTACCCCTCAACTTTGGCTTCTGAGCAAGGTTTTCTaGCAAGGTTGTGAGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DFYLKEFECILLTPQLWLLSKVF*QGCEGV Trigger: AACTCCCTCACAACCTTGCCAGAAAACCTTGCTCAG...AAGCCAAAGTTGAGGGGTAAGGAGAATACACTCAAATTCTTTAAGGTAAAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| 3UTR CAA 72 bp | GTTTTGGGAAATAGCTTTCCCACCAAGCAAGCCTTCTaGATTCCCCTTTCAGTCTTGTCTTACATAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLGNSFPTKQAF*IPLSVLSYINH Trigger: ATGATTTATGTAAGACAAGACTGAAAGGGGAATCAAGAAGGCTTGCTTGGTGGGAAAGCTATTTCCCAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053950.10 ENSMUST00000187953.8 |
||
| CDS-3UTR CCA 90 bp | GATATATCAAATCAATGCATTTCTGTACTGACATGGAATTACGTAGCACAACTGCAGTTCCACAAGGTTTaGAAGCTTCTGAGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DISNQCISVLTWNYVAQLQFHKV*KLLSKV Trigger: AACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTG...CAGTTGTGCTACGTAATTCCATGTCAGTACAGAAATGCATTGATTTGATATATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTCTATTATCAAATTAAGAGTTCTTCAGGGAACTGCAGCTCGCTTTAAACAGTTCCACAAGGTTTaGAAGCTTCTGAGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FGSIIKLRVLQGTAARFKQFHKV*KLLSKV Trigger: AACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTG...TTTAAAGCGAGCTGCAGTTCCCTGAAGAACTCTTAATTTGATAATAGAACCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTGCCCTGCTATGCTGGCCCGCATGGTCAGTTCTaGCAGAGGCAGGACATGATC | + |
|
Preference number: 5 (lower is better) Translates to: PLQEPSCSSPGTLPCYAGPHGQF*QRQDMI Trigger: GATCATGTCCTGCCTCTGCAAGAACTGACCATGCGG...GCCAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCCTGCCCTGCTATGCTGCCACGAAGCCAATACTaGTCCTCCTCTGGTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLCRSLAAPARAPCPAMLPRSQY*SSSGAG Trigger: GCCTGCACCAGAGGAGGACAAGTATTGGCTTCGTGG...CAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAGAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS TCA 90 bp | GGCAGAGATGGCGCGGCACACAGCATAGCCGATTGCGGTCCACAGTaGGGTACTGCAGAGAAAGGCACAGGTGAAGCCTCTCGGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRDGAAHSIADCGPQ*GTAEKGTGEASRVK Trigger: CTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGCAATCGGCTATGCTGTGTGCCGCGCCATCTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS GCA 90 bp | GAGGGCAGGCCCTTCAGCTGGATGTTGTTATCCACATACACGTACTaGAGTTCTCGGGAGCGACCTAAATCTGGAGGTAGGAACTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGRPFSWMLLSTYTY*SSRERPKSGGRNCS Trigger: GCTACAGTTCCTACCTCCAGATTTAGGTCGCTCCCGAGAACTGCAGTACGTGTATGTGGATAACAACATCCAGCTGAAGGGCCTGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190276.7 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCTGGAGCCAGCTGTGACACAGCATAGCCGATaGCGGTCCACAGTGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LRNKTGSFQRACALEPAVTQHSR*RSTVRY Trigger: GTACCTCACTGTGGACCGCAATCGGCTATGCTGTGT...CACAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS TCA 90 bp | AGCCGATTGCGGTCCACAGTGAGGTACTGCAGAGAAAGGCACAGGTaGAGCCTCTCGGGTAAAGCTAGCAAGCGATTGCTAGAAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRLRSTVRYCRERHR*SLSGKASKRLLEMS Trigger: AGACATTTCTAGCAATCGCTTGCTAGCTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGCAATCGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CAA 90 bp | GATCTTAGGATAGACGAAGGTAAACATGGGCTCACTACACAGGTGACAGTGCCCACACAGCATAGCCGATaGCGGTCCACAGTGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DLRIDEGKHGLTTQVTVPTQHSR*RSTVRY Trigger: GTACCTCACTGTGGACCGCAATCGGCTATGCTGTGT...GGGCACTGTCACCTGTGTAGTGAGCCCATGTTTACCTTCGTCTATCCTAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS GCA 90 bp | CTCTCGGGTAAAGCTAGCAAGCGATTGCTAGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCAACCTCTGGAGGTAGGAACTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGKASKRLLEMSSV*SSFKSPTSGGRNCS Trigger: GCTACAGTTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTAGCAATCGCTTGCTAGCTTTACCCGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS-3UTR CAA 90 bp | AGCTGCCCAGATGAAAATGTCAGCAGCCTCACCTCTGACAATTGGATGGGGATGACAGTTCCACAAGGTTaGGAAGCTTCTGAGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCPDENVSSLTSDNWMGMTVPQG*EASEQG Trigger: ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGT...CATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATTTTCATCTGGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
||
| CDS TCA 90 bp | ACCTCTGGAGGTAGGAACTGTAGCTGGTTATTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCACCGATTTCTGGGCAAACGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSGGRNCSWLLANRR*RNALRPPISGQTIS Trigger: AGAGATCGTTTGCCCAGAAATCGGTGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAATAACCAGCTACAGTTCCTACCTCCAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
||
| CDS TCA 90 bp | AAGTCTGGAGGTAGGAACTGTAGCTGGTTATTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCACCGATTTCTGGGCAAACGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KSGGRNCSWLLANRR*RNALRPPISGQTIS Trigger: AGAGATCGTTTGCCCAGAAATCGGTGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAATAACCAGCTACAGTTCCTACCTCCAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
||
| CDS-3UTR CAA 90 bp | TCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATGTCATCCAACAGTTAACAGTTCCACAAGGTTaGGAAGCTTCTGAGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSGGRQDHHQTYVIQQLTVPQG*EASEQG Trigger: ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGT...TAACTGTTGGATGACATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS TCA 90 bp | AAATCTGGAGGTAGGAACTGTAGCTGGTTATTAGCTAATCGAAGATaGCGCAACGCTCTCAGACCACCGATTTCTGGGCAAACGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: KSGGRNCSWLLANRR*RNALRPPISGQTIS Trigger: AGAGATCGTTTGCCCAGAAATCGGTGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAATAACCAGCTACAGTTCCTACCTCCAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190276.7 |
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| CDS-3UTR CAA 90 bp | ATGAGATTGGAGACAAAAAGTTCAGATCTTTCCAAAGCCCGTGGTAGGTGCGGTACGATCTCTAAGGCATaGTCACTGAGATCCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: MRLETKSSDLSKARGRCGTISKA*SLRSRH Trigger: GTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGT...ACCGCACCTACCACGGGCTTTGGAAAGATCTGAACTTTTTGTCTCCAATCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191035.8 |
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| CDS-3UTR CAA 90 bp | AATCTCCAGGGGAAATCATCCTCTGGGGGAAGGCAGGATCATCACCAAACGTATCCACAACTATGTTATTaGAGTGAAGGTACAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: NLQGKSSSGGRQDHHQTYPQLCY*SEGTVP Trigger: TGGAACTGTACCTTCACTCAAATAACATAGTTGTGG...ATACGTTTGGTGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS-3UTR CAA 90 bp | AAATTAAGAGTTCTTCAGGGAACTGCAGCTCGCTTTAAATTAGATGTGGGGAAGCCTTCTCTGTGCCTATaGTCTTCACCTCTGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: KLRVLQGTAARFKLDVGKPSLCL*SSPLLG Trigger: TCCCAGCAGAGGTGAAGACAATAGGCACAGAGAAGG...CTTCCCCACATCTAATTTAAAGCGAGCTGCAGTTCCCTGAAGAACTCTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS-3UTR CAA 90 bp | TGTGAACTTTTGTTTGCATCGCTTTTTCTCCTTCCTGTGAATTGGCACAGCATTACGATCTCTAAGGCATaGTCACTGAGATCCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: CELLFASLFLLPVNWHSITISKA*SLRSRH Trigger: GTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGT...AATGCTGTGCCAATTCACAGGAAGGAGAAAAAGCGATGCAAACAAAAGTTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| CDS-3UTR CAA 90 bp | AAATTAAGAGTTCTTCAGGGAACTGCAGCTCGCTTTAAATTAGATGTGGGGAAGACGATCTCTAAGGCATaGTCACTGAGATCCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: KLRVLQGTAARFKLDVGKTISKA*SLRSRH Trigger: GTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGT...CTTCCCCACATCTAATTTAAAGCGAGCTGCAGTTCCCTGAAGAACTCTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS-3UTR CAA 90 bp | TATGAAAATGGTTCCAGAATGCAGTATAAAGCAGAAGCAAGGTGTCCCAAATTAACAGTTCCACAAGGTTaGGAAGCTTCTGAGCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: YENGSRMQYKAEARCPKLTVPQG*EASEQG Trigger: ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGT...TAATTTGGGACACCTTGCTTCTGCTTTATACTGCATTCTGGAACCATTTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| CDS-3UTR CAA 90 bp | AAATGTCTTCCTAGGTTGCAAAACTTAGAAATAAGACAGGAAGTTTCCAGAGGGAAAGCTAGCAAGCGATaGCTAGAAATGTCTAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: KCLPRLQNLEIRQEVSRGKASKR*LEMSSV Trigger: GACACTAGACATTTCTAGCAATCGCTTGCTAGCTTT...CCCTCTGGAAACTTCCTGTCTTATTTCTAAGTTTTGCAACCTAGGAAGACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS-3UTR CAA 90 bp | ATTTTTACCTTAAAGAATTTGAGTGTATTCTCCTTACCCCTCAACTTTGGCTTCCCACAACTATGTTATTaGAGTGAAGGTACAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: IFTLKNLSVFSLPLNFGFPQLCY*SEGTVP Trigger: TGGAACTGTACCTTCACTCAAATAACATAGTTGTGG...GAAGCCAAAGTTGAGGGGTAAGGAGAATACACTCAAATTCTTTAAGGTAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032775.12 |
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| CDS TCA 72 bp | GGCGCGGCACACAGCATAGCCGATTGCGGTCCACAGTaGGGTACTGCAGAGAAAGGCACAGGTGAAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GAAHSIADCGPQ*GTAEKGTGEAS Trigger: AGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGCAATCGGCTATGCTGTGTGCCGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS CAA 72 bp | AGCTGGCAGAGATGGCGCGGCACACAGCATAGCCGATaGCGGTCCACAGTGAGGTACTGCAGAGAAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SWQRWRGTQHSR*RSTVRYCRERH Trigger: GTGCCTTTCTCTGCAGTACCTCACTGTGGACCGCAATCGGCTATGCTGTGTGCCGCGCCATCTCTGCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS TCA 72 bp | CGGTCCACAGTGAGGTACTGCAGAGAAAGGCACAGGTaGAGCCTCTCGGGTAAAGCTAGCAAGCGATTGCTA | + |
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Preference number: 6 (lower is better) Translates to: RSTVRYCRERHR*SLSGKASKRLL Trigger: TAGCAATCGCTTGCTAGCTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCACTGTGGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS GCA 72 bp | AAAGCTAGCAAGCGATTGCTAGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCAACCTCTGGAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: KASKRLLEMSSV*SSFKSPTSGGR Trigger: CCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTAGCAATCGCTTGCTAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053950.10 |
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| CDS CAA 72 bp | GGGACCCGATGGCTTCTGGAACCACAACTATGTTATTaGAGTGAAGGTACAGTTCCACAAGGTTTGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GTRWLLEPQLCY*SEGTVPQGLEA Trigger: AGCTTCCAAACCTTGTGGAACTGTACCTTCACTCAAATAACATAGTTGTGGTTCCAGAAGCCATCGGGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032775.12 ENSMUST00000053950.10 ENSMUST00000190276.7 ENSMUST00000191035.8 |
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| CDS CAA 72 bp | GGGACCCGATGGCTTCTGGAACCACAACTATGTTATTaGAGTGAAGGTACCATCCAAGTGATGAAAACAACC | + |
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Preference number: 6 (lower is better) Translates to: GTRWLLEPQLCY*SEGTIQVMKTT Trigger: GGTTGTTTTCATCACTTGGATGGTACCTTCACTCAAATAACATAGTTGTGGTTCCAGAAGCCATCGGGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189836.2 |
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| CDS TCA 72 bp | CCGATGGCTTCTGGAACCACAACTATGTTATTTGAGTaGAGGTACCATCCAAGTGATGAAAACAACCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: PMASGTTTMLFE*RYHPSDENNPK Trigger: TTTGGGGTTGTTTTCATCACTTGGATGGTACCTTCACTCAAATAACATAGTTGTGGTTCCAGAAGCCATCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189836.2 |
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