Pregenerated sensors for LRRC27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015980Ensembl transcript IDs: ENSMUST00000016124.15, ENSMUST00000106104.8, ENSMUST00000135509.2, ENSMUST00000156768.8
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATaGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RELPASCHPGQSPHT*GTAAPRVEGTCHSC Trigger: GCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| 3UTR TCA 90 bp | CAGGAAGGAATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTaGAGACCCGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QEGIRSIKSHSLCGS*RPASYPRVVIQASP Trigger: GGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGATTCCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| 3UTR CAA 90 bp | GCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCGAGTaGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: AIACVAAEDPRVTRE*SSRPVPTHMGDSSS Trigger: GGAGCTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| 3UTR CCA 72 bp | AGTCCCCACACACATGGGGGACAGCAGCTCCTCGTGTaGAAGGTACTTGTCACTCCTGCTGACAGCGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SPHTHGGQQLLV*KVLVTPADSAA Trigger: GGCAGCGCTGTCAGCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGGGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| 3UTR CCA 72 bp | GGAGGAGTGGGAGGTTTCAGGGACATGTGCCTGATGTaGCCAGGATCCCTGATCCTGACAGGACAGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GGVGGFRDMCLM*PGSLILTGQGR Trigger: CCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATGTCCCTGAAACCTCCCACTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGAAGGAATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACCGAGTTACCCGCGAGTaGTCATCCAGGCCAGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: LRKESGLLKAIACVAAEDRVTRE*SSRPVP Trigger: GGGGACTGGCCTGGATGACAACTCGCGGGTAACTCG...GTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGATTCCTTCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| 3UTR TCA 72 bp | ATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTaGAGACCCGCGAGTTACCCGCGAGTTGTCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: IRSIKSHSLCGS*RPASYPRVVIQ Trigger: CTGGATGACAACTCGCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | CGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAAGCCTTCTCGGCCACTaGTTGGGGGCTGGTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RELPASCHPGQSPHTWGTSLLGH*LGAGVL Trigger: GAGGACACCAGCCCCCAAGCAGTGGCCGAGAAGGCT...TGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | CCGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACGGGAGCACGGGATACTaGAGGTCATTGCTGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: PRVTRELSSRPVPTHMGDGSTGY*RSLLPI Trigger: GATGGGCAGCAATGACCTTCAGTATCCCGTGCTCCC...GTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | CATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGAGCCTTCTCGGCCACTaGTTGGGGGCTGGTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: HVPDVARIPDPDRTGEGQSLLGH*LGAGVL Trigger: GAGGACACCAGCCCCCAAGCAGTGGCCGAGAAGGCT...CTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| 3UTR CAA 72 bp | TGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCGAGTaGTCATCCAGGCCAGTCCCCACACACATGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: CVAAEDPRVTRE*SSRPVPTHMGD Trigger: GTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCGGGTCTTCAGCTGCCACACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | CCGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACCCTGACTGCGGGCCATaGCTTCCTGTGCTTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PRVTRELSSRPVPTHMGDPDCGP*LPVLFL Trigger: GAGAAAAAGCACAGGAAGCCATGGCCCGCAGTCAGG...GTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | CGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACACCAGGAAACTTCGAGTaGGGATCTGCTGTGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RELPASCHPGQSPHTWGTPGNFE*GSAVCA Trigger: GGCACACACAGCAGATCCGCACTCGAAGTTTCCTGG...TGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | GTCCCCACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCGGGGAAGCTCTTGGTaGCGGCAGCAGCATCATCCT | + |
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Preference number: 4 (lower is better) Translates to: VPTHMGDSSSSCGRYLSLRGSSW*RQQHHP Trigger: AGGATGATGCTGCTGCCGCCACCAAGAGCTTCCCCG...GAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | ATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTGGGAGCACGGGATACTaGAGGTCATTGCTGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: MCLMWPGSLILTGQGRDSGSTGY*RSLLPI Trigger: GATGGGCAGCAATGACCTTCAGTATCCCGTGCTCCC...ACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR GCA 90 bp | CCCACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGCTCATGTGCTGGGTCTaGTCTCGCCACTCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PTHMGDSSSSCGRYLSLLLMCWV*SRHSCR Trigger: TCTGCAGGAGTGGCGAGAGCAGACCCAGCACATGAG...CAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | TTTCAGGGACATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGCGGGGAAGCTCTTGGTaGCGGCAGCAGCATCATCCT | + |
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Preference number: 4 (lower is better) Translates to: FQGHVPDVARIPDPDRTGRGSSW*RQQHHP Trigger: AGGATGATGCTGCTGCCGCCACCAAGAGCTTCCCCG...CCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATGTCCCTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | GAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCACTGTCCCCTCTCCGCTaGGCTTCACTTTCCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: ELPASCHPGQSPHTWGTALSPLR*ASLSQM Trigger: CATTTGGGAAAGTGAAGCCCAGCGGAGAGGGGACAG...TGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | TGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGCCCAACCATGAGGTTTaGGGCCCTGTGGTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CLMWPGSLILTGQGRDSKPNHEV*GPVVLW Trigger: CCACAGAACCACAGGGCCCCAAACCTCATGGTTGGG...CTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR TCA 90 bp | AGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGTGGCGCAGGCCTCTTTaGCTCAGGTCTAAAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SYPRVVIQASPHTHGGQQWRRPL*LRSKTG Trigger: ACCAGTTTTAGACCTGAGTCAAAGAGGCCTGCGCCA...CTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | GGACATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGAGCCCATCTTAGGTGCTaGGACTTCTGGAAGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: GHVPDVARIPDPDRTGEGAHLRC*DFWKQL Trigger: GAGTTGCTTCCAGAAGTCTCAGCACCTAAGATGGGC...TCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR TCA 90 bp | CCCACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGTGGGCAAGATGCCTTTaGAGGAGGTGGACCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PTHMGDSSSSCGRYLSLLWARCL*RRWTSS Trigger: GGAAGAGGTCCACCTCCTTCAAAGGCATCTTGCCCA...CAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | ACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGCTGGATCGGGGAAGCTCTTaGTGGCGGCAGCAGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: THMGDSSSSCGRYLSLLLDRGSS*WRQQHH Trigger: ATGATGCTGCTGCCGCCACCAAGAGCTTCCCCGATC...CAGCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | CGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACACCAGCCATGTCAGGTTaGGCAGCAGTTGGAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: RELPASCHPGQSPHTWGTPAMSG*AAVGRN Trigger: ATTTCTTCCAACTGCTGCCCAACCTGACATGGCTGG...TGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | AGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGTGTGTTTTGGTACCCTaGAGGGAGGTTGGGCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SYPRVVIQASPHTHGGQQCVLVP*REVGQD Trigger: ATCTTGCCCAACCTCCCTTCAGGGTACCAAAACACA...CTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | AGTCCCCACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTGCCCATCTTAGGTGCTaGGACTTCTGGAAGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: SPHTHGGQQLLVWKVLVTAHLRC*DFWKQL Trigger: GAGTTGCTTCCAGAAGTCTCAGCACCTAAGATGGGC...AGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | ACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGCTGGCTACCAAGCCTTTCTaGACAATCAGGCGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: THMGDSSSSCGRYLSLLLATKPF*TIRRGG Trigger: TCCTCCTCGCCTGATTGTGCAGAAAGGCTTGGTAGC...CAGCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | CCCACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGGATCATCACCCTCTCTaGAAAAGTGATCGGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PTHMGDSSSSCGRYLSLLDHHPL*KSDRGS Trigger: GCTTCCCCGATCACTTTTCCAGAGAGGGTGATGATC...CAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | GAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAAAGAGCTTCTTCTCTTaGATCTCCACCTGCTCATTC | + |
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Preference number: 4 (lower is better) Translates to: ELPASCHPGQSPHTWGTAKSFFS*ISTCSF Trigger: GAATGAGCAGGTGGAGATTCAAGAGAAGAAGCTCTT...TGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | AGTCCCCACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTTTCTCCACAATCTCCTaGCTCAGCTTCCAGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: SPHTHGGQQLLVWKVLVTFSTIS*LSFQKR Trigger: ACGCTTCTGGAAGCTGAGGCAGGAGATTGTGGAGAA...AGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | TGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGAAAAACTATGATCGGGGAAGCTCTTaGTGGCGGCAGCAGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: WPGSLILTGQGRDSKKNYDRGSS*WRQQHH Trigger: ATGATGCTGCTGCCGCCACCAAGAGCTTCCCCGATC...ATAGTTTTTCTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | CCGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGAGCCAATCCCAGATaGAAGAACCTTGATTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PRVTRELSSRPVPTHMGDRANPR*KNLDFV Trigger: AACAAAATCAAGGTTCTTCCATCTGGGATTGGCTCT...GTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | GAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGTTTTCAAATGTTTGTaGGAGCCAATCCCAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: ELPASCHPGQSPHTWGTAVFKCL*EPIPDG Trigger: TCCATCTGGGATTGGCTCTCACAAACATTTGAAAAC...TGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | ATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGCTGACAGCGTCCATCCTGTTTGCATaGACTGTGTTTTGGTACCCT | + |
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Preference number: 4 (lower is better) Translates to: MGDSSSSCGRYLSLLLTASILFA*TVFWYP Trigger: AGGGTACCAAAACACAGTTCATGCAAACAGGATGGA...CGCTGTCAGCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | AGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGTTCCTTAACTCCTCCTaGAGTTTCTTAGTGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SYPRVVIQASPHTHGGQQFLNSS*SFLVVS Trigger: GGAAACCACTAAGAAACTTCAGGAGGAGTTAAGGAA...CTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | AGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGGTGAAAGGTTTCCAGTaGAAGATGGAAATGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: SYPRVVIQASPHTHGGQQVKGFQ*KMEMDG Trigger: ACCATCCATTTCCATCTTTCACTGGAAACCTTTCAC...CTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | GCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCGAGTTGTCATCCTTACTATGTGGAGGTTaGAGTTTACTGAGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: AIACVAAEDPRVTRELSSLLCGG*SLLSSL Trigger: GAGGGAACTCAGTAAACTCCAACCTCCACATAGTAA...GGATGACAACTCGCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | CGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACACTTCACTTTCCCAAATaGACTTACTGGCATTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RELPASCHPGQSPHTWGTLHFPK*TYWHFL Trigger: GAGAAAATGCCAGTAAGTCCATTTGGGAAAGTGAAG...TGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | GTCCCCACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCGTGAGGAAGAAAAGATaGCCCCTTCAAAGTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: VPTHMGDSSSSCGRYLSLVRKKR*PLQSPF Trigger: AAATGGACTTTGAAGGGGTCATCTTTTCTTCCTCAC...GAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | TGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGAAAAACTATTGGCGCAGGCCTCTTTaGCTCAGGTCTAAAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: WPGSLILTGQGRDSKKNYWRRPL*LRSKTG Trigger: ACCAGTTTTAGACCTGAGTCAAAGAGGCCTGCGCCA...ATAGTTTTTCTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR TCA 90 bp | GGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCTGCTGGTGGGTGAAGTaGAAGGTTTCCAGTGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GLLKAIACVAAEDPRVTRCWWVK*KVSSER Trigger: TCTTTCACTGGAAACCTTTCACTTCACCCACCAGCA...GCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | ACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGCTGCTGAGCAAATTCCTCTaGAGGTGTAATTGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: THMGDSSSSCGRYLSLLLLSKFL*RCNCWR Trigger: CCTCCAACAATTACACCTGCAGAGGAATTTGCTCAG...CAGCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | TTTCAGGGACATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGCTGAGCAAATTCCTCTaGAGGTGTAATTGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FQGHVPDVARIPDPDRTGLSKFL*RCNCWR Trigger: CCTCCAACAATTACACCTGCAGAGGAATTTGCTCAG...CCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATGTCCCTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | CCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGAAAAACTATAACCGCTGCCTTGAGATTTaGCGGCAGCTCAACAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PGSLILTGQGRDSKKNYNRCLEI*RQLNSQ Trigger: TTGGCTGTTGAGCTGCCGCCAAATCTCAAGGCAGCG...GTTATAGTTTTTCTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | CGCGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAAGTGAAAGATGGAAATaGATGGTCTTTGTTCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: RELPASCHPGQSPHTWGTSERWK*MVFVQG Trigger: ACCTTGAACAAAGACCATCCATTTCCATCTTTCACT...TGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | TGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGAAAAACTATTTCTCCACAATCTCCTaGCTCAGCTTCCAGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: WPGSLILTGQGRDSKKNYFSTIS*LSFQKR Trigger: ACGCTTCTGGAAGCTGAGGCAGGAGATTGTGGAGAA...ATAGTTTTTCTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | CATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTGCAGGTGTAATTGTTaGAGGTTGGGAATTTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: HVPDVARIPDPDRTGEGQCRCNC*RLGILK Trigger: CTTTAAAATTCCCAACCTCCAACAATTACACCTGCA...CTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | AGCCTCAGGAAGGAATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAACGCTGCCTTGAGATTTaGCGGCAGCTCAACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRKESGLLKAIACVAAERCLEI*RQLNSQ Trigger: TTGGCTGTTGAGCTGCCGCCAAATCTCAAGGCAGCG...TTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGATTCCTTCCTGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | GTCCCCACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCGTTTCCAGTGAAAGATaGAAATGGATGGTCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPTHMGDSSSSCGRYLSLVSSER*KWMVFV Trigger: AACAAAGACCATCCATTTCCATCTTTCACTGGAAAC...GAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGTGGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR TCA 90 bp | TGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGAAAAACTATTCCATCCTGTTTGCATaGACTGTGTTTTGGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPGSLILTGQGRDSKKNYSILFA*TVFWYP Trigger: AGGGTACCAAAACACAGTTCATGCAAACAGGATGGA...ATAGTTTTTCTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | GGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCCATCATGTTACTATGTaGAGGTTGGAGTTTACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLKAIACVAAEDPRVTRHHVTM*RLEFTE Trigger: CTCAGTAAACTCCAACCTCCACATAGTAACATGATG...GCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | GGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCCCCAAATGGACTTACTaGCATTTTCTCATAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLKAIACVAAEDPRVTRPKWTY*HFLIVC Trigger: ACAGACTATGAGAAAATGCCAGTAAGTCCATTTGGG...GCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | CTCAGGAAGGAATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACGGCCATGGCTTCCTGTaGTTTTTCTCCTTGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRKESGLLKAIACVAAEDGHGFL*FFSLTF Trigger: AAACGTCAAGGAGAAAAAGCACAGGAAGCCATGGCC...GTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGATTCCTTCCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR GCA 90 bp | AAGGGAAAGAAGAGGAAGTCAAAGGCAGCATGTGGGATATGGCTAGGAAGCTCAGGCCATGGCTTCCTGTaGTTTTTCTCCTTGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGKKRKSKAACGIWLGSSGHGFL*FFSLTF Trigger: AAACGTCAAGGAGAAAAAGCACAGGAAGCCATGGCC...TGAGCTTCCTAGCCATATCCCACATGCTGCCTTTGACTTCCTCTTCTTTCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | GGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCTGCAGGTGTAATTGTTaGAGGTTGGGAATTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLKAIACVAAEDPRVTRCRCNC*RLGILK Trigger: CTTTAAAATTCCCAACCTCCAACAATTACACCTGCA...GCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | AGCCTCAGGAAGGAATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGTGGTTTCCAGGTCCTaGTTGGCTGTCTTAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKESGLLKAIACVAAEVVSRS*LAVLMS Trigger: AGACATTAAGACAGCCAACCAGGACCTGGAAACCAC...TTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGATTCCTTCCTGAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | GGAGGGACAGTAAGAAAAACTATAACTAAAAGGGAAAGAAGAGGAAGTCAAAGGCCTGACTGCGGGCCATaGCTTCCTGTGCTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGTVRKTITKRERRGSQRPDCGP*LPVLFL Trigger: GAGAAAAAGCACAGGAAGCCATGGCCCGCAGTCAGG...CCTTTGACTTCCTCTTCTTTCCCTTTTAGTTATAGTTTTTCTTACTGTCCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | AAAACTATAACTAAAAGGGAAAGAAGAGGAAGTCAAAGGCAGCATGTGGGATATACTGGGATCCCCCACTaGCCAAACCCAACCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTITKRERRGSQRQHVGYTGIPH*PNPTMR Trigger: CCTCATGGTTGGGTTTGGCCAGTGGGGGATCCCAGT...ATATCCCACATGCTGCCTTTGACTTCCTCTTCTTTCCCTTTTAGTTATAGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | AGCCTCAGGAAGGAATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAACTTAATGTCTTGCATTaGGTTTGTACCCAGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKESGLLKAIACVAAELNVLH*VCTQET Trigger: AGTTTCCTGGGTACAAACCCAATGCAAGACATTAAG...TTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGATTCCTTCCTGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGAAAAACTATAACTAAAAGGGAAAGAAGAGGAAGTCAAAGGCAGCATGGCCCTGTGGTTCTGTaGATGTGGTCCATACCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVRKTITKRERRGSQRQHGPVVL*MWSIPA Trigger: AGCCGGTATGGACCACATCCACAGAACCACAGGGCC...ATGCTGCCTTTGACTTCCTCTTCTTTCCCTTTTAGTTATAGTTTTTCTTACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | AAAACTATAACTAAAAGGGAAAGAAGAGGAAGTCAAAGGCAGCATGTGGGATATCCAGCCATGTCAGGTTaGGCAGCAGTTGGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTITKRERRGSQRQHVGYPAMSG*AAVGRN Trigger: ATTTCTTCCAACTGCTGCCCAACCTGACATGGCTGG...ATATCCCACATGCTGCCTTTGACTTCCTCTTCTTTCCCTTTTAGTTATAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR TCA 90 bp | GGAGGGACAGTAAGAAAAACTATAACTAAAAGGGAAAGAAGAGGAAGTCAAAGGAAGAGCTTCTTCTCTTaGATCTCCACCTGCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GGTVRKTITKRERRGSQRKSFFS*ISTCSF Trigger: GAATGAGCAGGTGGAGATTCAAGAGAAGAAGCTCTT...CCTTTGACTTCCTCTTCTTTCCCTTTTAGTTATAGTTTTTCTTACTGTCCCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR TCA 90 bp | ACAGTAAGAAAAACTATAACTAAAAGGGAAAGAAGAGGAAGTCAAAGGCAGCATGTGAGGAAGAAAAGATaGCCCCTTCAAAGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVRKTITKRERRGSQRQHVRKKR*PLQSPF Trigger: AAATGGACTTTGAAGGGGTCATCTTTTCTTCCTCAC...ATGCTGCCTTTGACTTCCTCTTCTTTCCCTTTTAGTTATAGTTTTTCTTACTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGAAAAACTATAACTAAAAGGGAAAGAAGAGGAAGTCAAAGGCAGCATAGAGCCAATCCCAGATaGAAGAACCTTGATTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVRKTITKRERRGSQRQHRANPR*KNLDFV Trigger: AACAAAATCAAGGTTCTTCCATCTGGGATTGGCTCT...ATGCTGCCTTTGACTTCCTCTTCTTTCCCTTTTAGTTATAGTTTTTCTTACTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CCA 90 bp | GGGATCCCCCACTGGCCAAACCCAACCATGAGGTTTGGGGCCCTGTaGTTCTGTGGATGTGGTCCATACCGGCTGGCTGGAGGGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GIPHWPNPTMRFGAL*FCGCGPYRLAGGCP Trigger: TGGGCACCCTCCAGCCAGCCGGTATGGACCACATCCACAGAACCACAGGGCCCCAAACCTCATGGTTGGGTTTGGCCAGTGGGGGATCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | GTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGCCTTCTCGGCCACTGCTaGGGGGCTGGTGTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VTRELSSRPVPTHMGDSSLLGHC*GAGVLH Trigger: ATGGAGGACACCAGCCCCCAAGCAGTGGCCGAGAAG...GCTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | TGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGCTTCTCGGCCACTGCTaGGGGGCTGGTGTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLMWPGSLILTGQGRDSKLLGHC*GAGVLH Trigger: ATGGAGGACACCAGCCCCCAAGCAGTGGCCGAGAAG...CTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CCA 90 bp | GCCAAACCCAACCATGAGGTTTGGGGCCCTGTGGTTCTGTGGATGTaGTCCATACCGGCTGGCTGGAGGGTGCCCATAACAGGACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKPNHEVWGPVVLWM*SIPAGWRVPITGHS Trigger: GCTGTGTCCTGTTATGGGCACCCTCCAGCCAGCCGGTATGGACCACATCCACAGAACCACAGGGCCCCAAACCTCATGGTTGGGTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CCA 90 bp | CCACTGGCCAAACCCAACCATGAGGTTTGGGGCCCTGTGGTTCTGTaGATGTGGTCCATACCGGCTGGCTGGAGGGTGCCCATAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLAKPNHEVWGPVVL*MWSIPAGWRVPITG Trigger: TCCTGTTATGGGCACCCTCCAGCCAGCCGGTATGGACCACATCCACAGAACCACAGGGCCCCAAACCTCATGGTTGGGTTTGGCCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CCA 90 bp | CAAATCCACTGGGATCCCCCACTGGCCAAACCCAACCATGAGGTTTaGGGCCCTGTGGTTCTGTGGATGTGGTCCATACCGGCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QIHWDPPLAKPNHEV*GPVVLWMWSIPAGW Trigger: CCAGCCAGCCGGTATGGACCACATCCACAGAACCACAGGGCCCCAAACCTCATGGTTGGGTTTGGCCAGTGGGGGATCCCAGTGGATTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | AGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGCACTGTCTCCTTCTCTaGGAGCTCCTGAAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SYPRVVIQASPHTHGGQQHCLLL*ELLKSR Trigger: GCGGCTCTTCAGGAGCTCCAAGAGAAGGAGACAGTG...CTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | GGACATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACACTGTCTCCTTCTCTaGGAGCTCCTGAAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GHVPDVARIPDPDRTGEGHCLLL*ELLKSR Trigger: GCGGCTCTTCAGGAGCTCCAAGAGAAGGAGACAGTG...TCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | GCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCGAGTTGTCATCCTCCTGCAGAGCTCTCTaGTCTCTCCTCCGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIACVAAEDPRVTRELSSSCRAL*SLLRCS Trigger: GGAGCAACGGAGGAGAGACAAGAGAGCTCTGCAGGA...GGATGACAACTCGCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS TCA 90 bp | GTGCGTACAAATCCACTGGGATCCCCCACTGGCCAAACCCAACCATaGGGTTTGGGGCCCTGTGGTTCTGTGGATGTGGTCCATACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRTNPLGSPTGQTQP*GLGPCGSVDVVHTG Trigger: GCCGGTATGGACCACATCCACAGAACCACAGGGCCCCAAACCTCATGGTTGGGTTTGGCCAGTGGGGGATCCCAGTGGATTTGTACGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | CGAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCTTGGGCAAGATGCCTTaGAAGGAGGTGGACCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVTRELSSRPVPTHMGDSLGKMP*KEVDLF Trigger: GAAGAGGTCCACCTCCTTCAAAGGCATCTTGCCCAA...GCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | ATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGCTGACAGCGCTTGTCTCTCCTCCGTaGCTCCAGCACTGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MGDSSSSCGRYLSLLLTALVSPP*LQHCLL Trigger: AAGGAGACAGTGCTGGAGCAACGGAGGAGAGACAAG...CGCTGTCAGCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 90 bp | TGTGGAGGTTGGAGTTTACTGAGTTCCCTCCTGGTCCTCATGTGCTaGGTCTGCTCTCGCCACTCCTGCAGAGCTCTCTTGTCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CGGWSLLSSLLVLMC*VCSRHSCRALLSLL Trigger: GAGGAGAGACAAGAGAGCTCTGCAGGAGTGGCGAGAGCAGACCCAGCACATGAGGACCAGGAGGGAACTCAGTAAACTCCAACCTCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | ATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGCTGACAGCGCAGGTTGGGCAGCAGTaGGAAGAAATCCTCCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: MGDSSSSCGRYLSLLLTAQVGQQ*EEILRN Trigger: ATTCCGGAGGATTTCTTCCAACTGCTGCCCAACCTG...CGCTGTCAGCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | TGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGCAGGTTGGGCAGCAGTaGGAAGAAATCCTCCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CLMWPGSLILTGQGRDSKQVGQQ*EEILRN Trigger: ATTCCGGAGGATTTCTTCCAACTGCTGCCCAACCTG...CTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | GGACATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACTGTGCTTTTTCTCCTaGACGTTTAGCGCTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHVPDVARIPDPDRTGEGLCFFS*TFSAAL Trigger: CAAGGCAGCGCTAAACGTCAAGGAGAAAAAGCACAG...TCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | TTTCAGGGACATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGAGTAGAGCTCCTCCGTaGCTCCAGCACTGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FQGHVPDVARIPDPDRTGSRAPP*LQHCLL Trigger: AAGGAGACAGTGCTGGAGCAACGGAGGAGCTCTACT...CCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATGTCCCTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS TCA 90 bp | CATCTCCAGGGAAGGCCTTCTCCACTGAGCAGATGCGTAGGAAGGTaGGGATGGCTACCAAGCCTTTCTGCACAATCAGGCGAGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLQGRPSPLSRCVGR*GWLPSLSAQSGEEE Trigger: TTCCTCCTCGCCTGATTGTGCAGAAAGGCTTGGTAGCCATCCTCACCTTCCTACGCATCTGCTCAGTGGAGAAGGCCTTCCCTGGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS TCA 90 bp | CCTGCTCATTCTCCACAATCTCCTGCCTCAGCTTCCAGAAGCGTCTaGTCTCCTCCTTACTGGGCCATATCTCGGAGGCGGCGTTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: PAHSPQSPASASRSV*SPPYWAISRRRRWI Trigger: AATCCAACGCCGCCTCCGAGATATGGCCCAGTAAGGAGGAGATCAGACGCTTCTGGAAGCTGAGGCAGGAGATTGTGGAGAATGAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS GCA 90 bp | CTATGTGGAGGTTGGAGTTTACTGAGTTCCCTCCTGGTCCTCATGTaGTGGGTCTGCTCTCGCCACTCCTGCAGAGCTCTCTTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCGGWSLLSSLLVLM*WVCSRHSCRALLSL Trigger: GAGAGACAAGAGAGCTCTGCAGGAGTGGCGAGAGCAGACCCAGCACATGAGGACCAGGAGGGAACTCAGTAAACTCCAACCTCCACATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 90 bp | AAATTCCTCTGCAGGTGTAATTGCATTGTGCTGCCTTCCTACTCTTaGCAGCCACTGGCAGCTTCCCCCTGTCAGGGTGTCACTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KFLCRCNCIVLPSYS*QPLAASPCQGVTAP Trigger: GGGAGCAGTGACACCCTGACAGGGGGAAGCTGCCAGTGGCTGCCAAGAGTAGGAAGGCAGCACAATGCAATTACACCTGCAGAGGAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135509.2 |
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| CDS-3UTR CAA 90 bp | TGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGAGATCTTTAGCAGCCTaGGGGTCTTTAGCAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLMWPGSLILTGQGRDSKRSLAA*GSLAAF Trigger: GAAGGCTGCTAAAGACCCCAAGGCTGCTAAAGATCT...CTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | GTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCAGCGTTACTATGTGGAGGTaGGAGTTTACTGAGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VTRELSSRPVPTHMGDSSVTMWR*EFTEFP Trigger: AGGGAACTCAGTAAACTCCAACCTCCACATAGTAAC...GCTGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS TCA 90 bp | AGGGAGCACGGGATACTGAAGGTCATTGCTGCCCATCTTAGGTGCTaGGACTTCTGGAAGCAACTCATCTCCAGGGAAGGCCTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: REHGILKVIAAHLRC*DFWKQLISREGLLH Trigger: GTGGAGAAGGCCTTCCCTGGAGATGAGTTGCTTCCAGAAGTCTCAGCACCTAAGATGGGCAGCAATGACCTTCAGTATCCCGTGCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | AAAGCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCGAGTTGTCAAGATCTTTAGCAGCCTaGGGGTCTTTAGCAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAIACVAAEDPRVTRELSRSLAA*GSLAAF Trigger: GAAGGCTGCTAAAGACCCCAAGGCTGCTAAAGATCT...TGACAACTCGCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | ACACACATGGGGGACAGCAGCTCCTCGTGTGGAAGGTACTTGTCACTCCTGCTGGCAGCAGCATCATCCTaGAGATCTTTAGCAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: THMGDSSSSCGRYLSLLLAAASS*RSLAAL Trigger: CAAGGCTGCTAAAGATCTCAAGGATGATGCTGCTGC...CAGCAGGAGTGACAAGTACCTTCCACACGAGGAGCTGCTGTCCCCCATGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | GGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCTCCAGCCATGTCAGGTaGGGCAGCAGTTGGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLLKAIACVAAEDPRVTRSSHVR*GSSWKK Trigger: TTTCTTCCAACTGCTGCCCAACCTGACATGGCTGGA...GCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS GCA 90 bp | CATGAACTGTGTTTTGGTACCCTGACTGCGGGCCATGGCTTCCTGTaGTTTTTCTCCTTGACGTTTAGCGCTGCCTTGAGATTTGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HELCFGTLTAGHGFL*FFSLTFSAALRFGG Trigger: GCCGCCAAATCTCAAGGCAGCGCTAAACGTCAAGGAGAAAAAGCACAGGAAGCCATGGCCCGCAGTCAGGGTACCAAAACACAGTTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | GAGTTACCCGCGAGTTGTCATCCAGGCCAGTCCCCACACACATGGGGGACAGCATGTCTTCCATCCTGTTaGCATGAACTGTGTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ELPASCHPGQSPHTWGTACLPSC*HELCFG Trigger: ACCAAAACACAGTTCATGCAAACAGGATGGAAGACA...TGCTGTCCCCCATGTGTGTGGGGACTGGCCTGGATGACAACTCGCGGGTAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | AAGGGAAAGAAGAGGAAGTCAAAGGCAGCATGTGGGATATGGCTAGGAAGCTCACAGGACACAGCTGGGTaGCCAGTAGAGCTCCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KGKKRKSKAACGIWLGSSQDTAG*PVELLR Trigger: ACGGAGGAGCTCTACTGGCAACCCAGCTGTGTCCTG...TGAGCTTCCTAGCCATATCCCACATGCTGCCTTTGACTTCCTCTTCTTTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CCA 90 bp | GTGGCAAAGGGAATCTTCGATGCCATCATGTTACTATGTGGAGGTTaGAGTTTACTGAGTTCCCTCCTGGTCCTCATGTGCTGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAKGIFDAIMLLCGG*SLLSSLLVLMCWVC Trigger: GCAGACCCAGCACATGAGGACCAGGAGGGAACTCAGTAAACTCCAACCTCCACATAGTAACATGATGGCATCGAAGATTCCCTTTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | CCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGAAAAACTATAACTCCAGCCATGTCAGGTaGGGCAGCAGTTGGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGSLILTGQGRDSKKNYNSSHVR*GSSWKK Trigger: TTTCTTCCAACTGCTGCCCAACCTGACATGGCTGGA...GTTATAGTTTTTCTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS-3UTR CAA 90 bp | CATGTGCCTGATGTGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTCAACGGGTAACATTTaGATAGGATTTCGTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HVPDVARIPDPDRTGEGQSTGNI*IGFRSR Trigger: TCTAGAACGAAATCCTATCAAAATGTTACCCGTTGA...CTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCACATCAGGCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CCA 90 bp | AGGCCTTTGTGCTGTCCCCTCTCCGCTGGGCTTCACTTTCCCAAATaGACTTACTGGCATTTTCTCATAGTCTGTCAGATCTGTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPLCCPLSAGLHFPK*TYWHFLIVCQICGK Trigger: TTTGCCACAGATCTGACAGACTATGAGAAAATGCCAGTAAGTCCATTTGGGAAAGTGAAGCCCAGCGGAGAGGGGACAGCACAAAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 90 bp | CAGATCTGTGGCAAAGGGAATCTTCGATGCCATCATGTTACTATGTaGAGGTTGGAGTTTACTGAGTTCCCTCCTGGTCCTCATGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QICGKGNLRCHHVTM*RLEFTEFPPGPHVL Trigger: CAGCACATGAGGACCAGGAGGGAACTCAGTAAACTCCAACCTCCACATAGTAACATGATGGCATCGAAGATTCCCTTTGCCACAGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 90 bp | TGCTGTCCCCTCTCCGCTGGGCTTCACTTTCCCAAATGGACTTACTaGCATTTTCTCATAGTCTGTCAGATCTGTGGCAAAGGGAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: CCPLSAGLHFPKWTY*HFLIVCQICGKGNL Trigger: AAGATTCCCTTTGCCACAGATCTGACAGACTATGAGAAAATGCCAGTAAGTCCATTTGGGAAAGTGAAGCCCAGCGGAGAGGGGACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | CTCAGGAAGGAATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACCTGTGCTTTTTCTCCTaGACGTTTAGCGCTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRKESGLLKAIACVAAEDLCFFS*TFSAAL Trigger: CAAGGCAGCGCTAAACGTCAAGGAGAAAAAGCACAG...GTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGATTCCTTCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | AGCCTCAGGAAGGAATCAGGTCTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGTTTCCAGGTCCTGGTaGGCTGTCTTAATGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRKESGLLKAIACVAAEVSRSW*AVLMSC Trigger: GCAAGACATTAAGACAGCCAACCAGGACCTGGAAAC...TTCAGCTGCCACACAGGCTATGGCTTTTAATAGACCTGATTCCTTCCTGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS GCA 90 bp | AGTTTCTTAGTGGTTTCCAGGTCCTGGTTGGCTGTCTTAATGTCTTaGATTGGGTTTGTACCCAGGAAACTTCGAGTGCGGATCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFLVVSRSWLAVLMS*IGFVPRKLRVRICC Trigger: ACAGCAGATCCGCACTCGAAGTTTCCTGGGTACAAACCCAATGCAAGACATTAAGACAGCCAACCAGGACCTGGAAACCACTAAGAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | CTATTAAAAGCCATAGCCTGTGTGGCAGCTGAAGACCCGCGAGTTACCCGCGAGTCAACGGGTAACATTTaGATAGGATTTCGTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLKAIACVAAEDPRVTRESTGNI*IGFRSR Trigger: TCTAGAACGAAATCCTATCAAAATGTTACCCGTTGA...CTCGCGGGTAACTCGCGGGTCTTCAGCTGCCACACAGGCTATGGCTTTTAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS-3UTR CAA 90 bp | TGGCCAGGATCCCTGATCCTGACAGGACAGGGGAGGGACAGTAAGAAAAACTATTGTCTTCCATCCTGTTaGCATGAACTGTGTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WPGSLILTGQGRDSKKNYCLPSC*HELCFG Trigger: ACCAAAACACAGTTCATGCAAACAGGATGGAAGACA...ATAGTTTTTCTTACTGTCCCTCCCCTGTCCTGTCAGGATCAGGGATCCTGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS TCA 90 bp | AAGTTTTCAAATGTTTGTGAGAGCCAATCCCAGATGGAAGAACCTTaGTTTTGTTGTAACGGAGGTCCAGCCATGTCAGGTTGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KFSNVCESQSQMEEP*FCCNGGPAMSGWAA Trigger: TGCTGCCCAACCTGACATGGCTGGACCTCCGTTACAACAAAATCAAGGTTCTTCCATCTGGGATTGGCTCTCACAAACATTTGAAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000135509.2 |
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| CDS GCA 90 bp | AGCAGTTGGAAGAAATCCTCCGGAATCTCCCTGAGCAAATTCCTCTaGAGGTGTAATTGTTGGAGGTTGGGAATTTTAAAGAACTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSWKKSSGISLSKFL*RCNCWRLGILKNFP Trigger: GGGAAAGTTCTTTAAAATTCCCAACCTCCAACAATTACACCTGCAGAGGAATTTGCTCAGGGAGATTCCGGAGGATTTCTTCCAACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000156768.8 |
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| CDS TCA 90 bp | TCTTTGTTCAAGGTCATCTCCACTTTCAGTTTCCTTAACTCCTCCTaGAGTTTCTTAGTGGTTTCCAGGTCCTGGTTGGCTGTCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLFKVISTFSFLNSS*SFLVVSRSWLAVLM Trigger: CATTAAGACAGCCAACCAGGACCTGGAAACCACTAAGAAACTTCAGGAGGAGTTAAGGAAACTGAAAGTGGAGATGACCTTGAACAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS TCA 90 bp | TATTTTGAGGCTGTGATGCTGGTGGGTGAAGTGAAAGGTTTCCAGTaGAAGATGGAAATGGATGGTCTTTGTTCAAGGTCATCTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: YFEAVMLVGEVKGFQ*KMEMDGLCSRSSPL Trigger: AAGTGGAGATGACCTTGAACAAAGACCATCCATTTCCATCTTTCACTGGAAACCTTTCACTTCACCCACCAGCATCACAGCCTCAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS GCA 90 bp | CATTTTCTCATAGTCTGTCAGATCTGTGGCAAAGGGAATCTTCGATaGCATCATGTTACTATGTGGAGGTTGGAGTTTACTGAGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HFLIVCQICGKGNLR*HHVTMWRLEFTEFP Trigger: AGGGAACTCAGTAAACTCCAACCTCCACATAGTAACATGATGGCATCGAAGATTCCCTTTGCCACAGATCTGACAGACTATGAGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 90 bp | TCCCAAATGGACTTACTGGCATTTTCTCATAGTCTGTCAGATCTGTaGCAAAGGGAATCTTCGATGCCATCATGTTACTATGTGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SQMDLLAFSHSLSDL*QRESSMPSCYYVEV Trigger: AACCTCCACATAGTAACATGATGGCATCGAAGATTCCCTTTGCCACAGATCTGACAGACTATGAGAAAATGCCAGTAAGTCCATTTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 72 bp | CCTGTGGTTCTGTGGATGTGGTCCATACCGGCTGGCTaGAGGGTGCCCATAACAGGACACAGCTGGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVVLWMWSIPAG*RVPITGHSWVA Trigger: GGCAACCCAGCTGTGTCCTGTTATGGGCACCCTCCAGCCAGCCGGTATGGACCACATCCACAGAACCACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CCA 72 bp | AAACCCAACCATGAGGTTTGGGGCCCTGTGGTTCTGTaGATGTGGTCCATACCGGCTGGCTGGAGGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KPNHEVWGPVVL*MWSIPAGWRVP Trigger: GGGCACCCTCCAGCCAGCCGGTATGGACCACATCCACAGAACCACAGGGCCCCAAACCTCATGGTTGGGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CAA 72 bp | TGCTGGGTCTGCTCTCGCCACTCCTGCAGAGCTCTCTaGTCTCTCCTCCGTTGCTCCAGCACTGTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CWVCSRHSCRAL*SLLRCSSTVSF Trigger: GAAGGAGACAGTGCTGGAGCAACGGAGGAGAGACAAGAGAGCTCTGCAGGAGTGGCGAGAGCAGACCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 90 bp | GTCCTCATGTGCTGGGTCTGCTCTCGCCACTCCTGCAGAGCTCTCTaGTCTCTCCTCCGTTGCTCCAGCACTGTCTCCTTCTCTTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLMCWVCSRHSCRAL*SLLRCSSTVSFSWS Trigger: GCTCCAAGAGAAGGAGACAGTGCTGGAGCAACGGAGGAGAGACAAGAGAGCTCTGCAGGAGTGGCGAGAGCAGACCCAGCACATGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 90 bp | GTGCCCATAACAGGACACAGCTGGGTTGCCAGTAGAGCTCCTCCGTaGCTCCAGCACTGTCTCCTTCTCTTGGAGCTCCTGAAGAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VPITGHSWVASRAPP*LQHCLLLLELLKSR Trigger: GCGGCTCTTCAGGAGCTCCAAGAGAAGGAGACAGTGCTGGAGCAACGGAGGAGCTCTACTGGCAACCCAGCTGTGTCCTGTTATGGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS TCA 72 bp | AATCCACTGGGATCCCCCACTGGCCAAACCCAACCATaGGGTTTGGGGCCCTGTGGTTCTGTGGATGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NPLGSPTGQTQP*GLGPCGSVDVV Trigger: GACCACATCCACAGAACCACAGGGCCCCAAACCTCATGGTTGGGTTTGGCCAGTGGGGGATCCCAGTGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CCA 72 bp | AACCATGAGGTTTGGGGCCCTGTGGTTCTGTGGATGTaGTCCATACCGGCTGGCTGGAGGGTGCCCATAACA | + |
|
Preference number: 6 (lower is better) Translates to: NHEVWGPVVLWM*SIPAGWRVPIT Trigger: TGTTATGGGCACCCTCCAGCCAGCCGGTATGGACCACATCCACAGAACCACAGGGCCCCAAACCTCATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CAA 90 bp | AAGCGTCTGATCTCCTCCTTACTGGGCCATATCTCGGAGGCGGCGTaGGATTTGCGGAGCTCACTCAGGTCTAGCCTTTCCATAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KRLISSLLGHISEAA*DLRSSLRSSLSIGG Trigger: CCCACCTATGGAAAGGCTAGACCTGAGTGAGCTCCGCAAATCCAACGCCGCCTCCGAGATATGGCCCAGTAAGGAGGAGATCAGACGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS TCA 72 bp | TCTCCACAATCTCCTGCCTCAGCTTCCAGAAGCGTCTaGTCTCCTCCTTACTGGGCCATATCTCGGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPQSPASASRSV*SPPYWAISRRR Trigger: CCGCCTCCGAGATATGGCCCAGTAAGGAGGAGATCAGACGCTTCTGGAAGCTGAGGCAGGAGATTGTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS GCA 72 bp | GCAGCCACTGGCAGCTTCCCCCTGTCAGGGTGTCACTaGTCCCAACTCTACGGATCCCATCTTCCTGATATA | + |
|
Preference number: 6 (lower is better) Translates to: AATGSFPLSGCH*SQLYGSHLPDI Trigger: TATATCAGGAAGATGGGATCCGTAGAGTTGGGAGCAGTGACACCCTGACAGGGGGAAGCTGCCAGTGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135509.2 |
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| CDS CCA 72 bp | TCTCCTCCTTACTGGGCCATATCTCGGAGGCGGCGTTaGATTTGCGGAGCTCACTCAGGTCTAGCCTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPYWAISRRRR*ICGAHSGLAFP Trigger: TGGAAAGGCTAGACCTGAGTGAGCTCCGCAAATCCAACGCCGCCTCCGAGATATGGCCCAGTAAGGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS CCA 72 bp | TTAACCTGTGCGTACAAATCCACTGGGATCCCCCACTaGCCAAACCCAACCATGAGGTTTGGGGCCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LTCAYKSTGIPH*PNPTMRFGALW Trigger: CCACAGGGCCCCAAACCTCATGGTTGGGTTTGGCCAGTGGGGGATCCCAGTGGATTTGTACGCACAGGTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CAA 72 bp | GCGGCAGCAGCATCATCCTTGAGATCTTTAGCAGCCTaGGGGTCTTTAGCAGCCTTCTCGGCCACTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAAASSLRSLAA*GSLAAFSATAW Trigger: CCAAGCAGTGGCCGAGAAGGCTGCTAAAGACCCCAAGGCTGCTAAAGATCTCAAGGATGATGCTGCTGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000135509.2 ENSMUST00000156768.8 |
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| CDS CAA 72 bp | TCGGGGAAGCTCTTGGTGGCGGCAGCAGCATCATCCTaGAGATCTTTAGCAGCCTTGGGGTCTTTAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGKLLVAAAASS*RSLAALGSLAA Trigger: GGCTGCTAAAGACCCCAAGGCTGCTAAAGATCTCAAGGATGATGCTGCTGCCGCCACCAAGAGCTTCCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000135509.2 ENSMUST00000156768.8 |
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| CDS CAA 72 bp | ATCTCCTCCTTACTGGGCCATATCTCGGAGGCGGCGTaGGATTTGCGGAGCTCACTCAGGTCTAGCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISSLLGHISEAA*DLRSSLRSSLS Trigger: GGAAAGGCTAGACCTGAGTGAGCTCCGCAAATCCAACGCCGCCTCCGAGATATGGCCCAGTAAGGAGGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS CAA 72 bp | CTGACTGCGGGCCATGGCTTCCTGTGCTTTTTCTCCTaGACGTTTAGCGCTGCCTTGAGATTTGGCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTAGHGFLCFFS*TFSAALRFGGS Trigger: GCTGCCGCCAAATCTCAAGGCAGCGCTAAACGTCAAGGAGAAAAAGCACAGGAAGCCATGGCCCGCAGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS CAA 72 bp | AGAGCTCCTCCGTTGCTCCAGCACTGTCTCCTTCTCTaGGAGCTCCTGAAGAGCCGCCTTGTGAGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAPPLLQHCLLL*ELLKSRLVSVF Trigger: GAAGACACTCACAAGGCGGCTCTTCAGGAGCTCCAAGAGAAGGAGACAGTGCTGGAGCAACGGAGGAGCTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CAA 90 bp | CTGATCTCCTCCTTACTGGGCCATATCTCGGAGGCGGCGTTGGATTaGCGGAGCTCACTCAGGTCTAGCCTTTCCATAGGTGGGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LISSLLGHISEAALD*RSSLRSSLSIGGKK Trigger: CTTCTTCCCACCTATGGAAAGGCTAGACCTGAGTGAGCTCCGCAAATCCAACGCCGCCTCCGAGATATGGCCCAGTAAGGAGGAGATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS CAA 90 bp | GTTGCCAGTAGAGCTCCTCCGTTGCTCCAGCACTGTCTCCTTCTCTaGGAGCTCCTGAAGAGCCGCCTTGTGAGTGTCTTCCATCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VASRAPPLLQHCLLL*ELLKSRLVSVFHPV Trigger: AACAGGATGGAAGACACTCACAAGGCGGCTCTTCAGGAGCTCCAAGAGAAGGAGACAGTGCTGGAGCAACGGAGGAGCTCTACTGGCAAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS GCA 72 bp | GTGGACCTCTTCCTGACTGCGGGCCATGGCTTCCTGTaGTTTTTCTCCTTGACGTTTAGCGCTGCCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VDLFLTAGHGFL*FFSLTFSAALR Trigger: TCTCAAGGCAGCGCTAAACGTCAAGGAGAAAAAGCACAGGAAGCCATGGCCCGCAGTCAGGAAGAGGTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 72 bp | TCCTTACTGGGCCATATCTCGGAGGCGGCGTTGGATTaGCGGAGCTCACTCAGGTCTAGCCTTTCCATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLLGHISEAALD*RSSLRSSLSIG Trigger: ACCTATGGAAAGGCTAGACCTGAGTGAGCTCCGCAAATCCAACGCCGCCTCCGAGATATGGCCCAGTAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS CAA 72 bp | TTTTGGTACCCTGAAGGGAGGTTGGGCAAGATGCCTTaGAAGGAGGTGGACCTCTTCCTGACTGCGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FWYPEGRLGKMP*KEVDLFLTAGH Trigger: ATGGCCCGCAGTCAGGAAGAGGTCCACCTCCTTCAAAGGCATCTTGCCCAACCTCCCTTCAGGGTACCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 90 bp | CTTGGAGCTCCTGAAGAGCCGCCTTGTGAGTGTCTTCCATCCTGTTaGCATGAACTGTGTTTTGGTACCCTGACTGCGGGCCATGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGAPEEPPCECLPSC*HELCFGTLTAGHGF Trigger: GAAGCCATGGCCCGCAGTCAGGGTACCAAAACACAGTTCATGCAAACAGGATGGAAGACACTCACAAGGCGGCTCTTCAGGAGCTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS CAA 72 bp | CCTGAAGAGCCGCCTTGTGAGTGTCTTCCATCCTGTTaGCATGAACTGTGTTTTGGTACCCTGACTGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PEEPPCECLPSC*HELCFGTLTAG Trigger: GCCCGCAGTCAGGGTACCAAAACACAGTTCATGCAAACAGGATGGAAGACACTCACAAGGCGGCTCTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
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| CDS TCA 72 bp | GGGATACTGAAGGTCATTGCTGCCCATCTTAGGTGCTaGGACTTCTGGAAGCAACTCATCTCCAGGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GILKVIAAHLRC*DFWKQLISREG Trigger: GCCTTCCCTGGAGATGAGTTGCTTCCAGAAGTCTCAGCACCTAAGATGGGCAGCAATGACCTTCAGTATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS GCA 72 bp | GTACCCAGGAAACTTCGAGTGCGGATCTGCTGTGTGTaGCGCTTTATCTTGTCCTCCAGCTCTGCTAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VPRKLRVRICCV*RFILSSSSANG Trigger: ACCATTAGCAGAGCTGGAGGACAAGATAAAGCGGCACACACAGCAGATCCGCACTCGAAGTTTCCTGGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS GCA 72 bp | TGTTTTGGTACCCTGACTGCGGGCCATGGCTTCCTGTaGTTTTTCTCCTTGACGTTTAGCGCTGCCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CFGTLTAGHGFL*FFSLTFSAALR Trigger: TCTCAAGGCAGCGCTAAACGTCAAGGAGAAAAAGCACAGGAAGCCATGGCCCGCAGTCAGGGTACCAAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106104.8 |
||
| CDS CAA 90 bp | TGCCTTGAGATTTGGCGGCAGCTCAACAGCCAAGAGCTTCTTCTCTaGAATCTCCACCTGCTCATTCTCCACAATCTCCTGCCTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CLEIWRQLNSQELLL*NLHLLILHNLLPQL Trigger: AAGCTGAGGCAGGAGATTGTGGAGAATGAGCAGGTGGAGATTCAAGAGAAGAAGCTCTTGGCTGTTGAGCTGCCGCCAAATCTCAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS CCA 72 bp | TCCATAGGTGGGAAGAAGTCAGCCTTCTCCTTCTCCTaGTCTGGGTCATTAAGGCTGTTCTCACTAGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SIGGKKSAFSFS*SGSLRLFSLGE Trigger: CTCACCTAGTGAGAACAGCCTTAATGACCCAGACCAGGAGAAGGAGAAGGCTGACTTCTTCCCACCTATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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| CDS CAA 72 bp | CCTGAAGAGCCGCCTTGTGAGTGTCTTCCATCCTGTTaGCATGAACTGTGTTTTGGTACCCTGAAGGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PEEPPCECLPSC*HELCFGTLKGG Trigger: ACCTCCCTTCAGGGTACCAAAACACAGTTCATGCAAACAGGATGGAAGACACTCACAAGGCGGCTCTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 72 bp | CTTCGAGTGCGGATCTGCTGTGTGTGCCGCTTTATCTaGTCCTCCAGCTCTGCTAATGGTGAGGCACTTATT | + |
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Preference number: 6 (lower is better) Translates to: LRVRICCVCRFI*SSSSANGEALI Trigger: AATAAGTGCCTCACCATTAGCAGAGCTGGAGGACAAGATAAAGCGGCACACACAGCAGATCCGCACTCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS TCA 72 bp | TGGGCAGCAGTTGGAAGAAATCCTCCGGAATCTCCCTaGGCAAATTCCTCTGCAGGTGTAATTGTTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: WAAVGRNPPESP*ANSSAGVIVGG Trigger: ACCTCCAACAATTACACCTGCAGAGGAATTTGCTCAGGGAGATTCCGGAGGATTTCTTCCAACTGCTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000156768.8 |
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| CDS TCA 72 bp | TGGGCAGCAGTTGGAAGAAATCCTCCGGAATCTCCCTaGGCAAATTCCTCTGCAGGTGTAATTGCATTGTGC | + |
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Preference number: 6 (lower is better) Translates to: WAAVGRNPPESP*ANSSAGVIALC Trigger: GCACAATGCAATTACACCTGCAGAGGAATTTGCTCAGGGAGATTCCGGAGGATTTCTTCCAACTGCTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135509.2 |
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| CDS GCA 72 bp | TGTCTTGCATTGGGTTTGTACCCAGGAAACTTCGAGTaGGGATCTGCTGTGTGTGCCGCTTTATCTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CLALGLYPGNFE*GSAVCAALSCP Trigger: AGGACAAGATAAAGCGGCACACACAGCAGATCCGCACTCGAAGTTTCCTGGGTACAAACCCAATGCAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 72 bp | TTCCAGGTCCTGGTTGGCTGTCTTAATGTCTTGCATTaGGTTTGTACCCAGGAAACTTCGAGTGCGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: FQVLVGCLNVLH*VCTQETSSADL Trigger: CAGATCCGCACTCGAAGTTTCCTGGGTACAAACCCAATGCAAGACATTAAGACAGCCAACCAGGACCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 72 bp | AGTGGTTTCCAGGTCCTGGTTGGCTGTCTTAATGTCTaGCATTGGGTTTGTACCCAGGAAACTTCGAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: SGFQVLVGCLNV*HWVCTQETSSA Trigger: CGCACTCGAAGTTTCCTGGGTACAAACCCAATGCAAGACATTAAGACAGCCAACCAGGACCTGGAAACCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 72 bp | GGAATCTTCGATGCCATCATGTTACTATGTGGAGGTTaGAGTTTACTGAGTTCCCTCCTGGTCCTCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: GIFDAIMLLCGG*SLLSSLLVLMC Trigger: GCACATGAGGACCAGGAGGGAACTCAGTAAACTCCAACCTCCACATAGTAACATGATGGCATCGAAGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CCA 72 bp | GGCAAAGGGAATCTTCGATGCCATCATGTTACTATGTaGAGGTTGGAGTTTACTGAGTTCCCTCCTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GKGNLRCHHVTM*RLEFTEFPPGP Trigger: AGGACCAGGAGGGAACTCAGTAAACTCCAACCTCCACATAGTAACATGATGGCATCGAAGATTCCCTTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 72 bp | GGGAATCTTCGATGCCATCATGTTACTATGTGGAGGTaGGAGTTTACTGAGTTCCCTCCTGGTCCTCATGTG | + |
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Preference number: 6 (lower is better) Translates to: GNLRCHHVTMWR*EFTEFPPGPHV Trigger: CACATGAGGACCAGGAGGGAACTCAGTAAACTCCAACCTCCACATAGTAACATGATGGCATCGAAGATTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 90 bp | AAGTTTCTTAGTGGTTTCCAGGTCCTGGTTGGCTGTCTTAATGTCTaGCATTGGGTTTGTACCCAGGAAACTTCGAGTGCGGATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: KFLSGFQVLVGCLNV*HWVCTQETSSADLL Trigger: CAGCAGATCCGCACTCGAAGTTTCCTGGGTACAAACCCAATGCAAGACATTAAGACAGCCAACCAGGACCTGGAAACCACTAAGAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS GCA 72 bp | AAGAAATCCTCCGGAATCTCCCTGAGCAAATTCCTCTaGAGGTGTAATTGCATTGTGCTGCCTTCCTACTCT | + |
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Preference number: 6 (lower is better) Translates to: KKSSGISLSKFL*RCNCIVLPSYS Trigger: AGAGTAGGAAGGCAGCACAATGCAATTACACCTGCAGAGGAATTTGCTCAGGGAGATTCCGGAGGATTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135509.2 |
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| CDS CCA 72 bp | CTCTCCGCTGGGCTTCACTTTCCCAAATGGACTTACTaGCATTTTCTCATAGTCTGTCAGATCTGTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LSAGLHFPKWTY*HFLIVCQICGK Trigger: TTTGCCACAGATCTGACAGACTATGAGAAAATGCCAGTAAGTCCATTTGGGAAAGTGAAGCCCAGCGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS TCA 72 bp | AATGTTTGTGAGAGCCAATCCCAGATGGAAGAACCTTaGTTTTGTTGTAACGGAGGTCCAGCCATGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: NVCESQSQMEEP*FCCNGGPAMSG Trigger: ACCTGACATGGCTGGACCTCCGTTACAACAAAATCAAGGTTCTTCCATCTGGGATTGGCTCTCACAAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000135509.2 |
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| CDS TCA 72 bp | AAGGTCATCTCCACTTTCAGTTTCCTTAACTCCTCCTaGAGTTTCTTAGTGGTTTCCAGGTCCTGGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: KVISTFSFLNSS*SFLVVSRSWLA Trigger: AGCCAACCAGGACCTGGAAACCACTAAGAAACTTCAGGAGGAGTTAAGGAAACTGAAAGTGGAGATGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 72 bp | CTGAGCAAATTCCTCTGCAGGTGTAATTGTTGGAGGTaGGGAATTTTAAAGAACTTTCCCAAATGGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSKFLCRCNCWR*GILKNFPKWRR Trigger: CCTGCGCCATTTGGGAAAGTTCTTTAAAATTCCCAACCTCCAACAATTACACCTGCAGAGGAATTTGCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000156768.8 |
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| CDS GCA 72 bp | AAGAAATCCTCCGGAATCTCCCTGAGCAAATTCCTCTaGAGGTGTAATTGTTGGAGGTTGGGAATTTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: KKSSGISLSKFL*RCNCWRLGILK Trigger: CTTTAAAATTCCCAACCTCCAACAATTACACCTGCAGAGGAATTTGCTCAGGGAGATTCCGGAGGATTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000156768.8 |
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| CDS GCA 72 bp | ATAGTCTGTCAGATCTGTGGCAAAGGGAATCTTCGATaGCATCATGTTACTATGTGGAGGTTGGAGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: IVCQICGKGNLR*HHVTMWRLEFT Trigger: AGTAAACTCCAACCTCCACATAGTAACATGATGGCATCGAAGATTCCCTTTGCCACAGATCTGACAGACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 90 bp | ATGACTTCCAGGTTCTTGAAGATTGTTGATTGCAATAGTGGTGTTTaGGAGGTTGGGAATTTTAAAGAACTTTCCCAAATGGCGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: MTSRFLKIVDCNSGV*EVGNFKELSQMAQA Trigger: GGCCTGCGCCATTTGGGAAAGTTCTTTAAAATTCCCAACCTCCAAAACACCACTATTGCAATCAACAATCTTCAAGAACCTGGAAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135509.2 |
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| CDS CCA 72 bp | CAAAGTTTTCAAATGTTTGTGAGAGCCAATCCCAGATaGAAGAACCTTGATTTTGTTGTAACGGAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QSFQMFVRANPR*KNLDFVVTEVQ Trigger: CTGGACCTCCGTTACAACAAAATCAAGGTTCTTCCATCTGGGATTGGCTCTCACAAACATTTGAAAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 ENSMUST00000135509.2 |
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| CDS CCA 72 bp | GACTTACTGGCATTTTCTCATAGTCTGTCAGATCTGTaGCAAAGGGAATCTTCGATGCCATCATGTTACTAT | + |
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Preference number: 6 (lower is better) Translates to: DLLAFSHSLSDL*QRESSMPSCYY Trigger: ATAGTAACATGATGGCATCGAAGATTCCCTTTGCCACAGATCTGACAGACTATGAGAAAATGCCAGTAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016124.15 |
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| CDS CAA 72 bp | AGTGTAGTGACCTGCCCCAGCTCAACGGGTAACATTTaGATAGGATTTCGTTCTAGAAGCAAAGTTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SVVTCPSSTGNI*IGFRSRSKVFK Trigger: TTTGAAAACTTTGCTTCTAGAACGAAATCCTATCAAAATGTTACCCGTTGAGCTGGGGCAGGTCACTACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016124.15 ENSMUST00000106104.8 |
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