Pregenerated sensors for LRRC25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049988Ensembl transcript IDs: ENSMUST00000052437.6, ENSMUST00000210609.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAGCAACAGAAGGGACAGCGGCAGGGACCGAGGTGGAGGCAGCTaGAGCAGCAGAGGCGACTCTCCCTCCCTGCTCCGGTTCTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: WSNRRDSGRDRGGGS*SSRGDSPSLLRFSP Trigger: GGGAGAGAACCGGAGCAGGGAGGGAGAGTCGCCTCTGCTGCTGCAGCTGCCTCCACCTCGGTCCCTGCCGCTGTCCCTTCTGTTGCTCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR CCA 90 bp | CCCTCCCTGCTCCGGTTCTCTCCCTTTCGCCTGAACCCTCGCATCTaGCTGGGCCAGAGATCTCCGTGGGAAGCCTCTGAGCGAGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: PSLLRFSPFRLNPRI*LGQRSPWEASERGP Trigger: GGGCCCTCGCTCAGAGGCTTCCCACGGAGATCTCTGGCCCAGCCAGATGCGAGGGTTCAGGCGAAAGGGAGAGAACCGGAGCAGGGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 90 bp | GCAGAGGCGACTCTCCCTCCCTGCTCCGGTTCTCTCCCTTTCGCCTaGACCCTCGCATCTGGCTGGGCCAGAGATCTCCGTGGGAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: AEATLPPCSGSLPFA*TLASGWARDLRGKP Trigger: AGGCTTCCCACGGAGATCTCTGGCCCAGCCAGATGCGAGGGTTCAGGCGAAAGGGAGAGAACCGGAGCAGGGAGGGAGAGTCGCCTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 90 bp | GAACCCTCGCATCTGGCTGGGCCAGAGATCTCCGTGGGAAGCCTCTaGGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTG | + |
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Preference number: 1 (lower is better) Translates to: EPSHLAGPEISVGSL*ARAHKALYGSQQPL Trigger: CAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCCACGGAGATCTCTGGCCCAGCCAGATGCGAGGGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR CCA 90 bp | GATCTCCGTGGGAAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATaGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGAGGAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: DLRGKPLSEGPQGPV*ISTAAGCQASRGDR Trigger: TCTGTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCCACGGAGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR CCA 90 bp | TCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTaGGTGCCAGGCAAGCAGAGGAGACAGAGTGCAGAACCGAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: SERGPTRPCMDLNSR*VPGKQRRQSAEPRV Trigger: AACTCTCGGTTCTGCACTCTGTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 90 bp | GGGTGCCAGGCAAGCAGAGGAGACAGAGTGCAGAACCGAGAGTTCTaGTGGAGTTCGGACTCTCCGGAAACCACCGGTCAGTCCTGCGTA | + |
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Preference number: 1 (lower is better) Translates to: GCQASRGDRVQNREF*WSSDSPETTGQSCV Trigger: TACGCAGGACTGACCGGTGGTTTCCGGAGAGTCCGAACTCCATCAGAACTCTCGGTTCTGCACTCTGTCTCCTCTGCTTGCCTGGCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR GCA 90 bp | GGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGAGGAGACAGAGTaGAGAACCGAGAGTTCTGATGGAGTTCGGACTCTCCGGAAACCA | + |
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Preference number: 1 (lower is better) Translates to: GSQQPLGARQAEETE*RTESSDGVRTLRKP Trigger: TGGTTTCCGGAGAGTCCGAACTCCATCAGAACTCTCGGTTCTGCACTCTGTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 90 bp | CACCGGTCAGTCCTGCGTAGAGTCAGCTGCTCCCAGAGCTTTTATTaGGCATCACATGCATGCACACTGACCGGAGGGTTGTTTCTGACC | + |
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Preference number: 1 (lower is better) Translates to: HRSVLRRVSCSQSFY*ASHACTLTGGLFLT Trigger: GGTCAGAAACAACCCTCCGGTCAGTGTGCATGCATGTGATGCTCAATAAAAGCTCTGGGAGCAGCTGACTCTACGCAGGACTGACCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 90 bp | ACACCTTTAATCCCAGCACTTGGGAGGCACAGGCAGGCAGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: TPLIPALGRHRQADF*VRGQPGLQSEFQDS Trigger: GCTGTCCTGAAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTGTGCCTCCCAAGTGCTGGGATTAAAGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 90 bp | CTCGAAACAACAACAACAAGTCCATCCAGGAGGAATAAATGTGTGTaGGAATTACTCACTGAGAGTTTCTGTCATAAGACCTGTAACACT | + |
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Preference number: 1 (lower is better) Translates to: LETTTTSPSRRNKCV*ELLTESFCHKTCNT Trigger: AGTGTTACAGGTCTTATGACAGAAACTCTCAGTGAGTAATTCTCACACACATTTATTCCTCCTGGATGGACTTGTTGTTGTTGTTTCGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR TCA 90 bp | CACTGCCGCTTAGGGAAGAGATCTGCCGCCAGAAGCAGCTCTTCAGCACCACCCTCCGTGGGAAGCCTCTaGGCGAGGGCCCACAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HCRLGKRSAARSSSSAPPSVGSL*ARAHKA Trigger: GGCCTTGTGGGCCCTCGCTCAGAGGCTTCCCACGGA...GGGTGGTGCTGAAGAGCTGCTTCTGGCGGCAGATCTCTTCCCTAAGCGGCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGCAGCAGAGGCGACTCTCCCTCCCTGCTCCGGTTCTCTCCCTTTCGCCCCGGAGGGTTGTTTCTaGCCCTCCTTCTGCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: AAAAEATLPPCSGSLPFAPEGCF*PSFCFG Trigger: CCCAAAGCAGAAGGAGGGTCAGAAACAACCCTCCGG...GGCGAAAGGGAGAGAACCGGAGCAGGGAGGGAGAGTCGCCTCTGCTGCTGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAGCAGCAGAGGCGACTCTCCCTCCCTGCTCCGGTTCTCTCCCTTTCGCCCCACAAGGCCCTGTATaGATCTCAACAGCCGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: AAAAEATLPPCSGSLPFAPQGPV*ISTAAG Trigger: CCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGG...GGCGAAAGGGAGAGAACCGGAGCAGGGAGGGAGAGTCGCCTCTGCTGCTGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCGCTTAGGGAAGAGATCTGCCGCCAGAAGCAGCTCTTCAGCACCACCCGATCTCAACAGCCGCTaGGTGCCAGGCAAGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: HCRLGKRSAARSSSSAPPDLNSR*VPGKQR Trigger: CCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATC...GGGTGGTGCTGAAGAGCTGCTTCTGGCGGCAGATCTCTTCCCTAAGCGGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCGCTTAGGGAAGAGATCTGCCGCCAGAAGCAGCTCTTCAGCACCACCCCTGAACCCTCGCATCTaGCTGGGCCAGAGATCTCCG | + |
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Preference number: 2 (lower is better) Translates to: HCRLGKRSAARSSSSAPPLNPRI*LGQRSP Trigger: CGGAGATCTCTGGCCCAGCCAGATGCGAGGGTTCAG...GGGTGGTGCTGAAGAGCTGCTTCTGGCGGCAGATCTCTTCCCTAAGCGGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR GCA 90 bp | AGCGACCCGTGCAGGTCTTGGAGCAACAGAAGGGACAGCGGCAGGGACCGAGGTGCAGAGGAGACAGAGTaGAGAACCGAGAGTTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: SDPCRSWSNRRDSGRDRGAEETE*RTESSD Trigger: ATCAGAACTCTCGGTTCTGCACTCTGTCTCCTCTGC...ACCTCGGTCCCTGCCGCTGTCCCTTCTGTTGCTCCAAGACCTGCACGGGTCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR GCA 90 bp | CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGACAGCCCGAGGTGGAGGCAGCTaGAGCAGCAGAGGCGACTCT | + |
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Preference number: 2 (lower is better) Translates to: QISEFEASLVYRVSFRTARGGGS*SSRGDS Trigger: AGAGTCGCCTCTGCTGCTGCAGCTGCCTCCACCTCG...GGCTGTCCTGAAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTTTATTGAGCATCACATaGATGCACACTGACCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GKPLSEGPQGPVWISTAALLSIT*MHTDRR Trigger: CCTCCGGTCAGTGTGCATGCATGTGATGCTCAATAA...AGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTCCCAGAGCTTTTATTaGGCATCACATGCATGCACA | + |
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Preference number: 2 (lower is better) Translates to: KPLSEGPQGPVWISTAAGSQSFY*ASHACT Trigger: TGTGCATGCATGTGATGCTCAATAAAAGCTCTGGGA...CCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR TCA 90 bp | TCGAAACAACAACAACAAGTCCATCCAGGAGGAATAAATGTGTGTGAGAATTACCAGAACCGAGAGTTCTaGTGGAGTTCGGACTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: SKQQQQVHPGGINVCENYQNREF*WSSDSP Trigger: CGGAGAGTCCGAACTCCATCAGAACTCTCGGTTCTG...GTAATTCTCACACACATTTATTCCTCCTGGATGGACTTGTTGTTGTTGTTTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR GCA 72 bp | AGAAGGGACAGCGGCAGGGACCGAGGTGGAGGCAGCTaGAGCAGCAGAGGCGACTCTCCCTCCCTGCTCCGG | + |
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Preference number: 3 (lower is better) Translates to: RRDSGRDRGGGS*SSRGDSPSLLR Trigger: CCGGAGCAGGGAGGGAGAGTCGCCTCTGCTGCTGCAGCTGCCTCCACCTCGGTCCCTGCCGCTGTCCCTTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR CCA 72 bp | CTGAACCCTCGCATCTGGCTGGGCCAGAGATCTCCGTaGGAAGCCTCTGAGCGAGGGCCCACAAGGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LNPRIWLGQRSP*EASERGPTRPC Trigger: ACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCCACGGAGATCTCTGGCCCAGCCAGATGCGAGGGTTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR CCA 72 bp | GGGAAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATaGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GKPLSEGPQGPV*ISTAAGCQASR Trigger: TCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR CCA 72 bp | CTCCGGTTCTCTCCCTTTCGCCTGAACCCTCGCATCTaGCTGGGCCAGAGATCTCCGTGGGAAGCCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LRFSPFRLNPRI*LGQRSPWEASE Trigger: CTCAGAGGCTTCCCACGGAGATCTCTGGCCCAGCCAGATGCGAGGGTTCAGGCGAAAGGGAGAGAACCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 72 bp | CATCTGGCTGGGCCAGAGATCTCCGTGGGAAGCCTCTaGGCGAGGGCCCACAAGGCCCTGTATGGATCTCAA | + |
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Preference number: 3 (lower is better) Translates to: HLAGPEISVGSL*ARAHKALYGSQ Trigger: TTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCCACGGAGATCTCTGGCCCAGCCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR CCA 72 bp | GGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTaGGTGCCAGGCAAGCAGAGGAGACAGAGTGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: GPTRPCMDLNSR*VPGKQRRQSAE Trigger: TTCTGCACTCTGTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGAGGAGACACACTGACCGGAGGGTaGTTTCTGACCCTCCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: QGPVWISTAAGCQASRGDTLTGG*FLTLLL Trigger: CAGAAGGAGGGTCAGAAACAACCCTCCGGTCAGTGT...GTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAGCTGCAGCAGCAGAGGCGACTCTCCCTCCCTGCTCCGGTTCTCTCCCTCTCCCAGAGCTTTTATaGAGCATCACATGCATGCAC | + |
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Preference number: 3 (lower is better) Translates to: EAAAAAEATLPPCSGSLPLPELL*SITCMH Trigger: GTGCATGCATGTGATGCTCAATAAAAGCTCTGGGAG...AGGGAGAGAACCGGAGCAGGGAGGGAGAGTCGCCTCTGCTGCTGCAGCTGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR GCA 72 bp | TGGAGTTCGGACTCTCCGGAAACCACCGGTCAGTCCTaGGTAGAGTCAGCTGCTCCCAGAGCTTTTATTGAG | + |
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Preference number: 3 (lower is better) Translates to: WSSDSPETTGQS*VESAAPRAFIE Trigger: CTCAATAAAAGCTCTGGGAGCAGCTGACTCTACGCAGGACTGACCGGTGGTTTCCGGAGAGTCCGAACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR GCA 72 bp | ATAAGACCTGTAACACTGCCGCTTAGGGAAGAGATCTaGCGCCAGAAGCAGCTCTTCAGCACCACCCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: IRPVTLPLREEI*RQKQLFSTTPS Trigger: GCTTGGGGTGGTGCTGAAGAGCTGCTTCTGGCGGCAGATCTCTTCCCTAAGCGGCAGTGTTACAGGTCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 72 bp | GTCCTGCGTAGAGTCAGCTGCTCCCAGAGCTTTTATTaGGCATCACATGCATGCACACTGACCGGAGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: VLRRVSCSQSFY*ASHACTLTGGL Trigger: CAACCCTCCGGTCAGTGTGCATGCATGTGATGCTCAATAAAAGCTCTGGGAGCAGCTGACTCTACGCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| 3UTR TCA 72 bp | ACAACAACAAGTCCATCCAGGAGGAATAAATGTGTGTaGGAATTACTCACTGAGAGTTTCTGTCATAAGACC | + |
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Preference number: 3 (lower is better) Translates to: TTTSPSRRNKCV*ELLTESFCHKT Trigger: GGTCTTATGACAGAAACTCTCAGTGAGTAATTCTCACACACATTTATTCCTCCTGGATGGACTTGTTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | AGCGACCCGTGCAGGTCTTGGAGCAACAGAAGGGACAGCGGCAGGGACCGAGGTGTGAGTCTGGGGCCTTaGGGCCAGGTCGCCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SDPCRSWSNRRDSGRDRGVSLGP*GQVAGC Trigger: GCAGCCGGCGACCTGGCCCCAAGGCCCCAGACTCAC...ACCTCGGTCCCTGCCGCTGTCCCTTCTGTTGCTCCAAGACCTGCACGGGTCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | CCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCGAACCTGCTGGGTGGTaGGTCTGGGGCCTTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLSEGPQGPVWISTAAGCEPAGW*VWGLGA Trigger: GGCCCCAAGGCCCCAGACTCACCACCCAGCAGGTTC...GCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | CCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCTCTGGCTGCAGACCATaGGCAGTCCTCGGCCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLSEGPQGPVWISTAAGCSGCRP*AVLGRL Trigger: CAGCCGGCCGAGGACTGCTCATGGTCTGCAGCCAGA...GCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | GTCTTGGAGCAACAGAAGGGACAGCGGCAGGGACCGAGGTGGAGGCAGCTGCAGCAACAAGGGCTCCAATaGTCCCCGGGCCCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLEQQKGQRQGPRWRQLQQQGLQ*SPGPSW Trigger: CCAGCTGGGGCCCGGGGACCATTGGAGCCCTTGTTG...CTGCAGCTGCCTCCACCTCGGTCCCTGCCGCTGTCCCTTCTGTTGCTCCAAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | GAGGCAGCTGCAGCAGCAGAGGCGACTCTCCCTCCCTGCTCCGGTTCTCTCCCTGGGGGACAGCTGACCTaGAGGAAGGTGGAGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: EAAAAAEATLPPCSGSLPGGQLT*RKVERF Trigger: GAACCTCTCCACCTTCCTTCAGGTCAGCTGTCCCCC...AGGGAGAGAACCGGAGCAGGGAGGGAGAGTCGCCTCTGCTGCTGCAGCTGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | CCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCGACAGGTCCAGGACTTaGGCATGGCTGGCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PLSEGPQGPVWISTAAGCDRSRT*AWLACK Trigger: CTTGCAGGCCAGCCATGCTCAAGTCCTGGACCTGTC...GCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | CCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCAGCTGCAGTCTGCCTTaGGCTCCAGGTCACAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: PLSEGPQGPVWISTAAGCSCSLP*APGHSA Trigger: TGCGCTGTGACCTGGAGCTCAAGGCAGACTGCAGCT...GCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR GCA 90 bp | GAGGCAGCTGCAGCAGCAGAGGCGACTCTCCCTCCCTGCTCCGGTTCTCTCCCTAGACACAGTAGCTGCTaGTGCCCGGAGCAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: EAAAAAEATLPPCSGSLPRHSSC*CPEQFW Trigger: CCAGAACTGCTCCGGGCAGCAGCAGCTACTGTGTCT...AGGGAGAGAACCGGAGCAGGGAGGGAGAGTCGCCTCTGCTGCTGCAGCTGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR GCA 90 bp | CTGAACCCTCGCATCTGGCTGGGCCAGAGATCTCCGTGGGAAGCCTCTGAGCGAGCTTTGCTGAGGCTGTaGTCACTGGCTCTGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LNPRIWLGQRSPWEASERALLRL*SLALRR Trigger: CCGCCGCAGAGCCAGTGAGCACAGCCTCAGCAAAGC...TCGCTCAGAGGCTTCCCACGGAGATCTCTGGCCCAGCCAGATGCGAGGGTTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | CAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGAGGAGACCTGCAAGGGGCTCCTTaGCAGGGACAGGCCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QGPVWISTAAGCQASRGDLQGAP*QGQAKA Trigger: GGCCTTGGCCTGTCCCTGCCAAGGAGCCCCTTGCAG...GTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | CTGAACCCTCGCATCTGGCTGGGCCAGAGATCTCCGTGGGAAGCCTCTGAGCGACCAGCACAGATCCACTaGCAGCCACAGCCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LNPRIWLGQRSPWEASERPAQIH*QPQPGR Trigger: TCTCCCTGGCTGTGGCTGTCAGTGGATCTGTGCTGG...TCGCTCAGAGGCTTCCCACGGAGATCTCTGGCCCAGCCAGATGCGAGGGTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | GTCTTGGAGCAACAGAAGGGACAGCGGCAGGGACCGAGGTGGAGGCAGCTGCAGACATCTGGGCTTTGCTaGGGCTGTGCTCACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VLEQQKGQRQGPRWRQLQTSGLC*GCAHWL Trigger: GAGCCAGTGAGCACAGCCTCAGCAAAGCCCAGATGT...CTGCAGCTGCCTCCACCTCGGTCCCTGCCGCTGTCCCTTCTGTTGCTCCAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | GTCTTGGAGCAACAGAAGGGACAGCGGCAGGGACCGAGGTGGAGGCAGCTGCAGTCGTGTGGGGACATCTaGGCTTTGCTGAGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: VLEQQKGQRQGPRWRQLQSCGDI*ALLRLC Trigger: GCACAGCCTCAGCAAAGCCCAGATGTCCCCACACGA...CTGCAGCTGCCTCCACCTCGGTCCCTGCCGCTGTCCCTTCTGTTGCTCCAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR GCA 90 bp | GTCTTGGAGCAACAGAAGGGACAGCGGCAGGGACCGAGGTGGAGGCAGCTGCAGCCAGGGACTCCAGGTTaGAATAGACGGGCTGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: VLEQQKGQRQGPRWRQLQPGTPG*NRRAES Trigger: ACTCTCAGCCCGTCTATTGCAACCTGGAGTCCCTGG...CTGCAGCTGCCTCCACCTCGGTCCCTGCCGCTGTCCCTTCTGTTGCTCCAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | CACTGCCGCTTAGGGAAGAGATCTGCCGCCAGAAGCAGCTCTTCAGCACCACCCGGACTTGAGCATGGCTaGCCTGCAAGGGGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HCRLGKRSAARSSSSAPPGLEHG*PARGSL Trigger: CAAGGAGCCCCTTGCAGGCCAGCCATGCTCAAGTCC...GGGTGGTGCTGAAGAGCTGCTTCTGGCGGCAGATCTCTTCCCTAAGCGGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | GGGAAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGTGAACCATGCAGGTaGGATCTTGACTTCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: GKPLSEGPQGPVWISTAAGEPCR*DLDFLT Trigger: AGTCAGGAAGTCAAGATCTCACCTGCATGGTTCACC...AGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR GCA 90 bp | GGGAAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGTGACAATCAGGGTCTaGAGCTTTTCCAGCTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: GKPLSEGPQGPVWISTAAVTIRV*SFSSLS Trigger: CGACAAGCTGGAAAAGCTGCAGACCCTGATTGTCAC...AGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR TCA 90 bp | CAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGAGGAGACGTGCCATTAAATGTCTaGGTCCAGTCTACCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QGPVWISTAAGCQASRGDVPLNV*VQSTLL Trigger: GAGCAGGGTAGACTGGACTCAGACATTTAATGGCAC...GTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGACAGCCGGTGGAGAGGTTCCTTaGAGCTTCGGTGGCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: QISEFEASLVYRVSFRTAGGEVP*SFGGWV Trigger: CACCCAGCCACCGAAGCTCCAAGGAACCTCTCCACC...GGCTGTCCTGAAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | AAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGGCAGGAAATCTGTCACTaGTTTGGGGATATCGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: KPLSEGPQGPVWISTAAGQEICH*FGDIVW Trigger: CCACACGATATCCCCAAACCAGTGACAGATTTCCTG...CCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR GCA 90 bp | CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGACAGCCCCCACAGCTGCAGTCTaGCTTGAGCTCCAGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: QISEFEASLVYRVSFRTAPTAAV*LELQVT Trigger: TGTGACCTGGAGCTCAAGGCAGACTGCAGCTGTGGG...GGCTGTCCTGAAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGACAGCCCAGAAGGGCTGTTTCTaGCTGCAGACCATGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: QISEFEASLVYRVSFRTAQKGCF*LQTMSS Trigger: ACTGCTCATGGTCTGCAGCCAGAAACAGCCCTTCTG...GGCTGTCCTGAAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CCA 90 bp | TCGAAACAACAACAACAAGTCCATCCAGGAGGAATAAATGTGTGTGAGAATTACAATCTGTCACTGGTTTaGGGATATCGTGTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: SKQQQQVHPGGINVCENYNLSLV*GYRVGT Trigger: TGTCCCCACACGATATCCCCAAACCAGTGACAGATT...GTAATTCTCACACACATTTATTCCTCCTGGATGGACTTGTTGTTGTTGTTTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | GGGAAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGTGAGTCTGGGGCCTaGGGGCCAGGTCGCCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GKPLSEGPQGPVWISTAAGESGA*GPGRRL Trigger: CAGCCGGCGACCTGGCCCCAAGGCCCCAGACTCACC...AGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS GCA 90 bp | GTTCTGGCGGAGAGCATACCAGGAGGCCAGCCCACAGCTGCAGTCTaGCTTGAGCTCCAGGTCACAGCGCAAGGCCAGGGACCTGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: VLAESIPGGQPTAAV*LELQVTAQGQGPVH Trigger: GTGGACAGGTCCCTGGCCTTGCGCTGTGACCTGGAGCTCAAGGCAGACTGCAGCTGTGGGCTGGCCTCCTGGTATGCTCTCCGCCAGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS GCA 90 bp | GGTTTGGGGATATCGTGTGGGGACATCTGGGCTTTGCTGAGGCTGTaGTCACTGGCTCTGCGGCGGCGGCGAAGAAGTCTCCAGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GLGISCGDIWALLRL*SLALRRRRRSLQAS Trigger: GCTGGCCTGGAGACTTCTTCGCCGCCGCCGCAGAGCCAGTGAGCACAGCCTCAGCAAAGCCCAGATGTCCCCACACGATATCCCCAAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS GCA 90 bp | AGGTTCCTTGGAGCTTCGGTGGCTGGGTGTAGACACAGTAGCTGCTaGTGCCCGGAGCAGTTCTGGCGGAGAGCATACCAGGAGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RFLGASVAGCRHSSC*CPEQFWRRAYQEAS Trigger: GCTGGCCTCCTGGTATGCTCTCCGCCAGAACTGCTCCGGGCAGCAGCAGCTACTGTGTCTACACCCAGCCACCGAAGCTCCAAGGAACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | CAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGAGGAGACCAGCTGCAGTCTGCCTaGAGCTCCAGGTCACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: QGPVWISTAAGCQASRGDQLQSA*SSRSQR Trigger: GCGCTGTGACCTGGAGCTCAAGGCAGACTGCAGCTG...GTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS TCA 90 bp | CTGTCACTGGTTTGGGGATATCGTGTGGGGACATCTGGGCTTTGCTaGGGCTGTGCTCACTGGCTCTGCGGCGGCGGCGAAGAAGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LSLVWGYRVGTSGLC*GCAHWLCGGGEEVS Trigger: GGAGACTTCTTCGCCGCCGCCGCAGAGCCAGTGAGCACAGCCTCAGCAAAGCCCAGATGTCCCCACACGATATCCCCAAACCAGTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | AAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTGGGAGACAGGTCCAGGACTaGAGCATGGCTGGCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: KPLSEGPQGPVWISTAAGRQVQD*SMAGLQ Trigger: TTGCAGGCCAGCCATGCTCAAGTCCTGGACCTGTCT...CCCAGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | GTCTTGGAGCAACAGAAGGGACAGCGGCAGGGACCGAGGTGGAGGCAGCTGCAGACACTGTCCAGCTGGTaGTGGGTGACAATCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: VLEQQKGQRQGPRWRQLQTLSSW*WVTIRV Trigger: GACCCTGATTGTCACCCACAACCAGCTGGACAGTGT...CTGCAGCTGCCTCCACCTCGGTCCCTGCCGCTGTCCCTTCTGTTGCTCCAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | CACTGCCGCTTAGGGAAGAGATCTGCCGCCAGAAGCAGCTCTTCAGCACCACCCGGGGACATCTGGGCTTaGCTGAGGCTGTGCTCACTG | + |
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Preference number: 5 (lower is better) Translates to: HCRLGKRSAARSSSSAPPGDIWA*LRLCSL Trigger: CAGTGAGCACAGCCTCAGCAAAGCCCAGATGTCCCC...GGGTGGTGCTGAAGAGCTGCTTCTGGCGGCAGATCTCTTCCCTAAGCGGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | GGGAAGCCTCTGAGCGAGGGCCCACAAGGCCCTGTATGGATCTCAACAGCCGCTTGCAGCTTTTCCAGCTaGTCGAAGAAAGCCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GKPLSEGPQGPVWISTAACSFSS*SKKAPG Trigger: CCCTGGGGCTTTCTTCGACAAGCTGGAAAAGCTGCA...AGCGGCTGTTGAGATCCATACAGGGCCTTGTGGGCCCTCGCTCAGAGGCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | AAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGAGGAGACAAGGTGGAGAGGTTCCTaGGAGCTTCGGTGGCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: KALYGSQQPLGARQAEETRWRGS*ELRWLG Trigger: ACCCAGCCACCGAAGCTCCAAGGAACCTCTCCACCT...TGTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | CAAGGCCCTGTATGGATCTCAACAGCCGCTGGGTGCCAGGCAAGCAGAGGAGACGCCGGCTGCTGTACCTaGGCAGGAAATCTGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: QGPVWISTAAGCQASRGDAGCCT*AGNLSL Trigger: CAGTGACAGATTTCCTGCCAAGGTACAGCAGCCGGC...GTCTCCTCTGCTTGCCTGGCACCCAGCGGCTGTTGAGATCCATACAGGGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS TCA 90 bp | GTAGCAGTCACTGTCCCCAGAAGGGCTGTTTCTGGCTGCAGACCATaGGCAGTCCTCGGCCGGCTGGCCAATAAAGACATTCTCATAATC | + |
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Preference number: 5 (lower is better) Translates to: VAVTVPRRAVSGCRP*AVLGRLANKDILII Trigger: GATTATGAGAATGTCTTTATTGGCCAGCCGGCCGAGGACTGCTCATGGTCTGCAGCCAGAAACAGCCCTTCTGGGGACAGTGACTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS-3UTR CAA 90 bp | TCGAAACAACAACAACAAGTCCATCCAGGAGGAATAAATGTGTGTGAGAATTACCCTGCAAGGGGCTCCTaGGCAGGGACAGGCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SKQQQQVHPGGINVCENYPARGS*AGTGQG Trigger: GCCTTGGCCTGTCCCTGCCAAGGAGCCCCTTGCAGG...GTAATTCTCACACACATTTATTCCTCCTGGATGGACTTGTTGTTGTTGTTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CAA 72 bp | GCATACCAGGAGGCCAGCCCACAGCTGCAGTCTGCCTaGAGCTCCAGGTCACAGCGCAAGGCCAGGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: AYQEASPQLQSA*SSRSQRKARDL Trigger: CAGGTCCCTGGCCTTGCGCTGTGACCTGGAGCTCAAGGCAGACTGCAGCTGTGGGCTGGCCTCCTGGTATGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CAA 72 bp | TCCATTGTGAACCTGCTGGGTGGTGAGTCTGGGGCCTaGGGGCCAGGTCGCCGGCTGCTGTACCTTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SIVNLLGGESGA*GPGRRLLYLGR Trigger: CCTGCCAAGGTACAGCAGCCGGCGACCTGGCCCCAAGGCCCCAGACTCACCACCCAGCAGGTTCACAATGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CAA 90 bp | AGCCCCAGGGAGCACCTGCAGGCCATTCTTAGACAGGTCCAGGACTaGAGCATGGCTGGCCTGCAAGGGGCTCCTTGGCAGGGACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPREHLQAILRQVQD*SMAGLQGAPWQGQA Trigger: GGCCTGTCCCTGCCAAGGAGCCCCTTGCAGGCCAGCCATGCTCAAGTCCTGGACCTGTCTAAGAATGGCCTGCAGGTGCTCCCTGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CAA 90 bp | TGGCGGAGAGCATACCAGGAGGCCAGCCCACAGCTGCAGTCTGCCTaGAGCTCCAGGTCACAGCGCAAGGCCAGGGACCTGTCCACACTG | + |
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Preference number: 6 (lower is better) Translates to: WRRAYQEASPQLQSA*SSRSQRKARDLSTL Trigger: CAGTGTGGACAGGTCCCTGGCCTTGCGCTGTGACCTGGAGCTCAAGGCAGACTGCAGCTGTGGGCTGGCCTCCTGGTATGCTCTCCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS GCA 72 bp | GAGAGCATACCAGGAGGCCAGCCCACAGCTGCAGTCTaGCTTGAGCTCCAGGTCACAGCGCAAGGCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ESIPGGQPTAAV*LELQVTAQGQG Trigger: TCCCTGGCCTTGCGCTGTGACCTGGAGCTCAAGGCAGACTGCAGCTGTGGGCTGGCCTCCTGGTATGCTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS TCA 72 bp | GTTTGGGGATATCGTGTGGGGACATCTGGGCTTTGCTaGGGCTGTGCTCACTGGCTCTGCGGCGGCGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: VWGYRVGTSGLC*GCAHWLCGGGE Trigger: TTCGCCGCCGCCGCAGAGCCAGTGAGCACAGCCTCAGCAAAGCCCAGATGTCCCCACACGATATCCCCAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS GCA 72 bp | GGAGCTTCGGTGGCTGGGTGTAGACACAGTAGCTGCTaGTGCCCGGAGCAGTTCTGGCGGAGAGCATACCAG | + |
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Preference number: 6 (lower is better) Translates to: GASVAGCRHSSC*CPEQFWRRAYQ Trigger: CTGGTATGCTCTCCGCCAGAACTGCTCCGGGCAGCAGCAGCTACTGTGTCTACACCCAGCCACCGAAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS GCA 72 bp | ATATCGTGTGGGGACATCTGGGCTTTGCTGAGGCTGTaGTCACTGGCTCTGCGGCGGCGGCGAAGAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ISCGDIWALLRL*SLALRRRRRSL Trigger: GAGACTTCTTCGCCGCCGCCGCAGAGCCAGTGAGCACAGCCTCAGCAAAGCCCAGATGTCCCCACACGATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CCA 72 bp | TCATGTAGCAGTCACTGTCCCCAGAAGGGCTGTTTCTaGCTGCAGACCATGAGCAGTCCTCGGCCGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SCSSHCPQKGCF*LQTMSSPRPAG Trigger: GCCAGCCGGCCGAGGACTGCTCATGGTCTGCAGCCAGAAACAGCCCTTCTGGGGACAGTGACTGCTACATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CCA 72 bp | CAGCGCAAGGCCAGGGACCTGTCCACACTGTCCAGCTaGTTGTGGGTGACAATCAGGGTCTGCAGCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: QRKARDLSTLSS*LWVTIRVCSFS Trigger: GGAAAAGCTGCAGACCCTGATTGTCACCCACAACCAGCTGGACAGTGTGGACAGGTCCCTGGCCTTGCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CAA 72 bp | CGCAAGGCCAGGGACCTGTCCACACTGTCCAGCTGGTaGTGGGTGACAATCAGGGTCTGCAGCTTTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RKARDLSTLSSW*WVTIRVCSFSS Trigger: GCTGGAAAAGCTGCAGACCCTGATTGTCACCCACAACCAGCTGGACAGTGTGGACAGGTCCCTGGCCTTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS TCA 72 bp | CCAGGGACCTGTCCACACTGTCCAGCTGGTTGTGGGTaGCAATCAGGGTCTGCAGCTTTTCCAGCTTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: PGTCPHCPAGCG*QSGSAAFPACR Trigger: TCGACAAGCTGGAAAAGCTGCAGACCCTGATTGTCACCCACAACCAGCTGGACAGTGTGGACAGGTCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS TCA 72 bp | ACTGTCCCCAGAAGGGCTGTTTCTGGCTGCAGACCATaGGCAGTCCTCGGCCGGCTGGCCAATAAAGACATT | + |
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Preference number: 6 (lower is better) Translates to: TVPRRAVSGCRP*AVLGRLANKDI Trigger: AATGTCTTTATTGGCCAGCCGGCCGAGGACTGCTCATGGTCTGCAGCCAGAAACAGCCCTTCTGGGGACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CCA 72 bp | AAGGCCAGGGACCTGTCCACACTGTCCAGCTGGTTGTaGGTGACAATCAGGGTCTGCAGCTTTTCCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: KARDLSTLSSWL*VTIRVCSFSSL Trigger: CAAGCTGGAAAAGCTGCAGACCCTGATTGTCACCCACAACCAGCTGGACAGTGTGGACAGGTCCCTGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS CAA 72 bp | TTGTGGGTGACAATCAGGGTCTGCAGCTTTTCCAGCTaGTCGAAGAAAGCCCCAGGGAGCACCTGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LWVTIRVCSFSS*SKKAPGSTCRP Trigger: TGGCCTGCAGGTGCTCCCTGGGGCTTTCTTCGACAAGCTGGAAAAGCTGCAGACCCTGATTGTCACCCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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| CDS TCA 72 bp | GAGTCCAGTCTACCCTGCTCGGGTGAACCATGCAGGTaGGATCTTGACTTCCTGACTTGTGAAGCAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ESSLPCSGEPCR*DLDFLTCEAGP Trigger: TGGCCCTGCTTCACAAGTCAGGAAGTCAAGATCTCACCTGCATGGTTCACCCGAGCAGGGTAGACTGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052437.6 ENSMUST00000210609.2 |
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| CDS CCA 72 bp | TGGCAGGAAATCTGTCACTGGTTTGGGGATATCGTGTaGGGACATCTGGGCTTTGCTGAGGCTGTGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: WQEICHWFGDIV*GHLGFAEAVLT Trigger: AGTGAGCACAGCCTCAGCAAAGCCCAGATGTCCCCACACGATATCCCCAAACCAGTGACAGATTTCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052437.6 |
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