Pregenerated sensors for LRRC24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033707Ensembl transcript IDs: ENSMUST00000049956.5
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGGAGAAGCCTGGCTTCAACTTTACTTTGAGCATGCGCGGAGCTaGACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGC | + |
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Preference number: 1 (lower is better) Translates to: SGEAWLQLYFEHARS*TDTCQSPVPASLVR Trigger: GCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTCAAAGTAAAGTTGAAGCCAGGCTTCTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| 3UTR GCA 72 bp | CTTTACTTTGAGCATGCGCGGAGCTGCACCGACACCTaGCAATCCCCAGTGCCTGCGTCATTAGTACGCGCA | + |
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Preference number: 3 (lower is better) Translates to: LYFEHARSCTDT*QSPVPASLVRA Trigger: TGCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTCAAAGTAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CCA 90 bp | CGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCACGGCGGGACAGCCAGTaGCGCGGGGTGGGAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RSCTDTCQSPVPASLVRARRDSQ*RGVGVQ Trigger: CTGGACTCCCACCCCGCGCCACTGGCTGTCCCGCCG...TGCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR TCA 90 bp | TTGAGCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATGGGCTGTGGGTAGCCTaGTGCCTGACAGGCGACCTG | + |
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Preference number: 4 (lower is better) Translates to: LSMRGAAPTPANPQCLRHGLWVA*CLTGDL Trigger: CAGGTCGCCTGTCAGGCATCAGGCTACCCACAGCCC...ATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR TCA 90 bp | TTGAGCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATCCAACAACAGCGCGGTaGGCGCCAGCAGCGCTATGG | + |
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Preference number: 4 (lower is better) Translates to: LSMRGAAPTPANPQCLRHPTTAR*APAALW Trigger: CCATAGCGCTGCTGGCGCTCACCGCGCTGTTGTTGG...ATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CCA 90 bp | TTGAGCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATCGCCACACTCCACTGTaGCGCTGTAGCAGCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSMRGAAPTPANPQCLRHRHTPL*RCSSGR Trigger: CCTGCCGCTGCTACAGCGCCACAGTGGAGTGTGGCG...ATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | GCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCAGGCTGCTCAGAGGCTaGAGGGCCTCCTTGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: AELHRHLPIPSACVISTRRLLRG*RASLLM Trigger: CATCAGCAAGGAGGCCCTGCAGCCTCTGAGCAGCCT...GCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR TCA 90 bp | GCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTCAAGAGCCCAGCCAGTaGAGGGCACAGTCACAACGC | + |
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Preference number: 4 (lower is better) Translates to: ACAELHRHLPIPSACVISQEPSQ*RAQSQR Trigger: GCGTTGTGACTGTGCCCTTCACTGGCTGGGCTCTTG...ACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCAAGCCAGGGCAGCAAGAGGTaGCAGGGAGCCTTGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SCTDTCQSPVPASLVRASQGSKR*QGALLQ Trigger: CTGGAGCAAGGCTCCCTGGCACCTCTTGCTGCCCTG...GCTTGCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | GAGCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGCTGTGATCGCTGTCTaGGTTGCTAGGCCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: EHARSCTDTCQSPVPASLAVIAV*VARPRA Trigger: AGCCCTGGGCCTAGCAACGCAGACAGCGATCACAGC...TAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CCA 90 bp | GCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCTTACCATCGCGAGGCTaGGGCACCTTTCTCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: AELHRHLPIPSACVISTRLPSRG*GTFLQT Trigger: GGTCTGGAGAAAGGTGCCCCAGCCTCGCGATGGTAA...GCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR TCA 90 bp | TGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCCAGTTGGTTCCTGCTaGGGTCCAGTAGGGCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: CAELHRHLPIPSACVISTPVGSC*GPVGLR Trigger: CCTTAGCCCTACTGGACCTCAGCAGGAACCAACTGG...CGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCAAGCTGCAGGAACAGTGTCTaGGTCCCCGGAGGGATTCCC | + |
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Preference number: 4 (lower is better) Translates to: SCTDTCQSPVPASLVRASCRNSV*VPGGIP Trigger: GGGAATCCCTCCGGGGACGCAGACACTGTTCCTGCA...GCTTGCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | GCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCCAGGCGTGGGGGCTCTaGACATGTGATCTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: AELHRHLPIPSACVISTRQAWGL*TCDLLV Trigger: GACAAGAAGATCACATGTGCAGAGCCCCCACGCCTG...GCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CCA 90 bp | GCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCAGCCCAGCCAGGGCCTaGTCCTCCAGTAATTCAATG | + |
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Preference number: 4 (lower is better) Translates to: AELHRHLPIPSACVISTRSPARA*SSSNSM Trigger: CATTGAATTACTGGAGGACCAGGCCCTGGCTGGGCT...GCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR TCA 90 bp | CATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTAGCCATGGGTTCTCTGTaGGGCGTAGCACTTGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: HARSCTDTCQSPVPASLVAMGSL*GVALVG Trigger: GCCTACAAGTGCTACGCCTCACAGAGAACCCATGGC...TACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CCA 90 bp | TGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCTGATGGTGCCCAGTTaGTTCCTGCTGAGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CAELHRHLPIPSACVISTLMVPS*FLLRSS Trigger: ACTGGACCTCAGCAGGAACCAACTGGGCACCATCAG...CGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR TCA 90 bp | GCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTGCAGGTGCAAGAAGGTaGAATCCAGCAGCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACAELHRHLPIPSACVISAGARR*NPAALP Trigger: TGGCAAAGCTGCTGGATTTCACCTTCTTGCACCTGC...ACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | GAGCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGCGATGCTGTTGTCTTaGAGGAACAGTGTCTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: EHARSCTDTCQSPVPASLAMLLS*RNSVCV Trigger: GACGCAGACACTGTTCCTGCAAGACAACAGCATCGC...TAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | CATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTAGCTCCAGGTGCGCGATaGTGTTGTCTTGCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: HARSCTDTCQSPVPASLVAPGAR*CCLAGT Trigger: TGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGC...TACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | CGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCAATGCTACCTGCCTCATaGTGGGGTTCATGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RSCTDTCQSPVPASLVRAMLPAS*WGSCPT Trigger: TGTGGGACATGAACCCCAGCATGAGGCAGGTAGCAT...TGCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR TCA 90 bp | TGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGGCTTGGATCGGTCAATaGCGAACATCTCGTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: CAELHRHLPIPSACVISTAWIGQ*RTSRVH Trigger: ATGGACACGAGATGTTCGTCATTGACCGATCCAAGC...CGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | GAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCAAGGCATTCGTACTTGCCTaGGTGAGCCAGTGTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: ELHRHLPIPSACVISTRKAFVLA*VSQCDV Trigger: AACATCACACTGGCTCACGCAGGCAAGTACGAATGC...CTTGCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR GCA 90 bp | CATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACCTCCAGTAATTCAATaGTGTTTTCTTGAAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: HARSCTDTCQSPVPASLVPPVIQ*CFLEDE Trigger: TTCATCTTCAAGAAAACAGCATTGAATTACTGGAGG...TACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CCA 90 bp | TTCCCGGTGGGACCACGCGCAACCGTAGAGCGCCACACTCCACTGTaGCGCTGTAGCAGCGGCAGGCGGCGGGACAGCCAGTGGCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: FPVGPRATVERHTPL*RCSSGRRRDSQWRG Trigger: CCCGCGCCACTGGCTGTCCCGCCGCCTGCCGCTGCTACAGCGCCACAGTGGAGTGTGGCGCTCTACGGTTGCGCGTGGTCCCACCGGGAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS TCA 90 bp | AGCCCACAAATGCGCCGCCACGCAATCCCCGAAGCCGGTTGCCAGTaGGCGCCAGTTCAAGCAGGCGAGGCTGTGCGCGGAAGGCACCGG | + |
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Preference number: 5 (lower is better) Translates to: SPQMRRHAIPEAGCQ*APVQAGEAVRGRHR Trigger: CCGGTGCCTTCCGCGCACAGCCTCGCCTGCTTGAACTGGCGCTCACTGGCAACCGGCTTCGGGGATTGCGTGGCGGCGCATTTGTGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 90 bp | CCGAAGCCGGTTGCCAGTGAGCGCCAGTTCAAGCAGGCGAGGCTGTaGGCGGAAGGCACCGGACTCCAGCGCACGCAGGGTATTGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: PKPVASERQFKQARL*AEGTGLQRTQGIVV Trigger: CACAACAATACCCTGCGTGCGCTGGAGTCCGGTGCCTTCCGCGCACAGCCTCGCCTGCTTGAACTGGCGCTCACTGGCAACCGGCTTCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 90 bp | CGCAGGCACCTTTTTCCGCCGGCGTCGGCGTCGGCAGATCATAGCTaGCAACAACAGCGCGGTGAGCGCCAGCAGCGCTATGGCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RRHLFPPASASADHS*QQQRGERQQRYGCC Trigger: ACAGCAGCCATAGCGCTGCTGGCGCTCACCGCGCTGTTGTTGGCAGCTATGATCTGCCGACGCCGACGCCGGCGGAAAAAGGTGCCTGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 90 bp | AGAGGTGCCAGGGAGCCTTGCTCCAGGTGCGCGATGCTGTTGTCTTaGAGGAACAGTGTCTGCGTCCCCGGAGGGATTCCCGGTGGGACC | + |
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Preference number: 5 (lower is better) Translates to: RGAREPCSRCAMLLS*RNSVCVPGGIPGGT Trigger: GGTCCCACCGGGAATCCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 90 bp | AGCGCGGTGAGCGCCAGCAGCGCTATGGCTGCTGTGATCGCTGTCTaGGTTGCTAGGCCCAGGGCTCGGAAAGCCATGCTACCTGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SAVSASSAMAAVIAV*VARPRARKAMLPAS Trigger: TGAGGCAGGTAGCATGGCTTTCCGAGCCCTGGGCCTAGCAACGCAGACAGCGATCACAGCAGCCATAGCGCTGCTGGCGCTCACCGCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CAA 90 bp | TTGAGCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATAGGTGCCAGGGAGCCTaGCTCCAGGTGCGCGATGCT | + |
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Preference number: 5 (lower is better) Translates to: LSMRGAAPTPANPQCLRHRCQGA*LQVRDA Trigger: AGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACCT...ATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 90 bp | GCAGGGCAGCAAGAGGTGCCAGGGAGCCTTGCTCCAGGTGCGCGATaGTGTTGTCTTGCAGGAACAGTGTCTGCGTCCCCGGAGGGATTC | + |
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Preference number: 5 (lower is better) Translates to: AGQQEVPGSLAPGAR*CCLAGTVSASPEGF Trigger: GAATCCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACCTCTTGCTGCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CAA 90 bp | GCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCAATCCCCGAAGCCGGTaGCCAGTGAGCGCCAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: ARSCTDTCQSPVPASLVRNPRSR*PVSASS Trigger: TGAACTGGCGCTCACTGGCAACCGGCTTCGGGGATT...GCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 90 bp | GTTTCCAGCCAGGTAAAGCACACGAAGCTGGACCAAGCCCACAAATaGGCCGCCACGCAATCCCCGAAGCCGGTTGCCAGTGAGCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: VSSQVKHTKLDQAHK*AATQSPKPVASERQ Trigger: CTGGCGCTCACTGGCAACCGGCTTCGGGGATTGCGTGGCGGCGCATTTGTGGGCTTGGTCCAGCTTCGTGTGCTTTACCTGGCTGGAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CAA 90 bp | TTGAGCATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATAGCCCATCGGGAGGATaGTGTTCTGGGGCCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LSMRGAAPTPANPQCLRHSPSGG*CSGASS Trigger: TGAGGAGGCCCCAGAACACAATCCTCCCGATGGGCT...ATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATGCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CAA 90 bp | GCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCCGCGATGCTGTTGTCTaGCAGGAACAGTGTCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: AELHRHLPIPSACVISTRRDAVV*QEQCLR Trigger: ACGCAGACACTGTTCCTGCAAGACAACAGCATCGCG...GCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CAA 90 bp | CATGCGCGGAGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTAGCTGATGGTGCCCAGTaGGTTCCTGCTGAGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: HARSCTDTCQSPVPASLVADGAQ*VPAEVQ Trigger: CTGGACCTCAGCAGGAACCAACTGGGCACCATCAGC...TACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCTCCGCGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CCA 90 bp | CCCATCGGGAGGATTGTGTTCTGGGGCCTCCTCAGGCAGTACCTCTaGGAACAGGGGCTTGGATCGGTCAATGACGAACATCTCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PIGRIVFWGLLRQYL*EQGLGSVNDEHLVS Trigger: GGACACGAGATGTTCGTCATTGACCGATCCAAGCCCCTGTTCCCAGAGGTACTGCCTGAGGAGGCCCCAGAACACAATCCTCCCGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS-3UTR CAA 90 bp | AGCTGCACCGACACCTGCCAATCCCCAGTGCCTGCGTCATTAGTACGCGCAAGCAGGTGCGCGATGCTGTaGTCTTGCAGGAACAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SCTDTCQSPVPASLVRASRCAML*SCRNSV Trigger: GACACTGTTCCTGCAAGACAACAGCATCGCGCACCT...GCTTGCGCGTACTAATGACGCAGGCACTGGGGATTGGCAGGTGTCGGTGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS TCA 90 bp | TCAGGTAGCTGCTGTGACTGCTGCCGAGATGCGTTGACCAGTAGATaGAAGGGCACTCGAGCTTTGCCACCTGCATTGGCGGCCTCGCAT | + |
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Preference number: 5 (lower is better) Translates to: SGSCCDCCRDALTSR*KGTRALPPALAASH Trigger: ATGCGAGGCCGCCAATGCAGGTGGCAAAGCTCGAGTGCCCTTTCATCTACTGGTCAACGCATCTCGGCAGCAGTCACAGCAGCTACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS TCA 90 bp | CCTCCTCAGGCAGTACCTCTGGGAACAGGGGCTTGGATCGGTCAATaGCGAACATCTCGTGTCCATGGTCATCACGGAGCTCCTCGAGCT | + |
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Preference number: 5 (lower is better) Translates to: PPQAVPLGTGAWIGQ*RTSRVHGHHGAPRA Trigger: AGCTCGAGGAGCTCCGTGATGACCATGGACACGAGATGTTCGTCATTGACCGATCCAAGCCCCTGTTCCCAGAGGTACTGCCTGAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CCA 90 bp | GGGAACAGGGGCTTGGATCGGTCAATGACGAACATCTCGTGTCCATaGTCATCACGGAGCTCCTCGAGCTGTGCAAAGGTGCAAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GNRGLDRSMTNISCP*SSRSSSSCAKVQGP Trigger: TGGGCCTTGCACCTTTGCACAGCTCGAGGAGCTCCGTGATGACCATGGACACGAGATGTTCGTCATTGACCGATCCAAGCCCCTGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 90 bp | CTAAGGAGGAAAGCCCAGCCAGGGCCTGGTCCTCCAGTAATTCAATaGTGTTTTCTTGAAGATGAAGTTCCTGTAGTCGCGGCAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LRRKAQPGPGPPVIQ*CFLEDEVPVVAAGA Trigger: TGCACCTGCCGCGACTACAGGAACTTCATCTTCAAGAAAACAGCATTGAATTACTGGAGGACCAGGCCCTGGCTGGGCTTTCCTCCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CCA 72 bp | GGACCACGCGCAACCGTAGAGCGCCACACTCCACTGTaGCGCTGTAGCAGCGGCAGGCGGCGGGACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GPRATVERHTPL*RCSSGRRRDSQ Trigger: CTGGCTGTCCCGCCGCCTGCCGCTGCTACAGCGCCACAGTGGAGTGTGGCGCTCTACGGTTGCGCGTGGTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | GTTGCCAGTGAGCGCCAGTTCAAGCAGGCGAGGCTGTaGGCGGAAGGCACCGGACTCCAGCGCACGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: VASERQFKQARL*AEGTGLQRTQG Trigger: ACCCTGCGTGCGCTGGAGTCCGGTGCCTTCCGCGCACAGCCTCGCCTGCTTGAACTGGCGCTCACTGGCAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 90 bp | TGGACCAAGCCCACAAATGCGCCGCCACGCAATCCCCGAAGCCGGTaGCCAGTGAGCGCCAGTTCAAGCAGGCGAGGCTGTGCGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: WTKPTNAPPRNPRSR*PVSASSSRRGCARK Trigger: CTTCCGCGCACAGCCTCGCCTGCTTGAACTGGCGCTCACTGGCAACCGGCTTCGGGGATTGCGTGGCGGCGCATTTGTGGGCTTGGTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | AGGTGCGCGATGCTGTTGTCTTGCAGGAACAGTGTCTaGGTCCCCGGAGGGATTCCCGGTGGGACCACGCGC | + |
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Preference number: 6 (lower is better) Translates to: RCAMLLSCRNSV*VPGGIPGGTTR Trigger: GCGCGTGGTCCCACCGGGAATCCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 72 bp | GGTGCCAGGGAGCCTTGCTCCAGGTGCGCGATGCTGTaGTCTTGCAGGAACAGTGTCTGCGTCCCCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GAREPCSRCAML*SCRNSVCVPGG Trigger: CCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 72 bp | CCCACAAATGCGCCGCCACGCAATCCCCGAAGCCGGTaGCCAGTGAGCGCCAGTTCAAGCAGGCGAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PTNAPPRNPRSR*PVSASSSRRGC Trigger: ACAGCCTCGCCTGCTTGAACTGGCGCTCACTGGCAACCGGCTTCGGGGATTGCGTGGCGGCGCATTTGTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | AGGTGGCGCAGGGCAGCAAGAGGTGCCAGGGAGCCTTaGTCCAGGTGCGCGATGCTGTTGTCTTGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: RWRRAARGAREP*SRCAMLLSCRN Trigger: GTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACCTCTTGCTGCCCTGCGCCACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | CTTTTTCCGCCGGCGTCGGCGTCGGCAGATCATAGCTaGCAACAACAGCGCGGTGAGCGCCAGCAGCGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LFPPASASADHS*QQQRGERQQRY Trigger: ATAGCGCTGCTGGCGCTCACCGCGCTGTTGTTGGCAGCTATGATCTGCCGACGCCGACGCCGGCGGAAAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 72 bp | GAGGTGGCGCAGGGCAGCAAGAGGTGCCAGGGAGCCTaGCTCCAGGTGCGCGATGCTGTTGTCTTGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: EVAQGSKRCQGA*LQVRDAVVLQE Trigger: TTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACCTCTTGCTGCCCTGCGCCACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 90 bp | AAGAGGTGCCAGGGAGCCTTGCTCCAGGTGCGCGATGCTGTTGTCTaGCAGGAACAGTGTCTGCGTCCCCGGAGGGATTCCCGGTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: KRCQGALLQVRDAVV*QEQCLRPRRDSRWD Trigger: GTCCCACCGGGAATCCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACCTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 90 bp | GCAGCAAGAGGTGCCAGGGAGCCTTGCTCCAGGTGCGCGATGCTGTaGTCTTGCAGGAACAGTGTCTGCGTCCCCGGAGGGATTCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: AARGAREPCSRCAML*SCRNSVCVPGGIPG Trigger: ACCGGGAATCCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACCTCTTGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | AGGGAGCCTTGCTCCAGGTGCGCGATGCTGTTGTCTTaGAGGAACAGTGTCTGCGTCCCCGGAGGGATTCCC | + |
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Preference number: 6 (lower is better) Translates to: REPCSRCAMLLS*RNSVCVPGGIP Trigger: GGGAATCCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | CAAGAGGTGCCAGGGAGCCTTGCTCCAGGTGCGCGATaGTGTTGTCTTGCAGGAACAGTGTCTGCGTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: QEVPGSLAPGAR*CCLAGTVSASP Trigger: CGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTGGCACCTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | AGCGCCAGCAGCGCTATGGCTGCTGTGATCGCTGTCTaGGTTGCTAGGCCCAGGGCTCGGAAAGCCATGCTA | + |
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Preference number: 6 (lower is better) Translates to: SASSAMAAVIAV*VARPRARKAML Trigger: TAGCATGGCTTTCCGAGCCCTGGGCCTAGCAACGCAGACAGCGATCACAGCAGCCATAGCGCTGCTGGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 72 bp | CAGGGAGCCTTGCTCCAGGTGCGCGATGCTGTTGTCTaGCAGGAACAGTGTCTGCGTCCCCGGAGGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: QGALLQVRDAVV*QEQCLRPRRDS Trigger: GGAATCCCTCCGGGGACGCAGACACTGTTCCTGCAAGACAACAGCATCGCGCACCTGGAGCAAGGCTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS TCA 72 bp | CCTGCATTGGCGGCCTCGCATTCGTACTTGCCTGCGTaGGCCAGTGTGATGTTGGTGAGGAAGAGCATGCCG | + |
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Preference number: 6 (lower is better) Translates to: PALAASHSYLPA*ASVMLVRKSMP Trigger: CGGCATGCTCTTCCTCACCAACATCACACTGGCTCACGCAGGCAAGTACGAATGCGAGGCCGCCAATGCAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | TCTGTGAGGCGTAGCACTTGTAGGCTGCTCAGAGGCTaGAGGGCCTCCTTGCTGATGGTGCCCAGTTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SVRRSTCRLLRG*RASLLMVPSWF Trigger: GAACCAACTGGGCACCATCAGCAAGGAGGCCCTGCAGCCTCTGAGCAGCCTACAAGTGCTACGCCTCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 72 bp | GGGGCCTCCTCAGGCAGTACCTCTGGGAACAGGGGCTaGGATCGGTCAATGACGAACATCTCGTGTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: GASSGSTSGNRG*DRSMTNISCPW Trigger: CCATGGACACGAGATGTTCGTCATTGACCGATCCAAGCCCCTGTTCCCAGAGGTACTGCCTGAGGAGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | GCCACCTGCATTGGCGGCCTCGCATTCGTACTTGCCTaGGTGAGCCAGTGTGATGTTGGTGAGGAAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ATCIGGLAFVLA*VSQCDVGEEEH Trigger: ATGCTCTTCCTCACCAACATCACACTGGCTCACGCAGGCAAGTACGAATGCGAGGCCGCCAATGCAGGTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CAA 90 bp | TTGTGTTCTGGGGCCTCCTCAGGCAGTACCTCTGGGAACAGGGGCTaGGATCGGTCAATGACGAACATCTCGTGTCCATGGTCATCACGG | + |
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Preference number: 6 (lower is better) Translates to: LCSGASSGSTSGNRG*DRSMTNISCPWSSR Trigger: CCGTGATGACCATGGACACGAGATGTTCGTCATTGACCGATCCAAGCCCCTGTTCCCAGAGGTACTGCCTGAGGAGGCCCCAGAACACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS TCA 72 bp | AGTGAAGGGCACAGTCACAACGCCATGGGTTCTCTGTaGGGCGTAGCACTTGTAGGCTGCTCAGAGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SEGHSHNAMGSL*GVALVGCSEAA Trigger: TGCAGCCTCTGAGCAGCCTACAAGTGCTACGCCTCACAGAGAACCCATGGCGTTGTGACTGTGCCCTTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS TCA 72 bp | TGCTGTGACTGCTGCCGAGATGCGTTGACCAGTAGATaGAAGGGCACTCGAGCTTTGCCACCTGCATTGGCG | + |
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Preference number: 6 (lower is better) Translates to: CCDCCRDALTSR*KGTRALPPALA Trigger: CGCCAATGCAGGTGGCAAAGCTCGAGTGCCCTTTCATCTACTGGTCAACGCATCTCGGCAGCAGTCACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS TCA 72 bp | GCAGTACCTCTGGGAACAGGGGCTTGGATCGGTCAATaGCGAACATCTCGTGTCCATGGTCATCACGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: AVPLGTGAWIGQ*RTSRVHGHHGA Trigger: AGCTCCGTGATGACCATGGACACGAGATGTTCGTCATTGACCGATCCAAGCCCCTGTTCCCAGAGGTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | CTCGTGTCCATGGTCATCACGGAGCTCCTCGAGCTGTaGAAAGGTGCAAGGCCCATCCGAATAATCGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LVSMVITELLEL*KGARPIRIIVD Trigger: GTCAACGATTATTCGGATGGGCCTTGCACCTTTGCACAGCTCGAGGAGCTCCGTGATGACCATGGACACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CCA 72 bp | GGCTTGGATCGGTCAATGACGAACATCTCGTGTCCATaGTCATCACGGAGCTCCTCGAGCTGTGCAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GLDRSMTNISCP*SSRSSSSCAKV Trigger: CACCTTTGCACAGCTCGAGGAGCTCCGTGATGACCATGGACACGAGATGTTCGTCATTGACCGATCCAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS CCA 72 bp | AGGATTGTGTTCTGGGGCCTCCTCAGGCAGTACCTCTaGGAACAGGGGCTTGGATCGGTCAATGACGAACAT | + |
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Preference number: 6 (lower is better) Translates to: RIVFWGLLRQYL*EQGLGSVNDEH Trigger: ATGTTCGTCATTGACCGATCCAAGCCCCTGTTCCCAGAGGTACTGCCTGAGGAGGCCCCAGAACACAATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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| CDS GCA 72 bp | AAAGCCCAGCCAGGGCCTGGTCCTCCAGTAATTCAATaGTGTTTTCTTGAAGATGAAGTTCCTGTAGTCGCG | + |
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Preference number: 6 (lower is better) Translates to: KAQPGPGPPVIQ*CFLEDEVPVVA Trigger: CGCGACTACAGGAACTTCATCTTCAAGAAAACAGCATTGAATTACTGGAGGACCAGGCCCTGGCTGGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049956.5 |
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