Pregenerated sensors for LRRC20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037151Ensembl transcript IDs: ENSMUST00000049242.9
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACGGGGGATGGGGGTGGTGCTGGAGGAGCCATTCCAGTTCAGGCTaGACCCAGCCCTTGCTTGGGCCCTGTGTCTACCTCCTCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: HGGWGWCWRSHSSSG*TQPLLGPCVYLLIW Trigger: CCAGATGAGGAGGTAGACACAGGGCCCAAGCAAGGGCTGGGTGCAGCCTGAACTGGAATGGCTCCTCCAGCACCACCCCCATCCCCCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CCA 90 bp | GTGCTGGAGGAGCCATTCCAGTTCAGGCTGCACCCAGCCCTTGCTTaGGCCCTGTGTCTACCTCCTCATCTGGCTGGCTGGCCTAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: VLEEPFQFRLHPALA*ALCLPPHLAGWPRD Trigger: ATCCCTAGGCCAGCCAGCCAGATGAGGAGGTAGACACAGGGCCCAAGCAAGGGCTGGGTGCAGCCTGAACTGGAATGGCTCCTCCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR GCA 90 bp | GGGATATCCCCAAGCACAGGCCTTAGCAGGGGGCAAGGGCCCAGCTaGCTCCTGGGAAATGCCACAGTTCTGGGCATACTGGGACAGTTG | + |
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Preference number: 1 (lower is better) Translates to: GISPSTGLSRGQGPS*LLGNATVLGILGQL Trigger: CAACTGTCCCAGTATGCCCAGAACTGTGGCATTTCCCAGGAGGCAGCTGGGCCCTTGCCCCCTGCTAAGGCCTGTGCTTGGGGATATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CCA 90 bp | CTCCCAGGGCGGAGCTGGGGGAGGCTGAACATATACTCAGATCTATaGAAGCAAGGAGGAGGGCCAGCCTTCACTCTGCATACACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LPGRSWGRLNIYSDL*KQGGGPAFTLHTPR Trigger: CCTGGGTGTATGCAGAGTGAAGGCTGGCCCTCCTCCTTGCTTCCATAGATCTGAGTATATGTTCAGCCTCCCCCAGCTCCGCCCTGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CCA 90 bp | TGCAGGTGGCTTTGTCTTCTCTGGGCCACCTCTCCTATGGCCCTGTaGGTAATGTCTGACCAGGCCAGGCCATTCTCAGGGAGGGATAGA | + |
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Preference number: 1 (lower is better) Translates to: CRWLCLLWATSPMAL*VMSDQARPFSGRDR Trigger: TCTATCCCTCCCTGAGAATGGCCTGGCCTGGTCAGACATTACCCACAGGGCCATAGGAGAGGTGGCCCAGAGAAGACAAAGCCACCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CCA 90 bp | GGACCTTGGATCCCAGTTATCACATGCAGGTGGCTTTGTCTTCTCTaGGCCACCTCTCCTATGGCCCTGTGGGTAATGTCTGACCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GPWIPVITCRWLCLL*ATSPMALWVMSDQA Trigger: GGCCTGGTCAGACATTACCCACAGGGCCATAGGAGAGGTGGCCCAGAGAAGACAAAGCCACCTGCATGTGATAACTGGGATCCAAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR TCA 90 bp | AAGTATGGGACTTCTTCACACTGTGAGCCTGGATCTGGAGGGTTCTaGCTGCCCAAGCTTGCCCAGACAGGCCAGAACATACTGTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: KYGTSSHCEPGSGGF*LPKLAQTGQNILSR Trigger: CCTAGACAGTATGTTCTGGCCTGTCTGGGCAAGCTTGGGCAGTCAGAACCCTCCAGATCCAGGCTCACAGTGTGAAGAAGTCCCATACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR TCA 90 bp | CAACCAGGTTGTCATCAGAGGGAGGTCACAAGAGGAAGGTCAGGGTaGAGGAGGTCACCTAAGGACCTTGGATCCCAGTTATCACATGCA | + |
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Preference number: 1 (lower is better) Translates to: QPGCHQREVTRGRSG*RRSPKDLGSQLSHA Trigger: TGCATGTGATAACTGGGATCCAAGGTCCTTAGGTGACCTCCTTCACCCTGACCTTCCTCTTGTGACCTCCCTCTGATGACAACCTGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR TCA 90 bp | AGCCTTCACTCTGCATACACCCAGGTTGCCGCCCAGGCCCTCTGCTaGTGCTCAAACTATGACATTCCTGGAAGAAATCAGCTACTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SLHSAYTQVAAQALC*CSNYDIPGRNQLLF Trigger: GAACAGTAGCTGATTTCTTCCAGGAATGTCATAGTTTGAGCATCAGCAGAGGGCCTGGGCGGCAACCTGGGTGTATGCAGAGTGAAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR GCA 90 bp | CGATGTGGAGACAGAACCTCTGAGGGGTCCCAGGCAGGAAAGGCTTaGCACAATTTTTCCTTCTCTCAAGTAACCAAGCTCAGAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: RCGDRTSEGSQAGKA*HNFSFSQVTKLRES Trigger: GCTCTCTCTGAGCTTGGTTACTTGAGAGAAGGAAAAATTGTGGCAAGCCTTTCCTGCCTGGGACCCCTCAGAGGTTCTGTCTCCACATCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CCA 90 bp | CTGAACAACAGTTTGGGTGCTAAAGGCAAAATGTTGGAGACAAAGTaGCCTAGCCCTGCCTGTGTCCTGGGGCCTCCACAGACCTATACA | + |
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Preference number: 1 (lower is better) Translates to: LNNSLGAKGKMLETK*PSPACVLGPPQTYT Trigger: TGTATAGGTCTGTGGAGGCCCCAGGACACAGGCAGGGCTAGGCCACTTTGTCTCCAACATTTTGCCTTTAGCACCCAAACTGTTGTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR GCA 90 bp | GGCATCGGATCCCCCATTACAGATGGTTGTGAGCCACCATGTGATTaGTGGGATTTGAACTCAGGACCTCTGGAAGAACAGTCAGTACTC | + |
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Preference number: 1 (lower is better) Translates to: GIGSPITDGCEPPCD*WDLNSGPLEEQSVL Trigger: GAGTACTGACTGTTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTCACAACCATCTGTAATGGGGGATCCGATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR TCA 90 bp | TCTCAGGTATACACCCCTGGAGGCTGTATTTTTAGCAAGCTGCTGTaGGCCTATCAACACTTAGAGTTGCCAGGCTCTTGCATCCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SQVYTPGGCIFSKLL*AYQHLELPGSCIPL Trigger: AAGAGGGATGCAAGAGCCTGGCAACTCTAAGTGTTGATAGGCTCACAGCAGCTTGCTAAAAATACAGCCTCCAGGGGTGTATACCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CCA 90 bp | ATCGGATCCCCCATTACAGATGGTTGTGAGCCACCATGTGATTGCTaGGATTTGAACTCAGGACCTCTGGAAGAACAGTCAGTACTCTTA | + |
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Preference number: 1 (lower is better) Translates to: IGSPITDGCEPPCDC*DLNSGPLEEQSVLL Trigger: TAAGAGTACTGACTGTTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTCACAACCATCTGTAATGGGGGATCCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR TCA 90 bp | TTCTACTTTCGGAGATCTGGGATTATAAGGGACCATCACCATGTCTaGCACTCTTCTTCTTTTACTTTGTCTGCTTTTGTTGCACTGAGA | + |
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Preference number: 1 (lower is better) Translates to: FYFRRSGIIRDHHHV*HSSSFTLSAFVALR Trigger: TCTCAGTGCAACAAAAGCAGACAAAGTAAAAGAAGAAGAGTGTCAGACATGGTGATGGTCCCTTATAATCCCAGATCTCCGAAAGTAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGGTGGTACTGAGCCAGGGTGAGGCAACCAGGTTGTCATCAGAGGGAGGTCCTCCCTCTGTATGCTaGCTGGCCCACCCACCCCGC | + |
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Preference number: 2 (lower is better) Translates to: RLVVLSQGEATRLSSEGGPPSVC*LAHPPR Trigger: GCGGGGTGGGTGGGCCAGGCAGCATACAGAGGGAGG...ACCTCCCTCTGATGACAACCTGGTTGCCTCACCCTGGCTCAGTACCACCAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTGGAGGAGCCATTCCAGTTCAGGCTGCACCCAGCCCTTGCTTGGGCCCTCCTCATCTGGCTGGCTaGCCTAGGGATGAAAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: GAGGAIPVQAAPSPCLGPPHLAG*PRDESG Trigger: TCCGCTTTCATCCCTAGGCCAGCCAGCCAGATGAGG...AGGGCCCAAGCAAGGGCTGGGTGCAGCCTGAACTGGAATGGCTCCTCCAGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | GTAGAGACACAAAGATGGGGAAACGATCTGAGACACAGGGGTCTCCCAGGGCGGCCCGCTCCCCAAGCTTaGCTTCCCATGGGCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VETQRWGNDLRHRGLPGRPAPQA*LPMGLP Trigger: AGGAAGGCCCATGGGAAGCCAAGCTTGGGGAGCGGG...CCGCCCTGGGAGACCCCTGTGTCTCAGATCGTTTCCCCATCTTTGTGTCTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGTTGCCGCCCAGGCCCTCTGCTGATGCTCAAACTATGACATTCCTGGAACCTCCCTCCTCCCTCTaGAGCACCAGGGCTCACTAC | + |
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Preference number: 2 (lower is better) Translates to: PRLPPRPSADAQTMTFLEPPSSL*STRAHY Trigger: GTAGTGAGCCCTGGTGCTCCAGAGGGAGGAGGGAGG...TTCCAGGAATGTCATAGTTTGAGCATCAGCAGAGGGCCTGGGCGGCAACCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGTTGCCGCCCAGGCCCTCTGCTGATGCTCAAACTATGACATTCCTGGAAGCCCTGCCTGTGTCCTaGGGCCTCCACAGACCTATA | + |
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Preference number: 2 (lower is better) Translates to: PRLPPRPSADAQTMTFLEALPVS*GLHRPI Trigger: TATAGGTCTGTGGAGGCCCCAGGACACAGGCAGGGC...TTCCAGGAATGTCATAGTTTGAGCATCAGCAGAGGGCCTGGGCGGCAACCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CAA 90 bp | TGGAAGCAAGGAGGAGGGCCAGCCTTCACTCTGCATACACCCAGGTaGCCGCCCAGGCCCTCTGCTGATGCTCAAACTATGACATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: WKQGGGPAFTLHTPR*PPRPSADAQTMTFL Trigger: CAGGAATGTCATAGTTTGAGCATCAGCAGAGGGCCTGGGCGGCAACCTGGGTGTATGCAGAGTGAAGGCTGGCCCTCCTCCTTGCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGCGGAGCTGGGGGAGGCTGAACATATACTCAGATCTATGGAAGCAAGGACTAAGCTACCCACCCTaGCTTAGCTGTGCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PGRSWGRLNIYSDLWKQGLSYPP*LSCAPP Trigger: GGGAGGGGCACAGCTAAGCCAGGGTGGGTAGCTTAG...TCCTTGCTTCCATAGATCTGAGTATATGTTCAGCCTCCCCCAGCTCCGCCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CAA 90 bp | ACAGCCTTGAGGTTGGTGGTACTGAGCCAGGGTGAGGCAACCAGGTaGTCATCAGAGGGAGGTCACAAGAGGAAGGTCAGGGTGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TALRLVVLSQGEATR*SSEGGHKRKVRVKE Trigger: CTCCTTCACCCTGACCTTCCTCTTGTGACCTCCCTCTGATGACAACCTGGTTGCCTCACCCTGGCTCAGTACCACCAACCTCAAGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CAA 90 bp | GGTGGGTTTCCGCTGAACAACAGTTTGGGTGCTAAAGGCAAAATGTaGGAGACAAAGTGGCCTAGCCCTGCCTGTGTCCTGGGGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GGFPLNNSLGAKGKM*ETKWPSPACVLGPP Trigger: TGGAGGCCCCAGGACACAGGCAGGGCTAGGCCACTTTGTCTCCAACATTTTGCCTTTAGCACCCAAACTGTTGTTCAGCGGAAACCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CAA 90 bp | GGTCACCTAAGGACCTTGGATCCCAGTTATCACATGCAGGTGGCTTaGTCTTCTCTGGGCCACCTCTCCTATGGCCCTGTGGGTAATGTC | + |
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Preference number: 2 (lower is better) Translates to: GHLRTLDPSYHMQVA*SSLGHLSYGPVGNV Trigger: GACATTACCCACAGGGCCATAGGAGAGGTGGCCCAGAGAAGACAAAGCCACCTGCATGTGATAACTGGGATCCAAGGTCCTTAGGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGTTGCCGCCCAGGCCCTCTGCTGATGCTCAAACTATGACATTCCTGGAACTAAAGGCAAAATGTTaGAGACAAAGTGGCCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: PRLPPRPSADAQTMTFLELKAKC*RQSGLA Trigger: GGCTAGGCCACTTTGTCTCCAACATTTTGCCTTTAG...TTCCAGGAATGTCATAGTTTGAGCATCAGCAGAGGGCCTGGGCGGCAACCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAAGAAATCAGCTACTGTTCTTGCTGGGACAAGAACTAACTCTAACTTTGCACGGGGGATGGGGGTaGTGCTGGAGGAGCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: PGRNQLLFLLGQELTLTLHGGWG*CWRSHS Trigger: GGAATGGCTCCTCCAGCACCACCCCCATCCCCCGTG...CAAAGTTAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CAA 90 bp | CAAAGGTTATCAAGATGGCAGGTCATTATGGTGACAGCCTTGAGGTaGGTGGTACTGAGCCAGGGTGAGGCAACCAGGTTGTCATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QRLSRWQVIMVTALR*VVLSQGEATRLSSE Trigger: CTCTGATGACAACCTGGTTGCCTCACCCTGGCTCAGTACCACCAACCTCAAGGCTGTCACCATAATGACCTGCCATCTTGATAACCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGTTGCCGCCCAGGCCCTCTGCTGATGCTCAAACTATGACATTCCTGGAAAAGTCGATAAATAGGTaGAGGTGGTCTCTCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: PRLPPRPSADAQTMTFLEKSINR*RWSLRM Trigger: CATTCTGAGAGACCACCTCCACCTATTTATCGACTT...TTCCAGGAATGTCATAGTTTGAGCATCAGCAGAGGGCCTGGGCGGCAACCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGCGGAGCTGGGGGAGGCTGAACATATACTCAGATCTATGGAAGCAAGGAGACCATCACCATGTCTaGCACTCTTCTTCTTTTACT | + |
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Preference number: 2 (lower is better) Translates to: PGRSWGRLNIYSDLWKQGDHHHV*HSSSFT Trigger: AGTAAAAGAAGAAGAGTGTCAGACATGGTGATGGTC...TCCTTGCTTCCATAGATCTGAGTATATGTTCAGCCTCCCCCAGCTCCGCCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR TCA 90 bp | GACATTCCTGGAAGAAATCAGCTACTGTTCTTGCTGGGACAAGAACTAACTCTACCTGTGGGTAATGTCTaGCCAGGCCAGGCCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: DIPGRNQLLFLLGQELTLPVGNV*PGQAIL Trigger: GAGAATGGCCTGGCCTGGTCAGACATTACCCACAGG...TAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGGAATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCAAGGTTTCTTTTAGGATACACAGCCATGATACCAGCAGTGCTCCCATGTTCCTCCTCTCAGGGTaGCAGGCCAGTATCCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: IGKVSFRIHSHDTSSAPMFLLSG*QASILC Trigger: ACAAAGGATACTGGCCTGCCACCCTGAGAGGAGGAA...CATGGGAGCACTGCTGGTATCATGGCTGTGTATCCTAAAAGAAACCTTGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTGCAGACTGAAGTATGGGACTTCTTCACACTGTGAGCCTGGATCTGGATCTCCTATGGCCCTGTaGGTAATGTCTGACCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: FYCRLKYGTSSHCEPGSGSPMAL*VMSDQA Trigger: GGCCTGGTCAGACATTACCCACAGGGCCATAGGAGA...TCCAGATCCAGGCTCACAGTGTGAAGAAGTCCCATACTTCAGTCTGCAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR TCA 90 bp | CACTGTCTTCAGACACACCAGAAGAAGGCATCGGATCCCCCATTACAGATGGTTTTTAGCAAGCTGCTGTaGGCCTATCAACACTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: HCLQTHQKKASDPPLQMVFSKLL*AYQHLE Trigger: CTCTAAGTGTTGATAGGCTCACAGCAGCTTGCTAAA...AACCATCTGTAATGGGGGATCCGATGCCTTCTTCTGGTGTGTCTGAAGACAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTGCAGACTGAAGTATGGGACTTCTTCACACTGTGAGCCTGGATCTGGACTGCCTCCTGGGAAATaGCACAGTTCTGGGCATACT | + |
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Preference number: 2 (lower is better) Translates to: FYCRLKYGTSSHCEPGSGLPPGK*HSSGHT Trigger: AGTATGCCCAGAACTGTGGCATTTCCCAGGAGGCAG...TCCAGATCCAGGCTCACAGTGTGAAGAAGTCCCATACTTCAGTCTGCAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR TCA 90 bp | GACATTCCTGGAAGAAATCAGCTACTGTTCTTGCTGGGACAAGAACTAACTCTACAGGACAAGGAAGAATaGGCTGGCCAGATGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DIPGRNQLLFLLGQELTLQDKEE*AGQMSV Trigger: CACAGACATCTGGCCAGCTCATTCTTCCTTGTCCTG...TAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGGAATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR GCA 90 bp | GACATTCCTGGAAGAAATCAGCTACTGTTCTTGCTGGGACAAGAACTAACTCTAGAGTTGCCAGGCTCTTaGATCCCTCTTCCTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: DIPGRNQLLFLLGQELTLELPGS*IPLPLQ Trigger: TTGTAAAGGAAGAGGGATGCAAGAGCCTGGCAACTC...TAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGGAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR GCA 90 bp | GACATTCCTGGAAGAAATCAGCTACTGTTCTTGCTGGGACAAGAACTAACTCTAGAGCCACCATGTGATTaGTGGGATTTGAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DIPGRNQLLFLLGQELTLEPPCD*WDLNSG Trigger: TCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTC...TAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGGAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTGCAGACTGAAGTATGGGACTTCTTCACACTGTGAGCCTGGATCTGGAGTAGAGACACAAAGATaGGGAAACGATCTGAGACAC | + |
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Preference number: 2 (lower is better) Translates to: FYCRLKYGTSSHCEPGSGVETQR*GNDLRH Trigger: GTGTCTCAGATCGTTTCCCCATCTTTGTGTCTCTAC...TCCAGATCCAGGCTCACAGTGTGAAGAAGTCCCATACTTCAGTCTGCAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAAGAAATCAGCTACTGTTCTTGCTGGGACAAGAACTAACTCTAACTTTGCAGGCAGGAAAGGCTTaGCACAATTTTTCCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PGRNQLLFLLGQELTLTLQAGKA*HNFSFS Trigger: AGAGAAGGAAAAATTGTGGCAAGCCTTTCCTGCCTG...CAAAGTTAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR GCA 72 bp | TGGGGGTGGTGCTGGAGGAGCCATTCCAGTTCAGGCTaGACCCAGCCCTTGCTTGGGCCCTGTGTCTACCTC | + |
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Preference number: 3 (lower is better) Translates to: WGWCWRSHSSSG*TQPLLGPCVYL Trigger: GAGGTAGACACAGGGCCCAAGCAAGGGCTGGGTGCAGCCTGAACTGGAATGGCTCCTCCAGCACCACCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGGTGGTACTGAGCCAGGGTGAGGCAACCAGGTTGTCATCAGAGGGAGGTCCCCGCTCCCCAAGCTaGGCTTCCCATGGGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: RLVVLSQGEATRLSSEGGPRSPS*ASHGPS Trigger: GGAAGGCCCATGGGAAGCCAAGCTTGGGGAGCGGGG...ACCTCCCTCTGATGACAACCTGGTTGCCTCACCCTGGCTCAGTACCACCAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR GCA 72 bp | GGAGGAGCCATTCCAGTTCAGGCTGCACCCAGCCCTTaGTTGGGCCCTGTGTCTACCTCCTCATCTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GGAIPVQAAPSP*LGPVSTSSSGW Trigger: CCAGCCAGATGAGGAGGTAGACACAGGGCCCAAGCAAGGGCTGGGTGCAGCCTGAACTGGAATGGCTCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CCA 72 bp | GCTGCCTCCTGGGAAATGCCACAGTTCTGGGCATACTaGGACAGTTGGTGGCCCCTTAGGCCACAGGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: AASWEMPQFWAY*DSWWPLRPQAK Trigger: CTTTGCCTGTGGCCTAAGGGGCCACCAACTGTCCCAGTATGCCCAGAACTGTGGCATTTCCCAGGAGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR-3UTR CAA 90 bp | GTAGAGACACAAAGATGGGGAAACGATCTGAGACACAGGGGTCTCCCAGGGCGGGGTGAGGCAACCAGGTaGTCATCAGAGGGAGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: VETQRWGNDLRHRGLPGRGEATR*SSEGGH Trigger: GTGACCTCCCTCTGATGACAACCTGGTTGCCTCACC...CCGCCCTGGGAGACCCCTGTGTCTCAGATCGTTTCCCCATCTTTGTGTCTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR TCA 72 bp | GACACAGGGGTCTCCCAGGGCGGAGCTGGGGGAGGCTaGACATATACTCAGATCTATGGAAGCAAGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: DTGVSQGGAGGG*TYTQIYGSKEE Trigger: CTCCTCCTTGCTTCCATAGATCTGAGTATATGTTCAGCCTCCCCCAGCTCCGCCCTGGGAGACCCCTGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| 3UTR CCA 72 bp | CTTTGTCTTCTCTGGGCCACCTCTCCTATGGCCCTGTaGGTAATGTCTGACCAGGCCAGGCCATTCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LCLLWATSPMAL*VMSDQARPFSG Trigger: CCCTGAGAATGGCCTGGCCTGGTCAGACATTACCCACAGGGCCATAGGAGAGGTGGCCCAGAGAAGACAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCTGGGGCCTCCACAGACCTATACAAAGGTGTAGACCAGCCAGGACCGGGCCAGGCAGGAAAGGCTaGCCACAATTTTTCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSWGLHRPIQRCRPARTGPGRKG*PQFFLL Trigger: GAGAAGGAAAAATTGTGGCAAGCCTTTCCTGCCTGG...CCCGGTCCTGGCTGGTCTACACCTTTGTATAGGTCTGTGGAGGCCCCAGGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTGGCCTAGAACTCCTGACCTTCCTGCTTCTACTTTCGGAGATCTGGGATGCACCCAGCCCTTGCTaGGGCCCTGTGTCTACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KVGLELLTFLLLLSEIWDAPSPC*GPVSTS Trigger: GGAGGTAGACACAGGGCCCAAGCAAGGGCTGGGTGC...ATCCCAGATCTCCGAAAGTAGAAGCAGGAAGGTCAGGAGTTCTAGGCCAACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR TCA 72 bp | GGTGACAGCCTTGAGGTTGGTGGTACTGAGCCAGGGTaGGGCAACCAGGTTGTCATCAGAGGGAGGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GDSLEVGGTEPG*GNQVVIRGRSQ Trigger: TTGTGACCTCCCTCTGATGACAACCTGGTTGCCTCACCCTGGCTCAGTACCACCAACCTCAAGGCTGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CCA 72 bp | TGTTGGAGACAAAGTGGCCTAGCCCTGCCTGTGTCCTaGGGCCTCCACAGACCTATACAAAGGTGTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: CWRQSGLALPVS*GLHRPIQRCRP Trigger: TGGTCTACACCTTTGTATAGGTCTGTGGAGGCCCCAGGACACAGGCAGGGCTAGGCCACTTTGTCTCCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CCA 72 bp | AGTTTGGGTGCTAAAGGCAAAATGTTGGAGACAAAGTaGCCTAGCCCTGCCTGTGTCCTGGGGCCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SLGAKGKMLETK*PSPACVLGPPQ Trigger: CTGTGGAGGCCCCAGGACACAGGCAGGGCTAGGCCACTTTGTCTCCAACATTTTGCCTTTAGCACCCAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CCA 72 bp | AACGATCTGAGACACAGGGGTCTCCCAGGGCGGAGCTaGGGGAGGCTGAACATATACTCAGATCTATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NDLRHRGLPGRS*GRLNIYSDLWK Trigger: CTTCCATAGATCTGAGTATATGTTCAGCCTCCCCCAGCTCCGCCCTGGGAGACCCCTGTGTCTCAGATCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR TCA 72 bp | ACTTCTTCACACTGTGAGCCTGGATCTGGAGGGTTCTaGCTGCCCAAGCTTGCCCAGACAGGCCAGAACATA | + |
|
Preference number: 3 (lower is better) Translates to: TSSHCEPGSGGF*LPKLAQTGQNI Trigger: TATGTTCTGGCCTGTCTGGGCAAGCTTGGGCAGTCAGAACCCTCCAGATCCAGGCTCACAGTGTGAAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CCA 72 bp | GGTGGCCCCTTAGGCCACAGGCAAAGGTTATCAAGATaGCAGGTCATTATGGTGACAGCCTTGAGGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GGPLGHRQRLSR*QVIMVTALRLV Trigger: CACCAACCTCAAGGCTGTCACCATAATGACCTGCCATCTTGATAACCTTTGCCTGTGGCCTAAGGGGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGCGGAGCTGGGGGAGGCTGAACATATACTCAGATCTATGGAAGCAAGGAAGAGTTGCCAGGCTCTaGCATCCCTCTTCCTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: PGRSWGRLNIYSDLWKQGRVARL*HPSSFT Trigger: TGTAAAGGAAGAGGGATGCAAGAGCCTGGCAACTCT...TCCTTGCTTCCATAGATCTGAGTATATGTTCAGCCTCCCCCAGCTCCGCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAGAGACACAAAGATGGGGAAACGATCTGAGACACAGGGGTCTCCCAGGGCGGTGTGATTGCTGGGATTaGAACTCAGGACCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VETQRWGNDLRHRGLPGRCDCWD*NSGPLE Trigger: TTCCAGAGGTCCTGAGTTCAAATCCCAGCAATCACA...CCGCCCTGGGAGACCCCTGTGTCTCAGATCGTTTCCCCATCTTTGTGTCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR TCA 72 bp | TGTCATCAGAGGGAGGTCACAAGAGGAAGGTCAGGGTaGAGGAGGTCACCTAAGGACCTTGGATCCCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CHQREVTRGRSG*RRSPKDLGSQL Trigger: TAACTGGGATCCAAGGTCCTTAGGTGACCTCCTTCACCCTGACCTTCCTCTTGTGACCTCCCTCTGATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR TCA 72 bp | TCTGCATACACCCAGGTTGCCGCCCAGGCCCTCTGCTaGTGCTCAAACTATGACATTCCTGGAAGAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SAYTQVAAQALC*CSNYDIPGRNQ Trigger: CTGATTTCTTCCAGGAATGTCATAGTTTGAGCATCAGCAGAGGGCCTGGGCGGCAACCTGGGTGTATGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CCA 72 bp | ATCCCAGTTATCACATGCAGGTGGCTTTGTCTTCTCTaGGCCACCTCTCCTATGGCCCTGTGGGTAATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IPVITCRWLCLL*ATSPMALWVMS Trigger: AGACATTACCCACAGGGCCATAGGAGAGGTGGCCCAGAGAAGACAAAGCCACCTGCATGTGATAACTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CCA 72 bp | CTCCAGCCCCCGGGATTATTTAGTCTAGGCCAAGGTTaGCCTAGAACTCCTGACCTTCCTGCTTCTACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LQPPGLFSLGQG*PRTPDLPASTF Trigger: GAAAGTAGAAGCAGGAAGGTCAGGAGTTCTAGGCCAACCTTGGCCTAGACTAAATAATCCCGGGGGCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGCGGAGCTGGGGGAGGCTGAACATATACTCAGATCTATGGAAGCAAGGATATCAACACTTAGAGTaGCCAGGCTCTTGCATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGRSWGRLNIYSDLWKQGYQHLE*PGSCIP Trigger: AGGGATGCAAGAGCCTGGCAACTCTAAGTGTTGATA...TCCTTGCTTCCATAGATCTGAGTATATGTTCAGCCTCCCCCAGCTCCGCCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR GCA 72 bp | GACAGAACCTCTGAGGGGTCCCAGGCAGGAAAGGCTTaGCACAATTTTTCCTTCTCTCAAGTAACCAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DRTSEGSQAGKA*HNFSFSQVTKL Trigger: GAGCTTGGTTACTTGAGAGAAGGAAAAATTGTGGCAAGCCTTTCCTGCCTGGGACCCCTCAGAGGTTCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR TCA 72 bp | TTATTGCAGACTGAAGTATGGGACTTCTTCACACTGTaGGCCTGGATCTGGAGGGTTCTGACTGCCCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLQTEVWDFFTL*AWIWRVLTAQA Trigger: AGCTTGGGCAGTCAGAACCCTCCAGATCCAGGCTCACAGTGTGAAGAAGTCCCATACTTCAGTCTGCAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR GCA 72 bp | TCCCCCATTACAGATGGTTGTGAGCCACCATGTGATTaGTGGGATTTGAACTCAGGACCTCTGGAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SPITDGCEPPCD*WDLNSGPLEEQ Trigger: CTGTTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTCACAACCATCTGTAATGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CCA 72 bp | CCTTCACACAATGTCTCAGGACAAGGAAGAATGAGCTaGCCAGATGTCTGTGGGGTTCTTCATAAATGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PSHNVSGQGRMS*PDVCGVLHKCS Trigger: GGAGCATTTATGAAGAACCCCACAGACATCTGGCCAGCTCATTCTTCCTTGTCCTGAGACATTGTGTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGCAAGGTTTCTTTTAGGATACACAGCCATGATACCAGCAGTGCTCCCATGGCTAAAGGCAAAATGTaGGAGACAAAGTGGCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: IGKVSFRIHSHDTSSAPMAKGKM*ETKWPS Trigger: GCTAGGCCACTTTGTCTCCAACATTTTGCCTTTAGC...CATGGGAGCACTGCTGGTATCATGGCTGTGTATCCTAAAAGAAACCTTGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR TCA 72 bp | AAAGTCCTTCACACAATGTCTCAGGACAAGGAAGAATaGGCTGGCCAGATGTCTGTGGGGTTCTTCATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KVLHTMSQDKEE*AGQMSVGFFIN Trigger: ATTTATGAAGAACCCCACAGACATCTGGCCAGCTCATTCTTCCTTGTCCTGAGACATTGTGTGAAGGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CCA 90 bp | CCATGGGCCTTCCTCCTCTCAGGGTGGCAGGCCAGTATCCTTTGTCCCTTGCTGCCTTCCTCGCAACTCTaGCCACGGCCTCCCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PWAFLLSGWQASILCPLLPSSQL*PRPPPS Trigger: AGATGGGGGAGGCCGTGGCCAGAGTTGCGAGGAAGG...CAGCAAGGGACAAAGGATACTGGCCTGCCACCCTGAGAGGAGGAAGGCCCATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | TGGAGGAGCCATTCCAGTTCAGGCTGCACCCAGCCCTaGCTTGGGCCCTGTGTCTACCTCCTCATCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRSHSSSGCTQP*LGPCVYLLIWL Trigger: CAGCCAGATGAGGAGGTAGACACAGGGCCCAAGCAAGGGCTGGGTGCAGCCTGAACTGGAATGGCTCCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | GGAGGAGGGCCAGCCTTCACTCTGCATACACCCAGGTaGCCGCCCAGGCCCTCTGCTGATGCTCAAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: GGGPAFTLHTPR*PPRPSADAQTM Trigger: CATAGTTTGAGCATCAGCAGAGGGCCTGGGCGGCAACCTGGGTGTATGCAGAGTGAAGGCTGGCCCTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CCA 90 bp | CCATGGGCCTTCCTCCTCTCAGGGTGGCAGGCCAGTATCCTTTGTCCCTTGCTGCCAGTGCAGGCAAGGTaGTCAGCTGCTCTGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PWAFLLSGWQASILCPLLPVQAR*SAALGS Trigger: ACTTCCCAGAGCAGCTGACCACCTTGCCTGCACTGG...CAGCAAGGGACAAAGGATACTGGCCTGCCACCCTGAGAGGAGGAAGGCCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCTGGAGGAGCCATTCCAGTTCAGGCTGCACCCAGCCCTTGCTTGGGCCCTTTTCCACAGTCTCATTaGCCTTCCTCGCAACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAGGAIPVQAAPSPCLGPFPQSH*PSSQLW Trigger: CCAGAGTTGCGAGGAAGGTCAATGAGACTGTGGAAA...AGGGCCCAAGCAAGGGCTGGGTGCAGCCTGAACTGGAATGGCTCCTCCAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR GCA 90 bp | GTAGAGACACAAAGATGGGGAAACGATCTGAGACACAGGGGTCTCCCAGGGCGGATGGCCCTGAGGTGCTaGAGGCTGCTGACCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VETQRWGNDLRHRGLPGRMALRC*RLLTSL Trigger: CAATGAGGTCAGCAGCCTGCAGCACCTCAGGGCCAT...CCGCCCTGGGAGACCCCTGTGTCTCAGATCGTTTCCCCATCTTTGTGTCTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | AGGACCTTGGATCCCAGTTATCACATGCAGGTGGCTTaGTCTTCTCTGGGCCACCTCTCCTATGGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLDPSYHMQVA*SSLGHLSYGPV Trigger: CACAGGGCCATAGGAGAGGTGGCCCAGAGAAGACAAAGCCACCTGCATGTGATAACTGGGATCCAAGGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | GAGGAAGGTCAGGGTGAAGGAGGTCACCTAAGGACCTaGGATCCCAGTTATCACATGCAGGTGGCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEGQGEGGHLRT*DPSYHMQVALS Trigger: AGACAAAGCCACCTGCATGTGATAACTGGGATCCAAGGTCCTTAGGTGACCTCCTTCACCCTGACCTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | AGGTTATCAAGATGGCAGGTCATTATGGTGACAGCCTaGAGGTTGGTGGTACTGAGCCAGGGTGAGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RLSRWQVIMVTA*RLVVLSQGEAT Trigger: GGTTGCCTCACCCTGGCTCAGTACCACCAACCTCAAGGCTGTCACCATAATGACCTGCCATCTTGATAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | CCGCTGAACAACAGTTTGGGTGCTAAAGGCAAAATGTaGGAGACAAAGTGGCCTAGCCCTGCCTGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLNNSLGAKGKM*ETKWPSPACVL Trigger: CAGGACACAGGCAGGGCTAGGCCACTTTGTCTCCAACATTTTGCCTTTAGCACCCAAACTGTTGTTCAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTAAGGTCTGAGACCCTGCATTTTAGCTTCCTCTTTACTGAGATGGAACTGGGTGCTGCAGGCTGCTaGCCTCATTGGGGAGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVRSETLHFSFLFTEMELGAAGC*PHWGVE Trigger: TTCGACTCCCCAATGAGGTCAGCAGCCTGCAGCACC...CAGTTCCATCTCAGTAAAGAGGAAGCTAAAATGCAGGGTCTCAGACCTTACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CCA 90 bp | GACATTCCTGGAAGAAATCAGCTACTGTTCTTGCTGGGACAAGAACTAACTCTACTCGCAGAGCTGGCATaGCAGCCAGCTTCTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: DIPGRNQLLFLLGQELTLLAELA*QPASPP Trigger: CGGTGGAGAAGCTGGCTGCCATGCCAGCTCTGCGAG...TAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGGAATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAAGGTTTCTTTTAGGATACACAGCCATGATACCAGCAGTGCTCCCATGGATGACTCGCAGAGCTaGCATGGCAGCCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGKVSFRIHSHDTSSAPMDDSQS*HGSQLL Trigger: GAGAAGCTGGCTGCCATGCCAGCTCTGCGAGTCATC...CATGGGAGCACTGCTGGTATCATGGCTGTGTATCCTAAAAGAAACCTTGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR GCA 90 bp | GTGATCACTATCTCCACCGTTGTAGAGACACAAAGATGGGGAAACGATCTGAGAGGAAAGAAACAAGCTTaGAGTCGGCCAGGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VITISTVVETQRWGNDLRGKKQA*SRPGPG Trigger: CCCTGGACCTGGCCGACTGCAAGCTTGTTTCTTTCC...TCTCAGATCGTTTCCCCATCTTTGTGTCTCTACAACGGTGGAGATAGTGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR TCA 90 bp | TTTTATTGCAGACTGAAGTATGGGACTTCTTCACACTGTGAGCCTGGATCTGGATGCTCTGGGAAGTCTTaGAACTGGTTCCGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYCRLKYGTSSHCEPGSGCSGKS*NWFRDR Trigger: CCTGTCCCGGAACCAGTTTCAAGACTTCCCAGAGCA...TCCAGATCCAGGCTCACAGTGTGAAGAAGTCCCATACTTCAGTCTGCAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CCA 90 bp | GTGATCACTATCTCCACCGTTGTAGAGACACAAAGATGGGGAAACGATCTGAGAAAACTTGATGAGCGGTaGGGCAATCACACGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: VITISTVVETQRWGNDLRKLDER*GNHTHV Trigger: GACGTGCGTGTGATTGCCCCACCGCTCATCAAGTTT...TCTCAGATCGTTTCCCCATCTTTGTGTCTCTACAACGGTGGAGATAGTGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | GACAAACTCCGTGGTGGGTTTCCGCTGAACAACAGTTaGGGTGCTAAAGGCAAAATGTTGGAGACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DKLRGGFPLNNS*GAKGKMLETKW Trigger: CCACTTTGTCTCCAACATTTTGCCTTTAGCACCCAAACTGTTGTTCAGCGGAAACCCACCACGGAGTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGATTGCTGGGATTaGAACTCAGGACCTCTGGAAGAACAGTCAGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCDCWD*NSGPLEEQSVL Trigger: GAGTACTGACTGTTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTCACAACCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CCA 90 bp | GACATTCCTGGAAGAAATCAGCTACTGTTCTTGCTGGGACAAGAACTAACTCTAGGTGGTCAGCTGCTCTaGGAAGTCTTGAAACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DIPGRNQLLFLLGQELTLGGQLL*EVLKLV Trigger: AACCAGTTTCAAGACTTCCCAGAGCAGCTGACCACC...TAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGGAATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR GCA 90 bp | TTTTATTGCAGACTGAAGTATGGGACTTCTTCACACTGTGAGCCTGGATCTGGATCAGGACCTTGTAGATaGAGATGGGGAAAGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FYCRLKYGTSSHCEPGSGSGPCR*RWGKKQ Trigger: TTGTTTCTTTCCCCATCTGCATCTACAAGGTCCTGA...TCCAGATCCAGGCTCACAGTGTGAAGAAGTCCCATACTTCAGTCTGCAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| 3UTR CAA 72 bp | AACTATGACATTCCTGGAAGAAATCAGCTACTGTTCTaGCTGGGACAAGAACTAACTCTAACTTTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYDIPGRNQLLF*LGQELTLTLKA Trigger: GGCCTTCAAAGTTAGAGTTAGTTCTTGTCCCAGCAAGAACAGTAGCTGATTTCTTCCAGGAATGTCATAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS TCA 90 bp | AGTCGGCCAGGTCCAGGGTATCTGAGCCGCTTTCCACAGTCTCATTaGCCTTCCTCGCAACTCTGGCCACGGCCTCCCCCATCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRPGPGYLSRFPQSH*PSSQLWPRPPPSSS Trigger: TGAGGAAGATGGGGGAGGCCGTGGCCAGAGTTGCGAGGAAGGTCAATGAGACTGTGGAAAGCGGCTCAGATACCCTGGACCTGGCCGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS CCA 90 bp | CCGCGTATCCTCTGGAGACATGAGCATATCAAACTTGATGAGCGGTaGGGCAATCACACGCACGTCGGCGCTCAGGGGGTTGAGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRILWRHEHIKLDER*GNHTHVGAQGVEAQ Trigger: CTGCGCCTCAACCCCCTGAGCGCCGACGTGCGTGTGATTGCCCCACCGCTCATCAAGTTTGATATGCTCATGTCTCCAGAGGATACGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCTGGAGGAGCCATTCCAGTTCAGGCTGCACCCAGCCCTTGCTTGGGCCCTAAGGTGGTCATGAACTaGCTGGTGAGGGACTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAGGAIPVQAAPSPCLGPKVVMN*LVRDLS Trigger: ACTCAAGTCCCTCACCAGCAAGTTCATGACCACCTT...AGGGCCCAAGCAAGGGCTGGGTGCAGCCTGAACTGGAATGGCTCCTCCAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS CCA 90 bp | CTCCAGGTTGATAGTCTCCAGTGCAGGCAAGGTGGTCAGCTGCTCTaGGAAGTCTTGAAACTGGTTCCGGGACAGGTCAATGGCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQVDSLQCRQGGQLL*EVLKLVPGQVNGPE Trigger: CTCAGGGCCATTGACCTGTCCCGGAACCAGTTTCAAGACTTCCCAGAGCAGCTGACCACCTTGCCTGCACTGGAGACTATCAACCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTGGTGGTACTGAGCCAGGGTGAGGCAACCAGGTTGTCATCAGAGGGAGGTCTGCTCTGGGAAGTCTaGAAACTGGTTCCGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: RLVVLSQGEATRLSSEGGLLWEV*KLVPGQ Trigger: CTGTCCCGGAACCAGTTTCAAGACTTCCCAGAGCAG...ACCTCCCTCTGATGACAACCTGGTTGCCTCACCCTGGCTCAGTACCACCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS-3UTR CAA 90 bp | GTAGAGACACAAAGATGGGGAAACGATCTGAGACACAGGGGTCTCCCAGGGCGGTCATTCTCCTCCAGGTaGATAGTCTCCAGTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VETQRWGNDLRHRGLPGRSFSSR*IVSSAG Trigger: GCCTGCACTGGAGACTATCAACCTGGAGGAGAATGA...CCGCCCTGGGAGACCCCTGTGTCTCAGATCGTTTCCCCATCTTTGTGTCTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
||
| CDS GCA 90 bp | CGTTCCTCAGGACCTTGTAGATGCAGATGGGGAAAGAAACAAGCTTaGAGTCGGCCAGGTCCAGGGTATCTGAGCCGCTTTCCACAGTCT | + |
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Preference number: 5 (lower is better) Translates to: RSSGPCRCRWGKKQA*SRPGPGYLSRFPQS Trigger: AGACTGTGGAAAGCGGCTCAGATACCCTGGACCTGGCCGACTGCAAGCTTGTTTCTTTCCCCATCTGCATCTACAAGGTCCTGAGGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CCA 90 bp | GATGGATCTGATCAGAGACGTTCCTCAGGACCTTGTAGATGCAGATaGGGAAAGAAACAAGCTTGCAGTCGGCCAGGTCCAGGGTATCTG | + |
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Preference number: 5 (lower is better) Translates to: DGSDQRRSSGPCRCR*GKKQACSRPGPGYL Trigger: CAGATACCCTGGACCTGGCCGACTGCAAGCTTGTTTCTTTCCCCATCTGCATCTACAAGGTCCTGAGGAACGTCTCTGATCAGATCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS GCA 90 bp | CGGAACATCCACTATCTCATTCTCCTCCAGGTTGATAGTCTCCAGTaGAGGCAAGGTGGTCAGCTGCTCTGGGAAGTCTTGAAACTGGTT | + |
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Preference number: 5 (lower is better) Translates to: RNIHYLILLQVDSLQ*RQGGQLLWEVLKLV Trigger: AACCAGTTTCAAGACTTCCCAGAGCAGCTGACCACCTTGCCTGCACTGGAGACTATCAACCTGGAGGAGAATGAGATAGTGGATGTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS-3UTR CAA 90 bp | GTGATCACTATCTCCACCGTTGTAGAGACACAAAGATGGGGAAACGATCTGAGAGGGAAAGAAACAAGCTaGCAGTCGGCCAGGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VITISTVVETQRWGNDLRGKETS*QSARSR Trigger: CCTGGACCTGGCCGACTGCAAGCTTGTTTCTTTCCC...TCTCAGATCGTTTCCCCATCTTTGTGTCTCTACAACGGTGGAGATAGTGATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS-3UTR CAA 90 bp | AGTGTAAGGTCTGAGACCCTGCATTTTAGCTTCCTCTTTACTGAGATGGAACTGTTGCTGGTGAGGGACTaGAGTTCATTGTTAGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SVRSETLHFSFLFTEMELLLVRD*SSLLAS Trigger: GCTGGCTAACAATGAACTCAAGTCCCTCACCAGCAA...CAGTTCCATCTCAGTAAAGAGGAAGCTAAAATGCAGGGTCTCAGACCTTACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 90 bp | GGGGCAATCACACGCACGTCGGCGCTCAGGGGGTTGAGGCGCAGGTaGATGACTCGCAGAGCTGGCATGGCAGCCAGCTTCTCCACCGGA | + |
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Preference number: 6 (lower is better) Translates to: GAITRTSALRGLRRR*MTRRAGMAASFSTG Trigger: TCCGGTGGAGAAGCTGGCTGCCATGCCAGCTCTGCGAGTCATCAACCTGCGCCTCAACCCCCTGAGCGCCGACGTGCGTGTGATTGCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 72 bp | ACACGCACGTCGGCGCTCAGGGGGTTGAGGCGCAGGTaGATGACTCGCAGAGCTGGCATGGCAGCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TRTSALRGLRRR*MTRRAGMAASF Trigger: GAAGCTGGCTGCCATGCCAGCTCTGCGAGTCATCAACCTGCGCCTCAACCCCCTGAGCGCCGACGTGCGTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 90 bp | TTGATGAGCGGTGGGGCAATCACACGCACGTCGGCGCTCAGGGGGTaGAGGCGCAGGTTGATGACTCGCAGAGCTGGCATGGCAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LMSGGAITRTSALRG*RRRLMTRRAGMAAS Trigger: GCTGGCTGCCATGCCAGCTCTGCGAGTCATCAACCTGCGCCTCAACCCCCTGAGCGCCGACGTGCGTGTGATTGCCCCACCGCTCATCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 90 bp | GGCGGAGGGGCCCGCGTATCCTCTGGAGACATGAGCATATCAAACTaGATGAGCGGTGGGGCAATCACACGCACGTCGGCGCTCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GGGARVSSGDMSISN*MSGGAITRTSALRG Trigger: CCCCCTGAGCGCCGACGTGCGTGTGATTGCCCCACCGCTCATCAAGTTTGATATGCTCATGTCTCCAGAGGATACGCGGGCCCCTCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 90 bp | CAGTCGGCCAGGTCCAGGGTATCTGAGCCGCTTTCCACAGTCTCATaGACCTTCCTCGCAACTCTGGCCACGGCCTCCCCCATCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QSARSRVSEPLSTVS*TFLATLATASPIFL Trigger: GAGGAAGATGGGGGAGGCCGTGGCCAGAGTTGCGAGGAAGGTCAATGAGACTGTGGAAAGCGGCTCAGATACCCTGGACCTGGCCGACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS TCA 72 bp | GGTCCAGGGTATCTGAGCCGCTTTCCACAGTCTCATTaGCCTTCCTCGCAACTCTGGCCACGGCCTCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GPGYLSRFPQSH*PSSQLWPRPPP Trigger: TGGGGGAGGCCGTGGCCAGAGTTGCGAGGAAGGTCAATGAGACTGTGGAAAGCGGCTCAGATACCCTGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 72 bp | AGGTCCAGGGTATCTGAGCCGCTTTCCACAGTCTCATaGACCTTCCTCGCAACTCTGGCCACGGCCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: RSRVSEPLSTVS*TFLATLATASP Trigger: GGGGGAGGCCGTGGCCAGAGTTGCGAGGAAGGTCAATGAGACTGTGGAAAGCGGCTCAGATACCCTGGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS TCA 72 bp | AGTGCAGGCAAGGTGGTCAGCTGCTCTGGGAAGTCTTaGAACTGGTTCCGGGACAGGTCAATGGCCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SAGKVVSCSGKS*NWFRDRSMALR Trigger: CCTCAGGGCCATTGACCTGTCCCGGAACCAGTTTCAAGACTTCCCAGAGCAGCTGACCACCTTGCCTGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 72 bp | CAGTGCAGGCAAGGTGGTCAGCTGCTCTGGGAAGTCTaGAAACTGGTTCCGGGACAGGTCAATGGCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QCRQGGQLLWEV*KLVPGQVNGPE Trigger: CTCAGGGCCATTGACCTGTCCCGGAACCAGTTTCAAGACTTCCCAGAGCAGCTGACCACCTTGCCTGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 72 bp | GCCCGCGTATCCTCTGGAGACATGAGCATATCAAACTaGATGAGCGGTGGGGCAATCACACGCACGTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: ARVSSGDMSISN*MSGGAITRTSA Trigger: CGCCGACGTGCGTGTGATTGCCCCACCGCTCATCAAGTTTGATATGCTCATGTCTCCAGAGGATACGCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CCA 72 bp | CTCTGGAGACATGAGCATATCAAACTTGATGAGCGGTaGGGCAATCACACGCACGTCGGCGCTCAGGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LWRHEHIKLDER*GNHTHVGAQGV Trigger: AACCCCCTGAGCGCCGACGTGCGTGTGATTGCCCCACCGCTCATCAAGTTTGATATGCTCATGTCTCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 90 bp | GCCAGCTTCTCCACCGGAACATCCACTATCTCATTCTCCTCCAGGTaGATAGTCTCCAGTGCAGGCAAGGTGGTCAGCTGCTCTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASFSTGTSTISFSSR*IVSSAGKVVSCSGK Trigger: CTTCCCAGAGCAGCTGACCACCTTGCCTGCACTGGAGACTATCAACCTGGAGGAGAATGAGATAGTGGATGTTCCGGTGGAGAAGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CCA 72 bp | GATAGTCTCCAGTGCAGGCAAGGTGGTCAGCTGCTCTaGGAAGTCTTGAAACTGGTTCCGGGACAGGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: DSLQCRQGGQLL*EVLKLVPGQVN Trigger: ATTGACCTGTCCCGGAACCAGTTTCAAGACTTCCCAGAGCAGCTGACCACCTTGCCTGCACTGGAGACTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CAA 72 bp | TCCACCGGAACATCCACTATCTCATTCTCCTCCAGGTaGATAGTCTCCAGTGCAGGCAAGGTGGTCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: STGTSTISFSSR*IVSSAGKVVSC Trigger: GCAGCTGACCACCTTGCCTGCACTGGAGACTATCAACCTGGAGGAGAATGAGATAGTGGATGTTCCGGTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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| CDS CCA 72 bp | GATCAGAGACGTTCCTCAGGACCTTGTAGATGCAGATaGGGAAAGAAACAAGCTTGCAGTCGGCCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DQRRSSGPCRCR*GKKQACSRPGP Trigger: TGGACCTGGCCGACTGCAAGCTTGTTTCTTTCCCCATCTGCATCTACAAGGTCCTGAGGAACGTCTCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049242.9 |
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