Pregenerated sensors for LRRC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032495Ensembl transcript IDs: ENSMUST00000035076.9, ENSMUST00000196598.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGTGGTGTCCACACTCTCCCCAGCACCTACAGGAGTGAACCCTaGAGGCATTCCTCCGCTCTTTGTTCTGAGGACCACCAGGTGACC | + |
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Preference number: 1 (lower is better) Translates to: QCGVHTLPSTYRSEP*RHSSALCSEDHQVT Trigger: GGTCACCTGGTGGTCCTCAGAACAAAGAGCGGAGGAATGCCTTCAGGGTTCACTCCTGTAGGTGCTGGGGAGAGTGTGGACACCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 90 bp | GGACCTTCGGAAGAACAGGCTCTCTTAACCACTGAGCCAGCCCCCTaGAACATTTTCAAGGTGGTAAATTCTCCATTTCACCCACAACCC | + |
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Preference number: 1 (lower is better) Translates to: GPSEEQALLTTEPAP*NIFKVVNSPFHPQP Trigger: GGGTTGTGGGTGAAATGGAGAATTTACCACCTTGAAAATGTTTCAGGGGGCTGGCTCAGTGGTTAAGAGAGCCTGTTCTTCCGAAGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR GCA 90 bp | AGATCCATCAGGTCCAGATTCCCAGAACAGTCCAGTCTCTCTAGATaGTCACAGTCTCCTAGCTCCGGGGGAATACTCTTCAAATGGTTA | + |
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Preference number: 1 (lower is better) Translates to: RSIRSRFPEQSSLSR*SQSPSSGGILFKWL Trigger: TAACCATTTGAAGAGTATTCCCCCGGAGCTAGGAGACTGTGAGCATCTAGAGAGACTGGACTGTTCTGGGAATCTGGACCTGATGGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196598.2 |
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| 3UTR CCA 90 bp | GCATCAGATTTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAACAGGCTCTCTTAACC | + |
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Preference number: 1 (lower is better) Translates to: ASDFVTDGCEPPCGC*DLNSGPSEEQALLT Trigger: GGTTAAGAGAGCCTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAAATCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 90 bp | GGATTTGAACTCTGGACCTTCGGAAGAACAGGCTCTCTTAACCACTaGGCCAGCCCCCTGAAACATTTTCAAGGTGGTAAATTCTCCATT | + |
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Preference number: 1 (lower is better) Translates to: GFELWTFGRTGSLNH*ASPLKHFQGGKFSI Trigger: AATGGAGAATTTACCACCTTGAAAATGTTTCAGGGGGCTGGCTCAGTGGTTAAGAGAGCCTGTTCTTCCGAAGGTCCAGAGTTCAAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 90 bp | CTTTCTTTCCACCCTCGAGACCCAAGTTATACCATCAGGCTCTCCTaGGAGTCAAAGTACAACTTAAAATGTACTTGCCAAAATAAATTT | + |
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Preference number: 1 (lower is better) Translates to: LSFHPRDPSYTIRLS*ESKYNLKCTCQNKF Trigger: AAATTTATTTTGGCAAGTACATTTTAAGTTGTACTTTGACTCTCAGGAGAGCCTGATGGTATAACTTGGGTCTCGAGGGTGGAAAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR TCA 90 bp | TGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCCGAGTACTGAGCCAGCCCCCTaGAACATTTTCAAGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: CRPGWPRTQKSARLCLPSTEPAP*NIFKVV Trigger: TACCACCTTGAAAATGTTTCAGGGGGCTGGCTCAGT...ACTCGGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAACCTGGTCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR GCA 90 bp | TTAACCACTGAGCCATCTCCCAGCCTTAGTAACCCTTTTGTTTTAGGTTGTGTTCATCCCGGAGGCTCCTaGCAGCCCACAGCTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: LTTEPSPSLSNPFVLGCVHPGGS*QPTAAL Trigger: GAGTGCAGCTGTGGGCTGGCAGGAGCCTCCGGGATG...AACACAACCTAAAACAAAAGGGTTACTAAGGCTGGGAGATGGCTCAGTGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCGAAAGGAGACCACTCATACACAAACCAGCAATACATGTGTATCTCCCTCTACAGGAGTGAACCCTaGAGGCATTCCTCCGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PPKGDHSYTNQQYMCISLYRSEP*RHSSAL Trigger: AAGAGCGGAGGAATGCCTTCAGGGTTCACTCCTGTA...GAGGGAGATACACATGTATTGCTGGTTTGTGTATGAGTGGTCTCCTTTCGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR CAA 90 bp | GATTTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAACAGGCTCTCTTAACCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: DFVTDGCEPPCGCWD*NSGPSEEQALLTTE Trigger: CTCAGTGGTTAAGAGAGCCTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR CCA 90 bp | ACCATTCAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCACACTGTCTCTGGGATTTGAACTCTaGACCTTCGGAAGAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: TIQDRTSRVFGSSQLTLSLGFEL*TFGRTG Trigger: GCCTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAG...AGACAGTGTGAGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTGAATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCGAAAGGAGACCACTCATACACAAACCAGCAATACATGTGTATCTCCCTCACCATCAGGCTCTCCTaGGAGTCAAAGTACAACTTA | + |
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Preference number: 2 (lower is better) Translates to: PPKGDHSYTNQQYMCISLTIRLS*ESKYNL Trigger: TAAGTTGTACTTTGACTCTCAGGAGAGCCTGATGGT...GAGGGAGATACACATGTATTGCTGGTTTGTGTATGAGTGGTCTCCTTTCGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTTTAACCACTGAGCCATCTCCCAGCCTTAGTAACCCTTTTGTTTTAGGTTTTACCAATGCAAATTaGCATCCCGGAGGCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TALTTEPSPSLSNPFVLGFTNAN*HPGGSC Trigger: GCAGGAGCCTCCGGGATGTCAATTTGCATTGGTAAA...ACCTAAAACAAAAGGGTTACTAAGGCTGGGAGATGGCTCAGTGGTTAAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCGAAAGGAGACCACTCATACACAAACCAGCAATACATGTGTATCTCCCTCAACAAGCAGAGTATTTaGATCTTCCCAGCTCACACT | + |
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Preference number: 2 (lower is better) Translates to: PPKGDHSYTNQQYMCISLNKQSI*IFPAHT Trigger: AGTGTGAGCTGGGAAGATCCAAATACTCTGCTTGTT...GAGGGAGATACACATGTATTGCTGGTTTGTGTATGAGTGGTCTCCTTTCGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR CCA 90 bp | TTAACCACTGAGCCATCTCCCAGCCTTAGTAACCCTTTTGTTTTAGGTTGTGTTGTAGTTTTTGAGATTTaGCAGACATCACGTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: LTTEPSPSLSNPFVLGCVVVFEI*QTSRTP Trigger: TGGAGTACGTGATGTCTGCCAAATCTCAAAAACTAC...AACACAACCTAAAACAAAAGGGTTACTAAGGCTGGGAGATGGCTCAGTGGTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR GCA 72 bp | CCAGGTTGGCCTCGAACTCAGAAATCCGCCCGCCTCTaGCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTQKSARL*LPSAGIKGVRH Trigger: GTGGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR GCA 72 bp | AAATTGACATCCCGGAGGCTCCTGCCAGCCCACAGCTaGACTCCAGTAGGCAGAACCCTCCTGTCACTCCCA | + |
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Preference number: 3 (lower is better) Translates to: KLTSRRLLPAHS*TPVGRTLLSLP Trigger: TGGGAGTGACAGGAGGGTTCTGCCTACTGGAGTGCAGCTGTGGGCTGGCAGGAGCCTCCGGGATGTCAATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 72 bp | GTCCACACTCTCCCCAGCACCTACAGGAGTGAACCCTaGAGGCATTCCTCCGCTCTTTGTTCTGAGGACCAC | + |
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Preference number: 3 (lower is better) Translates to: VHTLPSTYRSEP*RHSSALCSEDH Trigger: GTGGTCCTCAGAACAAAGAGCGGAGGAATGCCTTCAGGGTTCACTCCTGTAGGTGCTGGGGAGAGTGTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 72 bp | CCAGTTTGCACTGGGTACCCAGACTGGAATGGCAGGTaGGCCACCTGGTTCTTAGATTTGGATAGCAACAGC | + |
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Preference number: 3 (lower is better) Translates to: PVCTGYPDWNGR*ATWFLDLDSNS Trigger: GCTGTTGCTATCCAAATCTAAGAACCAGGTGGCTCACCTGCCATTCCAGTCTGGGTACCCAGTGCAAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR GCA 72 bp | AGGTCCAGATTCCCAGAACAGTCCAGTCTCTCTAGATaGTCACAGTCTCCTAGCTCCGGGGGAATACTCTTC | + |
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Preference number: 3 (lower is better) Translates to: RSRFPEQSSLSR*SQSPSSGGILF Trigger: GAAGAGTATTCCCCCGGAGCTAGGAGACTGTGAGCATCTAGAGAGACTGGACTGTTCTGGGAATCTGGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196598.2 |
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| 3UTR TCA 72 bp | CTATATCTTGTGGCAGGTCACTCAGATTGTTGCTGCTaGTATCCAGCCACTGCAGACGACACATCCGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LYLVAGHSDCCC*YPATADDTSAG Trigger: TCCTGCGGATGTGTCGTCTGCAGTGGCTGGATATCAGCAGCAACAATCTGAGTGACCTGCCACAAGATATAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196598.2 |
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| 3UTR TCA 72 bp | CTCTGGACCTTCGGAAGAACAGGCTCTCTTAACCACTaGGCCAGCCCCCTGAAACATTTTCAAGGTGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: LWTFGRTGSLNH*ASPLKHFQGGK Trigger: TTTACCACCTTGAAAATGTTTCAGGGGGCTGGCTCAGTGGTTAAGAGAGCCTGTTCTTCCGAAGGTCCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR CCA 72 bp | TTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: FVTDGCEPPCGC*DLNSGPSEEQA Trigger: AGCCTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR GCA 72 bp | GATTTTGTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: DFVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR CAA 90 bp | GTAGTTGTCTTCAGACACTCCAGAAGAGGGCATCAGATTTTGTTACGGATGGTTGGGGCAGTAAGATTTTaGTCATCTTCTGGTGAACCG | + |
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Preference number: 3 (lower is better) Translates to: VVVFRHSRRGHQILLRMVGAVRF*SSSGEP Trigger: CGGTTCACCAGAAGATGACAAAAATCTTACTGCCCC...AACCATCCGTAACAAAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR-3UTR CAA 90 bp | CCTCCGAAAGGAGACCACTCATACACAAACCAGCAATACATGTGTATCTCCCTCTATGGAAGTAGGAAGTaGTTTAGACTCAAGGAGCGT | + |
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Preference number: 3 (lower is better) Translates to: PPKGDHSYTNQQYMCISLYGSRK*FRLKER Trigger: ACGCTCCTTGAGTCTAAACAACTTCCTACTTCCATA...GAGGGAGATACACATGTATTGCTGGTTTGTGTATGAGTGGTCTCCTTTCGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 72 bp | GAAGAACAGGCTCTCTTAACCACTGAGCCAGCCCCCTaGAACATTTTCAAGGTGGTAAATTCTCCATTTCAC | + |
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Preference number: 3 (lower is better) Translates to: EEQALLTTEPAP*NIFKVVNSPFH Trigger: GTGAAATGGAGAATTTACCACCTTGAAAATGTTTCAGGGGGCTGGCTCAGTGGTTAAGAGAGCCTGTTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 72 bp | CACCCTCGAGACCCAAGTTATACCATCAGGCTCTCCTaGGAGTCAAAGTACAACTTAAAATGTACTTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: HPRDPSYTIRLS*ESKYNLKCTCQ Trigger: TTGGCAAGTACATTTTAAGTTGTACTTTGACTCTCAGGAGAGCCTGATGGTATAACTTGGGTCTCGAGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 72 bp | GAGTTTGACTCCTACTCTAGCATCTTCCCACTTTATTaGCCGAGGCTCTATCTCCTATTCAAGACAACAGCT | + |
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Preference number: 3 (lower is better) Translates to: EFDSYSSIFPLY*PRLYLLFKTTA Trigger: AGCTGTTGTCTTGAATAGGAGATAGAGCCTCGGTCAATAAAGTGGGAAGATGCTAGAGTAGGAGTCAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR TCA 72 bp | GTAAATTCTCCATTTCACCCACAACCCTCTAGCCCTTaGTTCCTGAACATAATGCATCCAATTTCAAAACTT | + |
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Preference number: 3 (lower is better) Translates to: VNSPFHPQPSSP*FLNIMHPISKL Trigger: AAGTTTTGAAATTGGATGCATTATGTTCAGGAATCAAGGGCTAGAGGGTTGTGGGTGAAATGGAGAATTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR GCA 90 bp | TGTCACTCCCATATGGAAGCCGCAGTGTGGTGTCCACACTCTCCCCAGCACCTATTTCCAGGAGCCTTGTaGTGGTGTCCACAAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: CHSHMEAAVWCPHSPQHLFPGAL*WCPQSH Trigger: ATGGCTTTGTGGACACCAGCACAAGGCTCCTGGAAA...TAGGTGCTGGGGAGAGTGTGGACACCACACTGCGGCTTCCATATGGGAGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | GAACAGTCCAGTCTCTCTAGATGCTCACAGTCTCCTAGCTCCGGGGGAATACTCCTCGCGCACTCTGCCTaGAAACAGAGTTCCTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: EQSSLSRCSQSPSSGGILLAHSA*KQSSSL Trigger: TAGAGAGGAACTCTGTTTCCAGGCAGAGTGCGCGAG...GAGTATTCCCCCGGAGCTAGGAGACTGTGAGCATCTAGAGAGACTGGACTGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196598.2 |
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| CDS-3UTR GCA 90 bp | ACAGCTTTAACCACTGAGCCATCTCCCAGCCTTAGTAACCCTTTTGTTTTAGGTGCACGCCCTTCCTCCTaGACTCGGCCACAAAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TALTTEPSPSLSNPFVLGARPSS*TRPQSP Trigger: GGGACTTTGTGGCCGAGTGCAGGAGGAAGGGCGTGC...ACCTAAAACAAAAGGGTTACTAAGGCTGGGAGATGGCTCAGTGGTTAAAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR TCA 90 bp | TGTCACTCCCATATGGAAGCCGCAGTGTGGTGTCCACACTCTCCCCAGCACCTATTTCCCATAAGGCTCTaGCAACAGAGATGTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: CHSHMEAAVWCPHSPQHLFPIRL*QQRCQT Trigger: TGTTTGACATCTCTGTTGTCAGAGCCTTATGGGAAA...TAGGTGCTGGGGAGAGTGTGGACACCACACTGCGGCTTCCATATGGGAGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR TCA 90 bp | TTAACCACTGAGCCATCTCCCAGCCTTAGTAACCCTTTTGTTTTAGGTTGTGTTGGGACCTCCACCAGGTaGTCCCCACTGACAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: LTTEPSPSLSNPFVLGCVGTSTR*SPLTTS Trigger: GCTGGTTGTCAGTGGGGATCACCTGGTGGAGGTCCC...AACACAACCTAAAACAAAAGGGTTACTAAGGCTGGGAGATGGCTCAGTGGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | TCCAGTCTCTCTAGATGCTCACAGTCTCCTAGCTCCGGGGGAATACTCTTCAAACCAGGAGCCTTGTGCTaGTGTCCACAAAGCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: SSLSRCSQSPSSGGILFKPGALC*CPQSHS Trigger: AGAATGGCTTTGTGGACACCAGCACAAGGCTCCTGG...TTTGAAGAGTATTCCCCCGGAGCTAGGAGACTGTGAGCATCTAGAGAGACTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196598.2 |
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| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAACAGGCTCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQALL Trigger: TAAGAGAGCCTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | CCTCCGAAAGGAGACCACTCATACACAAACCAGCAATACATGTGTATCTCCCTCCCAGGAGCCTTGTGCTaGTGTCCACAAAGCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: PPKGDHSYTNQQYMCISLPGALC*CPQSHS Trigger: AGAATGGCTTTGTGGACACCAGCACAAGGCTCCTGG...GAGGGAGATACACATGTATTGCTGGTTTGTGTATGAGTGGTCTCCTTTCGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | CCTCCGAAAGGAGACCACTCATACACAAACCAGCAATACATGTGTATCTCCCTCCTCGCGCACTCTGCCTaGAAACAGAGTTCCTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: PPKGDHSYTNQQYMCISLLAHSA*KQSSSL Trigger: TAGAGAGGAACTCTGTTTCCAGGCAGAGTGCGCGAG...GAGGGAGATACACATGTATTGCTGGTTTGTGTATGAGTGGTCTCCTTTCGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR GCA 90 bp | CGCCCGGATGAAACAGTTTTAAGTGTGAGGAAGAAAGATGTTTCGTCCTTTCGCCCACAAAGCCATTCTTaGAGTACTCAGCCTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RPDETVLSVRKKDVSSFRPQSHS*STQPGA Trigger: TGCCCCAGGCTGAGTACTGCAAGAATGGCTTTGTGG...GCGAAAGGACGAAACATCTTTCTTCCTCACACTTAAAACTGTTTCATCCGGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| 3UTR CAA 72 bp | GTTGTCTTCAGACACTCCAGAAGAGGGCATCAGATTTaGTTACGGATGGTTGTGAGCCACCATGTGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: VVFRHSRRGHQI*LRMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCCGTAACAAAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR GCA 90 bp | ACCATTCAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCACACTGTCTTCCAGTCTCTCTAGATaGTCACAGTCTCCTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TIQDRTSRVFGSSQLTLSSSLSR*SQSPSS Trigger: GGAGCTAGGAGACTGTGAGCATCTAGAGAGACTGGA...AGACAGTGTGAGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTGAATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR GCA 90 bp | GTAGTTGTCTTCAGACACTCCAGAAGAGGGCATCAGATTTTGTTACGGATGGTTAATTCCTTATCAAAATaGTGGCGGTCCCGCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: VVVFRHSRRGHQILLRMVNSLSK*WRSRSL Trigger: GAGCGAGCGGGACCGCCAGCATTTTGATAAGGAATT...AACCATCCGTAACAAAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | CAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCACACTGTCTGAGTGTGCGACCAATTTCAGCTaGAAGACACGTGATTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: QDRTSRVFGSSQLTLSECATNFS*KTRDLV Trigger: AACCAAATCACGTGTCTTCCAGCTGAAATTGGTCGC...ACACTCAGACAGTGTGAGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR TCA 90 bp | ACAGCTTTAACCACTGAGCCATCTCCCAGCCTTAGTAACCCTTTTGTTTTAGGTGAATGTACCATTCTTTaGGGTGTGTCTGCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TALTTEPSPSLSNPFVLGECTIL*GVSAPS Trigger: TGAAGGAGCAGACACACCTCAAAGAATGGTACATTC...ACCTAAAACAAAAGGGTTACTAAGGCTGGGAGATGGCTCAGTGGTTAAAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR GCA 90 bp | GTAGTTGTCTTCAGACACTCCAGAAGAGGGCATCAGATTTTGTTACGGATGGTTTTCTGCCATGCTTTGTaGTTCTTGACACGAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VVVFRHSRRGHQILLRMVFCHAL*FLTRVS Trigger: GGAAACTCGTGTCAAGAAGCACAAAGCATGGCAGAA...AACCATCCGTAACAAAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR GCA 90 bp | AACGCTGGAGAACTTGTTCGCAGAGATATCCACAAATGTAACTTGCTTCAAATTCCACAAAGCCATTCTTaGAGTACTCAGCCTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NAGELVRRDIHKCNLLQIPQSHS*STQPGA Trigger: TGCCCCAGGCTGAGTACTGCAAGAATGGCTTTGTGG...AATTTGAAGCAAGTTACATTTGTGGATATCTCTGCGAACAAGTTCTCCAGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196598.2 |
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| CDS-3UTR CCA 90 bp | ACCATTCAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCACACTGTCTCCTGTCTATATCTTGTaGCAGGTCACTCAGATTGTT | + |
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Preference number: 4 (lower is better) Translates to: TIQDRTSRVFGSSQLTLSPVYIL*QVTQIV Trigger: AACAATCTGAGTGACCTGCCACAAGATATAGACAGG...AGACAGTGTGAGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTGAATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | CAGGTGACCATTCAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCACACTTTGGTCGTATAACTaGGAACAGCTTCTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QVTIQDRTSRVFGSSQLTLWSYN*EQLLFL Trigger: AAGAAAGAGAAGCTGTTCCCAGTTATACGACCAAAG...TGTGAGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTGAATGGTCACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | GTAGTTGTCTTCAGACACTCCAGAAGAGGGCATCAGATTTTGTTACGGATGGTTATCCGGTCTTATCAATaGGATTGTCCACAAGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: VVVFRHSRRGHQILLRMVIRSYQ*DCPQGL Trigger: TAAGCCTTGTGGACAATCCCATTGATAAGACCGGAT...AACCATCCGTAACAAAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR TCA 90 bp | ACCATTCAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCACACTGTCTAAGCTGAAGACTAAATaGCACTTTGGTCGTATAACT | + |
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Preference number: 4 (lower is better) Translates to: TIQDRTSRVFGSSQLTLSKLKTK*HFGRIT Trigger: AGTTATACGACCAAAGTGTCATTTAGTCTTCAGCTT...AGACAGTGTGAGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTGAATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | GTAGTTGTCTTCAGACACTCCAGAAGAGGGCATCAGATTTTGTTACGGATGGTTAAGTTCAAACACAAATaGACTCCTCCGTTTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VVVFRHSRRGHQILLRMVKFKHK*TPPFVS Trigger: AGAGACAAACGGAGGAGTCCATTTGTGTTTGAACTT...AACCATCCGTAACAAAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CCA 90 bp | CAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCACACTGTCTGAGTGTAATCCAAAATTTTCATaGCTTGAAACAGCTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: QDRTSRVFGSSQLTLSECNPKFS*LETARC Trigger: ACATCGAGCTGTTTCAAGCCATGAAAATTTTGGATT...ACACTCAGACAGTGTGAGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS TCA 90 bp | AAAGGCGTGGAGGCATCGCAGAGGGCGGTCGGGACCTCCACCAGGTaGTCCCCACTGACAACCAGCAAGGTGAGCTTTTTGAGGTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: KGVEASQRAVGTSTR*SPLTTSKVSFLRLS Trigger: GCTCAACCTCAAAAAGCTCACCTTGCTGGTTGTCAGTGGGGATCACCTGGTGGAGGTCCCGACCGCCCTCTGCGATGCCTCCACGCCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CAA 90 bp | ATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAACAGGCTCTCTTAACTCTTTTCCAGGAGCCTaGTGCTGGTGTCCACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: MWLLGFELWTFGRTGSLNSFPGA*CWCPQS Trigger: GCTTTGTGGACACCAGCACAAGGCTCCTGGAAAAGA...GTTAAGAGAGCCTGTTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CAA 90 bp | CAGGTGACCATTCAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCACAGGCAGGTCACTCAGATaGTTGCTGCTGATATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: QVTIQDRTSRVFGSSQLTGRSLR*LLLISS Trigger: GCTGGATATCAGCAGCAACAATCTGAGTGACCTGCC...TGTGAGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTGAATGGTCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CAA 90 bp | TGTCACTCCCATATGGAAGCCGCAGTGTGGTGTCCACACTCTCCCCAGCACCTAGTCTTATCAATGGGATaGTCCACAAGGCTTACAAAT | + |
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Preference number: 5 (lower is better) Translates to: CHSHMEAAVWCPHSPQHLVLSMG*STRLTN Trigger: ATTTGTAAGCCTTGTGGACAATCCCATTGATAAGAC...TAGGTGCTGGGGAGAGTGTGGACACCACACTGCGGCTTCCATATGGGAGTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS TCA 90 bp | AAATGCTGGCGGTCCCGCTCGCTCTCTACTGTGTCTTCAGTGTCTTaGCATCCGGTCTTATCAATGGGATTGTCCACAAGGCTTACAAAT | + |
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Preference number: 5 (lower is better) Translates to: KCWRSRSLSTVSSVS*HPVLSMGLSTRLTN Trigger: ATTTGTAAGCCTTGTGGACAATCCCATTGATAAGACCGGATGTCAAGACACTGAAGACACAGTAGAGAGCGAGCGGGACCGCCAGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CAA 90 bp | CCACCAGGTGACCATTCAGGACAGAACAAGCAGAGTATTTGGATCTTCCCAGCTCATGCTTTGTGCTTCTaGACACGAGTTTCCCATAAG | + |
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Preference number: 5 (lower is better) Translates to: PPGDHSGQNKQSIWIFPAHALCF*TRVSHK Trigger: CTTATGGGAAACTCGTGTCAAGAAGCACAAAGCATG...AGCTGGGAAGATCCAAATACTCTGCTTGTTCTGTCCTGAATGGTCACCTGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS TCA 90 bp | CTGAAAGTTCAAACACAAATGGACTCCTCCGTTTGTCTCTGTCCTTaGCTCGCGCACTCTGCCTGGAAACAGAGTTCCTCTCTATCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LKVQTQMDSSVCLCP*LAHSAWKQSSSLSF Trigger: AAAAGATAGAGAGGAACTCTGTTTCCAGGCAGAGTGCGCGAGTCAAGGACAGAGACAAACGGAGGAGTCCATTTGTGTTTGAACTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035076.9 ENSMUST00000196598.2 |
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| CDS-3UTR CAA 90 bp | CTCTGTAGTTGTCTTCAGACACTCCAGAAGAGGGCATCAGATTTTGTTACGGATAGGTCACTCAGATTGTaGCTGCTGATATCCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LCSCLQTLQKRASDFVTDRSLRL*LLISSH Trigger: GTGGCTGGATATCAGCAGCAACAATCTGAGTGACCT...ATCCGTAACAAAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAACTACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CAA 90 bp | TCAAATTACTTAATTCAAAGGGGAGATCCATCAGGTCCAGATTCCCAGAACAGTTCTTTTCCAGGAGCCTaGTGCTGGTGTCCACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SNYLIQRGDPSGPDSQNSSFPGA*CWCPQS Trigger: GCTTTGTGGACACCAGCACAAGGCTCCTGGAAAAGA...ACTGTTCTGGGAATCTGGACCTGATGGATCTCCCCTTTGAATTAAGTAATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196598.2 |
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| CDS-3UTR CAA 90 bp | CTCTGTAGTTGTCTTCAGACACTCCAGAAGAGGGCATCAGATTTTGTTACGGATCAGCCTGTCTATATCTaGTGGCAGGTCACTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: LCSCLQTLQKRASDFVTDQPVYI*WQVTQI Trigger: AATCTGAGTGACCTGCCACAAGATATAGACAGGCTG...ATCCGTAACAAAATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAACTACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CAA 90 bp | ACAGCTTTAACCACTGAGCCATCTCCCAGCCTTAGTAACCCTTTTGTTTTAGGTTGTGTCTTCAGTGTCTaGACATCCGGTCTTATCAAT | + |
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Preference number: 5 (lower is better) Translates to: TALTTEPSPSLSNPFVLGCVFSV*TSGLIN Trigger: ATTGATAAGACCGGATGTCAAGACACTGAAGACACA...ACCTAAAACAAAAGGGTTACTAAGGCTGGGAGATGGCTCAGTGGTTAAAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS-3UTR CAA 90 bp | ACACAAACCAGCAATACATGTGTATCTCCCTCTTCTCTTCAGAACAGCCACTTCCAAAATTTTCATGGCTaGAAACAGCTCGATGTACGT | + |
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Preference number: 5 (lower is better) Translates to: TQTSNTCVSPSSLQNSHFQNFHG*KQLDVR Trigger: ACGTACATCGAGCTGTTTCAAGCCATGAAAATTTTG...GAAGTGGCTGTTCTGAAGAGAAGAGGGAGATACACATGTATTGCTGGTTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS TCA 72 bp | GAGGCATCGCAGAGGGCGGTCGGGACCTCCACCAGGTaGTCCCCACTGACAACCAGCAAGGTGAGCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: EASQRAVGTSTR*SPLTTSKVSFL Trigger: CAAAAAGCTCACCTTGCTGGTTGTCAGTGGGGATCACCTGGTGGAGGTCCCGACCGCCCTCTGCGATGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS TCA 72 bp | CGGTCCCGCTCGCTCTCTACTGTGTCTTCAGTGTCTTaGCATCCGGTCTTATCAATGGGATTGTCCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: RSRSLSTVSSVS*HPVLSMGLSTR Trigger: CCTTGTGGACAATCCCATTGATAAGACCGGATGTCAAGACACTGAAGACACAGTAGAGAGCGAGCGGGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS CAA 72 bp | GCGGTCCCGCTCGCTCTCTACTGTGTCTTCAGTGTCTaGACATCCGGTCTTATCAATGGGATTGTCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: AVPLALYCVFSV*TSGLINGIVHK Trigger: CTTGTGGACAATCCCATTGATAAGACCGGATGTCAAGACACTGAAGACACAGTAGAGAGCGAGCGGGACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS TCA 72 bp | CAAACACAAATGGACTCCTCCGTTTGTCTCTGTCCTTaGCTCGCGCACTCTGCCTGGAAACAGAGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QTQMDSSVCLCP*LAHSAWKQSSS Trigger: AGAGGAACTCTGTTTCCAGGCAGAGTGCGCGAGTCAAGGACAGAGACAAACGGAGGAGTCCATTTGTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035076.9 ENSMUST00000196598.2 |
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| CDS CAA 72 bp | TCAAACACAAATGGACTCCTCCGTTTGTCTCTGTCCTaGACTCGCGCACTCTGCCTGGAAACAGAGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SNTNGLLRLSLS*TRALCLETEFL Trigger: GAGGAACTCTGTTTCCAGGCAGAGTGCGCGAGTCAAGGACAGAGACAAACGGAGGAGTCCATTTGTGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035076.9 ENSMUST00000196598.2 |
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| CDS CAA 90 bp | AAAATGCTGGCGGTCCCGCTCGCTCTCTACTGTGTCTTCAGTGTCTaGACATCCGGTCTTATCAATGGGATTGTCCACAAGGCTTACAAA | + |
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Preference number: 6 (lower is better) Translates to: KMLAVPLALYCVFSV*TSGLINGIVHKAYK Trigger: TTTGTAAGCCTTGTGGACAATCCCATTGATAAGACCGGATGTCAAGACACTGAAGACACAGTAGAGAGCGAGCGGGACCGCCAGCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035076.9 |
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| CDS CAA 90 bp | CCTGAAAGTTCAAACACAAATGGACTCCTCCGTTTGTCTCTGTCCTaGACTCGCGCACTCTGCCTGGAAACAGAGTTCCTCTCTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: PESSNTNGLLRLSLS*TRALCLETEFLSIF Trigger: AAAGATAGAGAGGAACTCTGTTTCCAGGCAGAGTGCGCGAGTCAAGGACAGAGACAAACGGAGGAGTCCATTTGTGTTTGAACTTTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035076.9 ENSMUST00000196598.2 |
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| CDS GCA 72 bp | AAACAGAGTTCCTCTCTATCTTTTCCAGGAGCCTTGTaGTGGTGTCCACAAAGCCATTCTTGCAGTACTCAG | + |
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Preference number: 6 (lower is better) Translates to: KQSSSLSFPGAL*WCPQSHSCSTQ Trigger: CTGAGTACTGCAAGAATGGCTTTGTGGACACCAGCACAAGGCTCCTGGAAAAGATAGAGAGGAACTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035076.9 ENSMUST00000196598.2 |
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