Pregenerated sensors for LRRC18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041673Ensembl transcript IDs: ENSMUST00000038956.12, ENSMUST00000120588.8, ENSMUST00000120866.8, ENSMUST00000120951.2, ENSMUST00000123822.8
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCACCCATGCCTGTTTACATCTCTGTGATGTGTCTTTTGCCTTGTaGCCAGATTCATGTGAGTGCCACCGTAATCCTCATGTGCAATCC | + |
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Preference number: 1 (lower is better) Translates to: TTHACLHLCDVSFAL*PDSCECHRNPHVQS Trigger: GGATTGCACATGAGGATTACGGTGGCACTCACATGAATCTGGGCACAAGGCAAAAGACACATCACAGAGATGTAAACAGGCATGGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR GCA 90 bp | TCCTCATGTGCAATCCCTTCATTGTTTCAAAGGCAGCTCTTGTACTaGCACTTCATCACTATGAAGCTCACCGCTGAAAGGCCTGCCATT | + |
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Preference number: 1 (lower is better) Translates to: SSCAIPSLFQRQLLY*HFITMKLTAERPAI Trigger: AATGGCAGGCCTTTCAGCGGTGAGCTTCATAGTGATGAAGTGGCAGTACAAGAGCTGCCTTTGAAACAATGAAGGGATTGCACATGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR GCA 90 bp | TTGCCTTGTGCCCAGATTCATGTGAGTGCCACCGTAATCCTCATGTaGAATCCCTTCATTGTTTCAAAGGCAGCTCTTGTACTGCCACTT | + |
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Preference number: 1 (lower is better) Translates to: LPCAQIHVSATVILM*NPFIVSKAALVLPL Trigger: AAGTGGCAGTACAAGAGCTGCCTTTGAAACAATGAAGGGATTGCACATGAGGATTACGGTGGCACTCACATGAATCTGGGCACAAGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR CAA 90 bp | AGACCAGAACCACCCATGCCTGTTTACATCTCTGTGATGTGTCTTTaGCCTTGTGCCCAGATTCATGTGAGTGCCACCGTAATCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: RPEPPMPVYISVMCL*PCAQIHVSATVILM Trigger: CATGAGGATTACGGTGGCACTCACATGAATCTGGGCACAAGGCAAAAGACACATCACAGAGATGTAAACAGGCATGGGTGGTTCTGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTCTGTCTTCTAATTTaGGACTCTTCCTCTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: KAIQWLGQHRRACLPECSLCLLI*DSSSSE Trigger: CTCTGAAGAGGAAGAGTCCCAAATTAGAAGACAGAG...GGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| 3UTR CAA 90 bp | AGAACCACCCATGCCTGTTTACATCTCTGTGATGTGTCTTTTGCCTaGTGCCCAGATTCATGTGAGTGCCACCGTAATCCTCATGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: RTTHACLHLCDVSFA*CPDSCECHRNPHVQ Trigger: TTGCACATGAGGATTACGGTGGCACTCACATGAATCTGGGCACAAGGCAAAAGACACATCACAGAGATGTAAACAGGCATGGGTGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR CAA 90 bp | AGAAACAAGGTAAACAAAGTAAAAATCATAAAGCAATTCAGTGGCTaGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RNKVNKVKIIKQFSG*GSTGEPVFQNVPCA Trigger: GGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTTGTTTACCTTGTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGGTGGTGATATTGTATCATTTTGAGTGGCATGTAGAGAATGAAAGACTTAGCAATTCAGTGGCTTaGGCAGCACCGGAGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LLVVILYHFEWHVENERLSNSVA*AAPESL Trigger: CAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCT...AAGTCTTTCATTCTCTACATGCCACTCAAAATGATACAATATCACCACCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR-3UTR TCA 90 bp | GAATTACATATAGCTCAGGGCTTACTGGGTCTGCTAGAGTATCATGTTAACTATGTGGCATGTAGAGAATaGAAGACTTTTCAGTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: ELHIAQGLLGLLEYHVNYVACRE*KTFQSY Trigger: GTAAGACTGAAAAGTCTTTCATTCTCTACATGCCAC...ATAGTTAACATGATACTCTAGCAGACCCAGTAAGCCCTGAGCTATATGTAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR TCA 72 bp | TTCAAAGGCAGCTCTTGTACTGCCACTTCATCACTATaGAGCTCACCGCTGAAAGGCCTGCCATTCTTGACT | + |
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Preference number: 3 (lower is better) Translates to: FKGSSCTATSSL*SSPLKGLPFLT Trigger: AGTCAAGAATGGCAGGCCTTTCAGCGGTGAGCTTCATAGTGATGAAGTGGCAGTACAAGAGCTGCCTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR GCA 72 bp | GCCTGTTTACATCTCTGTGATGTGTCTTTTGCCTTGTaGCCAGATTCATGTGAGTGCCACCGTAATCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ACLHLCDVSFAL*PDSCECHRNPH Trigger: ATGAGGATTACGGTGGCACTCACATGAATCTGGGCACAAGGCAAAAGACACATCACAGAGATGTAAACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR-3UTR CAA 90 bp | AAAGTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCACTCTGTCTTCTAATTaGGGACTCTTCCTCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: KVKIIKQFSGLGSTGEPVTLSSN*GLFLFR Trigger: TCTGAAGAGGAAGAGTCCCAAATTAGAAGACAGAGT...GACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| 3UTR TCA 72 bp | CCGCTGAAAGGCCTGCCATTCTTGACTATTGACAACTaGCCTTCCCTGTCACCACTTGCATTTTATCATTTA | + |
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Preference number: 3 (lower is better) Translates to: PLKGLPFLTIDN*PSLSPLAFYHL Trigger: TAAATGATAAAATGCAAGTGGTGACAGGGAAGGTCAGTTGTCAATAGTCAAGAATGGCAGGCCTTTCAGCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR-3UTR CAA 90 bp | GAATTACATATAGCTCAGGGCTTACTGGGTCTGCTAGAGTATCATGTTAACTATCCCAGAATACCACCATaGAGATCTGTCCAAGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: ELHIAQGLLGLLEYHVNYPRIPP*RSVQVV Trigger: AACAACTTGGACAGATCTCAATGGTGGTATTCTGGG...ATAGTTAACATGATACTCTAGCAGACCCAGTAAGCCCTGAGCTATATGTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR GCA 72 bp | TCTATTAGAACCTGCAAGGATACAACCAACAATGAGTaGTTTCAAATGAGTCCAGTGAACAGAAGGTACAGT | + |
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Preference number: 3 (lower is better) Translates to: SIRTCKDTTNNE*FQMSPVNRRYS Trigger: ACTGTACCTTCTGTTCACTGGACTCATTTGAAAGCACTCATTGTTGGTTGTATCCTTGCAGGTTCTAATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| 3UTR CCA 72 bp | TTTCTTTTGCTACCTTTCTGTGTACAACTAAGGGAATaGTTAAAATTCCACTTCAATTTGTTCATAGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: FLLLPFCVQLRE*LKFHFNLFIVC Trigger: GCACACTATGAACAAATTGAAGTGGAATTTTAACCATTCCCTTAGTTGTACACAGAAAGGTAGCAAAAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| CDS-3UTR CCA 90 bp | CAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACGGGCCCCCAGTGTGGTaGGCACGCTGTCCAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QWLGQHRRACLPECSLCHGPPVW*ARCPGG Trigger: ACCACCTGGACAGCGTGCCCACCACACTGGGGGCCC...GTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACTCAGGGCCCCCAGTGTaGTGGGCACGCTGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QWLGQHRRACLPECSLCHSGPPV*WARCPG Trigger: ACCTGGACAGCGTGCCCACCACACTGGGGGCCCTGA...GTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | GCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGGGGCCCCCAGTGTGGTaGGCACGCTGTCCAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: AIQWLGQHRRACLPECSLGPPVW*ARCPGG Trigger: ACCACCTGGACAGCGTGCCCACCACACTGGGGGCCC...CAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | AAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTCCCGGGCCCCCAGTGTGGTaGGCACGCTGTCCAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: KSPLLWVQPTVSSSLLSPGPPVW*ARCPGG Trigger: ACCACCTGGACAGCGTGCCCACCACACTGGGGGCCC...GGGAGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR CCA 90 bp | AAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTCCCTCAGGGCCCCCAGTGTaGTGGGCACGCTGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KSPLLWVQPTVSSSLLSPSGPPV*WARCPG Trigger: ACCTGGACAGCGTGCCCACCACACTGGGGGCCCTGA...GGGAGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACCGGTGCGGATGTTCTTaGGTTGGTTCAGCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: QWLGQHRRACLPECSLCHRCGCS*VGSAPQ Trigger: CTGTGGAGCTGAACCAACTCAAGAACATCCGCACCG...GTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACCTTCCTGGGCATCCTTaGCTGTTGAGTTGGGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QWLGQHRRACLPECSLCHLPGHP*LLSWVK Trigger: TTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAG...GTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR TCA 90 bp | GTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACTCTGTTGTTGCTCACATTaGGGAAGAGCAAGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VAWAAPESLSSRMFPVPLCCCSH*GRARRS Trigger: TGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACA...GAGTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | GCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGAGCAAGGAGGTCATCTaGCCAATGGATTCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AIQWLGQHRRACLPECSLSKEVI*PMDSGS Trigger: GCTCCCTGAATCCATTGGCCAGATGACCTCCTTGCT...CAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR GCA 90 bp | CAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACCACTTTGGGTTCTCATaGAGACCATACCAAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: QWLGQHRRACLPECSLCHHFGFS*RPYQGC Trigger: ACATCCTTGGTATGGTCTGCATGAGAACCCAAAGTG...GTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | AAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTCCCAGCAAGGAGGTCATCTaGCCAATGGATTCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KSPLLWVQPTVSSSLLSPSKEVI*PMDSGS Trigger: GCTCCCTGAATCCATTGGCCAGATGACCTCCTTGCT...GGGAGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR TCA 90 bp | GCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGTTGTTGCTCACATTaGGGAAGAGCAAGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: AIQWLGQHRRACLPECSLCCCSH*GRARRS Trigger: TGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACA...CAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR TCA 90 bp | TATGGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTCGGTGCGGATGTTCTTaGGTTGGTTCAGCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: YGLGGKAPTVIQEPSPLGRCGCS*VGSAPQ Trigger: CTGTGGAGCTGAACCAACTCAAGAACATCCGCACCG...ACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR TCA 90 bp | GTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACTCGGTTTTCTAGCCTTTTaGTGGAGTCTACGAACATCT | + |
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Preference number: 4 (lower is better) Translates to: VAWAAPESLSSRMFPVPLGFLAF*WSLRTS Trigger: AGATGTTCGTAGACTCCATCAAAAGGCTAGAAAACC...GAGTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | CAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTCTTCCTGGGCATCCTTaGCTGTTGAGTTGGGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QFSGLGSTGEPVFQNVPCLPGHP*LLSWVK Trigger: TTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAG...ACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| 3UTR CAA 72 bp | GGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTaGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: GKAPTVIQEPSP*GTAYCLVFPPF Trigger: GAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR TCA 90 bp | CAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGGTTCCTCTTTATGTTaGGCTTCTTCAGCTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: QFSGLGSTGEPVFQNVPCGSSLC*ASSAWG Trigger: TCCCCAAGCTGAAGAAGCTCAACATAAAGAGGAACC...ACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR TCA 90 bp | AAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCAACAGCACTGGGCTCTaGGCCTCTTCTGTCTTAACA | + |
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Preference number: 4 (lower is better) Translates to: KAIQWLGQHRRACLPECSNSTGL*ASSVLT Trigger: TGTTAAGACAGAAGAGGCTCAGAGCCCAGTGCTGTT...GGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | AAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCGCAGGTTCTGGAACTTaGCGATGGAGTCGGGAATTT | + |
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Preference number: 4 (lower is better) Translates to: KAIQWLGQHRRACLPECSAGSGT*RWSREF Trigger: AAATTCCCGACTCCATCGCCAAGTTCCAGAACCTGC...GGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | GTTTTATGGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGCACGCTGTCCAGGTaGTTAAGGCCCAGATTCACG | + |
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Preference number: 4 (lower is better) Translates to: VLWLGWKGSHSNTRALSFGTLSR*LRPRFT Trigger: CGTGAATCTGGGCCTTAACCACCTGGACAGCGTGCC...AAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCCATAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR TCA 90 bp | TGGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACTGTTGTTGCTCACATTaGGGAAGAGCAAGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: WLGWKGSHSNTRALSFGYCCCSH*GRARRS Trigger: TGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACA...GTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTGGTTCCTCTTTATGTTaGGCTTCTTCAGCTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GSHSNTRALSFGYSLLSRGSSLC*ASSAWG Trigger: TCCCCAAGCTGAAGAAGCTCAACATAAAGAGGAACC...ACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTAGGTCATCTGGCCAATaGATTCAGGGAGCTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: GSHSNTRALSFGYSLLSRRSSGQ*IQGACQ Trigger: TTGACAAGCTCCCTGAATCCATTGGCCAGATGACCT...ACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCGGCACGCTGTCCAGGTaGTTAAGGCCCAGATTCACG | + |
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Preference number: 4 (lower is better) Translates to: KVKIIKQFSGLGSTGEPVGTLSR*LRPRFT Trigger: CGTGAATCTGGGCCTTAACCACCTGGACAGCGTGCC...GACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTGGCACGCTGTCCAGGTaGTTAAGGCCCAGATTCACG | + |
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Preference number: 4 (lower is better) Translates to: QSKNHKAIQWLGQHRRACGTLSR*LRPRFT Trigger: CGTGAATCTGGGCCTTAACCACCTGGACAGCGTGCC...ACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | AATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGTGGGTGAAACCAAATTaGAAAAGAGGGCCTTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: NSVAWAAPESLSSRMFPVWVKPN*KRGPFS Trigger: CGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCA...CACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CCA 90 bp | CCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCTTCCTGGGCATCCTTaGCTGTTGAGTTGGGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: PTVIQEPSPLGTAYCLVFLPGHP*LLSWVK Trigger: TTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAG...GAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR TCA 90 bp | AAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTCCCGGTTTTCTAGCCTTTTaGTGGAGTCTACGAACATCT | + |
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Preference number: 4 (lower is better) Translates to: KSPLLWVQPTVSSSLLSPGFLAF*WSLRTS Trigger: AGATGTTCGTAGACTCCATCAAAAGGCTAGAAAACC...GGGAGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR TCA 90 bp | AATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGGGTTTTCTAGCCTTTTaGTGGAGTCTACGAACATCT | + |
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Preference number: 4 (lower is better) Translates to: NSVAWAAPESLSSRMFPVGFLAF*WSLRTS Trigger: AGATGTTCGTAGACTCCATCAAAAGGCTAGAAAACC...CACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR GCA 90 bp | TACAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTGCCTGTTGGCATCTCTaGAGACAGGATGAACACATA | + |
|
Preference number: 4 (lower is better) Translates to: YKSPLLWVQPTVSSSLLSACWHL*RQDEHI Trigger: TATGTGTTCATCCTGTCTGCAGAGATGCCAACAGGC...AGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTGCAGGTTCTGGAACTTaGCGATGGAGTCGGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SHSNTRALSFGYSLLSRLAGSGT*RWSREF Trigger: AAATTCCCGACTCCATCGCCAAGTTCCAGAACCTGC...AAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCGATTCATCTGCATTTaGGAAGGGGTTCCTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSVAWAAPESLSSRMFPVRFICI*EGVPLY Trigger: ATAAAGAGGAACCCCTTCCCAAATGCAGATGAATCG...CACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CCA 90 bp | CCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCTATTCAACTTGTCCCTaGCCTGTTGGCATCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTVIQEPSPLGTAYCLVFYSTCP*PVGISA Trigger: TGCAGAGATGCCAACAGGCCAGGGACAAGTTGAATA...GAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTATGGGTGAAACCAAATTaGAAAAGAGGGCCTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GWKGSHSNTRALSFGYSLWVKPN*KRGPFS Trigger: CGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCA...TAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCTGGGTGAAACCAAATTaGAAAAGAGGGCCTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KAIQWLGQHRRACLPECSWVKPN*KRGPFS Trigger: CGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCA...GGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTATGGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTCACCTCCATTCTTCCTaGGCATCCTTGGCTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLWLGWKGSHSNTRALSFHLHSS*ASLAVE Trigger: CTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTG...AAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCCATAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| 3UTR CAA 72 bp | CCACCCATGCCTGTTTACATCTCTGTGATGTGTCTTTaGCCTTGTGCCCAGATTCATGTGAGTGCCACCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPMPVYISVMCL*PCAQIHVSATV Trigger: TACGGTGGCACTCACATGAATCTGGGCACAAGGCAAAAGACACATCACAGAGATGTAAACAGGCATGGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CCA 90 bp | GGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTACGATTCATCTGCATTTaGGAAGGGGTTCCTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GWKGSHSNTRALSFGYSLRFICI*EGVPLY Trigger: ATAAAGAGGAACCCCTTCCCAAATGCAGATGAATCG...TAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTCCAGAATGTTCCCTGTGCCACTCTGTCTTCTAATTTGGGACTCTTCCTCATGTCCAAACAGCACTaGGCTCTGAGCCTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFQNVPCATLSSNLGLFLMSKQH*ALSLFC Trigger: ACAGAAGAGGCTCAGAGCCCAGTGCTGTTTGGACAT...GAGGAAGAGTCCCAAATTAGAAGACAGAGTGGCACAGGGAACATTCTGGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
||
| CDS-3UTR GCA 90 bp | GTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCGCCTGTTGGCATCTCTaGAGACAGGATGAACACATA | + |
|
Preference number: 4 (lower is better) Translates to: VKIIKQFSGLGSTGEPVFACWHL*RQDEHI Trigger: TATGTGTTCATCCTGTCTGCAGAGATGCCAACAGGC...GAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTACCTTTCTGTGTACAACTAAGGGAATGGTTAAAATTCCACTTCAATTTGTCAGGGCCCCCAGTGTaGTGGGCACGCTGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPFCVQLREWLKFHFNLSGPPV*WARCPG Trigger: ACCTGGACAGCGTGCCCACCACACTGGGGGCCCTGA...CAAATTGAAGTGGAATTTTAACCATTCCCTTAGTTGTACACAGAAAGGTAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR GCA 90 bp | GTCTTCCAGAATGTTCCCTGTGCCACTCTGTCTTCTAATTTGGGACTCTTCCTCGTAACCGTGCAGTTCTaGAAGAATGAAGCAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VFQNVPCATLSSNLGLFLVTVQF*KNEATI Trigger: GATGGTTGCTTCATTCTTGCAGAACTGCACGGTTAC...GAGGAAGAGTCCCAAATTAGAAGACAGAGTGGCACAGGGAACATTCTGGAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCAGAATGTTCCCTGTGCCACTCTGTCTTCTAATTTGGGACTCTTCCTCTAGGTCATCTGGCCAATaGATTCAGGGAGCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSRMFPVPLCLLIWDSSSRSSGQ*IQGACQ Trigger: TTGACAAGCTCCCTGAATCCATTGGCCAGATGACCT...AGAGGAAGAGTCCCAAATTAGAAGACAGAGTGGCACAGGGAACATTCTGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAGGATACAACCAACAATGAGTGCTTTCAAATGAGTCCAGTGAACAGAAGGAGCAAGGAGGTCATCTaGCCAATGGATTCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKDTTNNECFQMSPVNRRSKEVI*PMDSGS Trigger: GCTCCCTGAATCCATTGGCCAGATGACCTCCTTGCT...CCTTCTGTTCACTGGACTCATTTGAAAGCACTCATTGTTGGTTGTATCCTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CCA 90 bp | AAAGTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTATTCAACTTGTCCCTaGCCTGTTGGCATCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVKIIKQFSGLGSTGEPVYSTCP*PVGISA Trigger: TGCAGAGATGCCAACAGGCCAGGGACAAGTTGAATA...GACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| 3UTR CAA 72 bp | CATGCCTGTTTACATCTCTGTGATGTGTCTTTTGCCTaGTGCCCAGATTCATGTGAGTGCCACCGTAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HACLHLCDVSFA*CPDSCECHRNP Trigger: AGGATTACGGTGGCACTCACATGAATCTGGGCACAAGGCAAAAGACACATCACAGAGATGTAAACAGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CCA 90 bp | GTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCGATTCATCTGCATTTaGGAAGGGGTTCCTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VKIIKQFSGLGSTGEPVFRFICI*EGVPLY Trigger: ATAAAGAGGAACCCCTTCCCAAATGCAGATGAATCG...GAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| 3UTR CAA 72 bp | GTAAACAAAGTAAAAATCATAAAGCAATTCAGTGGCTaGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNKVKIIKQFSG*GSTGEPVFQNV Trigger: AACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTTGTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| 3UTR CAA 72 bp | TTGGAGACTGGCCCTTTAAAGCCCAGAATACCACCATaGAGATCTGTCCAAGTTGTTGTAATTTCAAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LETGPLKPRIPP*RSVQVVVISNR Trigger: CCGATTTGAAATTACAACAACTTGGACAGATCTCAATGGTGGTATTCTGGGCTTTAAAGGGCCAGTCTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR GCA 90 bp | GAATTACATATAGCTCAGGGCTTACTGGGTCTGCTAGAGTATCATGTTAACTATGCCTGTTGGCATCTCTaGAGACAGGATGAACACATA | + |
|
Preference number: 4 (lower is better) Translates to: ELHIAQGLLGLLEYHVNYACWHL*RQDEHI Trigger: TATGTGTTCATCCTGTCTGCAGAGATGCCAACAGGC...ATAGTTAACATGATACTCTAGCAGACCCAGTAAGCCCTGAGCTATATGTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CCA 90 bp | ACTAGTACTTTCTATGTAAAATGTAACACCAGACTTTGTTCACCTACTTGTGGAGCAGGTTCTGGAACTTaGCGATGGAGTCGGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TSTFYVKCNTRLCSPTCGAGSGT*RWSREF Trigger: AAATTCCCGACTCCATCGCCAAGTTCCAGAACCTGC...TCCACAAGTAGGTGAACAAAGTCTGGTGTTACATTTTACATAGAAAGTACTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CCA 90 bp | TTGCTACCTTTCTGTGTACAACTAAGGGAATGGTTAAAATTCCACTTCAATTTGAACCTCCATTCTTCCTaGGCATCCTTGGCTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPFCVQLREWLKFHFNLNLHSS*ASLAVE Trigger: CTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTT...CAAATTGAAGTGGAATTTTAACCATTCCCTTAGTTGTACACAGAAAGGTAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR TCA 90 bp | TTACTGGTGGTGATATTGTATCATTTTGAGTGGCATGTAGAGAATGAAAGACTTGGTTCCTCTTTATGTTaGGCTTCTTCAGCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLVVILYHFEWHVENERLGSSLC*ASSAWG Trigger: TCCCCAAGCTGAAGAAGCTCAACATAAAGAGGAACC...AAGTCTTTCATTCTCTACATGCCACTCAAAATGATACAATATCACCACCAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACTTCAGCTTGGGGAGCTaGGCGATGCTGGCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QWLGQHRRACLPECSLCHFSLGS*AMLAGM Trigger: CATCCCCGCCAGCATCGCCAAGCTCCCCAAGCTGAA...GTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | CAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTTTCAGCTTGGGGAGCTaGGCGATGCTGGCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QFSGLGSTGEPVFQNVPCFSLGS*AMLAGM Trigger: CATCCCCGCCAGCATCGCCAAGCTCCCCAAGCTGAA...ACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACACGGTGCGGATGTTCTaGAGTTGGTTCAGCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QWLGQHRRACLPECSLCHTVRMF*SWFSST Trigger: TGTGGAGCTGAACCAACTCAAGAACATCCGCACCGT...GTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | AATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCTTGTCCCTGGCCTGTaGGCATCTCTGCAGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NSVAWAAPESLSSRMFPVLVPGL*ASLQTG Trigger: TCCTGTCTGCAGAGATGCCAACAGGCCAGGGACAAG...CACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | CAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTCTTGTCCCTGGCCTGTaGGCATCTCTGCAGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QFSGLGSTGEPVFQNVPCLVPGL*ASLQTG Trigger: TCCTGTCTGCAGAGATGCCAACAGGCCAGGGACAAG...ACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS CCA 90 bp | TCCAGGTGGTTAAGGCCCAGATTCACGGTGCGGATGTTCTTGAGTTaGTTCAGCTCCACAGGAAGCCCGTTGGTGGTCAGCCTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRWLRPRFTVRMFLS*FSSTGSPLVVSLLL Trigger: CAACAACAGGCTGACCACCAACGGGCTTCCTGTGGAGCTGAACCAACTCAAGAACATCCGCACCGTGAATCTGGGCCTTAACCACCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTTTATGGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTCAGCTTGGGGAGCTaGGCGATGCTGGCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VFYGLGGKAPTVIQEPSPFSLGS*AMLAGM Trigger: CATCCCCGCCAGCATCGCCAAGCTCCCCAAGCTGAA...AGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCCATAAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTTGTCCCTGGCCTGTaGGCATCTCTGCAGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGWKGSHSNTRALSFGYSLVPGL*ASLQTG Trigger: TCCTGTCTGCAGAGATGCCAACAGGCCAGGGACAAG...GCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACACGCAGGTTCTGGAACTaGGCGATGGAGTCGGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: GLGGKAPTVIQEPSPLGTRRFWN*AMESGI Trigger: AATTCCCGACTCCATCGCCAAGTTCCAGAACCTGCG...TGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTCCATGGTAGTCAGCAGATaGTCATGCAGCCCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QEPSPLGTAYCLVFPPFSMVVSR*SCSPTS Trigger: TGAGGTGGGGCTGCATGACAATCTGCTGACTACCAT...GGAGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTTGAGCTTCTTCAGCTaGGGGAGCTTGGCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGGKAPTVIQEPSPLGTALSFFS*GSLAML Trigger: CAGCATCGCCAAGCTCCCCAAGCTGAAGAAGCTCAA...GGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTCCCTCTTCCTGGGCATCCTaGGCTGTTGAGTTGGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KSPLLWVQPTVSSSLLSPSSWAS*AVELGE Trigger: TTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGA...GGGAGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACACGGTGCGGATGTTCTaGAGTTGGTTCAGCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: WLGWKGSHSNTRALSFGYTVRMF*SWFSST Trigger: TGTGGAGCTGAACCAACTCAAGAACATCCGCACCGT...GTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | CAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGGGCATCCTTGGCTGTaGAGTTGGGTGAAACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QFSGLGSTGEPVFQNVPCGHPWL*SWVKPN Trigger: ATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCC...ACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCTCTTCCTGGGCATCCTaGGCTGTTGAGTTGGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KAIQWLGQHRRACLPECSSSWAS*AVELGE Trigger: TTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGA...GGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS CCA 90 bp | GTGAGCGTAACCTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTTaGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTCGGTGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSVTSILPGHPWLLS*VKPNWKRGPFSVQR Trigger: CCTCTGCACCGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTTACGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CAA 90 bp | GTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTGCCACTCCCATCAAATGTGATTTaGATGCAGTTCTTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VAWAAPESLSSRMFPVPLPSNVI*MQFFAT Trigger: TGTGGCAAAGAACTGCATCAAAATCACATTTGATGG...GAGTGGCACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | TCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTAGCCGCAAGATACACTaGGGGAAGGTGGTGATACCC | + |
|
Preference number: 5 (lower is better) Translates to: SHSNTRALSFGYSLLSRLSRKIH*GKVVIP Trigger: GGGTATCACCACCTTCCCCAAGTGTATCTTGCGGCT...AAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTTGTTGCTCACATaGAGGAAGAGCAAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KAIQWLGQHRRACLPECSLLLLT*RKSKEV Trigger: GACCTCCTTGCTCTTCCTCAATGTGAGCAACAACAG...GGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | AAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGTTGAGCTTCTTCAGCTaGGGGAGCTTGGCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KIIKQFSGLGSTGEPVFQLSFFS*GSLAML Trigger: CAGCATCGCCAAGCTCCCCAAGCTGAAGAAGCTCAA...CTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | CAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCCTGTCCGATTCATCTGCATTaGGGAAGGGGTTCCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: QFSGLGSTGEPVFQNVPCPIHLH*GRGSSL Trigger: TAAAGAGGAACCCCTTCCCAAATGCAGATGAATCGG...ACAGGGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGCCCAGATTCATGTGAGTGCCACCGTAATCCTCATGTGCAATCCCTTCATAGCCGCAAGATACACTaGGGGAAGGTGGTGATACCC | + |
|
Preference number: 5 (lower is better) Translates to: LCPDSCECHRNPHVQSLHSRKIH*GKVVIP Trigger: GGGTATCACCACCTTCCCCAAGTGTATCTTGCGGCT...ATGAAGGGATTGCACATGAGGATTACGGTGGCACTCACATGAATCTGGGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CAA 90 bp | TACAAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTCTGTTGTTGCTCACATaGAGGAAGAGCAAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YKSPLLWVQPTVSSSLLSLLLLT*RKSKEV Trigger: GACCTCCTTGCTCTTCCTCAATGTGAGCAACAACAG...AGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCTTGAGCTTCTTCAGCTaGGGGAGCTTGGCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VKIIKQFSGLGSTGEPVFLSFFS*GSLAML Trigger: CAGCATCGCCAAGCTCCCCAAGCTGAAGAAGCTCAA...GAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGCCCTCTCCTTTGGGTACAGCCTACTGTCTCGTCTTCCCTCCTTTCTCCCTTGGGTGAAACCAAATaGGAAAAGAGGGCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSPLLWVQPTVSSSLLSPLGETK*EKRAFL Trigger: GAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAA...GGGAGAAAGGAGGGAAGACGAGACAGTAGGCTGTACCCAAAGGAGAGGGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS CCA 90 bp | GAGGGGGCCATGCTCTTGATTTTATTCAACTTGTCCCTGGCCTGTTaGCATCTCTGCAGACAGGATGAACACATATCCTTCTCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: EGAMLLILFNLSLAC*HLCRQDEHISFSST Trigger: GGTGGAAGAGAAGGATATGTGTTCATCCTGTCTGCAGAGATGCCAACAGGCCAGGGACAAGTTGAATAAAATCAAGAGCATGGCCCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
||
| CDS CCA 90 bp | GTCTTAACACACTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTTaGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTCGGTGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLTHSILPGHPWLLS*VKPNWKRGPFSVQR Trigger: CCTCTGCACCGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGTGTGTTAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
||
| CDS CCA 90 bp | CTTTGGGTTCTCATGCAGACCATACCAAGGATGTCCAAACAGCACTaGGCTCTGAGCCTCTTCTGTCTTAACACACTCCATTCTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWVLMQTIPRMSKQH*ALSLFCLNTLHSSW Trigger: CCAGGAAGAATGGAGTGTGTTAAGACAGAAGAGGCTCAGAGCCCAGTGCTGTTTGGACATCCTTGGTATGGTCTGCATGAGAACCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCGCAGGTTCTGGAACTaGGCGATGGAGTCGGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QSKNHKAIQWLGQHRRACRRFWN*AMESGI Trigger: AATTCCCGACTCCATCGCCAAGTTCCAGAACCTGCG...ACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCAGAATGTTCCTTGGGTGAAACCAAATaGGAAAAGAGGGCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KAIQWLGQHRRACLPECSLGETK*EKRAFL Trigger: GAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAA...GGAACATTCTGGAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS CCA 90 bp | GAAGCAACCATCCATACTTCTCCAGGGAGTTCAGAAGTGACACTTTaGGTTCTCATGCAGACCATACCAAGGATGTCCAAACAGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EATIHTSPGSSEVTL*VLMQTIPRMSKQHW Trigger: CCAGTGCTGTTTGGACATCCTTGGTATGGTCTGCATGAGAACCCAAAGTGTCACTTCTGAACTCCCTGGAGAAGTATGGATGGTTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCACGGTGCGGATGTTCTaGAGTTGGTTCAGCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KVKIIKQFSGLGSTGEPVTVRMF*SWFSST Trigger: TGTGGAGCTGAACCAACTCAAGAACATCCGCACCGT...GACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTATGGTAGTCAGCAGATaGTCATGCAGCCCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSKNHKAIQWLGQHRRACMVVSR*SCSPTS Trigger: TGAGGTGGGGCTGCATGACAATCTGCTGACTACCAT...ACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTTTATGGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTCCGATTCATCTGCATTaGGGAAGGGGTTCCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VFYGLGGKAPTVIQEPSPPIHLH*GRGSSL Trigger: TAAAGAGGAACCCCTTCCCAAATGCAGATGAATCGG...AGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCCATAAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATGGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGGCATCCTTGGCTGTaGAGTTGGGTGAAACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FYGLGGKAPTVIQEPSPLGHPWL*SWVKPN Trigger: ATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCC...CAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCCATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS-3UTR CAA 90 bp | GGCTTGGGTGGAAAGGCTCCCACAGTAATACAAGAGCCCTCTCCTTTGGGTACACCATCAAATGTGATTTaGATGCAGTTCTTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GLGGKAPTVIQEPSPLGTPSNVI*MQFFAT Trigger: TGTGGCAAAGAACTGCATCAAAATCACATTTGATGG...TGTACCCAAAGGAGAGGGCTCTTGTATTACTGTGGGAGCCTTTCCACCCAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCTTCCCGATTCATCTGCATTaGGGAAGGGGTTCCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VKIIKQFSGLGSTGEPVFPIHLH*GRGSSL Trigger: TAAAGAGGAACCCCTTCCCAAATGCAGATGAATCGG...GAAGACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CAA 90 bp | TCTTCCAGAATGTTCCCTGTGCCACTCTGTCTTCTAATTTGGGACTCTTCCTCTGGGCATCCTTGGCTGTaGAGTTGGGTGAAACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSRMFPVPLCLLIWDSSSGHPWL*SWVKPN Trigger: ATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCC...AGAGGAAGAGTCCCAAATTAGAAGACAGAGTGGCACAGGGAACATTCTGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | GAATTACATATAGCTCAGGGCTTACTGGGTCTGCTAGAGTATCATGTTAACTATCGCAGGTTCTGGAACTaGGCGATGGAGTCGGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: ELHIAQGLLGLLEYHVNYRRFWN*AMESGI Trigger: AATTCCCGACTCCATCGCCAAGTTCCAGAACCTGCG...ATAGTTAACATGATACTCTAGCAGACCCAGTAAGCCCTGAGCTATATGTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS-3UTR CAA 90 bp | TCTTCCAGAATGTTCCCTGTGCCACTCTGTCTTCTAATTTGGGACTCTTCCTCTTTGGGTGAAACCAAATaGGAAAAGAGGGCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRMFPVPLCLLIWDSSSLGETK*EKRAFL Trigger: GAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAA...AGAGGAAGAGTCCCAAATTAGAAGACAGAGTGGCACAGGGAACATTCTGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTAAAAATCATAAAGCAATTCAGTGGCTTGGGCAGCACCGGAGAGCCTGTCCATCAAATGTGATTTaGATGCAGTTCTTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QSKNHKAIQWLGQHRRACPSNVI*MQFFAT Trigger: TGTGGCAAAGAACTGCATCAAAATCACATTTGATGG...ACAGGCTCTCCGGTGCTGCCCAAGCCACTGAATTGCTTTATGATTTTTACTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120951.2 |
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| CDS-3UTR CAA 90 bp | ACTAGTACTTTCTATGTAAAATGTAACACCAGACTTTGTTCACCTACTTGTGGAATGGTAGTCAGCAGATaGTCATGCAGCCCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSTFYVKCNTRLCSPTCGMVVSR*SCSPTS Trigger: TGAGGTGGGGCTGCATGACAATCTGCTGACTACCAT...TCCACAAGTAGGTGAACAAAGTCTGGTGTTACATTTTACATAGAAAGTACTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| CDS CAA 90 bp | AGCTCCACAGGAAGCCCGTTGGTGGTCAGCCTGTTGTTGCTCACATaGAGGAAGAGCAAGGAGGTCATCTGGCCAATGGATTCAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTGSPLVVSLLLLT*RKSKEVIWPMDSGS Trigger: GCTCCCTGAATCCATTGGCCAGATGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACAGGCTGACCACCAACGGGCTTCCTGTGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 90 bp | GTCCAGGTGGTTAAGGCCCAGATTCACGGTGCGGATGTTCTTGAGTaGGTTCAGCTCCACAGGAAGCCCGTTGGTGGTCAGCCTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VQVVKAQIHGADVLE*VQLHRKPVGGQPVV Trigger: AACAACAGGCTGACCACCAACGGGCTTCCTGTGGAGCTGAACCAACTCAAGAACATCCGCACCGTGAATCTGGGCCTTAACCACCTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CCA 72 bp | TTAAGGCCCAGATTCACGGTGCGGATGTTCTTGAGTTaGTTCAGCTCCACAGGAAGCCCGTTGGTGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRPRFTVRMFLS*FSSTGSPLVVS Trigger: GCTGACCACCAACGGGCTTCCTGTGGAGCTGAACCAACTCAAGAACATCCGCACCGTGAATCTGGGCCTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 72 bp | AGCTCCACAGGAAGCCCGTTGGTGGTCAGCCTGTTGTaGCTCACATTGAGGAAGAGCAAGGAGGTCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSTGSPLVVSLL*LTLRKSKEVIW Trigger: CCAGATGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACAGGCTGACCACCAACGGGCTTCCTGTGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 72 bp | GTTAAGGCCCAGATTCACGGTGCGGATGTTCTTGAGTaGGTTCAGCTCCACAGGAAGCCCGTTGGTGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VKAQIHGADVLE*VQLHRKPVGGQ Trigger: CTGACCACCAACGGGCTTCCTGTGGAGCTGAACCAACTCAAGAACATCCGCACCGTGAATCTGGGCCTTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS TCA 72 bp | AGAGGGCCTTTCTCGGTGCAGAGGGGGCCATGCTCTTaGTTTTATTCAACTTGTCCCTGGCCTGTTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RGPFSVQRGPCS*FYSTCPWPVGI Trigger: GATGCCAACAGGCCAGGGACAAGTTGAATAAAATCAAGAGCATGGCCCCCTCTGCACCGAGAAAGGCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 72 bp | GGAAGCCCGTTGGTGGTCAGCCTGTTGTTGCTCACATaGAGGAAGAGCAAGGAGGTCATCTGGCCAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GSPLVVSLLLLT*RKSKEVIWPMD Trigger: ATCCATTGGCCAGATGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACAGGCTGACCACCAACGGGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 72 bp | TTCAGCTCCACAGGAAGCCCGTTGGTGGTCAGCCTGTaGTTGCTCACATTGAGGAAGAGCAAGGAGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: FSSTGSPLVVSL*LLTLRKSKEVI Trigger: GATGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACAGGCTGACCACCAACGGGCTTCCTGTGGAGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 90 bp | AGTTGGTTCAGCTCCACAGGAAGCCCGTTGGTGGTCAGCCTGTTGTaGCTCACATTGAGGAAGAGCAAGGAGGTCATCTGGCCAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SWFSSTGSPLVVSLL*LTLRKSKEVIWPMD Trigger: ATCCATTGGCCAGATGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACAGGCTGACCACCAACGGGCTTCCTGTGGAGCTGAACCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 90 bp | TTGAGTTGGTTCAGCTCCACAGGAAGCCCGTTGGTGGTCAGCCTGTaGTTGCTCACATTGAGGAAGAGCAAGGAGGTCATCTGGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LSWFSSTGSPLVVSL*LLTLRKSKEVIWPM Trigger: CATTGGCCAGATGACCTCCTTGCTCTTCCTCAATGTGAGCAACAACAGGCTGACCACCAACGGGCTTCCTGTGGAGCTGAACCAACTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 90 bp | CATTCTTCCTGGGCATCCTTGGCTGTTGAGTTGGGTGAAACCAAATaGGAAAAGAGGGCCTTTCTCGGTGCAGAGGGGGCCATGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HSSWASLAVELGETK*EKRAFLGAEGAMLL Trigger: CAAGAGCATGGCCCCCTCTGCACCGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 72 bp | TTCCTCTTTATGTTGAGCTTCTTCAGCTTGGGGAGCTaGGCGATGCTGGCGGGGATGGTAGTCAGCAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: FLFMLSFFSLGS*AMLAGMVVSRL Trigger: CAATCTGCTGACTACCATCCCCGCCAGCATCGCCAAGCTCCCCAAGCTGAAGAAGCTCAACATAAAGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
||
| CDS CAA 72 bp | GGTGCAGAGGGGGCCATGCTCTTGATTTTATTCAACTaGTCCCTGGCCTGTTGGCATCTCTGCAGACAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GAEGAMLLILFN*SLACWHLCRQD Trigger: ATCCTGTCTGCAGAGATGCCAACAGGCCAGGGACAAGTTGAATAAAATCAAGAGCATGGCCCCCTCTGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
||
| CDS CAA 72 bp | AAGAGGGCCTTTCTCGGTGCAGAGGGGGCCATGCTCTaGATTTTATTCAACTTGTCCCTGGCCTGTTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KRAFLGAEGAML*ILFNLSLACWH Trigger: ATGCCAACAGGCCAGGGACAAGTTGAATAAAATCAAGAGCATGGCCCCCTCTGCACCGAGAAAGGCCCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 90 bp | GGTGAGCGTAACCTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTaGGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTCGGTGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GERNLHSSWASLAVE*GETKLEKRAFLGAE Trigger: CTCTGCACCGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTTACGCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS CAA 90 bp | GCCTTTCTCGGTGCAGAGGGGGCCATGCTCTTGATTTTATTCAACTaGTCCCTGGCCTGTTGGCATCTCTGCAGACAGGATGAACACATA | + |
|
Preference number: 6 (lower is better) Translates to: AFLGAEGAMLLILFN*SLACWHLCRQDEHI Trigger: TATGTGTTCATCCTGTCTGCAGAGATGCCAACAGGCCAGGGACAAGTTGAATAAAATCAAGAGCATGGCCCCCTCTGCACCGAGAAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 90 bp | TGGATGGTGAGCGTAACCTCCATTCTTCCTGGGCATCCTTGGCTGTaGAGTTGGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WMVSVTSILPGHPWL*SWVKPNWKRGPFSV Trigger: CACCGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTTACGCTCACCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
||
| CDS CAA 72 bp | ATGTTCTTGAGTTGGTTCAGCTCCACAGGAAGCCCGTaGGTGGTCAGCCTGTTGTTGCTCACATTGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MFLSWFSSTGSP*VVSLLLLTLRK Trigger: CTTCCTCAATGTGAGCAACAACAGGCTGACCACCAACGGGCTTCCTGTGGAGCTGAACCAACTCAAGAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
||
| CDS TCA 72 bp | CTTGTCCCTGGCCTGTTGGCATCTCTGCAGACAGGATaGACACATATCCTTCTCTTCCACCAGATAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LVPGLLASLQTG*THILLFHQIEV Trigger: AACCTCTATCTGGTGGAAGAGAAGGATATGTGTTCATCCTGTCTGCAGAGATGCCAACAGGCCAGGGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
||
| CDS TCA 72 bp | GTGGATGGTGAGCGTAACCGTGCAGTTCTGCAAGAATaGAGCAACCATCCATACTTCTCCAGGGAGTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VDGERNRAVLQE*SNHPYFSREFR Trigger: TCTGAACTCCCTGGAGAAGTATGGATGGTTGCTTCATTCTTGCAGAACTGCACGGTTACGCTCACCATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
||
| CDS CCA 72 bp | ACCTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTTaGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TSILPGHPWLLS*VKPNWKRGPFS Trigger: CGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 |
||
| CDS CCA 72 bp | CACTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTTaGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: HSILPGHPWLLS*VKPNWKRGPFS Trigger: CGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
||
| CDS CAA 72 bp | CGCAAGATACACTTGGGGAAGGTGGTGATACCCATCTaGCTCAGGTCAAGGCGTTTTCTCCCATCAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKIHLGKVVIPI*LRSRRFLPSNV Trigger: CACATTTGATGGGAGAAAACGCCTTGACCTGAGCAAGATGGGTATCACCACCTTCCCCAAGTGTATCTTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000038956.12 ENSMUST00000120588.8 ENSMUST00000120866.8 ENSMUST00000120951.2 ENSMUST00000123822.8 |
||
| CDS CAA 72 bp | AGCGTAACCTCCATTCTTCCTGGGCATCCTTGGCTGTaGAGTTGGGTGAAACCAAATTGGAAAAGAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SVTSILPGHPWL*SWVKPNWKRGP Trigger: AGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTTACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| CDS CAA 72 bp | CACCTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTaGGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HLHSSWASLAVE*GETKLEKRAFL Trigger: GAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120866.8 |
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| CDS CAA 90 bp | CGGCTAAGATCTAGCTCATCTATATCACTGAGCCGCAAGATACACTaGGGGAAGGTGGTGATACCCATCTTGCTCAGGTCAAGGCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RLRSSSSISLSRKIH*GKVVIPILLRSRRF Trigger: AAAACGCCTTGACCTGAGCAAGATGGGTATCACCACCTTCCCCAAGTGTATCTTGCGGCTCAGTGATATAGATGAGCTAGATCTTAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 ENSMUST00000123822.8 |
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| CDS CAA 90 bp | TGTCTTAACACACTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTaGGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTCGGTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CLNTLHSSWASLAVE*GETKLEKRAFLGAE Trigger: CTCTGCACCGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGTGTGTTAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
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| CDS TCA 72 bp | AGACCATACCAAGGATGTCCAAACAGCACTGGGCTCTaGGCCTCTTCTGTCTTAACACACTCCATTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RPYQGCPNSTGL*ASSVLTHSILP Trigger: AGGAAGAATGGAGTGTGTTAAGACAGAAGAGGCTCAGAGCCCAGTGCTGTTTGGACATCCTTGGTATGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
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| CDS CAA 72 bp | TCTAGCTCATCTATATCACTGAGCCGCAAGATACACTaGGGGAAGGTGGTGATACCCATCTTGCTCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSISLSRKIH*GKVVIPILLRS Trigger: TGACCTGAGCAAGATGGGTATCACCACCTTCCCCAAGTGTATCTTGCGGCTCAGTGATATAGATGAGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038956.12 ENSMUST00000120588.8 ENSMUST00000120866.8 ENSMUST00000120951.2 ENSMUST00000123822.8 |
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| CDS CAA 72 bp | TTACTGTGCAGGTCGAGCCATCGCAGGTTCTGGAACTaGGCGATGGAGTCGGGAATTTTTCTGATCATATTC | + |
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Preference number: 6 (lower is better) Translates to: LLCRSSHRRFWN*AMESGIFLIIF Trigger: GAATATGATCAGAAAAATTCCCGACTCCATCGCCAAGTTCCAGAACCTGCGATGGCTCGACCTGCACAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 ENSMUST00000123822.8 |
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| CDS CAA 72 bp | AACCTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTaGGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: NLHSSWASLAVE*GETKLEKRAFL Trigger: GAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| CDS CAA 72 bp | GATGGTGAGCGTAACCTCCATTCTTCCTGGGCATCCTaGGCTGTTGAGTTGGGTGAAACCAAATTGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: DGERNLHSSWAS*AVELGETKLEK Trigger: CTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGGTTACGCTCACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038956.12 |
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| CDS CAA 72 bp | ACACTCCATTCTTCCTGGGCATCCTTGGCTGTTGAGTaGGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TLHSSWASLAVE*GETKLEKRAFL Trigger: GAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
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| CDS CAA 90 bp | TCTTCTGTCTTAACACACTCCATTCTTCCTGGGCATCCTTGGCTGTaGAGTTGGGTGAAACCAAATTGGAAAAGAGGGCCTTTCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSVLTHSILPGHPWL*SWVKPNWKRGPFSV Trigger: CACCGAGAAAGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGTGTGTTAAGACAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
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| CDS CAA 72 bp | TTAACACACTCCATTCTTCCTGGGCATCCTTGGCTGTaGAGTTGGGTGAAACCAAATTGGAAAAGAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LTHSILPGHPWL*SWVKPNWKRGP Trigger: AGGCCCTCTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGTGTGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
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| CDS GCA 72 bp | ATTTTATTCAACTTGTCCCTGGCCTGTTGGCATCTCTaGAGACAGGATGAACACATATCCTTCTCTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: ILFNLSLACWHL*RQDEHISFSST Trigger: GGTGGAAGAGAAGGATATGTGTTCATCCTGTCTGCAGAGATGCCAACAGGCCAGGGACAAGTTGAATAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038956.12 ENSMUST00000120866.8 ENSMUST00000120951.2 |
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| CDS CAA 90 bp | CCCATCTTGCTCAGGTCAAGGCGTTTTCTCCCATCAAATGTGATTTaGATGCAGTTCTTTGCCACATTAAGGGTGATCTTTTTGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PILLRSRRFLPSNVI*MQFFATLRVIFLPL Trigger: CAAGGGCAAAAAGATCACCCTTAATGTGGCAAAGAACTGCATCAAAATCACATTTGATGGGAGAAAACGCCTTGACCTGAGCAAGATGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000038956.12 ENSMUST00000120588.8 ENSMUST00000120866.8 ENSMUST00000120951.2 ENSMUST00000123822.8 |
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| CDS CAA 72 bp | TTCTGTCTTAACACACTCCATTCTTCCTGGGCATCCTaGGCTGTTGAGTTGGGTGAAACCAAATTGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: FCLNTLHSSWAS*AVELGETKLEK Trigger: CTTTTCCAATTTGGTTTCACCCAACTCAACAGCCAAGGATGCCCAGGAAGAATGGAGTGTGTTAAGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120951.2 |
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