Pregenerated sensors for LRRC17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039883Ensembl transcript IDs: ENSMUST00000035651.6
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCTCAGCTTTAGTGTTGGAGCTGTGGACATGTACCAGCAGTTCTaGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGG | + |
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Preference number: 1 (lower is better) Translates to: CLSFSVGAVDMYQQF*PTVYSCHGSLIRRR Trigger: CCGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAGCTCCAACACTAAAGCTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR CCA 90 bp | GGTTGGCACCACGGTCCTCCTGCCTCAGCTTTAGTGTTGGAGCTGTaGACATGTACCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATG | + |
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Preference number: 1 (lower is better) Translates to: GWHHGPPASALVLEL*TCTSSSGPLCTLVM Trigger: CATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAGCTCCAACACTAAAGCTGAGGCAGGAGGACCGTGGTGCCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR TCA 90 bp | TGTACCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTaGTCCGCAGGCGGGCAGGTTTCCCTAGATTATCAAACTTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: CTSSSGPLCTLVMGV*SAGGQVSLDYQTCH Trigger: GTGGCAAGTTTGATAATCTAGGGAAACCTGCCCGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTCTTTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCCAAGCGCTCTACCACTaGGCTAAATCCCCAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: GSFETVSGFVAQVGTTVLQALYH*AKSPNP Trigger: TGGGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTG...GAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAAAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR CAA 90 bp | AGCCGAATAATTGTTGCTAACAAATCAGAGGAACCTCCTTGTAGCTaGATTACCCTGCATAATAGGTATCACAATTCATCCAAATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SRIIVANKSEEPPCS*ITLHNRYHNSSKCF Trigger: AAAACATTTGGATGAATTGTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTTAGCAACAATTATTCGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR CCA 72 bp | CACGGTCCTCCTGCCTCAGCTTTAGTGTTGGAGCTGTaGACATGTACCAGCAGTTCTGGCCCACTGTGTACT | + |
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Preference number: 3 (lower is better) Translates to: HGPPASALVLEL*TCTSSSGPLCT Trigger: AGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAGCTCCAACACTAAAGCTGAGGCAGGAGGACCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR-3UTR CAA 90 bp | TTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGGGCAGGTGAACCTCCTTGTAGCTaGATTACCCTGCATAATAGG | + |
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Preference number: 3 (lower is better) Translates to: FWPTVYSCHGSLIRRRAGEPPCS*ITLHNR Trigger: CCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTC...ACCTGCCCGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTCTTTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCGCCTCAGCTTTAGTGTaGGAGCTGTGGACATGTACC | + |
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Preference number: 3 (lower is better) Translates to: GSFETVSGFVAQVGTTVLASALV*ELWTCT Trigger: GGTACATGTCCACAGCTCCAACACTAAAGCTGAGGC...GAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAAAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR TCA 72 bp | AGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTaGTCCGCAGGCGGGCAGGTTTCCCTAGATTATCAA | + |
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Preference number: 3 (lower is better) Translates to: SSGPLCTLVMGV*SAGGQVSLDYQ Trigger: TTGATAATCTAGGGAAACCTGCCCGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR TCA 72 bp | CCCTCATGTCACCAGTGTGGAATAGTTGGGTTCTTTTaGGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: PSCHQCGIVGFF*DCFWLCSPGWH Trigger: GTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAAAGAACCCAACTATTCCACACTGGTGACATGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR CCA 72 bp | TTTAGTGTTGGAGCTGTGGACATGTACCAGCAGTTCTaGCCCACTGTGTACTCTTGTCATGGGAGTCTGATC | + |
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Preference number: 3 (lower is better) Translates to: FSVGAVDMYQQF*PTVYSCHGSLI Trigger: GATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAGCTCCAACACTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| 3UTR TCA 72 bp | TTGTTGCTAACAAATCAGAGGAACCTCCTTGTAGCTTaGTTACCCTGCATAATAGGTATCACAATTCATCCA | + |
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Preference number: 3 (lower is better) Translates to: LLLTNQRNLLVA*LPCIIGITIHP Trigger: TGGATGAATTGTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTTAGCAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | TTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGGGCAGGTCACCACGGCCGTGGCTaGGGCTGGGATTGCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: FWPTVYSCHGSLIRRRAGHHGRG*GWDCLG Trigger: GCCAAGGCAATCCCAGCCGCAGCCACGGCCGTGGTG...ACCTGCCCGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR TCA 90 bp | AGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAAACCCTGGTGCATAGCGTTTaGCTGGGCTGGAGCCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RALRLLGKRSTTELNPQTLVHSV*LGWSPS Trigger: GGAGGGGCTCCAGCCCAGTCAAACGCTATGCACCAG...GGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | AGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAAACCCGTCTCAGGGTAGGCTaGCAGCTTGTCCTTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RALRLLGKRSTTELNPQTRLRVG*QLVLGA Trigger: TGCCCCAAGGACAAGCTGCCAGCCTACCCTGAGACG...GGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | AGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAAACCCGGCTGGGATTGCCTTaGCTTCTCAAAACACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RALRLLGKRSTTELNPQTRLGLP*LLKTPG Trigger: CCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCG...GGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | TTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCCTGCCTGTGGGCTTCCGCACTTaGCGTAGTTCCCCAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: FETVSGFVAQVGTTVLLPVGFRT*RSSPDS Trigger: GGAATCTGGGGAACTACGCCAAGTGCGGAAGCCCAC...AGGCAGGAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR TCA 90 bp | TTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGGGCAGGTTGGGTCGGAGCTGTCTaGTTTTGTTGGATGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: FWPTVYSCHGSLIRRRAGWVGAV*FCWMTG Trigger: ACCTGTCATCCAACAAAATCAGACAGCTCCGACCCA...ACCTGCCCGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | CCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGTCTCTAGCTCACAAGTaGAGTGCCAGGGGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PAVLAHCVLLSWESDPQASLAHK*SARGCH Trigger: ATGACAACCCCTGGCACTGCACTTGTGAGCTAGAGA...CGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | CCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGGTCAGCACCTTGATCTaGTTGTGCTGCAACAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PAVLAHCVLLSWESDPQAVSTLI*LCCNKR Trigger: CCTCTTGTTGCAGCACAACCAGATCAAGGTGCTGAC...CGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | AGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAAACCAGTGGAGTCTGCTTCTaGCCTGATGACTGCGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: RALRLLGKRSTTELNPQTSGVCF*PDDCGY Trigger: ATACCCGCAGTCATCAGGCCAGAAGCAGACTCCACT...GGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR TCA 90 bp | CCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGTCCAAGGGTTATCTCTaGGCCACAGGAGTTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PAVLAHCVLLSWESDPQASKGYL*ATGVSE Trigger: TTCTGAAACTCCTGTGGCTCAGAGATAACCCTTGGA...CGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | AACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATAGGTATCACGGCTGGAGCCCCTCCTaGCACCACGGCCGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NKSEEPPCSLITLHNRYHGWSPS*HHGRGC Trigger: GCAGCCACGGCCGTGGTGGCAGGAGGGGCTCCAGCC...GTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | AGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAAACCGGTTTGGGGTCCAGTTaGTCCTTCTCCTCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: RALRLLGKRSTTELNPQTGLGSS*SFSSSS Trigger: TGATGAAGAGGAGAAGGAGCAACTGGACCCCAAACC...GGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | CCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGCTGGCAGCTTGTCCTTaGGGCATTCTTCATAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PAVLAHCVLLSWESDPQALAACP*GILHSN Trigger: GTTACTATGAAGAATGCCCCAAGGACAAGCTGCCAG...CGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | CCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGTGTCTGGAGGGATGTTaGTTGGGACTTTCTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: PAVLAHCVLLSWESDPQACLEGC*LGLSST Trigger: AGTTGAAGAAAGTCCCAAGCAACATCCCTCCAGACA...CGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | CCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGCACTCTGTGCTTCTTTaGTGGGTGATCTCTGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: PAVLAHCVLLSWESDPQAHSVLL*WVISVY Trigger: ATACACAGAGATCACCCAGCAAAGAAGCACAGAGTG...CGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | GGTTCTTTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCATCACAAGGCAGGCCTaGTGCATAGCGTTTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: GSFETVSGFVAQVGTTVLITRQA*CIAFDW Trigger: CCAGTCAAACGCTATGCACCAGGCCTGCCTTGTGAT...GAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAAAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR TCA 90 bp | GGTTCTTTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCATGTGCAGCAAATCTTaGGGCCAGTCAGGCAACACA | + |
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Preference number: 4 (lower is better) Translates to: GSFETVSGFVAQVGTTVLMCSKS*GQSGNT Trigger: TGTGTTGCCTGACTGGCCTCAAGATTTGCTGCACAT...GAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAAAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR TCA 90 bp | GGTTCTTTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCTCATCACACAGCTCTTaGGGTTTTAGCTGCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: GSFETVSGFVAQVGTTVLSSHSS*GFSCSN Trigger: GTTGCTGCAGCTAAAACCTCAAGAGCTGTGTGATGA...GAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAAAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | GGTTCTTTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCAGTAGAGGTAGTGGATaGTGTAGTCACACCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GSFETVSGFVAQVGTTVLSRGSG*CSHTSK Trigger: CTTGGAGGTGTGACTACAGCATCCACTACCTCTACT...GAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAAAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR TCA 90 bp | CTGTGGACATGTACCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGCTTCTTTGCTGGGTaGTCTCTGTGTATTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LWTCTSSSGPLCTLVMGVCFFAG*SLCIFC Trigger: GCAGAAAATACACAGAGATCACCCAGCAAAGAAGCA...GACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | CTGTGGACATGTACCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCCTTTTTATTTCTCAGTaGTGGTGGGCTTCCGCACTT | + |
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Preference number: 4 (lower is better) Translates to: LWTCTSSSGPLCTLVMGVLFISQ*WWASAL Trigger: AAGTGCGGAAGCCCACCAGCACTGAGAAATAAAAAG...GACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | ATTGTTGCTAACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATCACCAGGGCTGGACTTaGGAGGCTCAGCAGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IVANKSEEPPCSLITLHNHQGWT*EAQQLC Trigger: GCAGAGCTGCTGAGCCTCGCAAGTCCAGCCCTGGTG...ATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTTAGCAACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | AACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATAGGTATCACTGCATAGCGTTTGACTaGGCTGGAGCCCCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NKSEEPPCSLITLHNRYHCIAFD*AGAPPA Trigger: GGCAGGAGGGGCTCCAGCCCAGTCAAACGCTATGCA...GTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | TTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCCTGCCTTCTCTGTGTATTTTCTaGCATTCATCATCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FETVSGFVAQVGTTVLLPSLCIF*HSSSSV Trigger: CACAGAAGATGATGAATGGCAGAAAATACACAGAGA...AGGCAGGAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | AACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATAGGTATCACGAGGCTCAGCAGCTCTaGAAAGGCAGAACAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: NKSEEPPCSLITLHNRYHEAQQL*KGRTEA Trigger: TGCTTCTGTTCTGCCTTTGCAGAGCTGCTGAGCCTC...GTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR GCA 90 bp | ATTGTTGCTAACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATACAAGGCAGGCCTGGTaGATAGCGTTTGACTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: IVANKSEEPPCSLITLHNTRQAW*IAFDWA Trigger: AGCCCAGTCAAACGCTATGCACCAGGCCTGCCTTGT...ATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTTAGCAACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | AACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATAGGTATCACCAGATTCCGGTTCCGTaGAATCTGCAGCATGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: NKSEEPPCSLITLHNRYHQIPVP*NLQHGN Trigger: ATTTCCATGCTGCAGATTCCACGGAACCGGAATCTG...GTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | ATTGTTGCTAACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATCCTCGCTCTCAATTTTaGAGATCTCGTTCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: IVANKSEEPPCSLITLHNPRSQF*RSRSAA Trigger: TGCAGCAGAACGAGATCTCCAAAATTGAGAGCGAGG...ATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTTAGCAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CCA 90 bp | AACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATAGGTATCACAGTCTAGGGTTTGTATaGGAAACACGTAATTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NKSEEPPCSLITLHNRYHSLGFV*ETRNCG Trigger: GCCACAATTACGTGTTTCCCATACAAACCCTAGACT...GTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS GCA 90 bp | GGCTGGAGCCCCTCCTGCCACCACGGCCGTGGCTGCGGCTGGGATTaGCTTGGCTTCTCAAAACACCAGGGCTGGACTTGCGAGGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: GWSPSCHHGRGCGWD*LGFSKHQGWTCEAQ Trigger: CTGAGCCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGCAGCCACGGCCGTGGTGGCAGGAGGGGCTCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CCA 90 bp | GAGCCCCTCCTGCCACCACGGCCGTGGCTGCGGCTGGGATTGCCTTaGCTTCTCAAAACACCAGGGCTGGACTTGCGAGGCTCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: EPLLPPRPWLRLGLP*LLKTPGLDLRGSAA Trigger: AGCTGCTGAGCCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGCAGCCACGGCCGTGGTGGCAGGAGGGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CAA 90 bp | CCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTGATCCGCAGGCGCCCGACACTTGGGGTTaGGGGTCCAGTTGCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PAVLAHCVLLSWESDPQAPDTWG*GSSCSF Trigger: GAAGGAGCAACTGGACCCCAAACCCCAAGTGTCGGG...CGCCTGCGGATCAGACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CCA 90 bp | GTGGAGTCTGCTTCTGGCCTGATGACTGCGGGTATCCCCGACACTTaGGGTTTGGGGTCCAGTTGCTCCTTCTCCTCTTCATCACACAGC | + |
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Preference number: 5 (lower is better) Translates to: VESASGLMTAGIPDT*GLGSSCSFSSSSHS Trigger: GCTGTGTGATGAAGAGGAGAAGGAGCAACTGGACCCCAAACCCCAAGTGTCGGGGATACCCGCAGTCATCAGGCCAGAAGCAGACTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS GCA 90 bp | TGCGGCTGGGATTGCCTTGGCTTCTCAAAACACCAGGGCTGGACTTaGGAGGCTCAGCAGCTCTGCAAAGGCAGAACAGAAGCAAGATGG | + |
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Preference number: 5 (lower is better) Translates to: CGWDCLGFSKHQGWT*EAQQLCKGRTEARW Trigger: CCATCTTGCTTCTGTTCTGCCTTTGCAGAGCTGCTGAGCCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS-3UTR CAA 90 bp | AGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAAACCCATGTGCAGCAAATCTaGAGGCCAGTCAGGCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: RALRLLGKRSTTELNPQTHVQQI*RPVRQH Trigger: GTGTTGCCTGACTGGCCTCAAGATTTGCTGCACATG...GGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAAACCCCCACAGACCACCCTTaGTATTCTTCCGGCGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RALRLLGKRSTTELNPQTPTDHP*YSSGVL Trigger: CAAAACGCCGGAAGAATACAAAGGGTGGTCTGTGGG...GGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | CTGTGGACATGTACCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCGGGTTTGGGGTCCAGTaGCTCCTTCTCCTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LWTCTSSSGPLCTLVMGVGFGVQ*LLLLFI Trigger: GATGAAGAGGAGAAGGAGCAACTGGACCCCAAACCC...GACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS TCA 90 bp | CGTAGTTCCCCAGATTCCGGTTCCGTGGAATCTGCAGCATGGAAATaGGCGTCTCTAGCTCACAAGTGCAGTGCCAGGGGTTGTCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSSPDSGSVESAAWK*ASLAHKCSARGCHR Trigger: TCTATGACAACCCCTGGCACTGCACTTGTGAGCTAGAGACGCTCATTTCCATGCTGCAGATTCCACGGAACCGGAATCTGGGGAACTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 90 bp | CTGTGTCCTGGTCAAACGTCTCAGGGTAGGCTGGCAGCTTGTCCTTaGGGCATTCTTCATAGTAACTCCGTACGTATTTCCCCACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LCPGQTSQGRLAACP*GILHSNSVRISPQT Trigger: GGTCTGTGGGGAAATACGTACGGAGTTACTATGAAGAATGCCCCAAGGACAAGCTGCCAGCCTACCCTGAGACGTTTGACCAGGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | CTGTGGACATGTACCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCTCCTCTGTCAGCACCTaGATCTGGTTGTGCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LWTCTSSSGPLCTLVMGVSSVST*IWLCCN Trigger: GTTGCAGCACAACCAGATCAAGGTGCTGACAGAGGA...GACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAAACCAAGTTCTGCAGGCTGTaGTTTGATAAGTCGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RALRLLGKRSTTELNPQTKFCRL*FDKSSS Trigger: AGAGCTCGACTTATCAAACAACAGCCTGCAGAACTT...GGTTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | CTGTGGACATGTACCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCACATCTTCAAACTCCTaGGGTCGGAGCTGTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LWTCTSSSGPLCTLVMGVTSSNS*GRSCLI Trigger: AATCAGACAGCTCCGACCCAAGGAGTTTGAAGATGT...GACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 90 bp | CCATTCATCATCTTCTGTGTCCTGGTCAAACGTCTCAGGGTAGGCTaGCAGCTTGTCCTTGGGGCATTCTTCATAGTAACTCCGTACGTA | + |
|
Preference number: 5 (lower is better) Translates to: PFIIFCVLVKRLRVG*QLVLGAFFIVTPYV Trigger: TACGTACGGAGTTACTATGAAGAATGCCCCAAGGACAAGCTGCCAGCCTACCCTGAGACGTTTGACCAGGACACAGAAGATGATGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | GGTTCTTTTGAGACTGTTTCTGGCTTTGTAGCCCAGGTTGGCACCACGGTCCTCAGCTGTCTGATTTTGTaGGATGACAGGTCAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSFETVSGFVAQVGTTVLSCLIL*DDRSSF Trigger: GAAGCTTGACCTGTCATCCAACAAAATCAGACAGCT...GAGGACCGTGGTGCCAACCTGGGCTACAAAGCCAGAAACAGTCTCAAAAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS TCA 90 bp | AACATCTTCAAACTCCTTGGGTCGGAGCTGTCTGATTTTGTTGGATaGCAGGTCAAGCTTCACTATGTCTGGAGGGATGTTGCTTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NIFKLLGSELSDFVG*QVKLHYVWRDVAWD Trigger: GTCCCAAGCAACATCCCTCCAGACATAGTGAAGCTTGACCTGTCATCCAACAAAATCAGACAGCTCCGACCCAAGGAGTTTGAAGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 90 bp | GTACGTATTTCCCCACAGACCACCCTTTGTATTCTTCCGGCGTTTTaGATTCCAGACCGTTATAGTGGACGTTGTAGTGGTGCTTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: VRISPQTTLCILPAF*IPDRYSGRCSGALT Trigger: GGTTAAAGCACCACTACAACGTCCACTATAACGGTCTGGAATGCAAAACGCCGGAAGAATACAAAGGGTGGTCTGTGGGGAAATACGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 90 bp | TTGGGACTTTCTTCAACTCTTTCCTCTTGCAGTCTAGGGTTTGTATaGGAAACACGTAATTGTGGCACAGAGTGGAGTCTGCTTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLSSTLSSCSLGFV*ETRNCGTEWSLLLA Trigger: GGCCAGAAGCAGACTCCACTCTGTGCCACAATTACGTGTTTCCCATACAAACCCTAGACTGCAAGAGGAAAGAGTTGAAGAAAGTCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | ATTGTTGCTAACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATGCGGCTGGGATTGCCTaGGCTTCTCAAAACACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IVANKSEEPPCSLITLHNAAGIA*ASQNTR Trigger: CCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGC...ATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTTAGCAACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | CTGTGGACATGTACCAGCAGTTCTGGCCCACTGTGTACTCTTGTCATGGGAGTCAACTTAGCAAACATGTaGTTCTTTAACACGCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LWTCTSSSGPLCTLVMGVNLANM*FFNTRI Trigger: AATCCGCGTGTTAAAGAACAACATGTTTGCTAAGTT...GACTCCCATGACAAGAGTACACAGTGGGCCAGAACTGCTGGTACATGTCCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS TCA 90 bp | TCTTTAGTTCGTGAACATCTTCAAACTCCTTGGGTCGGAGCTGTCTaGTTTTGTTGGATGACAGGTCAAGCTTCACTATGTCTGGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLVREHLQTPWVGAV*FCWMTGQASLCLEG Trigger: TCCCTCCAGACATAGTGAAGCTTGACCTGTCATCCAACAAAATCAGACAGCTCCGACCCAAGGAGTTTGAAGATGTTCACGAACTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 90 bp | AAACCAAAGAACGCCTCGCTCTCAATTTTGGAGATCTCGTTCTGCTaGAGGTCCAGGCTCTTCAGCCTTTTAAACTTAGCAAACATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KPKNASLSILEISFC*RSRLFSLLNLANML Trigger: CAACATGTTTGCTAAGTTTAAAAGGCTGAAGAGCCTGGACCTGCAGCAGAACGAGATCTCCAAAATTGAGAGCGAGGCGTTCTTTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | AACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATAGGTATCACAGCACCTTGATCTGGTaGTGCTGCAACAAGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKSEEPPCSLITLHNRYHSTLIW*CCNKRV Trigger: CACCCTCTTGTTGCAGCACAACCAGATCAAGGTGCT...GTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 90 bp | TTTAAACCAAAGAACGCCTCGCTCTCAATTTTGGAGATCTCGTTCTaGTGCAGGTCCAGGCTCTTCAGCCTTTTAAACTTAGCAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: FKPKNASLSILEISF*CRSRLFSLLNLANM Trigger: CATGTTTGCTAAGTTTAAAAGGCTGAAGAGCCTGGACCTGCAGCAGAACGAGATCTCCAAAATTGAGAGCGAGGCGTTCTTTGGTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 90 bp | TTTTGTTGGATGACAGGTCAAGCTTCACTATGTCTGGAGGGATGTTaGTTGGGACTTTCTTCAACTCTTTCCTCTTGCAGTCTAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FCWMTGQASLCLEGC*LGLSSTLSSCSLGF Trigger: AAACCCTAGACTGCAAGAGGAAAGAGTTGAAGAAAGTCCCAAGCAACATCCCTCCAGACATAGTGAAGCTTGACCTGTCATCCAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | AACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATAGGTATCACCGCGGATTTTGTTTCTaGCTAGCAGCATGTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NKSEEPPCSLITLHNRYHRGFCF*LAACAA Trigger: TGCTGCACATGCTGCTAGCAAGAAACAAAATCCGCG...GTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | ATTGTTGCTAACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATCGGAGCTGTCTGATTTaGTTGGATGACAGGTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IVANKSEEPPCSLITLHNRSCLI*LDDRSS Trigger: GCTTGACCTGTCATCCAACAAAATCAGACAGCTCCG...ATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTTAGCAACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | AACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATAGGTATCACTCACTCTGTGCTTCTTaGCTGGGTGATCTCTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NKSEEPPCSLITLHNRYHSLCAS*LGDLCV Trigger: TACACAGAGATCACCCAGCAAAGAAGCACAGAGTGA...GTGATACCTATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS-3UTR CAA 90 bp | ATTGTTGCTAACAAATCAGAGGAACCTCCTTGTAGCTTGATTACCCTGCATAATTTTAACACGCGGATTTaGTTTCTTGCTAGCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: IVANKSEEPPCSLITLHNFNTRI*FLASSM Trigger: CATGCTGCTAGCAAGAAACAAAATCCGCGTGTTAAA...ATTATGCAGGGTAATCAAGCTACAAGGAGGTTCCTCTGATTTGTTAGCAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CAA 90 bp | GGAGCCCCTCCTGCCACCACGGCCGTGGCTGCGGCTGGGATTGCCTaGGCTTCTCAAAACACCAGGGCTGGACTTGCGAGGCTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAPPATTAVAAAGIA*ASQNTRAGLARLSS Trigger: GCTGCTGAGCCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGCAGCCACGGCCGTGGTGGCAGGAGGGGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CAA 90 bp | GGGCTGGAGCCCCTCCTGCCACCACGGCCGTGGCTGCGGCTGGGATaGCCTTGGCTTCTCAAAACACCAGGGCTGGACTTGCGAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLEPLLPPRPWLRLG*PWLLKTPGLDLRGS Trigger: TGAGCCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGCAGCCACGGCCGTGGTGGCAGGAGGGGCTCCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | CTGGGCTGGAGCCCCTCCTGCCACCACGGCCGTGGCTaGGGCTGGGATTGCCTTGGCTTCTCAAAACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGWSPSCHHGRG*GWDCLGFSKHQ Trigger: CTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGCAGCCACGGCCGTGGTGGCAGGAGGGGCTCCAGCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 72 bp | TGGAGCCCCTCCTGCCACCACGGCCGTGGCTGCGGCTaGGATTGCCTTGGCTTCTCAAAACACCAGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WSPSCHHGRGCG*DCLGFSKHQGW Trigger: CCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGCAGCCACGGCCGTGGTGGCAGGAGGGGCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CAA 72 bp | CCTGCCACCACGGCCGTGGCTGCGGCTGGGATTGCCTaGGCTTCTCAAAACACCAGGGCTGGACTTGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PATTAVAAAGIA*ASQNTRAGLAR Trigger: CCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCCGCAGCCACGGCCGTGGTGGCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 72 bp | GGCTGGGATTGCCTTGGCTTCTCAAAACACCAGGGCTaGACTTGCGAGGCTCAGCAGCTCTGCAAAGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GWDCLGFSKHQG*TCEAQQLCKGR Trigger: TCTGCCTTTGCAGAGCTGCTGAGCCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 72 bp | GCTTCTGGCCTGATGACTGCGGGTATCCCCGACACTTaGGGTTTGGGGTCCAGTTGCTCCTTCTCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASGLMTAGIPDT*GLGSSCSFSSS Trigger: TGAAGAGGAGAAGGAGCAACTGGACCCCAAACCCCAAGTGTCGGGGATACCCGCAGTCATCAGGCCAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | AAACACCAGGGCTGGACTTGCGAGGCTCAGCAGCTCTaGAAAGGCAGAACAGAAGCAAGATGGCCACTATGC | + |
|
Preference number: 6 (lower is better) Translates to: KHQGWTCEAQQL*KGRTEARWPLC Trigger: GCATAGTGGCCATCTTGCTTCTGTTCTGCCTTTGCAGAGCTGCTGAGCCTCGCAAGTCCAGCCCTGGTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 72 bp | AAACACGTAATTGTGGCACAGAGTGGAGTCTGCTTCTaGCCTGATGACTGCGGGTATCCCCGACACTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KHVIVAQSGVCF*PDDCGYPRHLG Trigger: CCCCAAGTGTCGGGGATACCCGCAGTCATCAGGCCAGAAGCAGACTCCACTCTGTGCCACAATTACGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CAA 72 bp | GGATTGCCTTGGCTTCTCAAAACACCAGGGCTGGACTaGCGAGGCTCAGCAGCTCTGCAAAGGCAGAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GLPWLLKTPGLD*RGSAALQRQNR Trigger: TCTGTTCTGCCTTTGCAGAGCTGCTGAGCCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | GATTGCCTTGGCTTCTCAAAACACCAGGGCTGGACTTaGGAGGCTCAGCAGCTCTGCAAAGGCAGAACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DCLGFSKHQGWT*EAQQLCKGRTE Trigger: TTCTGTTCTGCCTTTGCAGAGCTGCTGAGCCTCGCAAGTCCAGCCCTGGTGTTTTGAGAAGCCAAGGCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | TATGGGAAACACGTAATTGTGGCACAGAGTGGAGTCTaGTTCTGGCCTGATGACTGCGGGTATCCCCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: YGKHVIVAQSGV*FWPDDCGYPRH Trigger: GTGTCGGGGATACCCGCAGTCATCAGGCCAGAAGCAGACTCCACTCTGTGCCACAATTACGTGTTTCCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 72 bp | TTCATGGAGATAAGTGTACACATCACAAGGCAGGCCTaGTGCATAGCGTTTGACTGGGCTGGAGCCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FMEISVHITRQA*CIAFDWAGAPP Trigger: AGGAGGGGCTCCAGCCCAGTCAAACGCTATGCACCAGGCCTGCCTTGTGATGTGTACACTTATCTCCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 72 bp | GGTCAAACGTCTCAGGGTAGGCTGGCAGCTTGTCCTTaGGGCATTCTTCATAGTAACTCCGTACGTATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GQTSQGRLAACP*GILHSNSVRIS Trigger: GGAAATACGTACGGAGTTACTATGAAGAATGCCCCAAGGACAAGCTGCCAGCCTACCCTGAGACGTTTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | TCCCCACAGACCACCCTTTGTATTCTTCCGGCGTTTTaGATTCCAGACCGTTATAGTGGACGTTGTAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPQTTLCILPAF*IPDRYSGRCSG Trigger: ACCACTACAACGTCCACTATAACGGTCTGGAATGCAAAACGCCGGAAGAATACAAAGGGTGGTCTGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CCA 72 bp | ATCTTCTGTGTCCTGGTCAAACGTCTCAGGGTAGGCTaGCAGCTTGTCCTTGGGGCATTCTTCATAGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: IFCVLVKRLRVG*QLVLGAFFIVT Trigger: AGTTACTATGAAGAATGCCCCAAGGACAAGCTGCCAGCCTACCCTGAGACGTTTGACCAGGACACAGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | AACGCCTCGCTCTCAATTTTGGAGATCTCGTTCTGCTaGAGGTCCAGGCTCTTCAGCCTTTTAAACTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: NASLSILEISFC*RSRLFSLLNLA Trigger: TGCTAAGTTTAAAAGGCTGAAGAGCCTGGACCTGCAGCAGAACGAGATCTCCAAAATTGAGAGCGAGGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CAA 72 bp | TCTTCAAACTCCTTGGGTCGGAGCTGTCTGATTTTGTaGGATGACAGGTCAAGCTTCACTATGTCTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSNSLGRSCLIL*DDRSSFTMSGG Trigger: CCCTCCAGACATAGTGAAGCTTGACCTGTCATCCAACAAAATCAGACAGCTCCGACCCAAGGAGTTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS TCA 72 bp | AAACTCCTTGGGTCGGAGCTGTCTGATTTTGTTGGATaGCAGGTCAAGCTTCACTATGTCTGGAGGGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: KLLGSELSDFVG*QVKLHYVWRDV Trigger: AACATCCCTCCAGACATAGTGAAGCTTGACCTGTCATCCAACAAAATCAGACAGCTCCGACCCAAGGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | AAGAACGCCTCGCTCTCAATTTTGGAGATCTCGTTCTaGTGCAGGTCCAGGCTCTTCAGCCTTTTAAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: KNASLSILEISF*CRSRLFSLLNL Trigger: TAAGTTTAAAAGGCTGAAGAGCCTGGACCTGCAGCAGAACGAGATCTCCAAAATTGAGAGCGAGGCGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS CAA 90 bp | AGGGTGGTAAGTTTATTTAAACCAAAGAACGCCTCGCTCTCAATTTaGGAGATCTCGTTCTGCTGCAGGTCCAGGCTCTTCAGCCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RVVSLFKPKNASLSI*EISFCCRSRLFSLL Trigger: TAAAAGGCTGAAGAGCCTGGACCTGCAGCAGAACGAGATCTCCAAAATTGAGAGCGAGGCGTTCTTTGGTTTAAATAAACTTACCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS TCA 72 bp | CGTGAACATCTTCAAACTCCTTGGGTCGGAGCTGTCTaGTTTTGTTGGATGACAGGTCAAGCTTCACTATGT | + |
|
Preference number: 6 (lower is better) Translates to: REHLQTPWVGAV*FCWMTGQASLC Trigger: ACATAGTGAAGCTTGACCTGTCATCCAACAAAATCAGACAGCTCCGACCCAAGGAGTTTGAAGATGTTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS TCA 72 bp | AGTGGATGCTGTAGTCACACCTCCAAGGGTTATCTCTaGGCCACAGGAGTTTCAGAAAGTACAAATCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SGCCSHTSKGYL*ATGVSESTNPL Trigger: TAGAGGATTTGTACTTTCTGAAACTCCTGTGGCTCAGAGATAACCCTTGGAGGTGTGACTACAGCATCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | AACGCCTCCTCTGTCAGCACCTTGATCTGGTTGTGCTaGAACAAGAGGGTGGTAAGTTTATTTAAACCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NASSVSTLIWLC*NKRVVSLFKPK Trigger: CTTTGGTTTAAATAAACTTACCACCCTCTTGTTGCAGCACAACCAGATCAAGGTGCTGACAGAGGAGGCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
||
| CDS GCA 72 bp | ATGAACGCCTCCTCTGTCAGCACCTTGATCTGGTTGTaGTGCAACAAGAGGGTGGTAAGTTTATTTAAACCA | + |
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Preference number: 6 (lower is better) Translates to: MNASSVSTLIWL*CNKRVVSLFKP Trigger: TGGTTTAAATAAACTTACCACCCTCTTGTTGCAGCACAACCAGATCAAGGTGCTGACAGAGGAGGCGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CCA 72 bp | GTTTATTTAAACCAAAGAACGCCTCGCTCTCAATTTTaGAGATCTCGTTCTGCTGCAGGTCCAGGCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VYLNQRTPRSQF*RSRSAAGPGSS Trigger: TGAAGAGCCTGGACCTGCAGCAGAACGAGATCTCCAAAATTGAGAGCGAGGCGTTCTTTGGTTTAAATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CCA 72 bp | TCTTCAACTCTTTCCTCTTGCAGTCTAGGGTTTGTATaGGAAACACGTAATTGTGGCACAGAGTGGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSTLSSCSLGFV*ETRNCGTEWSL Trigger: CAGACTCCACTCTGTGCCACAATTACGTGTTTCCCATACAAACCCTAGACTGCAAGAGGAAAGAGTTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CAA 72 bp | AGTTTATTTAAACCAAAGAACGCCTCGCTCTCAATTTaGGAGATCTCGTTCTGCTGCAGGTCCAGGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLFKPKNASLSI*EISFCCRSRLF Trigger: GAAGAGCCTGGACCTGCAGCAGAACGAGATCTCCAAAATTGAGAGCGAGGCGTTCTTTGGTTTAAATAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CAA 72 bp | ACATCTTCAAACTCCTTGGGTCGGAGCTGTCTGATTTaGTTGGATGACAGGTCAAGCTTCACTATGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TSSNSLGRSCLI*LDDRSSFTMSG Trigger: TCCAGACATAGTGAAGCTTGACCTGTCATCCAACAAAATCAGACAGCTCCGACCCAAGGAGTTTGAAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CAA 90 bp | TGCTGCAGGTCCAGGCTCTTCAGCCTTTTAAACTTAGCAAACATGTaGTTCTTTAACACGCGGATTTTGTTTCTTGCTAGCAGCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: CCRSRLFSLLNLANM*FFNTRILFLASSMC Trigger: GCACATGCTGCTAGCAAGAAACAAAATCCGCGTGTTAAAGAACAACATGTTTGCTAAGTTTAAAAGGCTGAAGAGCCTGGACCTGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS TCA 72 bp | ATGCCATTGCTGCTTAGGTTTAACTTCTTTAGTTCGTaGACATCTTCAAACTCCTTGGGTCGGAGCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: MPLLLRFNFFSS*TSSNSLGRSCL Trigger: CAGACAGCTCCGACCCAAGGAGTTTGAAGATGTTCACGAACTAAAGAAGTTAAACCTAAGCAGCAATGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CAA 72 bp | CAAACATGTTGTTCTTTAACACGCGGATTTTGTTTCTaGCTAGCAGCATGTGCAGCAAATCTTGAGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: QTCCSLTRGFCF*LAACAANLEAS Trigger: ACTGGCCTCAAGATTTGCTGCACATGCTGCTAGCAAGAAACAAAATCCGCGTGTTAAAGAACAACATGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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| CDS CAA 72 bp | TCCAGGCTCTTCAGCCTTTTAAACTTAGCAAACATGTaGTTCTTTAACACGCGGATTTTGTTTCTTGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: SRLFSLLNLANM*FFNTRILFLAS Trigger: GCTAGCAAGAAACAAAATCCGCGTGTTAAAGAACAACATGTTTGCTAAGTTTAAAAGGCTGAAGAGCCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035651.6 |
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