Pregenerated sensors for LRRC14B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021579Ensembl transcript IDs: ENSMUST00000022064.5
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGGCAGTGTTGCTGCTGGTGACAAATGGTTGAGCCTGATCATCTaGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: CGSVAAGDKWLSLII*SRTDLRALEMHSLL Trigger: TAAGAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCTCAACCATTTGTCACCAGCAGCAACACTGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR TCA 90 bp | AGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGAGCAGTaGTTCGTGTGCCTTATAGATATGTTAACATTTACAAAGCTCATT | + |
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Preference number: 1 (lower is better) Translates to: RSCKGPGLSHSEEEQ*FVCLIDMLTFTKLI Trigger: AATGAGCTTTGTAAATGTTAACATATCTATAAGGCACACGAATCACTGCTCCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR TCA 90 bp | AGAAAGCAGATCAGAGTATGCCAAGAAACACTGGGCATATTTCAGTaGCTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: RKQIRVCQETLGIFQ*LDVLSHQKTIKICC Trigger: GCAGCAGATTTTTATCGTCTTTTGGTGACTGAGGACATCTAGTCACTGAAATATGCCCAGTGTTTCTTGGCATACTCTGATCTGCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR-3UTR TCA 90 bp | GATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGTACATCCTGCCCTGGTaGCCACATTCTCCACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: DLFLKGVAKGQASAILRRYILPW*PHSPPS Trigger: AGAAGGTGGAGAATGTGGTCACCAGGGCAGGATGTA...CCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAGAAACAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR CAA 90 bp | TCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTaGAGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLRKSCGSVAAGDKW*SLIIWSRTDLRALE Trigger: TTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCTCAACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGAGCAGTGATTACAAAGCTCATTCTTaGAAACTGAGTCACGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LKGVAKGQASAILRRSSDYKAHS*KLSHEF Trigger: AAACTCGTGACTCAGTTTTCAAGAATGAGCTTTGTA...ATCACTGCTCCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR-3UTR GCA 90 bp | GATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGTCTGCTTTAAGATCTTaGTGTGCTAACACACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: DLFLKGVAKGQASAILRRSALRS*CANTQE Trigger: CTCCTGTGTGTTAGCACAGCAAGATCTTAAAGCAGA...CCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAGAAACAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR-3UTR TCA 90 bp | TCACCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCAGCCTGCAGTTTTCTCTaGGGAAATCTTGTGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SPKDDKNLLQVETKPKQPACSFL*GNLVAV Trigger: CACTGCCACAAGATTTCCTCAGAGAAAACTGCAGGC...TGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR-3UTR GCA 90 bp | TCACCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCAAGGTGGCTTCTCCTCTaGTTTAAGATCTTGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SPKDDKNLLQVETKPKQPRWLLL*FKILLC Trigger: GCACAGCAAGATCTTAAAGCAGAGGAGAAGCCACCT...TGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR-3UTR CCA 90 bp | CATATTTCAGTGACTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGTCTCATTTATGTATCTaGCTTCCTCTTAGAGCACGT | + |
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Preference number: 2 (lower is better) Translates to: HISVTRCPQSPKDDKNLLSHLCI*LPLRAR Trigger: ACGTGCTCTAAGAGGAAGCCAGATACATAAATGAGA...CAGCAGATTTTTATCGTCTTTTGGTGACTGAGGACATCTAGTCACTGAAATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCCCTaGCTCCCGAGTGCTGGGATTAAAGGCGTGCGCGAC | + |
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Preference number: 3 (lower is better) Translates to: PGWPQTQKSTCP*LPSAGIKGVRD Trigger: GTCGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGGGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGTCTATTTTCTCTGAGGAAATCTaGTGGCAGTGTTGCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SRVLGLKACATTSGSVSIFSEEI*WQCCCW Trigger: CCAGCAGCAACACTGCCACAAGATTTCCTCAGAGAA...AATAGACACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR CCA 72 bp | GTTGCTGCTGGTGACAAATGGTTGAGCCTGATCATCTaGTCCAGGACTGACCTCAGGGCACTAGAAATGCAC | + |
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Preference number: 3 (lower is better) Translates to: VAAGDKWLSLII*SRTDLRALEMH Trigger: GTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCTCAACCATTTGTCACCAGCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR CCA 72 bp | AGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATaGTTGAGCCTGATCATCTGGTCCAGGACTGACCTC | + |
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Preference number: 3 (lower is better) Translates to: RKSCGSVAAGDK*LSLIIWSRTDL Trigger: GAGGTCAGTCCTGGACCAGATGATCAGGCTCAACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR TCA 72 bp | TTCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTaGCAAATGGTTGAGCCTGATCATCTGGTCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: FSEEILWQCCCW*QMVEPDHLVQD Trigger: GTCCTGGACCAGATGATCAGGCTCAACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR TCA 72 bp | TCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTaGGGAGGAGCAGTGATTCGTGTGCCTTATAGATAT | + |
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Preference number: 3 (lower is better) Translates to: SKELQRARPQPF*GGAVIRVPYRY Trigger: ATATCTATAAGGCACACGAATCACTGCTCCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR CCA 72 bp | AACACACAGGAGCACCTCATGTCTCATTTATGTATCTaGCTTCCTCTTAGAGCACGTAACGAGTACGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: NTQEHLMSHLCI*LPLRARNEYAC Trigger: GCAGGCGTACTCGTTACGTGCTCTAAGAGGAAGCCAGATACATAAATGAGACATGAGGTGCTCCTGTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| 3UTR-3UTR CAA 90 bp | TCACCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCAGCTGGTGACAAATGGTaGAGCCTGATCATCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: SPKDDKNLLQVETKPKQPAGDKW*SLIIWS Trigger: GGACCAGATGATCAGGCTCAACCATTTGTCACCAGC...TGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGGCTGGCAGCAGGTCCTaGCCAGCACCTTGGTACGGC | + |
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Preference number: 4 (lower is better) Translates to: PASRVLGLKACATTSGSVAGSRS*PAPWYG Trigger: GCCGTACCAAGGTGCTGGCCAGGACCTGCTGCCAGC...CACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR TCA 90 bp | CCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGGTGAGTGAGGTCAGCTaGGGGAAGCCCACCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PASRVLGLKACATTSGSVVSEVS*GKPTWV Trigger: GACCCAGGTGGGCTTCCCTCAGCTGACCTCACTCAC...CACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGAGCACTCTCAGTGTTTaGGCAGCCTGGCTCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PASRVLGLKACATTSGSVSTLSV*AAWLSS Trigger: GCTGCTGAGCCAGGCTGCCCAAACACTGAGAGTGCT...CACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGCATCCTGAGGGTAGATaGCACCCTCGGGGTAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PASRVLGLKACATTSGSVHPEGR*HPRGSS Trigger: ACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATG...CACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR TCA 90 bp | TCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGTCTATTCCTTGGTGGGCAAGGTaGGTGAGGTCAGCTGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SRVLGLKACATTSGSVSIPWWAR*VRSAEG Trigger: TCCCTCAGCTGACCTCACTCACCTTGCCCACCAAGG...AATAGACACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR TCA 90 bp | CTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGAGCAGTGATGGTGGGCAAGGTGAGTaGGGTCAGCTGAGGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LKGVAKGQASAILRRSSDGGQGE*GQLREA Trigger: GGCTTCCCTCAGCTGACCTCACTCACCTTGCCCACC...ATCACTGCTCCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR GCA 90 bp | CTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGAGCAGTGATCCTCCAGGCAGGCCTTaGAGGCACGATCACGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LKGVAKGQASAILRRSSDPPGRP*RHDHAG Trigger: ACCTGCGTGATCGTGCCTGCAAGGCCTGCCTGGAGG...ATCACTGCTCCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | TCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGTCTATTTTGAACTGCTGGAGCTaGCTGCAAGGGCTAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SRVLGLKACATTSGSVSILNCWS*LQGLRP Trigger: GGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAA...AATAGACACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGAAAACTTCCAAAAAGTaGGGTGGAGACCTGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: PASRVLGLKACATTSGSVKTSKK*GGDLDV Trigger: GACATCCAGGTCTCCACCCCACTTTTTGGAAGTTTT...CACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR TCA 90 bp | AGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCCCAGGTTGTGTCCACTaGGGTCCAGCACCTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLIIWSRTDLRALEMHSLPGCVH*GPAPPS Trigger: ACTTGGAGGTGCTGGACCTCAGTGGACACAACCTGG...GAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GGCCTCAAACTCAGAAATCCACCTGCCCCTGCCTCCCGAGTGCTGGGATTAAAGTGGACCAGCTGGGAGTaGGACACTAACGCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GLKLRNPPAPASRVLGLKWTSWE*DTNASA Trigger: TGCTGAAGCGTTAGTGTCCCACTCCCAGCTGGTCCA...CTTTAATCCCAGCACTCGGGAGGCAGGGGCAGGTGGATTTCTGAGTTTGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GGCCTCAAACTCAGAAATCCACCTGCCCCTGCCTCCCGAGTGCTGGGATTAAAGTTCTCCTGGACCAGCTaGGAGTGGGACACTAACGCT | + |
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Preference number: 4 (lower is better) Translates to: GLKLRNPPAPASRVLGLKFSWTS*EWDTNA Trigger: AGCGTTAGTGTCCCACTCCCAGCTGGTCCAGGAGAA...CTTTAATCCCAGCACTCGGGAGGCAGGGGCAGGTGGATTTCTGAGTTTGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR TCA 90 bp | GATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGTCCTCCAGTGGCCAGTaGCTCAGCAGAGCACGGGTT | + |
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Preference number: 4 (lower is better) Translates to: DLFLKGVAKGQASAILRRSSSGQ*LSRARV Trigger: AACCCGTGCTCTGCTGAGTCACTGGCCACTGGAGGA...CCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAGAAACAAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GGTGACCACATTCTCCACCTTCTGTCTTGGTGTAAGGTGGCTTCTCCTCTGCTTGAACAGGGCTGTCCTTaGAGCTGGCAGCAGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GDHILHLLSWCKVASPLLEQGCP*SWQQVL Trigger: CAGGACCTGCTGCCAGCTCCAAGGACAGCCCTGTTC...AAGCAGAGGAGAAGCCACCTTACACCAAGACAGAAGGTGGAGAATGTGGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCCTTTCTAAGGTTGCCTaGCCCAGCCAGGCCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SLIIWSRTDLRALEMHSLLSKVA*PSQAKN Trigger: GTTCTTGGCCTGGCTGGGCCAGGCAACCTTAGAAAG...GAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCATCTGGGGCACAAGTTaGGGGAGCATCGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SLIIWSRTDLRALEMHSLIWGTS*GSIEGL Trigger: AAGGCCTTCGATGCTCCCCCAACTTGTGCCCCAGAT...GAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCCAGCAAAGACTTCAATaGGGTGCCCAGCTGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: SLIIWSRTDLRALEMHSLQQRLQ*GAQLNR Trigger: CCTGTTCAGCTGGGCACCCCATTGAAGTCTTTGCTG...GAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCTCCAGCACCTCCAAGTaGGCAGTGTGGTTACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLIIWSRTDLRALEMHSLSSTSK*AVWLQS Trigger: AGACTGTAACCACACTGCCCACTTGGAGGTGCTGGA...GAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR GCA 90 bp | ATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCTTACAGGCACATGGTCAGCTATaGCCTGCATACAGGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IIWSRTDLRALEMHSLLQAHGQL*PAYRPP Trigger: TGGAGGCCTGTATGCAGGGCATAGCTGACCATGTGC...CTGTAAGAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GGCCTCAAACTCAGAAATCCACCTGCCCCTGCCTCCCGAGTGCTGGGATTAAAGGGCCTTGAACAGAAGTaGGTAGAGGTTGTAGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: GLKLRNPPAPASRVLGLKGLEQK*VEVVGY Trigger: ATAGCCTACAACCTCTACCCACTTCTGTTCAAGGCC...CTTTAATCCCAGCACTCGGGAGGCAGGGGCAGGTGGATTTCTGAGTTTGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | ATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCTTACAGGTGAGCTGGTTCATCTaGCTGAGCTCCCAGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: IIWSRTDLRALEMHSLLQVSWFI*LSSQAI Trigger: TATTGCCTGGGAGCTCAGCCAGATGAACCAGCTCAC...CTGTAAGAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGCTTAGCTCAGTGAGCTaGTTCATCTGGCTGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DLFLKGVAKGQASAILRRLSSVS*FIWLSS Trigger: GGAGCTCAGCCAGATGAACCAGCTCACTGAGCTAAG...CCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAGAAACAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGAGCAGTGATGGGGTAGCAGTCCTTTaGTACTGGGAACTCAATATG | + |
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Preference number: 4 (lower is better) Translates to: LKGVAKGQASAILRRSSDGVAVL*YWELNM Trigger: CATATTGAGTTCCCAGTACCAAAGGACTGCTACCCC...ATCACTGCTCCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCACCGAGTGGGGTGGAGACCTaGATGTCCTCCCGGTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: PKDDKNLLQVETKPKQPPSGVET*MSSRLA Trigger: AGCTAACCGGGAGGACATCCAGGTCTCCACCCCACT...CGGTGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGTTCCAAAAAGTGGGGTaGAGACCTGGATGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: DLFLKGVAKGQASAILRRFQKVG*RPGCPP Trigger: GGGAGGACATCCAGGTCTCCACCCCACTTTTTGGAA...CCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAGAAACAAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR TCA 90 bp | TCACCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCAAATGGGGTGCCCAGCTaGACAGGGCTGTCCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SPKDDKNLLQVETKPKQPNGVPS*TGLSLE Trigger: CTCCAAGGACAGCCCTGTTCAGCTGGGCACCCCATT...TGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR GCA 90 bp | ATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCTTACAGAATGGCTTCAGGGCCTaGACCACCATGTCAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: IIWSRTDLRALEMHSLLQNGFRA*TTMSKL Trigger: CAACTTTGACATGGTGGTGCAGGCCCTGAAGCCATT...CTGTAAGAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | TCACCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCACCGGAACTCCTCCAGTaGCCAGTGACTCAGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPKDDKNLLQVETKPKQPPELLQ*PVTQQS Trigger: GCTCTGCTGAGTCACTGGCCACTGGAGGAGTTCCGG...TGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GCTTTAAGATCTTGCTGTGCTAACACACAGGAGCACCTCATGTCTCATTTATGTCTCGCCCTCTGGATCTaGGGCACAAGTTGGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ALRSCCANTQEHLMSHLCLALWI*GTSWGS Trigger: GCTCCCCCAACTTGTGCCCCAGATCCAGAGGGCGAG...ACATAAATGAGACATGAGGTGCTCCTGTGTGTTAGCACAGCAAGATCTTAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GGTGACCACATTCTCCACCTTCTGTCTTGGTGTAAGGTGGCTTCTCCTCTGCTTAGAAACTTGAACTGCTaGAGCTGGCTGCAAGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: GDHILHLLSWCKVASPLLRNLNC*SWLQGL Trigger: TAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCT...AAGCAGAGGAGAAGCCACCTTACACCAAGACAGAAGGTGGAGAATGTGGTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR TCA 90 bp | GCTTTAAGATCTTGCTGTGCTAACACACAGGAGCACCTCATGTCTCATTTATGTCCGGAGAGCACTGCCTaGGAGCGGGTTTCCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: ALRSCCANTQEHLMSHLCPESTA*ERVSKK Trigger: TTTCTTGGAAACCCGCTCTCAGGCAGTGCTCTCCGG...ACATAAATGAGACATGAGGTGCTCCTGTGTGTTAGCACAGCAAGATCTTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR GCA 90 bp | CATATTTCAGTGACTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGTGGGTCAGCAGCTGCTaGACATGGCCAGCATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HISVTRCPQSPKDDKNLLWVSSC*TWPACS Trigger: GCTGCATGCTGGCCATGTGCAGCAGCTGCTGACCCA...CAGCAGATTTTTATCGTCTTTTGGTGACTGAGGACATCTAGTCACTGAAATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GCTTTAAGATCTTGCTGTGCTAACACACAGGAGCACCTCATGTCTCATTTATGTCGCAGGTCTTCAGGGTaGTCAGTGTTTGGCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ALRSCCANTQEHLMSHLCRRSSG*SVFGLS Trigger: ACTGAGGCCAAACACTGACCACCCTGAAGACCTGCG...ACATAAATGAGACATGAGGTGCTCCTGTGTGTTAGCACAGCAAGATCTTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CATATTTCAGTGACTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGTCCTGGCCAGCACCTTaGTACGGCCCCACCTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: HISVTRCPQSPKDDKNLLSWPAP*YGPTFL Trigger: TAGGAAGGTGGGGCCGTACCAAGGTGCTGGCCAGGA...CAGCAGATTTTTATCGTCTTTTGGTGACTGAGGACATCTAGTCACTGAAATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCACCGTCCAAGTGGGCAGTGTaGTTACAGTCTGCTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PKDDKNLLQVETKPKQPPSKWAV*LQSAKK Trigger: CTTCTTAGCAGACTGTAACCACACTGCCCACTTGGA...CGGTGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GGTGACCACATTCTCCACCTTCTGTCTTGGTGTAAGGTGGCTTCTCCTCTGCTTACGTCGTATTTCTGTTaGTCGAATTTGGACACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GDHILHLLSWCKVASPLLTSYFC*SNLDTD Trigger: GTCAGTGTCCAAATTCGACCAACAGAAATACGACGT...AAGCAGAGGAGAAGCCACCTTACACCAAGACAGAAGGTGGAGAATGTGGTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR TCA 90 bp | GCTTTAAGATCTTGCTGTGCTAACACACAGGAGCACCTCATGTCTCATTTATGTGCAGGTAACTGGCCTTaGACAGAAGTGGGTAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: ALRSCCANTQEHLMSHLCAGNWP*TEVGRG Trigger: ACCTCTACCCACTTCTGTTCAAGGCCAGTTACCTGC...ACATAAATGAGACATGAGGTGCTCCTGTGTGTTAGCACAGCAAGATCTTAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | ATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCTTACAGATCATCATGTTAACATaGCTGTCTGTGATGTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: IIWSRTDLRALEMHSLLQIIMLT*LSVMLH Trigger: GTGCAACATCACAGACAGCCATGTTAACATGATGAT...CTGTAAGAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR GCA 90 bp | GGTGACCACATTCTCCACCTTCTGTCTTGGTGTAAGGTGGCTTCTCCTCTGCTTAAGTACCAAGTTCATTaGTGGTTTCATGAATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GDHILHLLSWCKVASPLLKYQVH*WFHECL Trigger: CAGACATTCATGAAACCAGCAATGAACTTGGTACTT...AAGCAGAGGAGAAGCCACCTTACACCAAGACAGAAGGTGGAGAATGTGGTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGTTTGTTCTAGTGCTCTaGAAAAGTTTTCCAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DLFLKGVAKGQASAILRRFVLVL*KSFPKQ Trigger: CTGCTTTGGAAAACTTTTCCAGAGCACTAGAACAAA...CCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAGAAACAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | GCTTTAAGATCTTGCTGTGCTAACACACAGGAGCACCTCATGTCTCATTTATGTGGGCTAAGCAATGTTTaGATCTTCCCAGTGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALRSCCANTQEHLMSHLCGLSNV*IFPVSV Trigger: TACACTCACTGGGAAGATCCAAACATTGCTTAGCCC...ACATAAATGAGACATGAGGTGCTCCTGTGTGTTAGCACAGCAAGATCTTAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CCA 90 bp | CCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCACCGTACCAAGTTCATTGCTaGTTTCATGAATGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKDDKNLLQVETKPKQPPYQVHC*FHECLD Trigger: ATCCAGACATTCATGAAACCAGCAATGAACTTGGTA...CGGTGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS TCA 90 bp | GGGGGAGCATCGAAGGCCTTGGTGGGCAAGGTGAGTGAGGTCAGCTaGGGGAAGCCCACCTGGGTCAGCAGCTGCTGCACATGGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GGASKALVGKVSEVS*GKPTWVSSCCTWPA Trigger: TGCTGGCCATGTGCAGCAGCTGCTGACCCAGGTGGGCTTCCCTCAGCTGACCTCACTCACCTTGCCCACCAAGGCCTTCGATGCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | GCCTCCAGGCAGGCCTTGCAGGCACGATCACGCAGGTCTTCAGGGTaGTCAGTGTTTGGCCTCAGTAGCACAGCCAGCCGGAACTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ASRQALQARSRRSSG*SVFGLSSTASRNSS Trigger: GGAGGAGTTCCGGCTGGCTGTGCTACTGAGGCCAAACACTGACCACCCTGAAGACCTGCGTGATCGTGCCTGCAAGGCCTGCCTGGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCGACCACGTCCGGCTCAGTGCCTCCCACAAGGACATaGCTGCACCTGTACGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PASRVLGLKACATTSGSVPPTRT*LHLYVL Trigger: CAGGACGTACAGGTGCAGCAATGTCCTTGTGGGAGG...CACTGAGCCGGACGTGGTCGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | AAGACTTCAATGGGGTGCCCAGCTGAACAGGGCTGTCCTTGGAGCTaGCAGCAGGTCCTGGCCAGCACCTTGGTACGGCCCCACCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTSMGCPAEQGCPWS*QQVLASTLVRPHLP Trigger: AGGAAGGTGGGGCCGTACCAAGGTGCTGGCCAGGACCTGCTGCCAGCTCCAAGGACAGCCCTGTTCAGCTGGGCACCCCATTGAAGTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 90 bp | GCACATGGTCAGCTATGCCCTGCATACAGGCCTCCAGGCAGGCCTTaGAGGCACGATCACGCAGGTCTTCAGGGTGGTCAGTGTTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: AHGQLCPAYRPPGRP*RHDHAGLQGGQCLA Trigger: GGCCAAACACTGACCACCCTGAAGACCTGCGTGATCGTGCCTGCAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACCATGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 90 bp | CGAAGGCGGTTGCTCCCACTTTTCAGCACATGGTCAGCTATGCCCTaGATACAGGCCTCCAGGCAGGCCTTGCAGGCACGATCACGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RRRLLPLFSTWSAMP*IQASRQALQARSRR Trigger: CCTGCGTGATCGTGCCTGCAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACCATGTGCTGAAAAGTGGGAGCAACCGCCTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 90 bp | TTTCTAAGGTTGCCTGGCCCAGCCAGGCCAAGAACTTGTAGGAGCTaGCCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGGCAACAGACC | + |
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Preference number: 5 (lower is better) Translates to: FLRLPGPARPRTCRS*PGLRLSARSEGQQT Trigger: GGTCTGTTGCCCTTCACTCCGGGCAGACAGCCTGAGCCCTGGGCAGCTCCTACAAGTTCTTGGCCTGGCTGGGCCAGGCAACCTTAGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 90 bp | CTACCCGAAGGCGGTTGCTCCCACTTTTCAGCACATGGTCAGCTATaGCCTGCATACAGGCCTCCAGGCAGGCCTTGCAGGCACGATCAC | + |
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Preference number: 5 (lower is better) Translates to: LPEGGCSHFSAHGQL*PAYRPPGRPCRHDH Trigger: GTGATCGTGCCTGCAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACCATGTGCTGAAAAGTGGGAGCAACCGCCTTCGGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | GCTGAGCTCCCAGGCAATAGAGGTAAGGAGAAGATCCTCGCCCTCTaGATCTGGGGCACAAGTTGGGGGAGCATCGAAGGCCTTGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: AELPGNRGKEKILAL*IWGTSWGSIEGLGG Trigger: CCCACCAAGGCCTTCGATGCTCCCCCAACTTGTGCCCCAGATCCAGAGGGCGAGGATCTTCTCCTTACCTCTATTGCCTGGGAGCTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 90 bp | TTGGTACGGCCCCACCTTCCTAGTGCCCTCCCACAAGGACATTGCTaGACCTGTACGTCCTGGATGCCGGTGAAATCAGCTACCCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LVRPHLPSALPQGHC*TCTSWMPVKSATRR Trigger: CCTTCGGGTAGCTGATTTCACCGGCATCCAGGACGTACAGGTGCAGCAATGTCCTTGTGGGAGGGCACTAGGAAGGTGGGGCCGTACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 90 bp | ACCTTGGTACGGCCCCACCTTCCTAGTGCCCTCCCACAAGGACATTaGTGCACCTGTACGTCCTGGATGCCGGTGAAATCAGCTACCCGA | + |
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Preference number: 5 (lower is better) Translates to: TLVRPHLPSALPQGH*CTCTSWMPVKSATR Trigger: TCGGGTAGCTGATTTCACCGGCATCCAGGACGTACAGGTGCAGCAATGTCCTTGTGGGAGGGCACTAGGAAGGTGGGGCCGTACCAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | CTCCCAGGCAATAGAGGTAAGGAGAAGATCCTCGCCCTCTGGATCTaGGGCACAAGTTGGGGGAGCATCGAAGGCCTTGGTGGGCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LPGNRGKEKILALWI*GTSWGSIEGLGGQG Trigger: ACCTTGCCCACCAAGGCCTTCGATGCTCCCCCAACTTGTGCCCCAGATCCAGAGGGCGAGGATCTTCTCCTTACCTCTATTGCCTGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS TCA 90 bp | AGGGAGTTCGCAGAGTGCAGCAAAAAGGCGCCGGAGAGCACTGCCTaGGAGCGGGTTTCCAAGAAACTTGAACTGCTGGAGCTGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: REFAECSKKAPESTA*ERVSKKLELLELAA Trigger: TGCAGCCAGCTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTCAGGCAGTGCTCTCCGGCGCCTTTTTGCTGCACTCTGCGAACTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | GTGAAATCAGCTACCCGAAGGCGGTTGCTCCCACTTTTCAGCACATaGTCAGCTATGCCCTGCATACAGGCCTCCAGGCAGGCCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: VKSATRRRLLPLFST*SAMPCIQASRQALQ Trigger: CTGCAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACCATGTGCTGAAAAGTGGGAGCAACCGCCTTCGGGTAGCTGATTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | CTGTCTGTGATGTTGCACTCCTCGAGGGTGAGCACTCTCAGTGTTTaGGCAGCCTGGCTCAGCAGCCTGAAGAAGGTAGAAGGGTACAGG | + |
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Preference number: 5 (lower is better) Translates to: LSVMLHSSRVSTLSV*AAWLSSLKKVEGYR Trigger: CCTGTACCCTTCTACCTTCTTCAGGCTGCTGAGCCAGGCTGCCCAAACACTGAGAGTGCTCACCCTCGAGGAGTGCAACATCACAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | ATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACTaGGAACTCAATATGGCGAAGCCTAGGGAGTTCGCAGAGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ILRVDGTLGVAVLWY*ELNMAKPREFAECS Trigger: GCTGCACTCTGCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | CAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTaGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: QFILRVDGTLGVAVL*YWELNMAKPREFAE Trigger: CTCTGCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | CTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGAGCAGTGATTACAGGTGTACCAGGTaGTGTCCACTGAGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LKGVAKGQASAILRRSSDYRCTR*CPLRSS Trigger: GCTGGACCTCAGTGGACACAACCTGGTACACCTGTA...ATCACTGCTCCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | GATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGGAGCACTCTCAGTGTTaGGGCAGCCTGGCTCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: DLFLKGVAKGQASAILRREHSQC*GSLAQQ Trigger: CTGCTGAGCCAGGCTGCCCAAACACTGAGAGTGCTC...CCTCCTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTGAGAAACAAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 90 bp | TGGGGTGGAGACCTGGATGTCCTCCCGGTTAGCTCGAAGCAGTACTaGTCGAAGATCCTCTGCAATCACGTCGTATTTCTGTTGGTCGAA | + |
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Preference number: 5 (lower is better) Translates to: WGGDLDVLPVSSKQY*SKILCNHVVFLLVE Trigger: TTCGACCAACAGAAATACGACGTGATTGCAGAGGATCTTCGAGCAGTACTGCTTCGAGCTAACCGGGAGGACATCCAGGTCTCCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | GTGAGTGTAGAGAAAGCCACACTTAGCTCAGTGAGCTGGTTCATCTaGCTGAGCTCCCAGGCAATAGAGGTAAGGAGAAGATCCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: VSVEKATLSSVSWFI*LSSQAIEVRRRSSP Trigger: GGGCGAGGATCTTCTCCTTACCTCTATTGCCTGGGAGCTCAGCCAGATGAACCAGCTCACTGAGCTAAGTGTGGCTTTCTCTACACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | GCACTGCCTGAGAGCGGGTTTCCAAGAAACTTGAACTGCTGGAGCTaGCTGCAAGGGCTAAGGCCCAGAATCATCATGTTAACATGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ALPESGFPRNLNCWS*LQGLRPRIIMLTWL Trigger: CAGCCATGTTAACATGATGATTCTGGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTCAGGCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | AGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCTCGCATGCAGCCGGACATaGTGTACTACCTCCAACTTT | + |
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Preference number: 5 (lower is better) Translates to: SLIIWSRTDLRALEMHSLACSRT*CTTSNF Trigger: AAAGTTGGAGGTAGTACACAATGTCCGGCTGCATGC...GAGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | CCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCACCGTGGCTGTCTGTGATGTaGCACTCCTCGAGGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKDDKNLLQVETKPKQPPWLSVM*HSSRVS Trigger: GCTCACCCTCGAGGAGTGCAACATCACAGACAGCCA...CGGTGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS TCA 90 bp | GCAGAGCACGGGTTACATCTGCCTGCTCTAGCAGGTAACTGGCCTTaGACAGAAGTGGGTAGAGGTTGTAGGCTATATTGTCCAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AEHGLHLPALAGNWP*TEVGRGCRLYCPGS Trigger: AGAACCTGGACAATATAGCCTACAACCTCTACCCACTTCTGTTCAAGGCCAGTTACCTGCTAGAGCAGGCAGATGTAACCCGTGCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS TCA 90 bp | ATCCTCTGCAATCACGTCGTATTTCTGTTGGTCGAATTTGGACACTaGCAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILCNHVVFLLVEFGH*QFILRVDGTLGVAV Trigger: GACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCGACCAACAGAAATACGACGTGATTGCAGAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | CTCGAAGATCCTCTGCAATCACGTCGTATTTCTGTTGGTCGAATTTaGACACTGACAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LEDPLQSRRISVGRI*TLTVHPEGRWHPRG Trigger: ACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCGACCAACAGAAATACGACGTGATTGCAGAGGATCTTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | CATATTTCAGTGACTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGGCCTCCAGGCAGGCCTaGCAGGCACGATCACGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HISVTRCPQSPKDDKNLLASRQA*QARSRR Trigger: CCTGCGTGATCGTGCCTGCAAGGCCTGCCTGGAGGC...CAGCAGATTTTTATCGTCTTTTGGTGACTGAGGACATCTAGTCACTGAAATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | ATCTTCCCAGTGAGTGTAGAGAAAGCCACACTTAGCTCAGTGAGCTaGTTCATCTGGCTGAGCTCCCAGGCAATAGAGGTAAGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IFPVSVEKATLSSVS*FIWLSSQAIEVRRR Trigger: TCTTCTCCTTACCTCTATTGCCTGGGAGCTCAGCCAGATGAACCAGCTCACTGAGCTAAGTGTGGCTTTCTCTACACTCACTGGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | TCTGTTGGTCGAATTTGGACACTGACAGTTCATCCTGAGGGTAGATaGCACCCTCGGGGTAGCAGTCCTTTGGTACTGGGAACTCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SVGRIWTLTVHPEGR*HPRGSSPLVLGTQY Trigger: ATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCGACCAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | TCACCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCCCAAACAGCCATCCAACTTTCTAAGGTaGCCTGGCCCAGCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPKDDKNLLQVETKPKQPSNFLR*PGPARP Trigger: TGGCCTGGCTGGGCCAGGCAACCTTAGAAAGTTGGA...TGGCTGTTTGGGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | AGGTCCAACACTCTTAGTGGGGTCTTCAAGGGGCTAAGCAATGTTTaGATCTTCCCAGTGAGTGTAGAGAAAGCCACACTTAGCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSNTLSGVFKGLSNV*IFPVSVEKATLSSV Trigger: CACTGAGCTAAGTGTGGCTTTCTCTACACTCACTGGGAAGATCCAAACATTGCTTAGCCCCTTGAAGACCCCACTAAGAGTGTTGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS TCA 90 bp | AAGTGGGCAGTGTGGTTACAGTCTGCTAAGAAGGATATGTCTTCATaGTTAAGGGCACAGTTGGCTAGGTCCAACACTCTTAGTGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: KWAVWLQSAKKDMSS*LRAQLARSNTLSGV Trigger: GACCCCACTAAGAGTGTTGGACCTAGCCAACTGTGCCCTTAATCATGAAGACATATCCTTCTTAGCAGACTGTAACCACACTGCCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 90 bp | TTCATTGCTGGTTTCATGAATGTCTGGATCAAAACTTCCAAAAAGTaGGGTGGAGACCTGGATGTCCTCCCGGTTAGCTCGAAGCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: FIAGFMNVWIKTSKK*GGDLDVLPVSSKQY Trigger: GTACTGCTTCGAGCTAACCGGGAGGACATCCAGGTCTCCACCCCACTTTTTGGAAGTTTTGATCCAGACATTCATGAAACCAGCAATGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | CATATTTCAGTGACTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGGGGGCTAAGCAATGTTaGGATCTTCCCAGTGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: HISVTRCPQSPKDDKNLLGAKQC*DLPSEC Trigger: ACACTCACTGGGAAGATCCAAACATTGCTTAGCCCC...CAGCAGATTTTTATCGTCTTTTGGTGACTGAGGACATCTAGTCACTGAAATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS-3UTR CAA 90 bp | CATATTTCAGTGACTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGCGGGGTAGCAGTCCTTaGGTACTGGGAACTCAATAT | + |
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Preference number: 5 (lower is better) Translates to: HISVTRCPQSPKDDKNLLRGSSP*VLGTQY Trigger: ATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCG...CAGCAGATTTTTATCGTCTTTTGGTGACTGAGGACATCTAGTCACTGAAATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | TTGCCTGGCCCAGCCAGGCCAAGAACTTGTAGGAGCTaGCCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LPGPARPRTCRS*PGLRLSARSEG Trigger: CCCTTCACTCCGGGCAGACAGCCTGAGCCCTGGGCAGCTCCTACAAGTTCTTGGCCTGGCTGGGCCAGGCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | GTCCTTGGAGCTGGCAGCAGGTCCTGGCCAGCACCTTaGTACGGCCCCACCTTCCTAGTGCCCTCCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: VLGAGSRSWPAP*YGPTFLVPSHK Trigger: CTTGTGGGAGGGCACTAGGAAGGTGGGGCCGTACCAAGGTGCTGGCCAGGACCTGCTGCCAGCTCCAAGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | CAGGCCTTGCAGGCACGATCACGCAGGTCTTCAGGGTaGTCAGTGTTTGGCCTCAGTAGCACAGCCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: QALQARSRRSSG*SVFGLSSTASR Trigger: CCGGCTGGCTGTGCTACTGAGGCCAAACACTGACCACCCTGAAGACCTGCGTGATCGTGCCTGCAAGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 90 bp | AGGCCTTGCAGGCACGATCACGCAGGTCTTCAGGGTGGTCAGTGTTaGGCCTCAGTAGCACAGCCAGCCGGAACTCCTCCAGTGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RPCRHDHAGLQGGQC*ASVAQPAGTPPVAS Trigger: ACTGGCCACTGGAGGAGTTCCGGCTGGCTGTGCTACTGAGGCCAAACACTGACCACCCTGAAGACCTGCGTGATCGTGCCTGCAAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | GGCGGTTGCTCCCACTTTTCAGCACATGGTCAGCTATaGCCTGCATACAGGCCTCCAGGCAGGCCTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GGCSHFSAHGQL*PAYRPPGRPCR Trigger: CCTGCAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACCATGTGCTGAAAAGTGGGAGCAACCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | GAGAAGATCCTCGCCCTCTGGATCTGGGGCACAAGTTaGGGGAGCATCGAAGGCCTTGGTGGGCAAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: EKILALWIWGTS*GSIEGLGGQGE Trigger: CTCACCTTGCCCACCAAGGCCTTCGATGCTCCCCCAACTTGTGCCCCAGATCCAGAGGGCGAGGATCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 90 bp | AGCACATGGTCAGCTATGCCCTGCATACAGGCCTCCAGGCAGGCCTaGCAGGCACGATCACGCAGGTCTTCAGGGTGGTCAGTGTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: STWSAMPCIQASRQA*QARSRRSSGWSVFG Trigger: GCCAAACACTGACCACCCTGAAGACCTGCGTGATCGTGCCTGCAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACCATGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | CGGCCCCACCTTCCTAGTGCCCTCCCACAAGGACATTaGTGCACCTGTACGTCCTGGATGCCGGTGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: RPHLPSALPQGH*CTCTSWMPVKS Trigger: TGATTTCACCGGCATCCAGGACGTACAGGTGCAGCAATGTCCTTGTGGGAGGGCACTAGGAAGGTGGGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 72 bp | CGGAGAGCACTGCCTGAGAGCGGGTTTCCAAGAAACTaGAACTGCTGGAGCTGGCTGCAAGGGCTAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRALPESGFPRN*NCWSWLQGLRP Trigger: GGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTCAGGCAGTGCTCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 90 bp | CCAGCATGCAGCCGGACATTGTGTACTACCTCCAACTTTCTAAGGTaGCCTGGCCCAGCCAGGCCAAGAACTTGTAGGAGCTGCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PACSRTLCTTSNFLR*PGPARPRTCRSCPG Trigger: CCCTGGGCAGCTCCTACAAGTTCTTGGCCTGGCTGGGCCAGGCAACCTTAGAAAGTTGGAGGTAGTACACAATGTCCGGCTGCATGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | TTGCTCCCACTTTTCAGCACATGGTCAGCTATGCCCTaGATACAGGCCTCCAGGCAGGCCTTGCAGGCACGA | + |
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Preference number: 6 (lower is better) Translates to: LLPLFSTWSAMP*IQASRQALQAR Trigger: TCGTGCCTGCAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACCATGTGCTGAAAAGTGGGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | CCCCACCTTCCTAGTGCCCTCCCACAAGGACATTGCTaGACCTGTACGTCCTGGATGCCGGTGAAATCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PHLPSALPQGHC*TCTSWMPVKSA Trigger: AGCTGATTTCACCGGCATCCAGGACGTACAGGTGCAGCAATGTCCTTGTGGGAGGGCACTAGGAAGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | CCAGGCAATAGAGGTAAGGAGAAGATCCTCGCCCTCTaGATCTGGGGCACAAGTTGGGGGAGCATCGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PGNRGKEKILAL*IWGTSWGSIEG Trigger: GCCTTCGATGCTCCCCCAACTTGTGCCCCAGATCCAGAGGGCGAGGATCTTCTCCTTACCTCTATTGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 90 bp | GCTGTCTGTGATGTTGCACTCCTCGAGGGTGAGCACTCTCAGTGTTaGGGCAGCCTGGCTCAGCAGCCTGAAGAAGGTAGAAGGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: AVCDVALLEGEHSQC*GSLAQQPEEGRRVQ Trigger: CTGTACCCTTCTACCTTCTTCAGGCTGCTGAGCCAGGCTGCCCAAACACTGAGAGTGCTCACCCTCGAGGAGTGCAACATCACAGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 90 bp | AAAAGGCGCCGGAGAGCACTGCCTGAGAGCGGGTTTCCAAGAAACTaGAACTGCTGGAGCTGGCTGCAAGGGCTAAGGCCCAGAATCATC | + |
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Preference number: 6 (lower is better) Translates to: KRRRRALPESGFPRN*NCWSWLQGLRPRII Trigger: GATGATTCTGGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTCAGGCAGTGCTCTCCGGCGCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS TCA 72 bp | GCAGAGTGCAGCAAAAAGGCGCCGGAGAGCACTGCCTaGGAGCGGGTTTCCAAGAAACTTGAACTGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: AECSKKAPESTA*ERVSKKLELLE Trigger: CTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTCAGGCAGTGCTCTCCGGCGCCTTTTTGCTGCACTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | CCCACCTGGGTCAGCAGCTGCTGCACATGGCCAGCATaGAGCCGGACATTGTGTACTACCTCCAACTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: PTWVSSCCTWPA*SRTLCTTSNFL Trigger: TAGAAAGTTGGAGGTAGTACACAATGTCCGGCTGCATGCTGGCCATGTGCAGCAGCTGCTGACCCAGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | GCACTGCCTGAGAGCGGGTTTCCAAGAAACTTGAACTaGTGGAGCTGGCTGCAAGGGCTAAGGCCCAGAATC | + |
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Preference number: 6 (lower is better) Translates to: ALPESGFPRNLN*WSWLQGLRPRI Trigger: GATTCTGGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTCAGGCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | CTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTaGTACTGGGAACTCAATATGGCGAAGCCTAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRVDGTLGVAVL*YWELNMAKPRE Trigger: CTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 72 bp | TCCTGGATGCCGGTGAAATCAGCTACCCGAAGGCGGTaGCTCCCACTTTTCAGCACATGGTCAGCTATGCCC | + |
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Preference number: 6 (lower is better) Translates to: SWMPVKSATRRR*LPLFSTWSAMP Trigger: GGGCATAGCTGACCATGTGCTGAAAAGTGGGAGCAACCGCCTTCGGGTAGCTGATTTCACCGGCATCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 72 bp | GATGTTGCACTCCTCGAGGGTGAGCACTCTCAGTGTTaGGGCAGCCTGGCTCAGCAGCCTGAAGAAGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: DVALLEGEHSQC*GSLAQQPEEGR Trigger: TCTACCTTCTTCAGGCTGCTGAGCCAGGCTGCCCAAACACTGAGAGTGCTCACCCTCGAGGAGTGCAACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | TCTGTGACAAAGAGGTCAGCAAAGACTTCAATGGGGTaGCCAGCTGAACAGGGCTGTCCTTGGAGCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SVTKRSAKTSMG*PAEQGCPWSWQ Trigger: CTGCCAGCTCCAAGGACAGCCCTGTTCAGCTGGGCACCCCATTGAAGTCTTTGCTGACCTCTTTGTCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | CTGCCTGAGAGCGGGTTTCCAAGAAACTTGAACTGCTaGAGCTGGCTGCAAGGGCTAAGGCCCAGAATCATC | + |
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Preference number: 6 (lower is better) Translates to: LPESGFPRNLNC*SWLQGLRPRII Trigger: GATGATTCTGGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTCAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | GTAGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACTaGGAACTCAATATGGCGAAGCCTAGGGAGTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: VDGTLGVAVLWY*ELNMAKPREFA Trigger: TGCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 72 bp | AGCCTGAAGAAGGTAGAAGGGTACAGGTGTACCAGGTaGTGTCCACTGAGGTCCAGCACCTCCAAGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SLKKVEGYRCTR*CPLRSSTSKWA Trigger: TGCCCACTTGGAGGTGCTGGACCTCAGTGGACACAACCTGGTACACCTGTACCCTTCTACCTTCTTCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 90 bp | GGTGCTGGGCCTAATGGCTTCAGGGCCTGCACCACCATGTCAAAGTaGCCTTCTGTGACAAAGAGGTCAGCAAAGACTTCAATGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GAGPNGFRACTTMSK*PSVTKRSAKTSMGC Trigger: GCACCCCATTGAAGTCTTTGCTGACCTCTTTGTCACAGAAGGCAACTTTGACATGGTGGTGCAGGCCCTGAAGCCATTAGGCCCAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | CGAATTTGGACACTGACAGTTCATCCTGAGGGTAGATaGCACCCTCGGGGTAGCAGTCCTTTGGTACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RIWTLTVHPEGR*HPRGSSPLVLG Trigger: TCCCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | GACCTGGATGTCCTCCCGGTTAGCTCGAAGCAGTACTaGTCGAAGATCCTCTGCAATCACGTCGTATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: DLDVLPVSSKQY*SKILCNHVVFL Trigger: CAGAAATACGACGTGATTGCAGAGGATCTTCGAGCAGTACTGCTTCGAGCTAACCGGGAGGACATCCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | CTGCAAGGGCTAAGGCCCAGAATCATCATGTTAACATaGCTGTCTGTGATGTTGCACTCCTCGAGGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LQGLRPRIIMLT*LSVMLHSSRVS Trigger: GCTCACCCTCGAGGAGTGCAACATCACAGACAGCCATGTTAACATGATGATTCTGGGCCTTAGCCCTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | GCTATATTGTCCAGGTTCTCCTGGACCAGCTGGGAGTaGGACACTAACGCTTCAGCAGAAATGAAACGAAGC | + |
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Preference number: 6 (lower is better) Translates to: AILSRFSWTSWE*DTNASAEMKRS Trigger: GCTTCGTTTCATTTCTGCTGAAGCGTTAGTGTCCCACTCCCAGCTGGTCCAGGAGAACCTGGACAATATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | GTGAGTGTAGAGAAAGCCACACTTAGCTCAGTGAGCTaGTTCATCTGGCTGAGCTCCCAGGCAATAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: VSVEKATLSSVS*FIWLSSQAIEV Trigger: TACCTCTATTGCCTGGGAGCTCAGCCAGATGAACCAGCTCACTGAGCTAAGTGTGGCTTTCTCTACACTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | GAGAGCGGGTTTCCAAGAAACTTGAACTGCTGGAGCTaGCTGCAAGGGCTAAGGCCCAGAATCATCATGTTA | + |
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Preference number: 6 (lower is better) Translates to: ESGFPRNLNCWS*LQGLRPRIIML Trigger: TAACATGATGATTCTGGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS TCA 72 bp | AATCACGTCGTATTTCTGTTGGTCGAATTTGGACACTaGCAGTTCATCCTGAGGGTAGATGGCACCCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: NHVVFLLVEFGH*QFILRVDGTLG Trigger: CCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCGACCAACAGAAATACGACGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | GGTTTCATGAATGTCTGGATCAAAACTTCCAAAAAGTaGGGTGGAGACCTGGATGTCCTCCCGGTTAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: GFMNVWIKTSKK*GGDLDVLPVSS Trigger: CGAGCTAACCGGGAGGACATCCAGGTCTCCACCCCACTTTTTGGAAGTTTTGATCCAGACATTCATGAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CAA 72 bp | CCTAATGGCTTCAGGGCCTGCACCACCATGTCAAAGTaGCCTTCTGTGACAAAGAGGTCAGCAAAGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: PNGFRACTTMSK*PSVTKRSAKTS Trigger: TGAAGTCTTTGCTGACCTCTTTGTCACAGAAGGCAACTTTGACATGGTGGTGCAGGCCCTGAAGCCATTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS TCA 72 bp | GGGTTACATCTGCCTGCTCTAGCAGGTAACTGGCCTTaGACAGAAGTGGGTAGAGGTTGTAGGCTATATTGT | + |
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Preference number: 6 (lower is better) Translates to: GLHLPALAGNWP*TEVGRGCRLYC Trigger: ACAATATAGCCTACAACCTCTACCCACTTCTGTTCAAGGCCAGTTACCTGCTAGAGCAGGCAGATGTAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS GCA 72 bp | CCGGTTAGCTCGAAGCAGTACTGCTCGAAGATCCTCTaGAATCACGTCGTATTTCTGTTGGTCGAATTTGGA | + |
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Preference number: 6 (lower is better) Translates to: PVSSKQYCSKIL*NHVVFLLVEFG Trigger: TCCAAATTCGACCAACAGAAATACGACGTGATTGCAGAGGATCTTCGAGCAGTACTGCTTCGAGCTAACCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | CCTCTGCAATCACGTCGTATTTCTGTTGGTCGAATTTaGACACTGACAGTTCATCCTGAGGGTAGATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PLQSRRISVGRI*TLTVHPEGRWH Trigger: GTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCGACCAACAGAAATACGACGTGATTGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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| CDS CCA 72 bp | ACTCTTAGTGGGGTCTTCAAGGGGCTAAGCAATGTTTaGATCTTCCCAGTGAGTGTAGAGAAAGCCACACTT | + |
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Preference number: 6 (lower is better) Translates to: TLSGVFKGLSNV*IFPVSVEKATL Trigger: AAGTGTGGCTTTCTCTACACTCACTGGGAAGATCCAAACATTGCTTAGCCCCTTGAAGACCCCACTAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022064.5 |
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