Pregenerated sensors for LRRC10B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090291Ensembl transcript IDs: ENSMUST00000171400.4
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCACATGGTGCCTGTCCAGTGCCCCATGCCGTGCCAGCCACCCTaGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACAGAG | + |
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Preference number: 1 (lower is better) Translates to: RHMVPVQCPMPCQPP*LCPCKEMESAGSTE Trigger: CTCTGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTGGCTGGCACGGCATGGGGCACTGGACAGGCACCATGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR TCA 90 bp | TCTGAAGATGGCCTCAGGCCTGCCTGTGCCGGGCAGCTCATTCAATaGTGCTCCTTCACTGCCCCAAGTAAGAGGCCCAGCAACACCGTA | + |
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Preference number: 1 (lower is better) Translates to: SEDGLRPACAGQLIQ*CSFTAPSKRPSNTV Trigger: TACGGTGTTGCTGGGCCTCTTACTTGGGGCAGTGAAGGAGCATCATTGAATGAGCTGCCCGGCACAGGCAGGCCTGAGGCCATCTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR GCA 90 bp | TGGTCTGAAAACTGCCCAGAGGTCAGCCCAGGGACTCTTTCTTACTaGCTAGTACTGTCTGAAGATGGCCTCAGGCCTGCCTGTGCCGGG | + |
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Preference number: 1 (lower is better) Translates to: WSENCPEVSPGTLSY*LVLSEDGLRPACAG Trigger: CCCGGCACAGGCAGGCCTGAGGCCATCTTCAGACAGTACTAGGCAGTAAGAAAGAGTCCCTGGGCTGACCTCTGGGCAGTTTTCAGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR TCA 90 bp | CAGGAGGCCCTAGAGGCACAGTGGCATCTTCTCACACTTGATAACTaGGGGCACAGGCTGCAGGAGAGGAAAGATCTCTCTTTGCCCGGC | + |
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Preference number: 1 (lower is better) Translates to: QEALEAQWHLLTLDN*GHRLQERKDLSLPG Trigger: GCCGGGCAAAGAGAGATCTTTCCTCTCCTGCAGCCTGTGCCCTCAGTTATCAAGTGTGAGAAGATGCCACTGTGCCTCTAGGGCCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR GCA 90 bp | CCTGACAGTGTCCCTGAGTGTCCTCTGGCCCTCACCTCCTATTATTaGTTGGATCTGGCCCTGGGAATAGCAGAGCTTGTCTCCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PDSVPECPLALTSYY*LDLALGIAELVSSA Trigger: GGCTGAGGAGACAAGCTCTGCTATTCCCAGGGCCAGATCCAAGCAATAATAGGAGGTGAGGGCCAGAGGACACTCAGGGACACTGTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR GCA 90 bp | AGGCACAGTGGCATCTTCTCACACTTGATAACTGAGGGCACAGGCTaGAGGAGAGGAAAGATCTCTCTTTGCCCGGCAATAGTGCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: RHSGIFSHLITEGTG*RRGKISLCPAIVQH Trigger: GTGCTGCACTATTGCCGGGCAAAGAGAGATCTTTCCTCTCCTGCAGCCTGTGCCCTCAGTTATCAAGTGTGAGAAGATGCCACTGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR CCA 90 bp | ACCGGTTCATCTGTCGTGCCATCAGTGGCTCTATCCCAGACTTCTTaGTCTGAAAACTGCCCAGAGGTCAGCCCAGGGACTCTTTCTTAC | + |
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Preference number: 1 (lower is better) Translates to: TGSSVVPSVALSQTS*SENCPEVSPGTLSY Trigger: GTAAGAAAGAGTCCCTGGGCTGACCTCTGGGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGATGGCACGACAGATGAACCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGCCACCCTGGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACATCTTGGTCTGAAAACTaGCCAGAGGTCAGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CQPPWLCPCKEMESAGSTSWSEN*PEVSPG Trigger: CCCTGGGCTGACCTCTGGGCAGTTTTCAGACCAAGA...TGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTGGCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR CAA 90 bp | GACAGTGTCCCTGAGTGTCCTCTGGCCCTCACCTCCTATTATTGCTaGGATCTGGCCCTGGGAATAGCAGAGCTTGTCTCCTCAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: DSVPECPLALTSYYC*DLALGIAELVSSAL Trigger: AAGGGCTGAGGAGACAAGCTCTGCTATTCCCAGGGCCAGATCCAAGCAATAATAGGAGGTGAGGGCCAGAGGACACTCAGGGACACTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCTATTATTGCTTGGATCTGGCCCTGGGAATAGCAGAGCTTGTCTCCTCCCGTGCCAGCCACCCTaGCTGTGCCCATGTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HLLLLLGSGPGNSRACLLPCQPP*LCPCKE Trigger: TTCCTTACATGGGCACAGCCAGGGTGGCTGGCACGG...GAGGAGACAAGCTCTGCTATTCCCAGGGCCAGATCCAAGCAATAATAGGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCTATTATTGCTTGGATCTGGCCCTGGGAATAGCAGAGCTTGTCTCCTCAGCAACCTCCTAGAGTaGAGAGCCCCTCTCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: HLLLLLGSGPGNSRACLLSNLLE*RAPLSW Trigger: CCAAGAGAGAGGGGCTCTGCACTCTAGGAGGTTGCT...GAGGAGACAAGCTCTGCTATTCCCAGGGCCAGATCCAAGCAATAATAGGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACACTTGATAACTGAGGGCACAGGCTGCAGGAGAGGAAAGATCTCTCTTCTGCCTAGTACTGTCTaGAGATGGCCTCAGGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: FSHLITEGTGCRRGKISLLPSTV*RWPQAC Trigger: GCAGGCCTGAGGCCATCTTCAGACAGTACTAGGCAG...AAGAGAGATCTTTCCTCTCCTGCAGCCTGTGCCCTCAGTTATCAAGTGTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR-3UTR GCA 90 bp | CACCCTGGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACAGAGGCCCGGGACTCTTTCTTACTaGCTAGTACTGTCTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: HPGCAHVRKWRVQAVQRPGTLSY*LVLSED Trigger: ATCTTCAGACAGTACTAGGCAGTAAGAAAGAGTCCC...GGGCCTCTGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTATAGATGCCCTGACATCCAGAGTCAGAGTAGGGATGATTCTACGGATAAGATGGCCTCAGGCCTaGCTGTGCCGGGCAGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: KVIDALTSRVRVGMILRIRWPQA*LCRAAH Trigger: ATGAGCTGCCCGGCACAGGCAGGCCTGAGGCCATCT...TATCCGTAGAATCATCCCTACTCTGACTCTGGATGTCAGGGCATCTATAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR TCA 72 bp | GGCCTCAGGCCTGCCTGTGCCGGGCAGCTCATTCAATaGTGCTCCTTCACTGCCCCAAGTAAGAGGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: GLRPACAGQLIQ*CSFTAPSKRPS Trigger: GCTGGGCCTCTTACTTGGGGCAGTGAAGGAGCATCATTGAATGAGCTGCCCGGCACAGGCAGGCCTGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR CCA 72 bp | GGGCTCCAGCCCCTGACAGTGTCCCTGAGTGTCCTCTaGCCCTCACCTCCTATTATTGCTTGGATCTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GLQPLTVSLSVL*PSPPIIAWIWP Trigger: GGGCCAGATCCAAGCAATAATAGGAGGTGAGGGCCAGAGGACACTCAGGGACACTGTCAGGGGCTGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR TCA 72 bp | CTAGAGGCACAGTGGCATCTTCTCACACTTGATAACTaGGGGCACAGGCTGCAGGAGAGGAAAGATCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LEAQWHLLTLDN*GHRLQERKDLS Trigger: AGAGAGATCTTTCCTCTCCTGCAGCCTGTGCCCTCAGTTATCAAGTGTGAGAAGATGCCACTGTGCCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR GCA 72 bp | GGCATCTTCTCACACTTGATAACTGAGGGCACAGGCTaGAGGAGAGGAAAGATCTCTCTTTGCCCGGCAATA | + |
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Preference number: 3 (lower is better) Translates to: GIFSHLITEGTG*RRGKISLCPAI Trigger: TATTGCCGGGCAAAGAGAGATCTTTCCTCTCCTGCAGCCTGTGCCCTCAGTTATCAAGTGTGAGAAGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR TCA 72 bp | ATCCAGAGTCAGAGTAGGGATGATTCTACGGATAAGTaGTGGCCCTGGTTCCAGGTGAGAACCGGTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: IQSQSRDDSTDK*WPWFQVRTGSS Trigger: AGATGAACCGGTTCTCACCTGGAACCAGGGCCATCACTTATCCGTAGAATCATCCCTACTCTGACTCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | TACTGCCTAGTACTGTCTGAAGATGGCCTCAGGCCTGCCTGTGCCGGGCAGCTCTGTGCAGCCGGCCCATaGGCAACAGCGCGGGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: YCLVLSEDGLRPACAGQLCAAGP*ATARAG Trigger: TCCCGCCCGCGCTGTTGCGCATGGGCCGGCTGCACA...GAGCTGCCCGGCACAGGCAGGCCTGAGGCCATCTTCAGACAGTACTAGGCAGTA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR TCA 90 bp | CACCCTGGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACAGAGGCCCCCAGGTAGAGGCGCGTaGGGCGCGGTAGGCGACACA | + |
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Preference number: 4 (lower is better) Translates to: HPGCAHVRKWRVQAVQRPPGRGA*GAVGDT Trigger: TGTGTCGCCTACCGCGCCTCACGCGCCTCTACCTGG...GGGCCTCTGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CCA 90 bp | TGGCCTCAGGCCTGCCTGTGCCGGGCAGCTCATTCAATGATGCTCCTTCACTGCCTGCGCAAAGTCGGGTaGCAGCGCCAGCAGACGGTT | + |
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Preference number: 4 (lower is better) Translates to: WPQACLCRAAHSMMLLHCLRKVG*QRQQTV Trigger: AACCGTCTGCTGGCGCTGCCACCCGACTTTGCGCAG...GCAGTGAAGGAGCATCATTGAATGAGCTGCCCGGCACAGGCAGGCCTGAGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | GATCTGGCCCTGGGAATAGCAGAGCTTGTCTCCTCAGCCCTTCAGAGGCTGTCCCGGTTGTCGCCCATCTaGAGCGATTGCAGCGCCACC | + |
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Preference number: 4 (lower is better) Translates to: DLALGIAELVSSALQRLSRLSPI*SDCSAT Trigger: GGTGGCGCTGCAATCGCTGCAGATGGGCGACAACCG...GGACAGCCTCTGAAGGGCTGAGGAGACAAGCTCTGCTATTCCCAGGGCCAGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | ACTCTTTCTTACTGCCTAGTACTGTCTGAAGATGGCCTCAGGCCTGCCTGTGCCCACGCAAGCCGGTCATaGGCGGCAGCTCGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TLSYCLVLSEDGLRPACAHASRS*AAARRA Trigger: TGCCCGCCGAGCTGCCGCGCATGACCGGCTTGCGTG...GGCACAGGCAGGCCTGAGGCCATCTTCAGACAGTACTAGGCAGTAAGAAAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGGCTCTATCCCAGACTTCTTGGTCTGAAAACTGCCCAGAGGTCAGCCCAAGCGCACGAAGCGGGTaGAGGTCGGGGAAGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SVALSQTSWSENCPEVSPSARSG*RSGKPP Trigger: GGGCGGCTTCCCCGACCTGCACCCGCTTCGTGCGCT...TGGGCTGACCTCTGGGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CCA 90 bp | CTCTCTTTGCCCGGCAATAGTGCAGCACAGGCTGAGAGAAAAGATCCGGAGGAAGGAGGCTGTCCCTGGTaGGCCCCAGAGCCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSLPGNSAAQAERKDPEEGGCPW*APEPWV Trigger: GACCCAGGGCTCTGGGGCCCACCAGGGACAGCCTCC...TTCCTCCGGATCTTTTCTCTCAGCCTGTGCTGCACTATTGCCGGGCAAAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | TGCCAGCCACCCTGGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACAAGGCAGCGCAGGCTCTaGAGCTGCGCAAAGTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: CQPPWLCPCKEMESAGSTRQRRL*SCAKSG Trigger: ACCCGACTTTGCGCAGCTGCAGAGCCTGCGCTGCCT...TGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTGGCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CCA 90 bp | CATCTGTCGTGCCATCAGTGGCTCTATCCCAGACTTCTTGGTCTGAAAACTGCCCTCGGAGGCTGTCCCTaGTGGGCCCCAGAGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HLSCHQWLYPRLLGLKTALGGCP*WAPEPW Trigger: CCAGGGCTCTGGGGCCCACCAGGGACAGCCTCCGAG...GGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGATGGCACGACAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | ATGGCCCTGGTTCCAGGTGAGAACCGGTTCATCTGTCGTGCCATCAGTGGCTCTTCGAGGTCTAGGATGTaGAGCCGGCCCATGCGCAAC | + |
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Preference number: 4 (lower is better) Translates to: MALVPGENRFICRAISGSSRSRM*SRPMRN Trigger: GTTGCGCATGGGCCGGCTGCACATCCTAGACCTCGA...AGAGCCACTGATGGCACGACAGATGAACCGGTTCTCACCTGGAACCAGGGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CCA 90 bp | GCCAGCCACCCTGGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACAGCGGGGGTCCAGTGACTaGGTTGTGGTCGTAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: ASHPGCAHVRKWRVQAVQRGSSD*VVVVGE Trigger: TTCTCCTACGACCACAACCCAGTCACTGGACCCCCG...CTGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTGGCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CCA 90 bp | GCCAGCCACCCTGGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACAGTCAGGTGCCCAATCCTaGAGGAGCTTCCAAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: ASHPGCAHVRKWRVQAVQSGAQS*RSFQGS Trigger: CGAGCCTTGGAAGCTCCTCCAGGATTGGGCACCTGA...CTGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTGGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR TCA 90 bp | TCAGTGGCTCTATCCCAGACTTCTTGGTCTGAAAACTGCCCAGAGGTCAGCCCAGGCGCTCCAGCTTGTTaGAGTCGAGCGCCAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SVALSQTSWSENCPEVSPGAPAC*SRAPGC Trigger: GCATCCTGGCGCTCGACTTCAACAAGCTGGAGCGCC...TGGGCTGACCTCTGGGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | CATCAGTGGCTCTATCCCAGACTTCTTGGTCTGAAAACTGCCCAGAGGTCAGCCGCTCGCGCAGCCCGGTaGCGCTCACATACAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HQWLYPRLLGLKTAQRSAARAAR*RSHTAS Trigger: AGAAGCTGTATGTGAGCGGCACCGGGCTGCGCGAGC...GGCTGACCTCTGGGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | CATCTGTCGTGCCATCAGTGGCTCTATCCCAGACTTCTTGGTCTGAAAACTGCCAGTCGAGCGCCAGGATaGGCAGCTCGCGCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HLSCHQWLYPRLLGLKTASRAPG*AARAAP Trigger: AGGAGCTGCGCGAGCTGCGCATCCTGGCGCTCGACT...GGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGATGGCACGACAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGGCTCTATCCCAGACTTCTTGGTCTGAAAACTGCCCAGAGGTCAGCCCAAGCCGCCCAGGCGGTTaGGGTCGAGGTCTAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: SVALSQTSWSENCPEVSPSRPGG*GRGLGC Trigger: ACATCCTAGACCTCGACCGCAACCGCCTGGGCGGCT...TGGGCTGACCTCTGGGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | CCAAGTGAAAGTTATAGATGCCCTGACATCCAGAGTCAGAGTAGGGATGATTCTTCGCCGCTGCGCAGCTaGTCCTCGGCGTCCGACGGC | + |
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Preference number: 4 (lower is better) Translates to: PSESYRCPDIQSQSRDDSSPLRS*SSASDG Trigger: GCCGTCGGACGCCGAGGAGCAGCTGCGCAGCGGCGA...AGAATCATCCCTACTCTGACTCTGGATGTCAGGGCATCTATAACTTTCACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | CATCAGTGGCTCTATCCCAGACTTCTTGGTCTGAAAACTGCCCAGAGGTCAGCCAGCGCCGCAGGAAGTTaGCTTCGATCCAGAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HQWLYPRLLGLKTAQRSASAAGS*LRSRGS Trigger: GCTGCCTCTGGATCGAAGGCAACTTCCTGCGGCGCT...GGCTGACCTCTGGGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | ATGGCCCTGGTTCCAGGTGAGAACCGGTTCATCTGTCGTGCCATCAGTGGCTCTACTCTTCGAAGCGATTaGCGTAGAGCCAGAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: MALVPGENRFICRAISGSTLRSD*RRARGH Trigger: GTGGCCTCTGGCTCTACGGCAATCGCTTCGAAGAGT...AGAGCCACTGATGGCACGACAGATGAACCGGTTCTCACCTGGAACCAGGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR CAA 72 bp | GGAGAACTGGGGCCCCAGTCTATGTCTACTTCTGTCTaGGACATAGTCCCTATGCCCTGCCTCTGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GELGPQSMSTSV*DIVPMPCLWPE Trigger: TTCTGGCCAGAGGCAGGGCATAGGGACTATGTCCAAGACAGAAGTAGACATAGACTGGGGCCCCAGTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| 3UTR CAA 72 bp | CCTGAGTGTCCTCTGGCCCTCACCTCCTATTATTGCTaGGATCTGGCCCTGGGAATAGCAGAGCTTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PECPLALTSYYC*DLALGIAELVS Trigger: GGAGACAAGCTCTGCTATTCCCAGGGCCAGATCCAAGCAATAATAGGAGGTGAGGGCCAGAGGACACTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR TCA 90 bp | CCAAGTGAAAGTTATAGATGCCCTGACATCCAGAGTCAGAGTAGGGATGATTCTCCCGCGGGGGTCCAGTaGCTGGGTTGTGGTCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PSESYRCPDIQSQSRDDSPAGVQ*LGCGRR Trigger: CCTACGACCACAACCCAGTCACTGGACCCCCGCGGG...AGAATCATCCCTACTCTGACTCTGGATGTCAGGGCATCTATAACTTTCACTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR TCA 90 bp | CATCAGTGGCTCTATCCCAGACTTCTTGGTCTGAAAACTGCCCAGAGGTCAGCCGTCCTGCGCCTCCTATaGGTAGGTCTTCTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HQWLYPRLLGLKTAQRSAVLRLL*VGLLPP Trigger: AGGAGGAAGAAGACCTACTCATAGGAGGCGCAGGAC...GGCTGACCTCTGGGCAGTTTTCAGACCAAGAAGTCTGGGATAGAGCCACTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | AAAGTTATAGATGCCCTGACATCCAGAGTCAGAGTAGGGATGATTCTACGGATACCCATCTGCAGCGATTaGAGCGCCACCAGGCGCAAC | + |
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Preference number: 4 (lower is better) Translates to: KVIDALTSRVRVGMILRIPICSD*SATRRN Trigger: GTTGCGCCTGGTGGCGCTGCAATCGCTGCAGATGGG...TATCCGTAGAATCATCCCTACTCTGACTCTGGATGTCAGGGCATCTATAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR GCA 90 bp | AAAGTTATAGATGCCCTGACATCCAGAGTCAGAGTAGGGATGATTCTACGGATACTCACATACAGCTTCTaGAAGCGGCTCAATGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: KVIDALTSRVRVGMILRILTYSF*KRLNAH Trigger: GTGCGCATTGAGCCGCTTGCAGAAGCTGTATGTGAG...TATCCGTAGAATCATCCCTACTCTGACTCTGGATGTCAGGGCATCTATAACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | ACGGCGCTAGGCAGCCGCCGCAACCGCCGCCCGCTCAGCTCCAGCTaGTGCTCGCCGCTGCGCAGCTGCTCCTCGGCGTCCGACGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TALGSRRNRRPLSSS*CSPLRSCSSASDGS Trigger: GCTGCCGTCGGACGCCGAGGAGCAGCTGCGCAGCGGCGAGCAGCAGCTGGAGCTGAGCGGGCGGCGGTTGCGGCGGCTGCCTAGCGCCGT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS TCA 90 bp | CGGGTGGCAGCGCCAGCAGACGGTTGCCGCCCAGGTAGAGGCGCGTaGGGCGCGGTAGGCGACACAGGCCGTCGGGCAGGCGCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RVAAPADGCRPGRGA*GAVGDTGRRAGAPA Trigger: AGCTGGAGCGCCTGCCCGACGGCCTGTGTCGCCTACCGCGCCTCACGCGCCTCTACCTGGGCGGCAACCGTCTGCTGGCGCTGCCACCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | GCGCAGCCCGGTGCCGCTCACATACAGCTTCTGCAAGCGGCTCAATaGGCACACGGCGCTAGGCAGCCGCCGCAACCGCCGCCCGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: AQPGAAHIQLLQAAQ*AHGARQPPQPPPAQ Trigger: CTGAGCGGGCGGCGGTTGCGGCGGCTGCCTAGCGCCGTGTGCGCATTGAGCCGCTTGCAGAAGCTGTATGTGAGCGGCACCGGGCTGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | GGAGCGCACGAAGCGGGTGCAGGTCGGGGAAGCCGCCCAGGCGGTTaGGGTCGAGGTCTAGGATGTGCAGCCGGCCCATGCGCAACAGCG | + |
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Preference number: 5 (lower is better) Translates to: GAHEAGAGRGSRPGG*GRGLGCAAGPCATA Trigger: CGCTGTTGCGCATGGGCCGGCTGCACATCCTAGACCTCGACCGCAACCGCCTGGGCGGCTTCCCCGACCTGCACCCGCTTCGTGCGCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CCA 90 bp | CATCATCAAAGGCCCGGGTTGGACGCCGGGCTGGCTGCCGCGGAATaGGTTCGTCGCGCTCAGCCATGCGCTCGACGGCTCCCTCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: HHQRPGLDAGLAAAE*VRRAQPCARRLPRP Trigger: TGGGCGAGGGAGCCGTCGAGCGCATGGCTGAGCGCGACGAACCCATTCCGCGGCAGCCAGCCCGGCGTCCAACCCGGGCCTTTGATGATG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS TCA 90 bp | GGCGCGGTAGGCGACACAGGCCGTCGGGCAGGCGCTCCAGCTTGTTaGAGTCGAGCGCCAGGATGCGCAGCTCGCGCAGCTCCTCGATCT | + |
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Preference number: 5 (lower is better) Translates to: GAVGDTGRRAGAPAC*SRAPGCAARAAPRS Trigger: AGATCGAGGAGCTGCGCGAGCTGCGCATCCTGGCGCTCGACTTCAACAAGCTGGAGCGCCTGCCCGACGGCCTGTGTCGCCTACCGCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | GCCGGCCCATGCGCAACAGCGCGGGCGGGAACTCTTCGAAGCGATTaGCGTAGAGCCAGAGGCCACGCAAGCCGGTCATGCGCGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: AGPCATARAGTLRSD*RRARGHASRSCAAA Trigger: AGCTGCCGCGCATGACCGGCTTGCGTGGCCTCTGGCTCTACGGCAATCGCTTCGAAGAGTTCCCGCCCGCGCTGTTGCGCATGGGCCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | AGGTCGGGGAAGCCGCCCAGGCGGTTGCGGTCGAGGTCTAGGATGTaGAGCCGGCCCATGCGCAACAGCGCGGGCGGGAACTCTTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: RSGKPPRRLRSRSRM*SRPMRNSAGGNSSK Trigger: CTTCGAAGAGTTCCCGCCCGCGCTGTTGCGCATGGGCCGGCTGCACATCCTAGACCTCGACCGCAACCGCCTGGGCGGCTTCCCCGACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | GACGCCGGGCTGGCTGCCGCGGAATGGGTTCGTCGCGCTCAGCCATaGGCTCGACGGCTCCCTCGCCCACTAGGAAAACGGTGTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: DAGLAAAEWVRRAQP*ARRLPRPLGKRCLP Trigger: TGGCAGACACCGTTTTCCTAGTGGGCGAGGGAGCCGTCGAGCGCATGGCTGAGCGCGACGAACCCATTCCGCGGCAGCCAGCCCGGCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | TCCTCGGGAAGCTCGCGCAGCCCGGTGCCGCTCACATACAGCTTCTaGAAGCGGCTCAATGCGCACACGGCGCTAGGCAGCCGCCGCAAC | + |
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Preference number: 5 (lower is better) Translates to: SSGSSRSPVPLTYSF*KRLNAHTALGSRRN Trigger: GTTGCGGCGGCTGCCTAGCGCCGTGTGCGCATTGAGCCGCTTGCAGAAGCTGTATGTGAGCGGCACCGGGCTGCGCGAGCTTCCCGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | CGCAGGAAGTTGCCTTCGATCCAGAGGCAGCGCAGGCTCTGCAGCTaGGCAAAGTCGGGTGGCAGCGCCAGCAGACGGTTGCCGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RRKLPSIQRQRRLCS*AKSGGSASRRLPPR Trigger: CCTGGGCGGCAACCGTCTGCTGGCGCTGCCACCCGACTTTGCGCAGCTGCAGAGCCTGCGCTGCCTCTGGATCGAAGGCAACTTCCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CCA 90 bp | TTCGATCCAGAGGCAGCGCAGGCTCTGCAGCTGCGCAAAGTCGGGTaGCAGCGCCAGCAGACGGTTGCCGCCCAGGTAGAGGCGCGTGAG | + |
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Preference number: 5 (lower is better) Translates to: FDPEAAQALQLRKVG*QRQQTVAAQVEARE Trigger: CTCACGCGCCTCTACCTGGGCGGCAACCGTCTGCTGGCGCTGCCACCCGACTTTGCGCAGCTGCAGAGCCTGCGCTGCCTCTGGATCGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | AAGCGCCGCAGGAAGTTGCCTTCGATCCAGAGGCAGCGCAGGCTCTaGAGCTGCGCAAAGTCGGGTGGCAGCGCCAGCAGACGGTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: KRRRKLPSIQRQRRL*SCAKSGGSASRRLP Trigger: CGGCAACCGTCTGCTGGCGCTGCCACCCGACTTTGCGCAGCTGCAGAGCCTGCGCTGCCTCTGGATCGAAGGCAACTTCCTGCGGCGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | GCGCCACCAGGCGCAACAACGGCCGCGGAAAGCGCCGCAGGAAGTTaGCTTCGATCCAGAGGCAGCGCAGGCTCTGCAGCTGCGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: APPGATTAAESAAGS*LRSRGSAGSAAAQS Trigger: ACTTTGCGCAGCTGCAGAGCCTGCGCTGCCTCTGGATCGAAGGCAACTTCCTGCGGCGCTTTCCGCGGCCGTTGTTGCGCCTGGTGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | CGCCCAGGCGGTTGCGGTCGAGGTCTAGGATGTGCAGCCGGCCCATaGGCAACAGCGCGGGCGGGAACTCTTCGAAGCGATTGCCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: RPGGCGRGLGCAAGP*ATARAGTLRSDCRR Trigger: TCTACGGCAATCGCTTCGAAGAGTTCCCGCCCGCGCTGTTGCGCATGGGCCGGCTGCACATCCTAGACCTCGACCGCAACCGCCTGGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 90 bp | TCTTCCTCCTCATCATCAAAGGCCCGGGTTGGACGCCGGGCTGGCTaGCGCGGAATGGGTTCGTCGCGCTCAGCCATGCGCTCGACGGCT | + |
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Preference number: 5 (lower is better) Translates to: SSSSSSKARVGRRAG*RGMGSSRSAMRSTA Trigger: AGCCGTCGAGCGCATGGCTGAGCGCGACGAACCCATTCCGCGGCAGCCAGCCCGGCGTCCAACCCGGGCCTTTGATGATGAGGAGGAAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CCA 90 bp | GTCTTCTTCCTCCTCATCATCAAAGGCCCGGGTTGGACGCCGGGCTaGCTGCCGCGGAATGGGTTCGTCGCGCTCAGCCATGCGCTCGAC | + |
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Preference number: 5 (lower is better) Translates to: VFFLLIIKGPGWTPG*LPRNGFVALSHALD Trigger: GTCGAGCGCATGGCTGAGCGCGACGAACCCATTCCGCGGCAGCCAGCCCGGCGTCCAACCCGGGCCTTTGATGATGAGGAGGAAGAAGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CAA 90 bp | ATGGCCCTGGTTCCAGGTGAGAACCGGTTCATCTGTCGTGCCATCAGTGGCTCTAAGCCGCCCAGGCGGTaGCGGTCGAGGTCTAGGATG | + |
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Preference number: 5 (lower is better) Translates to: MALVPGENRFICRAISGSKPPRR*RSRSRM Trigger: CATCCTAGACCTCGACCGCAACCGCCTGGGCGGCTT...AGAGCCACTGATGGCACGACAGATGAACCGGTTCTCACCTGGAACCAGGGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CAA 90 bp | GCCAGCCACCCTGGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACAGAGGCGCTCCAGCTTGTaGAAGTCGAGCGCCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: ASHPGCAHVRKWRVQAVQRRSSL*KSSARM Trigger: CATCCTGGCGCTCGACTTCAACAAGCTGGAGCGCCT...CTGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTGGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CAA 90 bp | TGCCAGCCACCCTGGCTGTGCCCATGTAAGGAAATGGAGAGTGCAGGCAGTACAAAGCGCCGCAGGAAGTaGCCTTCGATCCAGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: CQPPWLCPCKEMESAGSTKRRRK*PSIQRQ Trigger: CTGCCTCTGGATCGAAGGCAACTTCCTGCGGCGCTT...TGTACTGCCTGCACTCTCCATTTCCTTACATGGGCACAGCCAGGGTGGCTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS-3UTR CAA 90 bp | ACTCTTTCTTACTGCCTAGTACTGTCTGAAGATGGCCTCAGGCCTGCCTGTGCCGCCCATCTGCAGCGATaGCAGCGCCACCAGGCGCAA | + |
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Preference number: 5 (lower is better) Translates to: TLSYCLVLSEDGLRPACAAHLQR*QRHQAQ Trigger: TTGCGCCTGGTGGCGCTGCAATCGCTGCAGATGGGC...GGCACAGGCAGGCCTGAGGCCATCTTCAGACAGTACTAGGCAGTAAGAAAGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | GGCAGCCGCCGCAACCGCCGCCCGCTCAGCTCCAGCTaGTGCTCGCCGCTGCGCAGCTGCTCCTCGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GSRRNRRPLSSS*CSPLRSCSSAS Trigger: GGACGCCGAGGAGCAGCTGCGCAGCGGCGAGCAGCAGCTGGAGCTGAGCGGGCGGCGGTTGCGGCGGCTGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | AGCCGCCGCAACCGCCGCCCGCTCAGCTCCAGCTGCTaGTCGCCGCTGCGCAGCTGCTCCTCGGCGTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: SRRNRRPLSSSC*SPLRSCSSASD Trigger: GTCGGACGCCGAGGAGCAGCTGCGCAGCGGCGAGCAGCAGCTGGAGCTGAGCGGGCGGCGGTTGCGGCGGCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS TCA 72 bp | GCGCCAGCAGACGGTTGCCGCCCAGGTAGAGGCGCGTaGGGCGCGGTAGGCGACACAGGCCGTCGGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: APADGCRPGRGA*GAVGDTGRRAG Trigger: GCCTGCCCGACGGCCTGTGTCGCCTACCGCGCCTCACGCGCCTCTACCTGGGCGGCAACCGTCTGCTGGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CCA 72 bp | AGGCCCGGGTTGGACGCCGGGCTGGCTGCCGCGGAATaGGTTCGTCGCGCTCAGCCATGCGCTCGACGGCTC | + |
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Preference number: 6 (lower is better) Translates to: RPGLDAGLAAAE*VRRAQPCARRL Trigger: GAGCCGTCGAGCGCATGGCTGAGCGCGACGAACCCATTCCGCGGCAGCCAGCCCGGCGTCCAACCCGGGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 90 bp | CGGAGCGCACGAAGCGGGTGCAGGTCGGGGAAGCCGCCCAGGCGGTaGCGGTCGAGGTCTAGGATGTGCAGCCGGCCCATGCGCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: RSARSGCRSGKPPRR*RSRSRMCSRPMRNS Trigger: GCTGTTGCGCATGGGCCGGCTGCACATCCTAGACCTCGACCGCAACCGCCTGGGCGGCTTCCCCGACCTGCACCCGCTTCGTGCGCTCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | AAGCCGCCCAGGCGGTTGCGGTCGAGGTCTAGGATGTaGAGCCGGCCCATGCGCAACAGCGCGGGCGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: KPPRRLRSRSRM*SRPMRNSAGGN Trigger: GTTCCCGCCCGCGCTGTTGCGCATGGGCCGGCTGCACATCCTAGACCTCGACCGCAACCGCCTGGGCGGCTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | GAAGCGGGTGCAGGTCGGGGAAGCCGCCCAGGCGGTTaGGGTCGAGGTCTAGGATGTGCAGCCGGCCCATGC | + |
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Preference number: 6 (lower is better) Translates to: EAGAGRGSRPGG*GRGLGCAAGPC Trigger: GCATGGGCCGGCTGCACATCCTAGACCTCGACCGCAACCGCCTGGGCGGCTTCCCCGACCTGCACCCGCTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 72 bp | CGAAGCGGGTGCAGGTCGGGGAAGCCGCCCAGGCGGTaGCGGTCGAGGTCTAGGATGTGCAGCCGGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: RSGCRSGKPPRR*RSRSRMCSRPM Trigger: CATGGGCCGGCTGCACATCCTAGACCTCGACCGCAACCGCCTGGGCGGCTTCCCCGACCTGCACCCGCTTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 90 bp | GTGAGGCGCGGTAGGCGACACAGGCCGTCGGGCAGGCGCTCCAGCTaGTTGAAGTCGAGCGCCAGGATGCGCAGCTCGCGCAGCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VRRGRRHRPSGRRSS*LKSSARMRSSRSSS Trigger: CGAGGAGCTGCGCGAGCTGCGCATCCTGGCGCTCGACTTCAACAAGCTGGAGCGCCTGCCCGACGGCCTGTGTCGCCTACCGCGCCTCAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 90 bp | AGGCGCGGTAGGCGACACAGGCCGTCGGGCAGGCGCTCCAGCTTGTaGAAGTCGAGCGCCAGGATGCGCAGCTCGCGCAGCTCCTCGATC | + |
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Preference number: 6 (lower is better) Translates to: RRGRRHRPSGRRSSL*KSSARMRSSRSSSI Trigger: GATCGAGGAGCTGCGCGAGCTGCGCATCCTGGCGCTCGACTTCAACAAGCTGGAGCGCCTGCCCGACGGCCTGTGTCGCCTACCGCGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS TCA 72 bp | GGCGACACAGGCCGTCGGGCAGGCGCTCCAGCTTGTTaGAGTCGAGCGCCAGGATGCGCAGCTCGCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GDTGRRAGAPAC*SRAPGCAARAA Trigger: AGCTGCGCGAGCTGCGCATCCTGGCGCTCGACTTCAACAAGCTGGAGCGCCTGCCCGACGGCCTGTGTCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CCA 72 bp | GAGGCAGCGCAGGCTCTGCAGCTGCGCAAAGTCGGGTaGCAGCGCCAGCAGACGGTTGCCGCCCAGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: EAAQALQLRKVG*QRQQTVAAQVE Trigger: CTCTACCTGGGCGGCAACCGTCTGCTGGCGCTGCCACCCGACTTTGCGCAGCTGCAGAGCCTGCGCTGCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 72 bp | AGGCGACACAGGCCGTCGGGCAGGCGCTCCAGCTTGTaGAAGTCGAGCGCCAGGATGCGCAGCTCGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RRHRPSGRRSSL*KSSARMRSSRS Trigger: GCTGCGCGAGCTGCGCATCCTGGCGCTCGACTTCAACAAGCTGGAGCGCCTGCCCGACGGCCTGTGTCGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 72 bp | GGTAGGCGACACAGGCCGTCGGGCAGGCGCTCCAGCTaGTTGAAGTCGAGCGCCAGGATGCGCAGCTCGCGC | + |
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Preference number: 6 (lower is better) Translates to: GRRHRPSGRRSS*LKSSARMRSSR Trigger: GCGCGAGCTGCGCATCCTGGCGCTCGACTTCAACAAGCTGGAGCGCCTGCCCGACGGCCTGTGTCGCCTACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | GGTGCCGCTCACATACAGCTTCTGCAAGCGGCTCAATaGGCACACGGCGCTAGGCAGCCGCCGCAACCGCCG | + |
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Preference number: 6 (lower is better) Translates to: GAAHIQLLQAAQ*AHGARQPPQPP Trigger: CGGCGGTTGCGGCGGCTGCCTAGCGCCGTGTGCGCATTGAGCCGCTTGCAGAAGCTGTATGTGAGCGGCACC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | CTGGCTGCCGCGGAATGGGTTCGTCGCGCTCAGCCATaGGCTCGACGGCTCCCTCGCCCACTAGGAAAACGG | + |
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Preference number: 6 (lower is better) Translates to: LAAAEWVRRAQP*ARRLPRPLGKR Trigger: CCGTTTTCCTAGTGGGCGAGGGAGCCGTCGAGCGCATGGCTGAGCGCGACGAACCCATTCCGCGGCAGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 90 bp | AGCGCCACCAGGCGCAACAACGGCCGCGGAAAGCGCCGCAGGAAGTaGCCTTCGATCCAGAGGCAGCGCAGGCTCTGCAGCTGCGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SATRRNNGRGKRRRK*PSIQRQRRLCSCAK Trigger: CTTTGCGCAGCTGCAGAGCCTGCGCTGCCTCTGGATCGAAGGCAACTTCCTGCGGCGCTTTCCGCGGCCGTTGTTGCGCCTGGTGGCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | AGCTCGCGCAGCCCGGTGCCGCTCACATACAGCTTCTaGAAGCGGCTCAATGCGCACACGGCGCTAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRSPVPLTYSF*KRLNAHTALGS Trigger: GCTGCCTAGCGCCGTGTGCGCATTGAGCCGCTTGCAGAAGCTGTATGTGAGCGGCACCGGGCTGCGCGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | GGCGCAACAACGGCCGCGGAAAGCGCCGCAGGAAGTTaGCTTCGATCCAGAGGCAGCGCAGGCTCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GATTAAESAAGS*LRSRGSAGSAA Trigger: AGCTGCAGAGCCTGCGCTGCCTCTGGATCGAAGGCAACTTCCTGCGGCGCTTTCCGCGGCCGTTGTTGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 72 bp | AGGCGCAACAACGGCCGCGGAAAGCGCCGCAGGAAGTaGCCTTCGATCCAGAGGCAGCGCAGGCTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RRNNGRGKRRRK*PSIQRQRRLCS Trigger: GCTGCAGAGCCTGCGCTGCCTCTGGATCGAAGGCAACTTCCTGCGGCGCTTTCCGCGGCCGTTGTTGCGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | TGCGCAACAGCGCGGGCGGGAACTCTTCGAAGCGATTaGCGTAGAGCCAGAGGCCACGCAAGCCGGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: CATARAGTLRSD*RRARGHASRSC Trigger: GCATGACCGGCTTGCGTGGCCTCTGGCTCTACGGCAATCGCTTCGAAGAGTTCCCGCCCGCGCTGTTGCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | GGTTGCGGTCGAGGTCTAGGATGTGCAGCCGGCCCATaGGCAACAGCGCGGGCGGGAACTCTTCGAAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: GCGRGLGCAAGP*ATARAGTLRSD Trigger: ATCGCTTCGAAGAGTTCCCGCCCGCGCTGTTGCGCATGGGCCGGCTGCACATCCTAGACCTCGACCGCAACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | GCTCCTCGATCTCCTCGGGAAGCTCGCGCAGCCCGGTaGCGCTCACATACAGCTTCTGCAAGCGGCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: APRSPREARAAR*RSHTASASGSM Trigger: CATTGAGCCGCTTGCAGAAGCTGTATGTGAGCGGCACCGGGCTGCGCGAGCTTCCCGAGGAGATCGAGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS GCA 72 bp | AGGAAGTTGCCTTCGATCCAGAGGCAGCGCAGGCTCTaGAGCTGCGCAAAGTCGGGTGGCAGCGCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RKLPSIQRQRRL*SCAKSGGSASR Trigger: TCTGCTGGCGCTGCCACCCGACTTTGCGCAGCTGCAGAGCCTGCGCTGCCTCTGGATCGAAGGCAACTTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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| CDS CAA 72 bp | GTAGGTCTTCTTCCTCCTCATCATCAAAGGCCCGGGTaGGACGCCGGGCTGGCTGCCGCGGAATGGGTTCGT | + |
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Preference number: 6 (lower is better) Translates to: VGLLPPHHQRPG*DAGLAAAEWVR Trigger: ACGAACCCATTCCGCGGCAGCCAGCCCGGCGTCCAACCCGGGCCTTTGATGATGAGGAGGAAGAAGACCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171400.4 |
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