Pregenerated sensors for LRRC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032352Ensembl transcript IDs: ENSMUST00000113421.10, ENSMUST00000183467.2, ENSMUST00000183734.2, ENSMUST00000183873.8
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGCTACTGGTACGCGGATGGACTGAGGGATGCAGAAGGCACTTaGTGCAAGAGCAGCATCCTGGCAGAGGGATGGTGGACGCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: GGYWYADGLRDAEGT*CKSSILAEGWWTQG Trigger: TCCTTGCGTCCACCATCCCTCTGCCAGGATGCTGCTCTTGCACCAAGTGCCTTCTGCATCCCTCAGTCCATCCGCGTACCAGTAGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR CCA 90 bp | CTGTGCTTTTCTGCTGTGTGCTGTTACCCAGGTGGCCCATGCCTCTaGAGCAGGCACAGCCTGATGCTGCACACACCCGAGCTGAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: LCFSAVCCYPGGPCL*SRHSLMLHTPELSQ Trigger: CTGACTCAGCTCGGGTGTGTGCAGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR GCA 90 bp | GACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTaGAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: DHTQAPILLLKDATV*SRCDRTGYSKARSG Trigger: TCCACTCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR CCA 90 bp | CTCGGAGGTCAATGCTACACCGATGTGGTCACGCGCTCAGCGGCGTaGTTGACCTCGTTTTTGTTTGAATCCAGTCCTTTGGCGGCATTC | + |
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Preference number: 1 (lower is better) Translates to: LGGQCYTDVVTRSAA*LTSFLFESSPLAAF Trigger: GAATGCCGCCAAAGGACTGGATTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCGCGTGACCACATCGGTGTAGCATTGACCTCCGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR TCA 90 bp | GAGGTCAATGCTACACCGATGTGGTCACGCGCTCAGCGGCGTGGTTaGCCTCGTTTTTGTTTGAATCCAGTCCTTTGGCGGCATTCATGT | + |
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Preference number: 1 (lower is better) Translates to: EVNATPMWSRAQRRG*PRFCLNPVLWRHSC Trigger: ACATGAATGCCGCCAAAGGACTGGATTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCGCGTGACCACATCGGTGTAGCATTGACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR GCA 90 bp | GAATTTCTGGACCAGTTGTTTTTCTCTCTGTGCTTTTCTGCTGTGTaGTGTTACCCAGGTGGCCCATGCCTCTGGAGCAGGCACAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: EFLDQLFFSLCFSAV*CYPGGPCLWSRHSL Trigger: CAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCACAGAGAGAAAAACAACTGGTCCAGAAATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR GCA 90 bp | AGTCATGGATCCACTGAATTTCTGGACCAGTTGTTTTTCTCTCTGTaGTTTTCTGCTGTGTGCTGTTACCCAGGTGGCCCATGCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SHGSTEFLDQLFFSL*FSAVCCYPGGPCLW Trigger: CCAGAGGCATGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCACAGAGAGAAAAACAACTGGTCCAGAAATTCAGTGGATCCATGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR GCA 90 bp | CGTTTCGTTTTCATCTTCGTCCTTCTCGTCTTCCAAAAACCGGATTaGACTAACTCTGTGGACCGAGCGGTCATTCCAGGCTTCCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: RFVFIFVLLVFQKPD*TNSVDRAVIPGFLR Trigger: TCTGAGGAAGCCTGGAATGACCGCTCGGTCCACAGAGTTAGTGCAATCCGGTTTTTGGAAGACGAGAAGGACGAAGATGAAAACGAAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR CCA 90 bp | CCCAAACAGCACAGACATCTTCCCCTCAGTCATTTGGGGAACAGATaGAAATGCATGCGGCTGAAGAGGAAGGAGACTGACAATATACAA | + |
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Preference number: 1 (lower is better) Translates to: PKQHRHLPLSHLGNR*KCMRLKRKETDNIQ Trigger: TTGTATATTGTCAGTCTCCTTCCTCTTCAGCCGCATGCATTTCCATCTGTTCCCCAAATGACTGAGGGGAAGATGTCTGTGCTGTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
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| 3UTR TCA 90 bp | TTCGGCAACAGTCATTCTTCTGTGACACGTAAGTCATGGATCCACTaGATTTCTGGACCAGTTGTTTTTCTCTCTGTGCTTTTCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: FGNSHSSVTRKSWIH*ISGPVVFLSVLFCC Trigger: ACAGCAGAAAAGCACAGAGAGAAAAACAACTGGTCCAGAAATTCAGTGGATCCATGACTTACGTGTCACAGAAGAATGACTGTTGCCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR TCA 90 bp | TTTACTACAAATAACACAATGAAACACAAACAGGACCCTTTACTGTaGCCCAAACAGCACAGACATCTTCCCCTCAGTCATTTGGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: FTTNNTMKHKQDPLL*PKQHRHLPLSHLGN Trigger: GTTCCCCAAATGACTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGTTTCATTGTGTTATTTGTAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
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| 3UTR TCA 90 bp | GGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCTGTaGCACGTAAGTCATGGATCCACTGAATTTCTGGACCAGTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: GYRIFKLPSATVILL*HVSHGSTEFLDQLF Trigger: AAACAACTGGTCCAGAAATTCAGTGGATCCATGACTTACGTGTCACAGAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | CACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAGCCGCTGTGCAAGAGCAGCATCCTaGCAGAGGGATGGTGGACGC | + |
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Preference number: 2 (lower is better) Translates to: HTQAPILLLKDATVCSRCARAAS*QRDGGR Trigger: GCGTCCACCATCCCTCTGCCAGGATGCTGCTCTTGC...ACAGCGGCTGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTGGCCCATGCCTCTGGAGCAGGCACAGCCTGATGCTGCACACACCCGAGCTCTCTGTGCTTTTCTaGTGTGTGCTGTTACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PGGPCLWSRHSLMLHTPELSVLF*CVLLPR Trigger: CCTGGGTAACAGCACACAGCAGAAAAGCACAGAGAG...CTCGGGTGTGTGCAGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | AACTTGGGTTCCGAATGTCCAGCACTCAGTGGAGGGAAGAGGGTCAGAACCCCCCCCCTGGGTGTGGAGTaGCTCGCCTCTGAAGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: NLGSECPALSGGKRVRTPPLGVE*LASEVF Trigger: GAACACTTCAGAGGCGAGCCACTCCACACCCAGGGG...GGGGGTTCTGACCCTCTTCCCTCCACTGAGTGCTGGACATTCGGAACCCAAGTT 59% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAGCAAGAGCAGCATCCTaGCAGAGGGATGGTGGACGC | + |
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Preference number: 2 (lower is better) Translates to: NKTTPRRPSCCSRMPLFAARAAS*QRDGGR Trigger: GCGTCCACCATCCCTCTGCCAGGATGCTGCTCTTGC...TGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR GCA 90 bp | AACTTGGGTTCCGAATGTCCAGCACTCAGTGGAGGGAAGAGGGTCAGAACCCCCAGGAGGCTCCTCAGGTaGACAGGAACATCTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: NLGSECPALSGGKRVRTPRRLLR*TGTSLQ Trigger: CTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCT...GGGGGTTCTGACCCTCTTCCCTCCACTGAGTGCTGGACATTCGGAACCCAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGGACGGGAGGCTACTGGTACGCGGATGGACTGAGGGATGCAGAAGGCACTGATGCAGAAGGCACTTaGTGCAAGAGCAGCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: IRTGGYWYADGLRDAEGTDAEGT*CKSSIL Trigger: CAGGATGCTGCTCTTGCACCAAGTGCCTTCTGCATC...AGTGCCTTCTGCATCCCTCAGTCCATCCGCGTACCAGTAGCCTCCCGTCCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAAGACACAGGATGCAGAAGGCACTTaGTGCAAGAGCAGCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: RQEAPQVHRNISTAGKTQDAEGT*CKSSIL Trigger: CAGGATGCTGCTCTTGCACCAAGTGCCTTCTGCATC...CTGTGTCTTCCCTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR CAA 90 bp | GGAGGTCAATGCTACACCGATGTGGTCACGCGCTCAGCGGCGTGGTaGACCTCGTTTTTGTTTGAATCCAGTCCTTTGGCGGCATTCATG | + |
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Preference number: 2 (lower is better) Translates to: GGQCYTDVVTRSAAW*TSFLFESSPLAAFM Trigger: CATGAATGCCGCCAAAGGACTGGATTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCGCGTGACCACATCGGTGTAGCATTGACCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR-3UTR GCA 90 bp | AGGATGCCACTGTTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAAGGAGGCTCCTCAGGTaGACAGGAACATCTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: RMPLFAAAVTGQDTVRHGRRLLR*TGTSLQ Trigger: CTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCT...TCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAACAGTGGCATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTGGCCCATGCCTCTGGAGCAGGCACAGCCTGATGCTGCACACACCCGAGATAAATTCATCGTTCTaGTTAACAAACAAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PGGPCLWSRHSLMLHTPEINSSF*LTNKPA Trigger: TGCTGGCTTGTTTGTTAACCAGAACGATGAATTTAT...CTCGGGTGTGTGCAGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTATGTCCAGCACTCAGTaGAGGGAAGAGGGTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: FNKTTPRRPSCCSRMPLFMSSTQ*REEGQN Trigger: GTTCTGACCCTCTTCCCTCCACTGAGTGCTGGACAT...AAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | AGGATGCCACTGTTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGATTGAATCCAGTCCTTTaGCGGCATTCATGTCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RMPLFAAAVTGQDTVRHGLNPVL*RHSCRS Trigger: GGAACGACATGAATGCCGCCAAAGGACTGGATTCAA...TCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAACAGTGGCATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR CAA 90 bp | CGCTCAGCGGCGTGGTTGACCTCGTTTTTGTTTGAATCCAGTCCTTaGGCGGCATTCATGTCGTTCCGTAAATTCTCCACCGTCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: RSAAWLTSFLFESSP*AAFMSFRKFSTVFF Trigger: GAAAAAGACGGTGGAGAATTTACGGAACGACATGAATGCCGCCAAAGGACTGGATTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGCTTTTCTGCTGTGTGCTGTTACCCAGGTGGCCCATGCCTCTGGAGCAGGATCCACTGAATTTCTaGACCAGTTGTTTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SVLFCCVLLPRWPMPLEQDPLNF*TSCFSL Trigger: GAGAGAAAAACAACTGGTCCAGAAATTCAGTGGATC...CTGCTCCAGAGGCATGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTAACCCCAACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGAGGAGGCTCCTCAGGTaGACAGGAACATCTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: LSLTPTQDKNEGQVLTVVRRLLR*TGTSLQ Trigger: CTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCT...CACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTTGGGGTTAGAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAGTGGATGGTACAGCGAGGCTAATCCTTTaGTTCATCTTGTCGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: FAAAVTGQDTVRHGVDGTARLIL*FILSKK Trigger: TTTCTTCGACAAGATGAACCAAAGGATTAGCCTCGC...TGTACCATCCACTCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCTGCACACACCCGAGCTaGGTCAGGACGAGGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: VFYLDIEFLSFLRQQSFFCTHPS*VRTRGS Trigger: GCTCCCCCTCGTCCTGACTCAGCTCGGGTGTGTGCA...GAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCTACCCAGGTGGCCCATaGCTCTGGAGCAGGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: VFYLDIEFLSFLRQQSFFYPGGP*LWSRHS Trigger: GCTGTGCCTGCTCCAGAGGCATGGGCCACCTGGGTA...GAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | CGAAGGTCAGGTGTTGACAGTAGTGTATTCTACTTATTAGGAACAACTGATATTGCAAGAGCAGCATCCTaGCAGAGGGATGGTGGACGC | + |
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Preference number: 2 (lower is better) Translates to: RRSGVDSSVFYLLGTTDIARAAS*QRDGGR Trigger: GCGTCCACCATCCCTCTGCCAGGATGCTGCTCTTGC...AATATCAGTTGTTCCTAATAAGTAGAATACACTACTGTCAACACCTGACCTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | GTAAGGCACGGAGTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGATGTCCAGCACTCAGTaGAGGGAAGAGGGTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: VRHGVDGTGKNQYFRPNLMSSTQ*REEGQN Trigger: GTTCTGACCCTCTTCCCTCCACTGAGTGCTGGACAT...CAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCACTCCGTGCCTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCTGGGTGGCCCATGCCTCTaGAGCAGGCACAGCCTGATG | + |
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Preference number: 2 (lower is better) Translates to: LLSGYRIFKLPSATVILLGGPCL*SRHSLM Trigger: CATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACC...CAGAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGTCAGATCATTTCTTATaGGTACCAAGCTGTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQSDHFL*VPSCDP Trigger: TGGGTCACAGCTTGGTACCCATAAGAAATGATCTGA...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGTATTCTACTTAGGAGTGGCTCGCCTCTaGAGTGTTCTCGTTTCGTTT | + |
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Preference number: 2 (lower is better) Translates to: PNTRQKRRSGVDSSVFYLGVARL*SVLVSF Trigger: AAACGAAACGAGAACACTTCAGAGGCGAGCCACTCC...TAAGTAGAATACACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCGTGCTGTTACCCAGGTaGCCCATGCCTCTGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VFYLDIEFLSFLRQQSFFVLLPR*PMPLEQ Trigger: CTGCTCCAGAGGCATGGGCCACCTGGGTAACAGCAC...GAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR CCA 72 bp | ACTTGGTGCAAGAGCAGCATCCTGGCAGAGGGATGGTaGACGCAAGGACGGCAGGCAGGAGGCTCCTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: TWCKSSILAEGW*TQGRQAGGSSG Trigger: ACCTGAGGAGCCTCCTGCCTGCCGTCCTTGCGTCCACCATCCCTCTGCCAGGATGCTGCTCTTGCACCAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR CCA 72 bp | TGGTACGCGGATGGACTGAGGGATGCAGAAGGCACTTaGTGCAAGAGCAGCATCCTGGCAGAGGGATGGTGG | + |
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Preference number: 3 (lower is better) Translates to: WYADGLRDAEGT*CKSSILAEGWW Trigger: CCACCATCCCTCTGCCAGGATGCTGCTCTTGCACCAAGTGCCTTCTGCATCCCTCAGTCCATCCGCGTACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR CCA 72 bp | CTCTCTGTGCTTTTCTGCTGTGTGCTGTTACCCAGGTaGCCCATGCCTCTGGAGCAGGCACAGCCTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: LSVLFCCVLLPR*PMPLEQAQPDA Trigger: AGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCACAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR TCA 72 bp | GCTACACCGATGTGGTCACGCGCTCAGCGGCGTGGTTaGCCTCGTTTTTGTTTGAATCCAGTCCTTTGGCGG | + |
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Preference number: 3 (lower is better) Translates to: ATPMWSRAQRRG*PRFCLNPVLWR Trigger: CCGCCAAAGGACTGGATTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCGCGTGACCACATCGGTGTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
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| 3UTR GCA 72 bp | CAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTaGAGCCGCTGTGACAGGACAGGATACAGTAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QAPILLLKDATV*SRCDRTGYSKA Trigger: TGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGATGCCACTGTTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGGGATGCAGAAGGCACTaGGTGCAAGAGCAGCATCCT | + |
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Preference number: 3 (lower is better) Translates to: KDATVCSRCDRTGYSKARGCRRH*VQEQHP Trigger: AGGATGCTGCTCTTGCACCAAGTGCCTTCTGCATCC...CCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAACAGTGGCATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR GCA 72 bp | CGATTTAACAAGACCACACCCAGGCGCCCATCTTGCTaGTCAAGGATGCCACTGTTTGCAGCCGCTGTGACA | + |
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Preference number: 3 (lower is better) Translates to: RFNKTTPRRPSC*SRMPLFAAAVT Trigger: TGTCACAGCGGCTGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| 3UTR-3UTR CAA 90 bp | CACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAGCCGCTGTTGGTTGACCTCGTTTTaGTTTGAATCCAGTCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HTQAPILLLKDATVCSRCWLTSF*FESSPL Trigger: CAAAGGACTGGATTCAAACAAAAACGAGGTCAACCA...ACAGCGGCTGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| 3UTR CCA 72 bp | CAATGCTACACCGATGTGGTCACGCGCTCAGCGGCGTaGTTGACCTCGTTTTTGTTTGAATCCAGTCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QCYTDVVTRSAA*LTSFLFESSPL Trigger: CAAAGGACTGGATTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCGCGTGACCACATCGGTGTAGCATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAAGACACAGAACGAAGGTCAGGTGTaGACAGTAGTGTATTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: RQEAPQVHRNISTAGKTQNEGQV*TVVYST Trigger: AGTAGAATACACTACTGTCAACACCTGACCTTCGTT...CTGTGTCTTCCCTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR CCA 72 bp | CAACTGATATTGAACAGAATTAGGACGGGAGGCTACTaGTACGCGGATGGACTGAGGGATGCAGAAGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: QLILNRIRTGGY*YADGLRDAEGT Trigger: AGTGCCTTCTGCATCCCTCAGTCCATCCGCGTACCAGTAGCCTCCCGTCCTAATTCTGTTCAATATCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR CCA 72 bp | AGCTTTCTCTCTCTCCTCCGTAGGTCCATAAGAACTTaGGTTCCGAATGTCCAGCACTCAGTGGAGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SFLSLLRRSIRT*VPNVQHSVEGR Trigger: TCTTCCCTCCACTGAGTGCTGGACATTCGGAACCCAAGTTCTTATGGACCTACGGAGGAGAGAGAGAAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR CCA 72 bp | CACAGACATCTTCCCCTCAGTCATTTGGGGAACAGATaGAAATGCATGCGGCTGAAGAGGAAGGAGACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: HRHLPLSHLGNR*KCMRLKRKETD Trigger: GTCAGTCTCCTTCCTCTTCAGCCGCATGCATTTCCATCTGTTCCCCAAATGACTGAGGGGAAGATGTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| 3UTR CCA 72 bp | TTCTCGTCTTCCAAAAACCGGATTGCACTAACTCTGTaGACCGAGCGGTCATTCCAGGCTTCCTCAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: FSSSKNRIALTL*TERSFQASSDM Trigger: CATGTCTGAGGAAGCCTGGAATGACCGCTCGGTCCACAGAGTTAGTGCAATCCGGTTTTTGGAAGACGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTCTAACCCCAACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGGGATGCAGAAGGCACTaGGTGCAAGAGCAGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSLTPTQDKNEGQVLTVVGCRRH*VQEQHP Trigger: AGGATGCTGCTCTTGCACCAAGTGCCTTCTGCATCC...CACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTTGGGGTTAGAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAGTGGATGGTACAAACGAAGGTCAGGTGTaGACAGTAGTGTATTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: FAAAVTGQDTVRHGVDGTNEGQV*TVVYST Trigger: AGTAGAATACACTACTGTCAACACCTGACCTTCGTT...TGTACCATCCACTCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR TCA 72 bp | TTCTTTAATTCCCCTGGGTGTGGAGTGGCTCGCCTCTaGAGTGTTCTCGTTTCGTTTTCATCTTCGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FFNSPGCGVARL*SVLVSFSSSSF Trigger: GAAGGACGAAGATGAAAACGAAACGAGAACACTTCAGAGGCGAGCCACTCCACACCCAGGGGAATTAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| 3UTR GCA 72 bp | TCCACTGAATTTCTGGACCAGTTGTTTTTCTCTCTGTaGTTTTCTGCTGTGTGCTGTTACCCAGGTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: STEFLDQLFFSL*FSAVCCYPGGP Trigger: TGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCACAGAGAGAAAAACAACTGGTCCAGAAATTCAGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR GCA 72 bp | GTTAACAAACAAGCCAGCAGATTACCGATTAAAATGTaGGACACCGATTTAACAAGACCACACCCAGGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: VNKQASRLPIKM*DTDLTRPHPGA Trigger: GGCGCCTGGGTGTGGTCTTGTTAAATCGGTGTCGCACATTTTAATCGGTAATCTGCTGGCTTGTTTGTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR TCA 72 bp | AATAACACAATGAAACACAAACAGGACCCTTTACTGTaGCCCAAACAGCACAGACATCTTCCCCTCAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: NNTMKHKQDPLL*PKQHRHLPLSH Trigger: ATGACTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGTTTCATTGTGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| 3UTR-3UTR CAA 90 bp | CACGGAGTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGTTTTTCTTTGAATCCAGTCCTTaGGCGGCATTCATGTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HGVDGTGKNQYFRPNLFFFESSP*AAFMSF Trigger: GAACGACATGAATGCCGCCAAAGGACTGGATTCAAA...GAAAAACAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCACTCCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCTGCGCTCAGCGGCGTGGTaGACCTCGTTTTTGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLSGYRIFKLPSATVILLRSAAW*TSFLFE Trigger: TTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCG...CAGAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| 3UTR TCA 72 bp | AGTCATTCTTCTGTGACACGTAAGTCATGGATCCACTaGATTTCTGGACCAGTTGTTTTTCTCTCTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SHSSVTRKSWIH*ISGPVVFLSVL Trigger: AAGCACAGAGAGAAAAACAACTGGTCCAGAAATTCAGTGGATCCATGACTTACGTGTCACAGAAGAATGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR TCA 72 bp | ATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCTGTaGCACGTAAGTCATGGATCCACTGAATTTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IFKLPSATVILL*HVSHGSTEFLD Trigger: GTCCAGAAATTCAGTGGATCCATGACTTACGTGTCACAGAAGAATGACTGTTGCCGAAGGAAGCTTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR TCA 72 bp | CAGATGGAAATGCATGCGGCTGAAGAGGAAGGAGACTaGCAATATACAATACCATCAAATGAGATGACAACA | + |
|
Preference number: 3 (lower is better) Translates to: QMEMHAAEEEGD*QYTIPSNEMTT Trigger: TGTTGTCATCTCATTTGATGGTATTGTATATTGTCAGTCTCCTTCCTCTTCAGCCGCATGCATTTCCATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGTTTTTCTGCACAAACGAAGGTCAGGTGTaGACAGTAGTGTATTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: VDGTGKNQYFRPNLFFCTNEGQV*TVVYST Trigger: AGTAGAATACACTACTGTCAACACCTGACCTTCGTT...TGTGCAGAAAAACAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGTGGCCCATGCCTCTGGAGCAGGCACAGCCTGATGCTGCACACACCCGAGTGTCTGTCTGGAACGTaGGGAGAGGCTGCGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGGPCLWSRHSLMLHTPECLSGT*GEAATG Trigger: ACCAGTCGCAGCCTCTCCTCACGTTCCAGACAGACA...CTCGGGTGTGTGCAGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAAGACACAGCAGGGGAGCTCCCGGAGCTaGTTGGCGTCCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEAPQVHRNISTAGKTQQGSSRS*LASSSS Trigger: GCTGCTGCTGGACGCCAACCAGCTCCGGGAGCTCCC...CTGCTGTGTCTTCCCTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | GACGGGAGGCTACTGGTACGCGGATGGACTGAGGGATGCAGAAGGCACTTGGTGCGCGGCAGGCTCTCTTaGCAGATGGGTTCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DGRLLVRGWTEGCRRHLVRGRLS*QMGSEG Trigger: GCCTTCTGAACCCATCTGCCAAGAGAGCCTGCCGCG...CACCAAGTGCCTTCTGCATCCCTCAGTCCATCCGCGTACCAGTAGCCTCCCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | GTGGACGCAAGGACGGCAGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTATGTCTGTCTGGAACGTaGGGAGAGGCTGCGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VDARTAGRRLLRCTGTSLCLSGT*GEAATG Trigger: ACCAGTCGCAGCCTCTCCTCACGTTCCAGACAGACA...TAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCTGCCGTCCTTGCGTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGACGGCAGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAGTGGCTCGCCTCTaGAGTGTTCTCGTTTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARTAGRRLLRCTGTSLQQGVARL*SVLVSF Trigger: AAACGAAACGAGAACACTTCAGAGGCGAGCCACTCC...CTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCTGCCGTCCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | GACGGGAGGCTACTGGTACGCGGATGGACTGAGGGATGCAGAAGGCACTTGGTGAGGAGAGGCTGCGACTaGTTGTCAGATAACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DGRLLVRGWTEGCRRHLVRRGCD*LSDNHR Trigger: CCTGTGGTTATCTGACAACCAGTCGCAGCCTCTCCT...CACCAAGTGCCTTCTGCATCCCTCAGTCCATCCGCGTACCAGTAGCCTCCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | GTGGACGCAAGGACGGCAGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTAGGCTCTCTTGGCAGATaGGTTCAGAAGGCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VDARTAGRRLLRCTGTSLGSLGR*VQKASE Trigger: CTCAGATGCCTTCTGAACCCATCTGCCAAGAGAGCC...TAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCTGCCGTCCTTGCGTCCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGGGTTCCGAATGTCCAGCACTCAGTGGAGGGAAGAGGGTCAGAACCCCCAGTGGCGCTTGTCGATaGCCTCCACATGACGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLGSECPALSGGKRVRTPSGACR*PPHDGC Trigger: GCAACCGTCATGTGGAGGCCATCGACAAGCGCCACT...GGGGGTTCTGACCCTCTTCCCTCCACTGAGTGCTGGACATTCGGAACCCAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | TGCTACACCGATGTGGTCACGCGCTCAGCGGCGTGGTTGACCTCGTTTTTGTTTTGTCTGTCTGGAACGTaGGGAGAGGCTGCGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CYTDVVTRSAAWLTSFLFCLSGT*GEAATG Trigger: ACCAGTCGCAGCCTCTCCTCACGTTCCAGACAGACA...AAACAAAAACGAGGTCAACCACGCCGCTGAGCGCGTGACCACATCGGTGTAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| CDS-3UTR GCA 90 bp | CGCAAGGACGGCAGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAAACGTGAGGAGAGGCTaGGACTGGTTGTCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKDGRQEAPQVHRNISTANVRRG*DWLSDN Trigger: GTTATCTGACAACCAGTCGCAGCCTCTCCTCACGTT...TGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCTGCCGTCCTTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAAGACACAGCAAGGCAACCTGGTGAGTaGGTTTCCGCTGAAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGGSSGAQEHLYSREDTARQPGE*VSAEVS Trigger: GCTGACTTCAGCGGAAACCCACTCACCAGGTTGCCT...TGCTGTGTCTTCCCTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | TGTTACCCAGGTGGCCCATGCCTCTGGAGCAGGCACAGCCTGATGCTGCACACACCTTCAACTTCAGGGTaGTCAGCGATAAGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CYPGGPCLWSRHSLMLHTPSTSG*SAIRAD Trigger: ATCTGCCCTTATCGCTGACCACCCTGAAGTTGAAGG...TGTGTGCAGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGGGTAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | CATAAGGTGCTTCAGGCCACTCTCTCATCAGAAACACTGCTGGAGATTCACTCTGGGAGCTCCCGGAGCTaGTTGGCGTCCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKVLQATLSSETLLEIHSGSSRS*LASSSS Trigger: GCTGCTGCTGGACGCCAACCAGCTCCGGGAGCTCCC...AGAGTGAATCTCCAGCAGTGTTTCTGATGAGAGAGTGGCCTGAAGCACCTTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGTGGCCCATGCCTCTGGAGCAGGCACAGCCTGATGCTGCACACACCCGAGGCAAGTTCTGGGAAATaGCTAAGTATGTCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGPCLWSRHSLMLHTPEASSGK*LSMSKK Trigger: CTTCTTTGACATACTTAGTCATTTCCCAGAACTTGC...CTCGGGTGTGTGCAGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAAGACACAGCAAGGAGAGGCTGCGACTaGTTGTCAGATAACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGSSGAQEHLYSREDTARRGCD*LSDNHR Trigger: CCTGTGGTTATCTGACAACCAGTCGCAGCCTCTCCT...TGCTGTGTCTTCCCTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| 3UTR CAA 72 bp | TGCTACACCGATGTGGTCACGCGCTCAGCGGCGTGGTaGACCTCGTTTTTGTTTGAATCCAGTCCTTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CYTDVVTRSAAW*TSFLFESSPLA Trigger: CGCCAAAGGACTGGATTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCGCGTGACCACATCGGTGTAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| CDS-3UTR CCA 90 bp | CGCAAGGACGGCAGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGAAGTTTGCTATTTCTaGAGGGAGCCGCTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKDGRQEAPQVHRNISTAEVCYF*REPLNF Trigger: GAAATTCAGCGGCTCCCTCCAGAAATAGCAAACTTC...TGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCTGCCGTCCTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAAGACACAGCAGGTTCCACGAGCTGCATaGAGTTTGCTATTTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QEAPQVHRNISTAGKTQQVPRAA*SLLFLE Trigger: CTCCAGAAATAGCAAACTTCATGCAGCTCGTGGAAC...CTGCTGTGTCTTCCCTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAAAGAAGTCAGGCCGCTaGTCTCTTCAGGAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTTPRRPSCCSRMPLFAKKSGR*SLQEVS Trigger: AGAGACTTCCTGAAGAGATCAGCGGCCTGACTTCTT...TGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGACGGCAGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGTGTGTGAGTCTGTTCTaGTCCAACTTCAAGATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARTAGRRLLRCTGTSLQQCVSLF*SNFKID Trigger: GTCAATCTTGAAGTTGGATCAGAACAGACTCACACA...CTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCTGCCGTCCTTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | GGGAACAGATGGAAATGCATGCGGCTGAAGAGGAAGGAGACTGACAATATACAATCGATGGCCTCCACATaGCGGTTGCACCGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNRWKCMRLKRKETDNIQSMAST*RLHRHR Trigger: CCTGTGGCGGTGCAACCGTCATGTGGAGGCCATCGA...TTGTATATTGTCAGTCTCCTTCCTCTTCAGCCGCATGCATTTCCATCTGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAAACGTGAGGAGAGGCTaGGACTGGTTGTCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKTTPRRPSCCSRMPLFANVRRG*DWLSDN Trigger: GTTATCTGACAACCAGTCGCAGCCTCTCCTCACGTT...TGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | GATGCCACTGTTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAGTCCTTCAACTTCAGGGTaGTCAGCGATAAGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DATVCSRCDRTGYSKARSPSTSG*SAIRAD Trigger: ATCTGCCCTTATCGCTGACCACCCTGAAGTTGAAGG...ACTCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAACAGTGGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGGGTTCCGAATGTCCAGCACTCAGTGGAGGGAAGAGGGTCAGAACCCCCTTGAATCCAGTCCTTTaGCGGCATTCATGTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLGSECPALSGGKRVRTPLNPVL*RHSCRS Trigger: GGAACGACATGAATGCCGCCAAAGGACTGGATTCAA...GGGGGTTCTGACCCTCTTCCCTCCACTGAGTGCTGGACATTCGGAACCCAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGTCATTTGGGGAACAGATGAGTGGCGCTTGTCGATaGCCTCCACATGACGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVTQTAQTSSPQSFGEQMSGACR*PPHDGC Trigger: GCAACCGTCATGTGGAGGCCATCGACAAGCGCCACT...CATCTGTTCCCCAAATGACTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAGTTCCACGAGCTGCATaGAGTTTGCTATTTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTTPRRPSCCSRMPLFAVPRAA*SLLFLE Trigger: CTCCAGAAATAGCAAACTTCATGCAGCTCGTGGAAC...TGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAGTGGATGGTACAAAGAAGTCAGGCCGCTaGTCTCTTCAGGAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FAAAVTGQDTVRHGVDGTKKSGR*SLQEVS Trigger: AGAGACTTCCTGAAGAGATCAGCGGCCTGACTTCTT...TGTACCATCCACTCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | AGGATGCCACTGTTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGATTCACAATCCCCAATTaGTTCGGGCAACTGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RMPLFAAAVTGQDTVRHGFTIPN*FGQLCE Trigger: CTCACACAGTTGCCCGAAGCAATTGGGGATTGTGAA...TCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAACAGTGGCATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGGTCAGAACCCCCTTCCTGCTCTCTCTAACCCCAACACAAGACAAAAAAGGCAACCTGGTGAGTaGGTTTCCGCTGAAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEGQNPLPALSNPNTRQKRQPGE*VSAEVS Trigger: GCTGACTTCAGCGGAAACCCACTCACCAGGTTGCCT...TTTTTGTCTTGTGTTGGGGTTAGAGAGAGCAGGAAGGGGGTTCTGACCCTCTTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGAGGCAACCTGGTGAGTaGGTTTCCGCTGAAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQRQPGE*VSAEVS Trigger: GCTGACTTCAGCGGAAACCCACTCACCAGGTTGCCT...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAAGACACAGCGTAATTTGACTAGCTaGAAAAATTGCTCGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQEAPQVHRNISTAGKTQRNLTS*KNCSGS Trigger: GCTCCCCGAGCAATTTTTCCAGCTAGTCAAATTACG...CTGTGTCTTCCCTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | TTTAACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTCTTCGGGCAACTGTGTaGGTCTGTTCTGATCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FNKTTPRRPSCCSRMPLFLRATV*VCSDPT Trigger: AGTTGGATCAGAACAGACTCACACAGTTGCCCGAAG...AAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGCGACACCGATTTAACAAGACCACACCCAGGCGCCCATCTTGCTGCTCATTCACAATCCCCAATTaGTTCGGGCAACTGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVRHRFNKTTPRRPSCCSFTIPN*FGQLCE Trigger: CTCACACAGTTGCCCGAAGCAATTGGGGATTGTGAA...TGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAATCGGTGTCGCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCTTTTCTGCTGTGTGCTGTTACCCAGGTGGCCCATGCCTCTGGAGCAGATTTCCAATATTCTCTaGCAGAGACTGCAGCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLFCCVLLPRWPMPLEQISNIL*QRLQRD Trigger: ATCTCGCTGCAGTCTCTGCCAGAGAATATTGGAAAT...CTGCTCCAGAGGCATGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAGTGGATGGTACAGGTAATTCAGACAGCTaGTTTCCATCCAACCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FAAAVTGQDTVRHGVDGTGNSDS*FPSNQR Trigger: TCTCTGGTTGGATGGAAATCAGCTGTCTGAATTACC...TGTACCATCCACTCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGGACGGCAGGCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGTCTTTAGTTTTCCAATaGCCTCAGGAATTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ARTAGRRLLRCTGTSLQQSLVFQ*PQELFL Trigger: TAGAAACAATTCCTGAGGGCATTGGAAAACTAAAGA...CTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGCCTGCCGTCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | TACAGCAGGGAAGACACAGCAGGTAAAACTCGGAGGTCAATGCTACACCGATGTAACGTGAGGAGAGGCTaGGACTGGTTGTCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSREDTAGKTRRSMLHRCNVRRG*DWLSDN Trigger: GTTATCTGACAACCAGTCGCAGCCTCTCCTCACGTT...ACATCGGTGTAGCATTGACCTCCGAGTTTTACCTGCTGTGTCTTCCCTGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCTTTTCTGCTGTGTGCTGTTACCCAGGTGGCCCATGCCTCTGGAGCAGCGTAATTTGACTAGCTaGAAAAATTGTTTCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLFCCVLLPRWPMPLEQRNLTS*KNCFAL Trigger: CAGCGCGAAACAATTTTTCCAGCTAGTCAAATTACG...CTGCTCCAGAGGCATGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113421.10 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCACGGAGTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGCCCCTGGGTGTGGAGTaGCTCGCCTCTGAAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRHGVDGTGKNQYFRPNLPLGVE*LASEVF Trigger: GAACACTTCAGAGGCGAGCCACTCCACACCCAGGGG...CAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCACTCCGTGCCTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAGAATTTCATTATCACTaGGCCCAAGCTTCCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: NKTTPRRPSCCSRMPLFAEFHYH*AQASVI Trigger: AATTACGGAAGCTTGGGCTCAGTGATAATGAAATTC...TGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | CATAAGGTGCTTCAGGCCACTCTCTCATCAGAAACACTGCTGGAGATTCACTCTAAGAAGTCAGGCCGCTaGTCTCTTCAGGAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKVLQATLSSETLLEIHSKKSGR*SLQEVS Trigger: AGAGACTTCCTGAAGAGATCAGCGGCCTGACTTCTT...AGAGTGAATCTCCAGCAGTGTTTCTGATGAGAGAGTGGCCTGAAGCACCTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAGCAAGTTCTGGGAAATaGCTAAGTATGTCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTTPRRPSCCSRMPLFAASSGK*LSMSKK Trigger: CTTCTTTGACATACTTAGTCATTTCCCAGAACTTGC...TGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | GATGCCACTGTTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAGTCAAGCTTCCGTAATTTaGCTAGCTGGAAAAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DATVCSRCDRTGYSKARSQASVI*LAGKIA Trigger: AGCAATTTTTCCAGCTAGTCAAATTACGGAAGCTTG...ACTCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAACAGTGGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | GGGAACAGATGGAAATGCATGCGGCTGAAGAGGAAGGAGACTGACAATATACAACTGAAGTCAGCTACCTaGAGCGCTTTACAGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GNRWKCMRLKRKETDNIQLKSAT*SALQKA Trigger: CGCCTTCTGTAAAGCGCTGCAGGTAGCTGACTTCAG...TTGTATATTGTCAGTCTCCTTCCTCTTCAGCCGCATGCATTTCCATCTGTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGGTCAGAACCCCCTTCCTGCTCTCTCTAACCCCAACACAAGACAAAAATTGAATCCAGTCCTTTaGCGGCATTCATGTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEGQNPLPALSNPNTRQKLNPVL*RHSCRS Trigger: GGAACGACATGAATGCCGCCAAAGGACTGGATTCAA...TTTTTGTCTTGTGTTGGGGTTAGAGAGAGCAGGAAGGGGGTTCTGACCCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| 3UTR CAA 72 bp | GCGTGGTTGACCTCGTTTTTGTTTGAATCCAGTCCTTaGGCGGCATTCATGTCGTTCCGTAAATTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AWLTSFLFESSP*AAFMSFRKFST Trigger: GGTGGAGAATTTACGGAACGACATGAATGCCGCCAAAGGACTGGATTCAAACAAAAACGAGGTCAACCACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCACAAGCTTCCGTAATTTaGCTAGCTGGAAAAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKTTPRRPSCCSRMPLFAQASVI*LAGKIV Trigger: AACAATTTTTCCAGCTAGTCAAATTACGGAAGCTTG...TGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113421.10 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGCCGCTGTGACAGGACAGGATACAGTAAGGCACGGAGTGGATGGTACAGAATTTCATTATCACTaGGCCCAAGCTTCCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: FAAAVTGQDTVRHGVDGTEFHYH*AQASVI Trigger: AATTACGGAAGCTTGGGCTCAGTGATAATGAAATTC...TGTACCATCCACTCCGTGCCTTACTGTATCCTGTCCTGTCACAGCGGCTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTAGAGCTAGTGTTCATGCACACACAATCACAGGGCAGACCACACTAACTGTTCCACGAGCTGCATaGAGTTTGCTATTTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGRASVHAHTITGQTTLTVPRAA*SLLFLE Trigger: CTCCAGAAATAGCAAACTTCATGCAGCTCGTGGAAC...AGTTAGTGTGGTCTGCCCTGTGATTGTGTGTGCATGAACACTAGCTCTACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACAGATGGAAATGCATGCGGCTGAAGAGGAAGGAGACTGACAATATACAACTTCGGGCAACTGTGTaGGTCTGTTCTGATCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GNRWKCMRLKRKETDNIQLRATV*VCSDPT Trigger: AGTTGGATCAGAACAGACTCACACAGTTGCCCGAAG...TTGTATATTGTCAGTCTCCTTCCTCTTCAGCCGCATGCATTTCCATCTGTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTAACCCCAACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGCTTCGGGCAACTGTGTaGGTCTGTTCTGATCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTPTQDKNEGQVLTVVLRATV*VCSDPT Trigger: AGTTGGATCAGAACAGACTCACACAGTTGCCCGAAG...CACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTTGGGGTTAGAGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGTCTACAGACCTTGCCTaGAATGTGTTCCTCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQSTDLA*NVFLFW Trigger: CCAAAAGAGGAACACATTTCAGGCAAGGTCTGTAGA...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR GCA 90 bp | AACTTGGGTTCCGAATGTCCAGCACTCAGTGGAGGGAAGAGGGTCAGAACCCCCTCTTTAGTTTTCCAATaGCCTCAGGAATTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NLGSECPALSGGKRVRTPSLVFQ*PQELFL Trigger: TAGAAACAATTCCTGAGGGCATTGGAAAACTAAAGA...GGGGGTTCTGACCCTCTTCCCTCCACTGAGTGCTGGACATTCGGAACCCAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGTAGAGCTAGTGTTCATGCACACACAATCACAGGGCAGACCACACTAACTTTCACAATCCCCAATTaGTTCGGGCAACTGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGRASVHAHTITGQTTLTFTIPN*FGQLCE Trigger: CTCACACAGTTGCCCGAAGCAATTGGGGATTGTGAA...AGTTAGTGTGGTCTGCCCTGTGATTGTGTGTGCATGAACACTAGCTCTACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR CCA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGGAAGTTTGCTATTTCTaGAGGGAGCCGCTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQEVCYF*REPLNF Trigger: GAAATTCAGCGGCTCCCTCCAGAAATAGCAAACTTC...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR CCA 90 bp | TTTAACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTATTTCCAATATTCTCTaGCAGAGACTGCAGCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FNKTTPRRPSCCSRMPLFISNIL*QRLQRD Trigger: ATCTCGCTGCAGTCTCTGCCAGAGAATATTGGAAAT...AAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGCGTAATTTGACTAGCTaGAAAAATTGCTCGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQRNLTS*KNCSGS Trigger: GCTCCCCGAGCAATTTTTCCAGCTAGTCAAATTACG...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | CATAAGGTGCTTCAGGCCACTCTCTCATCAGAAACACTGCTGGAGATTCACTCTGGTAATTCAGACAGCTaGTTTCCATCCAACCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HKVLQATLSSETLLEIHSGNSDS*FPSNQR Trigger: TCTCTGGTTGGATGGAAATCAGCTGTCTGAATTACC...AGAGTGAATCTCCAGCAGTGTTTCTGATGAGAGAGTGGCCTGAAGCACCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAGGGTCAGAACCCCCTTCCTGCTCTCTCTAACCCCAACACAAGACAAAAATGTGTGAGTCTGTTCTaGTCCAACTTCAAGATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EEGQNPLPALSNPNTRQKCVSLF*SNFKID Trigger: GTCAATCTTGAAGTTGGATCAGAACAGACTCACACA...TTTTTGTCTTGTGTTGGGGTTAGAGAGAGCAGGAAGGGGGTTCTGACCCTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTAACCCCAACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGGGTTCAGAAGGCATCTaGGGAAGTAAGACACACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTPTQDKNEGQVLTVVGSEGI*GSKTHV Trigger: AACGTGTGTCTTACTTCCTCAGATGCCTTCTGAACC...CACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTTGGGGTTAGAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCTGTCGATGGCCTCCACATaGCGGTTGCACCGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGYRIFKLPSATVILLSMAST*RLHRHR Trigger: CCTGTGGCGGTGCAACCGTCATGTGGAGGCCATCGA...CAGAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | TTTAACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTTCAAGTTCCACGAGCTaGATGAAGTTTGCTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNKTTPRRPSCCSRMPLFSSSTS*MKFAIS Trigger: AGAAATAGCAAACTTCATGCAGCTCGTGGAACTTGA...AAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGTCATTTGGGGAACAGATGATTTCCAATATTCTCTaGCAGAGACTGCAGCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVTQTAQTSSPQSFGEQMISNIL*QRLQRD Trigger: ATCTCGCTGCAGTCTCTGCCAGAGAATATTGGAAAT...CATCTGTTCCCCAAATGACTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGTCATTTGGGGAACAGATGGAATTTCATTATCACTaGGCCCAAGCTTCCGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: TVTQTAQTSSPQSFGEQMEFHYH*AQASVI Trigger: AATTACGGAAGCTTGGGCTCAGTGATAATGAAATTC...CATCTGTTCCCCAAATGACTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGGCAAGTTCTGGGAAATaGCTAAGTATGTCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQASSGK*LSMSKK Trigger: CTTCTTTGACATACTTAGTCATTTCCCAGAACTTGC...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR GCA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGTCAAGTTCCACGAGCTaGATGAAGTTTGCTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQSSSTS*MKFAIS Trigger: AGAAATAGCAAACTTCATGCAGCTCGTGGAACTTGA...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR GCA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGACAATCTACAGACCTTaGCTGAAATGTGTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQTIYRP*LKCVPL Trigger: AAGAGGAACACATTTCAGGCAAGGTCTGTAGATTGT...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCCCCCTGGGTGTGGAGTaGCTCGCCTCTGAAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFYLDIEFLSFLRQQSFFPLGVE*LASEVF Trigger: GAACACTTCAGAGGCGAGCCACTCCACACCCAGGGG...GAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTAGAGCTAGTGTTCATGCACACACAATCACAGGGCAGACCACACTAACTCAAGCTTCCGTAATTTaGCTAGCTGGAAAAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRASVHAHTITGQTTLTQASVI*LAGKIA Trigger: AGCAATTTTTCCAGCTAGTCAAATTACGGAAGCTTG...AGTTAGTGTGGTCTGCCCTGTGATTGTGTGTGCATGAACACTAGCTCTACCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGGTCAGAACCCCCTTCCTGCTCTCTCTAACCCCAACACAAGACAAAAAGAAGGCGATGCTTTCTaGAATTTCAGGTATATCATT | + |
|
Preference number: 4 (lower is better) Translates to: EEGQNPLPALSNPNTRQKEGDAF*NFRYII Trigger: AATGATATACCTGAAATTCCAGAAAGCATCGCCTTC...TTTTTGTCTTGTGTTGGGGTTAGAGAGAGCAGGAAGGGGGTTCTGACCCTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | CACGGAGTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGTTTTTCTCTGGAGGGAGCCGCTaGATTTCATTATCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGVDGTGKNQYFRPNLFFSGGSR*ISLSLS Trigger: GCTCAGTGATAATGAAATTCAGCGGCTCCCTCCAGA...GAAAAACAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCACTCCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGGCCACTCTCTCATCAGAAACACTGCTGGAGATTCACTCTTAAAACAATGTGTGAGTCTGTTCTaGTCCAACTTCAAGATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGHSLIRNTAGDSLLKQCVSLF*SNFKID Trigger: GTCAATCTTGAAGTTGGATCAGAACAGACTCACACA...TTGTTTTAAGAGTGAATCTCCAGCAGTGTTTCTGATGAGAGAGTGGCCTGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR TCA 90 bp | CACGGAGTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGTTTTTCGGTTCAGAAGGCATCTaGGGAAGTAAGACACACGTT | + |
|
Preference number: 4 (lower is better) Translates to: HGVDGTGKNQYFRPNLFFGSEGI*GSKTHV Trigger: AACGTGTGTCTTACTTCCTCAGATGCCTTCTGAACC...GAAAAACAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCACTCCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR TCA 90 bp | CTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCTGGGAGTGGCTCGCCTCTaGAGTGTTCTCGTTTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGYRIFKLPSATVILLGVARL*SVLVSF Trigger: AAACGAAACGAGAACACTTCAGAGGCGAGCCACTCC...CAGAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | AACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGTATTCTACTTATTACTGAAGTCAGCTACCTaGAGCGCTTTACAGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NTRQKRRSGVDSSVFYLLLKSAT*SALQKA Trigger: CGCCTTCTGTAAAGCGCTGCAGGTAGCTGACTTCAG...TAATAAGTAGAATACACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CCA 90 bp | GTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGTTTTTCTGCACACCTTCAACTTCAGGGTaGTCAGCGATAAGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VDGTGKNQYFRPNLFFCTPSTSG*SAIRAD Trigger: ATCTGCCCTTATCGCTGACCACCCTGAAGTTGAAGG...TGTGCAGAAAAACAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | AACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGTATTCTACTTATTAAGGAGAGGCTGCGACTaGTTGTCAGATAACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTRQKRRSGVDSSVFYLLRRGCD*LSDNHR Trigger: CCTGTGGTTATCTGACAACCAGTCGCAGCCTCTCCT...TAATAAGTAGAATACACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CCA 90 bp | AACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGTATTCTACTTATTAGGCTCTCTTGGCAGATaGGTTCAGAAGGCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTRQKRRSGVDSSVFYLLGSLGR*VQKASE Trigger: CTCAGATGCCTTCTGAACCCATCTGCCAAGAGAGCC...TAATAAGTAGAATACACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTGCTTCAGGCCACTCTCTCATCAGAAACACTGCTGGAGATTCACTCTTTCTTTAGTTTTCCAATaGCCTCAGGAATTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IRCFRPLSHQKHCWRFTLSLVFQ*PQELFL Trigger: TAGAAACAATTCCTGAGGGCATTGGAAAACTAAAGA...AAGAGTGAATCTCCAGCAGTGTTTCTGATGAGAGAGTGGCCTGAAGCACCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
||
| CDS-3UTR CCA 90 bp | CACGGAGTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGTTTTTCGAAGTTTGCTATTTCTaGAGGGAGCCGCTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HGVDGTGKNQYFRPNLFFEVCYF*REPLNF Trigger: GAAATTCAGCGGCTCCCTCCAGAAATAGCAAACTTC...GAAAAACAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCACTCCGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR TCA 90 bp | GTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGTTTTTCTGCACAGGTAATTCAGACAGCTaGTTTCCATCCAACCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDGTGKNQYFRPNLFFCTGNSDS*FPSNQR Trigger: TCTCTGGTTGGATGGAAATCAGCTGTCTGAATTACC...TGTGCAGAAAAACAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR GCA 90 bp | AACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGTATTCTACTTATTATCAAGTTCCACGAGCTaGATGAAGTTTGCTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTRQKRRSGVDSSVFYLLSSSTS*MKFAIS Trigger: AGAAATAGCAAACTTCATGCAGCTCGTGGAACTTGA...TAATAAGTAGAATACACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS CCA 90 bp | AGATCTCCTCGGGGACGTAGACCAGCGAGCAGTGGCGCTTGTCGATaGCCTCCACATGACGGTTGCACCGCCACAGGGGAATGCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSPRGRRPASSGACR*PPHDGCTATGECSG Trigger: TCCACTGCATTCCCCTGTGGCGGTGCAACCGTCATGTGGAGGCCATCGACAAGCGCCACTGCTCGCTGGTCTACGTCCCCGAGGAGATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183734.2 ENSMUST00000183873.8 |
||
| CDS-3UTR CAA 90 bp | CACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTGCAGCCGCTGTCGCTCAGCGGCGTGGTaGACCTCGTTTTTGTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HTQAPILLLKDATVCSRCRSAAW*TSFLFE Trigger: TTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCG...ACAGCGGCTGCAAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS TCA 90 bp | CCGCAACGCGGCAGGCTCTCTTGGCAGATGGGTTCAGAAGGCATCTaGGGAAGTAAGACACACGTTAAAATCTTCTCCCCGGTGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PQRGRLSWQMGSEGI*GSKTHVKIFSPVAR Trigger: CCGAGCCACCGGGGAGAAGATTTTAACGTGTGTCTTACTTCCTCAGATGCCTTCTGAACCCATCTGCCAAGAGAGCCTGCCGCGTTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | CCAGGTGGCCCATGCCTCTGGAGCAGGCACAGCCTGATGCTGCACACACCCGAGCCAAGCTTCCGTAATTaGACTAGCTGGAAAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: PGGPCLWSRHSLMLHTPEPSFRN*TSWKNC Trigger: ACAATTTTTCCAGCTAGTCAAATTACGGAAGCTTGG...CTCGGGTGTGTGCAGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113421.10 |
||
| CDS CCA 90 bp | CCAGACTCTCCAGGGCACCGCAACGCGGCAGGCTCTCTTGGCAGATaGGTTCAGAAGGCATCTGAGGAAGTAAGACACACGTTAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PDSPGHRNAAGSLGR*VQKASEEVRHTLKS Trigger: AGATTTTAACGTGTGTCTTACTTCCTCAGATGCCTTCTGAACCCATCTGCCAAGAGAGCCTGCCGCGTTGCGGTGCCCTGGAGAGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS CCA 90 bp | GGCTCTGTTAAAATCTTCTCCCCGGTGGCTCGGTCTATGTCTGTCTaGAACGTGAGGAGAGGCTGCGACTGGTTGTCAGATAACCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSVKIFSPVARSMSV*NVRRGCDWLSDNHR Trigger: CCTGTGGTTATCTGACAACCAGTCGCAGCCTCTCCTCACGTTCCAGACAGACATAGACCGAGCCACCGGGGAGAAGATTTTAACAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183467.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGGGTCAGAACCCCCTTCCTGCTCTCTCTAACCCCAACACAAGACAAAAAACGCGGCAGGCTCTCTaGGCAGATGGGTTCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEGQNPLPALSNPNTRQKTRQAL*ADGFRR Trigger: CCTTCTGAACCCATCTGCCAAGAGAGCCTGCCGCGT...TTTTTGTCTTGTGTTGGGGTTAGAGAGAGCAGGAAGGGGGTTCTGACCCTCTTC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS CCA 90 bp | ACACACGTTAAAATCTTCTCCCCGGTGGCTCGGTCTATGTCTGTCTaGAACGTGAGGAGAGGCTGCGACTGGTTGTCAGATAACCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: THVKIFSPVARSMSV*NVRRGCDWLSDNHR Trigger: CCTGTGGTTATCTGACAACCAGTCGCAGCCTCTCCTCACGTTCCAGACAGACATAGACCGAGCCACCGGGGAGAAGATTTTAACGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | TGTTACCCAGGTGGCCCATGCCTCTGGAGCAGGCACAGCCTGATGCTGCACACATGGTTGACCTCGTTTTaGTTTGAATCCAGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CYPGGPCLWSRHSLMLHTWLTSF*FESSPL Trigger: CAAAGGACTGGATTCAAACAAAAACGAGGTCAACCA...TGTGTGCAGCATCAGGCTGTGCCTGCTCCAGAGGCATGGGCCACCTGGGTAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS TCA 90 bp | CTGCAGGTAACCGAGTCAGTCTGTTGTCCCGGATGCAGAACATGGTaGGGCTGCAGCACCCGCCAATCTCTTTTGGCAATGACACTAATT | + |
|
Preference number: 5 (lower is better) Translates to: LQVTESVCCPGCRTW*GCSTRQSLLAMTLI Trigger: AATTAGTGTCATTGCCAAAAGAGATTGGCGGGTGCTGCAGCCTCACCATGTTCTGCATCCGGGACAACAGACTGACTCGGTTACCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | TTTAACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTCGCTCAGCGGCGTGGTaGACCTCGTTTTTGTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FNKTTPRRPSCCSRMPLFRSAAW*TSFLFE Trigger: TTCAAACAAAAACGAGGTCAACCACGCCGCTGAGCG...AAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS CCA 90 bp | TCTTCGTCCTTCTCGTCTTCCAAAAACCGGATTGCACTAACTCTGTaGACCGAGCGGTCATTCCAGGCTTCCTCAGACATGTCAGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: SSSFSSSKNRIALTL*TERSFQASSDMSVT Trigger: GGTAACTGACATGTCTGAGGAAGCCTGGAATGACCGCTCGGTCCACAGAGTTAGTGCAATCCGGTTTTTGGAAGACGAGAAGGACGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | ATTAGGACGGGAGGCTACTGGTACGCGGATGGACTGAGGGATGCAGAAGGCACTTGGTTGACCTCGTTTTaGTTTGAATCCAGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IRTGGYWYADGLRDAEGTWLTSF*FESSPL Trigger: CAAAGGACTGGATTCAAACAAAAACGAGGTCAACCA...AGTGCCTTCTGCATCCCTCAGTCCATCCGCGTACCAGTAGCCTCCCGTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | AATGTGCGACACCGATTTAACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAGTAGGAGTGCCCCAATaGATTCTGGCAAATTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: NVRHRFNKTTPRRPSCCSVGVPQ*ILANCR Trigger: TCTACAATTTGCCAGAATCAATTGGGGCACTCCTAC...TGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAATCGGTGTCGCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGCTCCTCAGGTGCACAGGAACATCTCTACAGCAGGGAAGACACAGCAACCCGCCAATCTCTTTaGGCAATGACACTAATTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AGGSSGAQEHLYSREDTATRQSL*AMTLIY Trigger: ATAAATTAGTGTCATTGCCAAAAGAGATTGGCGGGT...TGCTGTGTCTTCCCTGCTGTAGAGATGTTCCTGTGCACCTGAGGAGCCTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | TTTAACAAGACCACACCCAGGCGCCCATCTTGCTGCTCAAGGATGCCACTGTTTTTTGAATCCAGTCCTTaGGCGGCATTCATGTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FNKTTPRRPSCCSRMPLFFESSP*AAFMSF Trigger: GAACGACATGAATGCCGCCAAAGGACTGGATTCAAA...AAACAGTGGCATCCTTGAGCAGCAAGATGGGCGCCTGGGTGTGGTCTTGTTAAA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | CATAAGGTGCTTCAGGCCACTCTCTCATCAGAAACACTGCTGGAGATTCACTCTGTAGGAGTGCCCCAATaGATTCTGGCAAATTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HKVLQATLSSETLLEIHSVGVPQ*ILANCR Trigger: TCTACAATTTGCCAGAATCAATTGGGGCACTCCTAC...AGAGTGAATCTCCAGCAGTGTTTCTGATGAGAGAGTGGCCTGAAGCACCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
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| CDS-3UTR CAA 90 bp | AACAGAATTAGGACGGGAGGCTACTGGTACGCGGATGGACTGAGGGATGCAGAAGATCCAACTTCAAGATaGACAGCTTCTTTAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NRIRTGGYWYADGLRDAEDPTSR*TASLVF Trigger: GAAAACTAAAGAAGCTGTCAATCTTGAAGTTGGATC...TTCTGCATCCCTCAGTCCATCCGCGTACCAGTAGCCTCCCGTCCTAATTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | CGAAGGTCAGGTGTTGACAGTAGTGTATTCTACTTATTAGGAACAACTGATATTACGCGGCAGGCTCTCTaGGCAGATGGGTTCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSGVDSSVFYLLGTTDITRQAL*ADGFRR Trigger: CCTTCTGAACCCATCTGCCAAGAGAGCCTGCCGCGT...AATATCAGTTGTTCCTAATAAGTAGAATACACTACTGTCAACACCTGACCTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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| CDS-3UTR CAA 90 bp | ACACAAACAGGACCCTTTACTGTGACCCAAACAGCACAGACATCTTCCCCTCAGCCAAGCTTCCGTAATTaGACTAGCTGGAAAAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: TQTGPFTVTQTAQTSSPQPSFRN*TSWKNC Trigger: GCAATTTTTCCAGCTAGTCAAATTACGGAAGCTTGG...CTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTGTTTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
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| CDS-3UTR CAA 90 bp | GCTTCAGGCCACTCTCTCATCAGAAACACTGCTGGAGATTCACTCTTAAAACAAAACAATCTACAGACCTaGCCTGAAATGTGTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASGHSLIRNTAGDSLLKQNNLQT*PEMCSS Trigger: AGAGGAACACATTTCAGGCAAGGTCTGTAGATTGTT...TTGTTTTAAGAGTGAATCTCCAGCAGTGTTTCTGATGAGAGAGTGGCCTGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
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| CDS-3UTR CAA 90 bp | GTAAGGCACGGAGTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGCCAAGCTTCCGTAATTaGACTAGCTGGAAAAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRHGVDGTGKNQYFRPNLPSFRN*TSWKNC Trigger: GCAATTTTTCCAGCTAGTCAAATTACGGAAGCTTGG...CAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCACTCCGTGCCTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183873.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTAACCCCAACACAAGACAAAAACGAAGGTCAGGTGTTGACAGTAGTGTATACCCGCCAATCTCTTTaGGCAATGACACTAATTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLTPTQDKNEGQVLTVVYTRQSL*AMTLIY Trigger: ATAAATTAGTGTCATTGCCAAAAGAGATTGGCGGGT...ATACACTACTGTCAACACCTGACCTTCGTTTTTGTCTTGTGTTGGGGTTAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATGGTACAGGTAAAAACCAATACTTTAGGCCTAATTTGTTTTTCTGCACATTTGAATCCAGTCCTTaGGCGGCATTCATGTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VDGTGKNQYFRPNLFFCTFESSP*AAFMSF Trigger: GAACGACATGAATGCCGCCAAAGGACTGGATTCAAA...TGTGCAGAAAAACAAATTAGGCCTAAAGTATTGGTTTTTACCTGTACCATCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTTTATCTGGATATAGAATTTTTAAGCTTCCTTCGGCAACAGTCATTCTTCGTAGGAGTGCCCCAATaGATTCTGGCAAATTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VFYLDIEFLSFLRQQSFFVGVPQ*ILANCR Trigger: TCTACAATTTGCCAGAATCAATTGGGGCACTCCTAC...GAAGAATGACTGTTGCCGAAGGAAGCTTAAAAATTCTATATCCAGATAAAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS CCA 72 bp | CGGGGACGTAGACCAGCGAGCAGTGGCGCTTGTCGATaGCCTCCACATGACGGTTGCACCGCCACAGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGRRPASSGACR*PPHDGCTATGE Trigger: TTCCCCTGTGGCGGTGCAACCGTCATGTGGAGGCCATCGACAAGCGCCACTGCTCGCTGGTCTACGTCCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183734.2 ENSMUST00000183873.8 |
||
| CDS TCA 72 bp | ACCAGCGAGCAGTGGCGCTTGTCGATGGCCTCCACATaGCGGTTGCACCGCCACAGGGGAATGCAGTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSEQWRLSMAST*RLHRHRGMQWN Trigger: GTTCCACTGCATTCCCCTGTGGCGGTGCAACCGTCATGTGGAGGCCATCGACAAGCGCCACTGCTCGCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183734.2 ENSMUST00000183873.8 |
||
| CDS CAA 90 bp | AGTTCCACGGCCTGTGACACCTCTGCAGGTAACCGAGTCAGTCTGTaGTCCCGGATGCAGAACATGGTGAGGCTGCAGCACCCGCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: SSTACDTSAGNRVSL*SRMQNMVRLQHPPI Trigger: GATTGGCGGGTGCTGCAGCCTCACCATGTTCTGCATCCGGGACAACAGACTGACTCGGTTACCTGCAGAGGTGTCACAGGCCGTGGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS CAA 72 bp | GCCTGTGACACCTCTGCAGGTAACCGAGTCAGTCTGTaGTCCCGGATGCAGAACATGGTGAGGCTGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ACDTSAGNRVSL*SRMQNMVRLQH Trigger: GTGCTGCAGCCTCACCATGTTCTGCATCCGGGACAACAGACTGACTCGGTTACCTGCAGAGGTGTCACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS TCA 72 bp | TCTCCCCGGTGGCTCGGTCTATGTCTGTCTGGAACGTaGGGAGAGGCTGCGACTGGTTGTCAGATAACCACA | + |
|
Preference number: 6 (lower is better) Translates to: SPRWLGLCLSGT*GEAATGCQITT Trigger: TGTGGTTATCTGACAACCAGTCGCAGCCTCTCCTCACGTTCCAGACAGACATAGACCGAGCCACCGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
||
| CDS TCA 72 bp | ACCGAGTCAGTCTGTTGTCCCGGATGCAGAACATGGTaGGGCTGCAGCACCCGCCAATCTCTTTTGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: TESVCCPGCRTW*GCSTRQSLLAM Trigger: CATTGCCAAAAGAGATTGGCGGGTGCTGCAGCCTCACCATGTTCTGCATCCGGGACAACAGACTGACTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
||
| CDS CCA 72 bp | AAAATCTTCTCCCCGGTGGCTCGGTCTATGTCTGTCTaGAACGTGAGGAGAGGCTGCGACTGGTTGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: KIFSPVARSMSV*NVRRGCDWLSD Trigger: ATCTGACAACCAGTCGCAGCCTCTCCTCACGTTCCAGACAGACATAGACCGAGCCACCGGGGAGAAGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183467.2 ENSMUST00000183873.8 |
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| CDS CCA 72 bp | TTATCACTGAGCCCAAGCTTCCGTAATTTGACTAGCTaGAAAAATTGCTCGGGGAGCTCCCGGAGCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LSLSPSFRNLTS*KNCSGSSRSWL Trigger: CAACCAGCTCCGGGAGCTCCCCGAGCAATTTTTCCAGCTAGTCAAATTACGGAAGCTTGGGCTCAGTGATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000183734.2 ENSMUST00000183873.8 |
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| CDS CAA 90 bp | TCCTCTTTTGGCAATGACACTAATTTATTCCTGTCTGCATTCAAGTaGCTCAACTTCTTAAGTTTTCCAATGCTCTTAGGTAAAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSFGNDTNLFLSAFK*LNFLSFPMLLGKVR Trigger: CCTGACTTTACCTAAGAGCATTGGAAAACTTAAGAAGTTGAGCAACTTGAATGCAGACAGGAATAAATTAGTGTCATTGCCAAAAGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
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| CDS CAA 90 bp | TGTGATAAAACAATCTACAGACCTTGCCTGAAATGTGTTCCTCTTTaGGCAATGACACTAATTTATTCCTGTCTGCATTCAAGTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CDKTIYRPCLKCVPL*AMTLIYSCLHSSCS Trigger: TGAGCAACTTGAATGCAGACAGGAATAAATTAGTGTCATTGCCAAAAGAGGAACACATTTCAGGCAAGGTCTGTAGATTGTTTTATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183734.2 |
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| CDS CAA 72 bp | GGCAATGACACTAATTTATTCCTGTCTGCATTCAAGTaGCTCAACTTCTTAAGTTTTCCAATGCTCTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GNDTNLFLSAFK*LNFLSFPMLLG Trigger: ACCTAAGAGCATTGGAAAACTTAAGAAGTTGAGCAACTTGAATGCAGACAGGAATAAATTAGTGTCATTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113421.10 ENSMUST00000183734.2 ENSMUST00000183873.8 |
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| CDS CAA 90 bp | ATCTCTTTTGGCAATGACACTAATTTATTCCTGTCTGCATTCAAGTaGCTCAACTTCTTAAGTTTTCCAATGCTCTTAGGTAAAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: ISFGNDTNLFLSAFK*LNFLSFPMLLGKVR Trigger: CCTGACTTTACCTAAGAGCATTGGAAAACTTAAGAAGTTGAGCAACTTGAATGCAGACAGGAATAAATTAGTGTCATTGCCAAAAGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113421.10 ENSMUST00000183873.8 |
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