Pregenerated sensors for LRPPRC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024120Ensembl transcript IDs: ENSMUST00000112308.9, ENSMUST00000160011.2
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAGCTTCTCAGTCAGCTCTACCAACTTCTCAAGAGCTTCAACCTaGTTACTGGCAATGCATCGATCACAAAACCACTGGAGTCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: NSFSVSSTNFSRAST*LLAMHRSQNHWSLV Trigger: TACAAGACTCCAGTGGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACTGAGAAGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| 3UTR TCA 72 bp | TCAGTCAGCTCTACCAACTTCTCAAGAGCTTCAACCTaGTTACTGGCAATGCATCGATCACAAAACCACTGG | + |
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Preference number: 3 (lower is better) Translates to: SVSSTNFSRAST*LLAMHRSQNHW Trigger: CCAGTGGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| 3UTR CCA 72 bp | GCTCTACCAACTTCTCAAGAGCTTCAACCTGATTACTaGCAATGCATCGATCACAAAACCACTGGAGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: ALPTSQELQPDY*QCIDHKTTGVL Trigger: CAAGACTCCAGTGGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGGCCAGATACGTGTCTaGGCCAGGCTCAATGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHGQIRV*ARLNAG Trigger: GCCGGCATTGAGCCTGGCCCAGACACGTATCTGGCC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGAGCACAGTGCAGCGTaGACTGCAGTGAGGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHEHSAA*TAVRSC Trigger: ACAGCTCCTCACTGCAGTTCACGCTGCACTGTGCTC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCTGGGCCAGGCTCAATaGCGGCCTGTTTCATCACTG | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHLGQAQ*RPVSSL Trigger: CAGTGATGAAACAGGCCGGCATTGAGCCTGGCCCAG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCAGTGCAGCGTGAACTaGAGTGAGGAGCTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHQCSVN*SEELCS Trigger: GCTGCACAGCTCCTCACTGCAGTTCACGCTGCACTG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACAGCAGAAGCAGAGCTTaGTTGCTCCCTGGGCTACCT | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHSRSRA*LLPGLP Trigger: AGGTAGCCCAGGGAGCAATCAAGCTCTGCTTCTGCT...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGCTGTCCTATTGGCTTaGAGAGCACAGTGCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHAVLLA*RAQCSV Trigger: CACGCTGCACTGTGCTCTTCAAGCCAATAGGACAGC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGAAGCAGAGCTTGATTaGTCCCTGGGCTACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHEAELD*SLGYLS Trigger: GCTCAGGTAGCCCAGGGAGCAATCAAGCTCTGCTTC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCCAGCCACCATTCTCTaGATGGCCTCTATGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHPATIL*MASMLS Trigger: GGAAAGCATAGAGGCCATTCAGAGAATGGTGGCTGG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCTCATCCACCTTGCCTaGATCCACAAGCTGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHLIHLA*IHKLQE Trigger: TTCCTGCAGCTTGTGGATTCAGGCAAGGTGGATGAG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACTCACCCTTTTCCAGGTaGACAGTGACCAACGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHSPFSR*TVTNGK Trigger: CTTCCCGTTGGTCACTGTGCACCTGGAAAAGGGTGA...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | GCATCGATCACAAAACCACTGGAGTCTTGTAGGCCGAGCTCTAATGCCTGGAGTCCATTGTTTTCCAGGTaGACAGTGACCAACGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ASITKPLESCRPSSNAWSPLFSR*TVTNGK Trigger: CTTCCCGTTGGTCACTGTGCACCTGGAAAACAATGG...ACTCCAGGCATTAGAGCTCGGCCTACAAGACTCCAGTGGTTTTGTGATCGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCGGAGCTCTCGTCCTTaGACAGGGGTAATGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHRSSRP*TGVMPI Trigger: TATTGGCATTACCCCTGTCCAAGGACGAGAGCTCCG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGGAAGCTTATGTTGCTaGACGGCTTTGCCAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHGSLCC*TALPTQ Trigger: TTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACTACCTGAGCTACACGTaGTCTCAAAGACTCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHYLSYT*SQRLSA Trigger: TGCAGAGAGTCTTTGAGAGCACGTGTAGCTCAGGTA...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATGGAGCGAGCCACAGCTaGGCAGCAGAAGCAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHGASHS*AAEAEL Trigger: AAGCTCTGCTTCTGCTGCGCAGCTGTGGCTCGCTCC...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCTCCATCACTGCTTTTaGCAAAGCTGTCCTATTGGC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHLHHCF*QSCPIG Trigger: GCCAATAGGACAGCTTTGGCAAAAGCAGTGATGGAG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACATCCAAGGATCTTGCTaGCACCTTCAATGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHIQGSC*HLQCPQ Trigger: TTGGGGACATTGAAGGTGCCAGCAAGATCCTTGGAT...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATGCTCCCTGGGCTACCTaGGCTACACGTGCTCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHAPWAT*ATRALK Trigger: TTTGAGAGCACGTGTAGCTCAGGTAGCCCAGGGAGC...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCATGAAGTAATGGTCTaGCTTCTCCACTTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHHEVMV*LLHFLQ Trigger: CTGGAGAAAGTGGAGAAGTCAGACCATTACTTCATG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCCCAGTCAAATTGACTaGTGTTCTTTCTCACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHPSQID*CSFSQE Trigger: CTCCTGTGAGAAAGAACAGCAGTCAATTTGACTGGG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGTTCCACGCATCTTCTaGATTATCATGTCGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHVPRIF*IIMSTA Trigger: TGCTGTCGACATGATAATGCAGAAGATGCGTGGAAC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACTTTTCTCAGCAACGATaGCATACAATCTGGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHFSQQR*HTIWLG Trigger: GCCAAGCCAGATTGTATGCCATCGTTGCTGAGAAAA...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCCGAGCTCTAATGCCTaGAGTCTCAATGATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHPSSNA*SLNDLL Trigger: AAGAAGATCATTGAGACTCCAGGCATTAGAGCTCGG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACAGCGTGAACTGCAGTaGGGAGCTGTGCAGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHIQRELQ*GAVQLG Trigger: GCCAAGCTGCACAGCTCCTCACTGCAGTTCACGCTG...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGTTGGCCTTCAGCTTTaGGTTTCTCAAGTGTTGATT | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHVGLQL*VSQVLI Trigger: AATCAACACTTGAGAAACTCAAAGCTGAAGGCCAAC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATATGCAGTGAGGAGCTGTaGAGCTTGGCGTCCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHICSEEL*SLASLS Trigger: GCTGAGGGACGCCAAGCTGCACAGCTCCTCACTGCA...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACAGACATTCATTTTCCTaGAAAGCAGCTCGAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHRHSFS*KAARTD Trigger: GTCAGTTCGAGCTGCTTTGCAGGAAAATGAATGTCT...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGTCACGATGGCTTCATaGAGCTGTTTTACTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHVTMAS*SCFTVS Trigger: TGAAACAGTAAAACAGCTGCATGAAGCCATCGTGAC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACGTATGTTACTCGATTTaGTTGGATGTTTGCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHVCYSI*LDVCSL Trigger: GAGGGAGCAAACATCCAACCAAATCGAGTAACATAC...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACAAGTCCATTGCTTTCTaGATCAAATCAGTCTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHKSIAF*IKSVSP Trigger: AGGCGAGACTGATTTGATCCAGAAAGCAATGGACTT...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACTTTATATATGTTTCCTaGTCAGGATCCACTCCCACT | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHFIYVS*SGSTPT Trigger: AGTGGGAGTGGATCCTGATCAGGAAACATATATAAA...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCAAAATGAGGTTCATTaGATCTGGAATAGACCGTCT | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHQNEVH*IWNRPS Trigger: AGACGGTCTATTCCAGATGCAATGAACCTCATTTTG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATCACAAAACCACTGGAGTCTTGTAGGCCGAGCTCTAATGCCTGGAGTCTCAATTCTTGGAGTCTGCTGTaGTTTCCCAGTACTTTTACA | + |
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Preference number: 4 (lower is better) Translates to: ITKPLESCRPSSNAWSLNSWSLL*FPSTFT Trigger: TGTAAAAGTACTGGGAAAGCACAGCAGACTCCAAGA...ATTGAGACTCCAGGCATTAGAGCTCGGCCTACAAGACTCCAGTGGTTTTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATTGGCCTCATCCACCTTaGCTGAATCCACAAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHWPHPP*LNPQAA Trigger: TGCAGCTTGTGGATTCAGGCAAGGTGGATGAGGCCA...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACAATGCCAATAAAACCTaGAACGCAGTGTCTTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHNANKT*NAVSSN Trigger: GTTAGAAGACACTGCGTTCCAGGTTTTATTGGCATT...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATTCAAACGCTCCTCCTTaGCCTGTACCTCTGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHSNAPP*PVPLSH Trigger: GTGACTCAGAGGTACAGGCCAAGGAGGAGCGTTTGA...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | CAACTTCTCAAGAGCTTCAACCTGATTACTGGCAATGCATCGATCACAAAACCAGGAAGCTTATGTTGCTaGACGGCTTTGCCAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: QLLKSFNLITGNASITKPGSLCC*TALPTQ Trigger: TTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCC...TGGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS-3UTR TCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATTTGTCCCAGATCTTGTaGGCAAACTCTGTCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHLSQIL*ANSVLS Trigger: CGAGAGGACAGAGTTTGCTCACAAGATCTGGGACAA...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | AGTCAGCTCTACCAACTTCTCAAGAGCTTCAACCTGATTACTGGCAATGCATCGTTAAAGCTGCACCATTaGGGATGTGGAAAAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SQLYQLLKSFNLITGNASLKLHH*GCGKRT Trigger: TGTCCTTTTTCCACATCCTCAATGGTGCAGCTTTAA...CGATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATGGCTGCTCTCAGAGTTaGCAGAGCCCCTTTCAAATA | + |
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Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHGCSQS*QSPFQI Trigger: TATTTGAAAGGGGCTCTGGCAACTCTGAGAGCAGCC...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACTTGCTTTATATAAAATaGAAAGCTTTCAGGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHLLYIK*KAFRGL Trigger: GAGCCCCCTGAAAGCTTTGCATTTTATATAAAGCAA...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | CAAACAGCTTCTCAGTCAGCTCTACCAACTTCTCAAGAGCTTCAACCTGATTACACCCAAGAGTCACGATaGCTTCATGCAGCTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QTASQSALPTSQELQPDYTQESR*LHAAVL Trigger: TAAAACAGCTGCATGAAGCCATCGTGACTCTTGGGT...GTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACTGAGAAGCTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATTATGGCAGGCAATGCTaGCTTCAAGAGCAGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHYGRQC*LQEQQV Trigger: TACCTGCTGCTCTTGAAGCCAGCATTGCCTGCCATA...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATGTGAAGCCCTTGATGTaGGTCTCAGCGAAATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHVKPLM*VSAKSF Trigger: GAAGGATTTCGCTGAGACCCACATCAAGGGCTTCAC...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATATTGCATATTCTCCTCTaGGCAGAGCAGCAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHILHILL*AEQQQE Trigger: CTCCTGCTGCTGCTCTGCTCAGAGGAGAATATGCAA...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATCTCTCAAAGACTCTCTaGAGAAGCCCCTTTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHLSKTL*RSPFVM Trigger: CATCACAAAGGGGCTTCTGCAGAGAGTCTTTGAGAG...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACAAAGGACAAGACTGTTaGATCTTTGATAACAACATC | + |
|
Preference number: 4 (lower is better) Translates to: IGMCARIYTHRHTHTDTHKGQDC*IFDNNI Trigger: GATGTTGTTATCAAAGATGCAACAGTCTTGTCCTTT...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGCTTCAACCTGATTACTGGCAATGCATCGATCACAAAACCACTGGAGTCTGTCACGATGGCTTCATaGAGCTGTTTTACTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSFNLITGNASITKPLESVTMAS*SCFTVS Trigger: TGAAACAGTAAAACAGCTGCATGAAGCCATCGTGAC...AGACTCCAGTGGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS-3UTR CCA 90 bp | TCTCAAGAGCTTCAACCTGATTACTGGCAATGCATCGATCACAAAACCACTGGAGCACCATTGAGGATGTaGAAAAAGGACAAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQELQPDYWQCIDHKTTGAPLRM*KKDKTV Trigger: AACAGTCTTGTCCTTTTTCCACATCCTCAATGGTGC...TCCAGTGGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATATCTCTAAGAGAGCTCTaGCCTCATCCACCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHISLREL*PHPPCL Trigger: CAGGCAAGGTGGATGAGGCCAGAGCTCTCTTAGAGA...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACTTGGCCTGTACCTCTaGGTCACTCATGCTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHILGLYL*VTHAVN Trigger: ATTGACAGCATGAGTGACTCAGAGGTACAGGCCAAG...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAGCGAAATCCTTCACGTaGATTGCTTGGGTGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHIAKSFT*IAWVKS Trigger: CGACTTCACCCAAGCAATGCACGTGAAGGATTTCGC...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACTTCAAATCCAAGGCTaGTCTCAGAGTTGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHILQIQG*SQSCQS Trigger: GCTCTGGCAACTCTGAGAGCAGCCTTGGATTTGAAG...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAATCTGGGACGGAACCTaGTTCAAATCCAAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHIIWDGT*FKSKAA Trigger: AGCAGCCTTGGATTTGAAGCAGGTTCCGTCCCAGAT...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATTCTGAATGGCCTCTATaGTTTCCACATCACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHSEWPL*FPHHPS Trigger: TGAAGGGTGATGTGGAAAGCATAGAGGCCATTCAGA...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATGCAGCTATCAGCCTCTaGTATGTTACTCGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHAAISL*YVTRFG Trigger: ACCAAATCGAGTAACATACCAGAGGCTGATAGCTGC...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAAGAATCTGCCTAACCTaGCCAATGTCACCCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTRICLT*PMSPLS Trigger: TGAGAGGGGTGACATTGGCCAGGTTAGGCAGATTCT...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACACGATCACAAAACCACTaGAGTCTTGTAGGCCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTRSQNH*SLVGRA Trigger: AGCTCGGCCTACAAGACTCCAGTGGTTTTGTGATCG...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR TCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAGCCTTTTTCGGTTTCTaGGAAGTCCTCAGACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTAFFGF*EVLRQN Trigger: GTTCTGTCTGAGGACTTCTCAGAAACCGAAAAAGGC...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACATCCAGAGTCACACAGTaGCGCAAAAAGAAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTSRVTQ*RKKKLP Trigger: TGGCAGTTTCTTTTTGCGGCACTGTGTGACTCTGGA...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACACAAAGCCTCCATCACTaGTTTTGCCAAAGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTQSLHH*FCQSCP Trigger: AGGACAGCTTTGGCAAAAGCAGTGATGGAGGCTTTG...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAACCTCAAGGGCCTTTTaGATATTCTCCTCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHITSRAF*IFSSEQ Trigger: CTGCTCAGAGGAGAATATGCAAAAGGCCCTTGAGGT...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATTCTTGGAGTCTGCTGTaGTTTCCCAGTACTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHSWSLL*FPSTFT Trigger: TGTAAAAGTACTGGGAAAGCACAGCAGACTCCAAGA...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | CAGTCAGCTCTACCAACTTCTCAAGAGCTTCAACCTGATTACTGGCAATGCATCAAAGGACAAGACTGTTaGATCTTTGATAACAACATC | + |
|
Preference number: 4 (lower is better) Translates to: QSALPTSQELQPDYWQCIKGQDC*IFDNNI Trigger: GATGTTGTTATCAAAGATGCAACAGTCTTGTCCTTT...GATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATCCTGATTACTGGCAATaGATCGATCACAAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHPDYWQ*IDHKTT Trigger: AGTGGTTTTGTGATCGATGCATTGCCAGTAATCAGG...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACCTGAATCCACAAGCTaGAGGAATAGATCAGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHIPESTS*RNRSVT Trigger: CGTCACTGATCTATTCCTGCAGCTTGTGGATTCAGG...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAGCAGATCCTACAGGTTaGCCTTCAGCTTTGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTADPTG*PSALSF Trigger: GAAACTCAAAGCTGAAGGCCAACCTGTAGGATCTGC...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATTCGAAAGGAACTTCCTaGTTGCTGGTTTTCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHSKGTS*LLVFKI Trigger: GATCTTGAAAACCAGCAACCAGGAAGTTCCTTTCGA...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAAGAGCCCAGTCAAATTaGCTGCTGTTCTTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTRAQSN*LLFFLT Trigger: TGTGAGAAAGAACAGCAGTCAATTTGACTGGGCTCT...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAGCCGCAAAAAGAAACTaGCAAAGTTATCGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHIAAKRN*QSYRSS Trigger: AGAGCTCCGATAACTTTGGCAGTTTCTTTTTGCGGC...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATGCTCACAAAGTCCATTaGTTTCTGGATCAAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHAHKVH*FLDQIS Trigger: ACTGATTTGATCCAGAAAGCAATGGACTTTGTGAGC...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAAAGGAACTTCCTGGTTaGTGGTTTTCAAGATCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTKELPG*WFSRSR Trigger: CCGAGATCTTGAAAACCAGCAACCAGGAAGTTCCTT...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAGACGGGCTTGTAAAGTaGAAACTGATTCGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHIDGLVK*KLIRHS Trigger: AGAATGGCGAATCAGTTTGCACTTTACAAGCCCGTC...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAGTTACTCGATTTGGTTaGATGTTTGCTCCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHIVTRFG*MFAPSI Trigger: GATGGAGGGAGCAAACATCCAACCAAATCGAGTAAC...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAACCCAAGAGTCACGATaGCTTCATGCAGCTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTTQESR*LHAAVL Trigger: TAAAACAGCTGCATGAAGCCATCGTGACTCTTGGGT...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACACCACCATTCTCTGAATaGCCTCTATGCTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTPPFSE*PLCFPH Trigger: ATGTGGAAAGCATAGAGGCCATTCAGAGAATGGTGG...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR TCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACATTCATCTCCTGCAGCTaGTGGAAGTATTGTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTFISCS*WKYCLK Trigger: TTTGAGACAATACTTCCATCAGCTGCAGGAGATGAA...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATACCAATAACCATGTCTaGCTCATATTTTGCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHTNNHV*LIFCFH Trigger: GTGAAAGCAAAATATGAGTCAGACATGGTTATTGGT...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATATTAAAGCTGCACCATTaGGGATGTGGAAAAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHILKLHH*GCGKRT Trigger: TGTCCTTTTTCCACATCCTCAATGGTGCAGCTTTAA...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATGATAAAAACCATTTTTaGGAGTCCAATCGTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHDKNHF*ESNRVK Trigger: CTTGACACGATTGGACTCTCAAAAATGGTTTTTATC...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAAAGCTAAAAATAACCTaGAAGAAGTCGCGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTKLKIT*KKSRSM Trigger: CATGGACCGCGACTTCTTGCAGGTTATTTTTAGCTT...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATCTCTTTGCCAGTCACTaGTTATTTTGTATAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKYILEITFRHRHVRAHLFASH*LFCIAS Trigger: TGAAGCTATACAAAATAAGCAGTGACTGGCAAAGAG...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAGCACCATTGAGGATGTaGAAAAAGGACAAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTAPLRM*KKDKTV Trigger: AACAGTCTTGTCCTTTTTCCACATCCTCAATGGTGC...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAAGCAAAGGTACTACTTaGGAGGAGACATTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHISKGTT*EETFIF Trigger: GAAAATGAATGTCTCCTCGCAAGTAGTACCTTTGCT...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR GCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAATAATGTTCTCTTCTTaGATTTTGGTCCACGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTIMFSS*ILVHAA Trigger: TGCTGCGTGGACCAAAATGCAAGAAGAGAACATTAT...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACTTCAACCTGATTACTaGCAATGCATCGATCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHILQPDY*QCIDHK Trigger: TTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAG...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR TCA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAAAGCATTGTAATGACTaGCATCATATACGACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: YILEITFRHRHVRAHIHTKHCND*HHIRHL Trigger: TAGGTGTCGTATATGATGTCAGTCATTACAATGCTT...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR GCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACCTCTGAGTCACTCATaGTGTCAATCAAGTTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHIPLSHS*CQSSYK Trigger: TTTATAACTTGATTGACAGCATGAGTGACTCAGAGG...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACTAGCTTCAAGTTCTTaGCTGTCAAATACTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: LKYILEITFRHRHVRAHILASSS*LSNTHT Trigger: TGTATGAGTATTTGACAGCCAAGAACTTGAAGCTAG...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 90 bp | TGGCCTCTATGCTTTCCACATCACCCTTCAAGGCCAACGCCTGGATaGGGCGGGTCACGGCGATCTGGGACGGAACCTGCTTCAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: WPLCFPHHPSRPTPG*GGSRRSGTEPASNP Trigger: TGGATTTGAAGCAGGTTCCGTCCCAGATCGCCGTGACCCGCCTCATCCAGGCGTTGGCCTTGAAGGGTGATGTGGAAAGCATAGAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 90 bp | CTTTTGCCAAAGCTGTCCTATTGGCTTGAAGAGCACAGTGCAGCGTaGACTGCAGTGAGGAGCTGTGCAGCTTGGCGTCCCTCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPKLSYWLEEHSAA*TAVRSCAAWRPSAS Trigger: GGAGGCTGAGGGACGCCAAGCTGCACAGCTCCTCACTGCAGTTCACGCTGCACTGTGCTCTTCAAGCCAATAGGACAGCTTTGGCAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 90 bp | GCGGGTCACGGCGATCTGGGACGGAACCTGCTTCAAATCCAAGGCTaGTCTCAGAGTTGCCAGAGCCCCTTTCAAATAATCCCGCCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGHGDLGRNLLQIQG*SQSCQSPFQIIPPN Trigger: GTTAGGCGGGATTATTTGAAAGGGGCTCTGGCAACTCTGAGAGCAGCCTTGGATTTGAAGCAGGTTCCGTCCCAGATCGCCGTGACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 90 bp | GCTCCTCTTGAAGATCCCTTTTCTCAGCAACGATGGCATACAATCTaGCTTGGCTCAGACGCTCTCCTGCAGCCGGCCGGCTACCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: APLEDPFSQQRWHTI*LGSDALLQPAGYQQ Trigger: CTGTTGGTAGCCGGCCGGCTGCAGGAGAGCGTCTGAGCCAAGCCAGATTGTATGCCATCGTTGCTGAGAAAAGGGATCTTCAAGAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 90 bp | AAGTCCTCAGACAGAACACCGACAGAAGCGAGCTCTGCTCGGCAATaGCACCGCATCTCTCTAAGAGAGCTCTGGCCTCATCCACCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSSDRTPTEASSARQ*HRISLRELWPHPPC Trigger: GCAAGGTGGATGAGGCCAGAGCTCTCTTAGAGAGATGCGGTGCCATTGCCGAGCAGAGCTCGCTTCTGTCGGTGTTCTGTCTGAGGACTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 90 bp | ACAGCTGCGCAGCAGAAGCAGAGCTTGATTGCTCCCTGGGCTACCTaGGCTACACGTGCTCTCAAAGACTCTCTGCAGAAGCCCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TAAQQKQSLIAPWAT*ATRALKDSLQKPLC Trigger: ACAAAGGGGCTTCTGCAGAGAGTCTTTGAGAGCACGTGTAGCTCAGGTAGCCCAGGGAGCAATCAAGCTCTGCTTCTGCTGCGCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 90 bp | CTCCAGAATCTGCCTAACCTGGCCAATGTCACCCCTCTCAGCATGTaGATTCAACAAGGCCAGATACGTGTCTGGGCCAGGCTCAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQNLPNLANVTPLSM*IQQGQIRVWARLNA Trigger: GGCATTGAGCCTGGCCCAGACACGTATCTGGCCTTGTTGAATGCACATGCTGAGAGGGGTGACATTGGCCAGGTTAGGCAGATTCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 90 bp | GCAATGCTGGCTTCAAGAGCAGCAGGTAAGTCACCCTTTTCCAGGTaGACAGTGACCAACGGGAAGCTTATGTTGCTGGACGGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AMLASRAAGKSPFSR*TVTNGKLMLLDGFA Trigger: GGCAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAAGGGTGACTTACCTGCTGCTCTTGAAGCCAGCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 90 bp | AGGGCCTTTTGCATATTCTCCTCTGAGCAGAGCAGCAGCAGGAGCTaGTTCAGGGCAGATCCTACAGGTTGGCCTTCAGCTTTGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAFCIFSSEQSSSRS*FRADPTGWPSALSF Trigger: GAAACTCAAAGCTGAAGGCCAACCTGTAGGATCTGCCCTGAAGCAGCTCCTGCTGCTGCTCTGCTCAGAGGAGAATATGCAAAAGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 90 bp | CATCTCCAAACCACAACTCCGGAACGTCGAAAGGAACTTCCTGGTTaGTGGTTTTCAAGATCTCGGCTAAGAGCCGCAGTGTCCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLQTTTPERRKELPG*WFSRSRLRAAVSAL Trigger: GAGAGCGGACACTGCGGCTCTTAGCCGAGATCTTGAAAACCAGCAACCAGGAAGTTCCTTTCGACGTTCCGGAGTTGTGGTTTGGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 90 bp | ATGAGGAGGCTGTTGGCAGCATCGTTCAGTGTGAAGCCCTTGATGTaGGTCTCAGCGAAATCCTTCACGTGCATTGCTTGGGTGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MRRLLAASFSVKPLM*VSAKSFTCIAWVKS Trigger: CGACTTCACCCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTTCACACTGAACGATGCTGCCAACAGCCTCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 90 bp | CTGAGCTACACGTGCTCTCAAAGACTCTCTGCAGAAGCCCCTTTGTaGTGCGGCCTGTTCTCCGGACAGAATTATCCAGTCTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSYTCSQRLSAEAPL*CGLFSGQNYPVSSE Trigger: CTCTGATGAGACTGGATAATTCTGTCCGGAGAACAGGCCGCATCACAAAGGGGCTTCTGCAGAGAGTCTTTGAGAGCACGTGTAGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 90 bp | CAGGTGCACAGTGACCAACGGGAAGCTTATGTTGCTGGACGGCTTTaGCAACCCAAGAGTCACGATGGCTTCATGCAGCTGTTTTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QVHSDQREAYVAGRL*QPKSHDGFMQLFYC Trigger: ACAGTAAAACAGCTGCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS CCA 90 bp | GTCACCCCTCTCAGCATGTGCATTCAACAAGGCCAGATACGTGTCTaGGCCAGGCTCAATGCCGGCCTGTTTCATCACTGTGAGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: VTPLSMCIQQGQIRV*ARLNAGLFHHCENI Trigger: AATATTCTCACAGTGATGAAACAGGCCGGCATTGAGCCTGGCCCAGACACGTATCTGGCCTTGTTGAATGCACATGCTGAGAGGGGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 90 bp | CCCTTGTTCTTGGCTCACAAAGTCCATTGTTTTCCAGGTGCACAGTaGCCAACGGGAAGCTTATGTTGCTGGACGGCTTTGCCAACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLFLAHKVHCFPGAQ*PTGSLCCWTALPTQ Trigger: TTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAACAATGGACTTTGTGAGCCAAGAACAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS GCA 90 bp | TGTGAAGCCCTTGATGTGGGTCTCAGCGAAATCCTTCACGTGCATTaGTTGGGTGAAGTCGTCCTTACTCAGCAGCAAGCCTATCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CEALDVGLSEILHVH*LGEVVLTQQQAYQG Trigger: ACCTTGATAGGCTTGCTGCTGAGTAAGGACGACTTCACCCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 90 bp | TTCAGTGTGAAGCCCTTGATGTGGGTCTCAGCGAAATCCTTCACGTaGATTGCTTGGGTGAAGTCGTCCTTACTCAGCAGCAAGCCTATC | + |
|
Preference number: 5 (lower is better) Translates to: FSVKPLMWVSAKSFT*IAWVKSSLLSSKPI Trigger: GATAGGCTTGCTGCTGAGTAAGGACGACTTCACCCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTTCACACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 90 bp | AAGCCCTTGATGTGGGTCTCAGCGAAATCCTTCACGTGCATTGCTTaGGTGAAGTCGTCCTTACTCAGCAGCAAGCCTATCAAGGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KPLMWVSAKSFTCIA*VKSSLLSSKPIKVL Trigger: TAGCACCTTGATAGGCTTGCTGCTGAGTAAGGACGACTTCACCCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 90 bp | TCGGATAGGAAACCCTTCTTCCCTCAAAGCCTCCATCACTGCTTTTaGCAAAGCTGTCCTATTGGCTTGAAGAGCACAGTGCAGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SDRKPFFPQSLHHCF*QSCPIGLKSTVQRE Trigger: TTCACGCTGCACTGTGCTCTTCAAGCCAATAGGACAGCTTTGGCAAAAGCAGTGATGGAGGCTTTGAGGGAAGAAGGGTTTCCTATCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 90 bp | GAGCAGAGCAGCAGCAGGAGCTGCTTCAGGGCAGATCCTACAGGTTaGCCTTCAGCTTTGAGTTTCTCAAGTGTTGATTCCAAATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EQSSSRSCFRADPTG*PSALSFSSVDSKSD Trigger: ATCTGATTTGGAATCAACACTTGAGAAACTCAAAGCTGAAGGCCAACCTGTAGGATCTGCCCTGAAGCAGCTCCTGCTGCTGCTCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 90 bp | TTTTTGAGAGTCCAATCGTGTCAAGTCCAGCCACCATTCTCTGAATaGCCTCTATGCTTTCCACATCACCCTTCAAGGCCAACGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLRVQSCQVQPPFSE*PLCFPHHPSRPTPG Trigger: TCCAGGCGTTGGCCTTGAAGGGTGATGTGGAAAGCATAGAGGCCATTCAGAGAATGGTGGCTGGACTTGACACGATTGGACTCTCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACTTCAGTGTGAAGCCCTaGATGTGGGTCTCAGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IGMCARIYTHRHTHTDTHFSVKP*MWVSAK Trigger: TTTCGCTGAGACCCACATCAAGGGCTTCACACTGAA...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 90 bp | CCTCATCCACCTTGCCTGAATCCACAAGCTGCAGGAATAGATCAGTaGCGGGCTTGTAAAGTGCAAACTGATTCGCCATTCTCTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PHPPCLNPQAAGIDQ*RACKVQTDSPFSQT Trigger: TGTCTGAGAGAATGGCGAATCAGTTTGCACTTTACAAGCCCGTCACTGATCTATTCCTGCAGCTTGTGGATTCAGGCAAGGTGGATGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTCAGTCAGCTCTACCAACTTCTCAAGAGCTTCAACCTGATTACTGGCCATCGTCATCTCCCCTaGTTCTTGGCTCACAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLSQLYQLLKSFNLITGHRHLP*FLAHKV Trigger: GACTTTGTGAGCCAAGAACAAGGGGAGATGACGATG...GCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACTGAGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS TCA 90 bp | GCTAAAAATAACCTGCAAGAAGTCGCGGTCCATGAAGTAATGGTCTaGCTTCTCCACTTTCTCCAGAATCTGCCTAACCTGGCCAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: AKNNLQEVAVHEVMV*LLHFLQNLPNLANV Trigger: GACATTGGCCAGGTTAGGCAGATTCTGGAGAAAGTGGAGAAGTCAGACCATTACTTCATGGACCGCGACTTCTTGCAGGTTATTTTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 90 bp | ATGTTGCTGGACGGCTTTGCCAACCCAAGAGTCACGATGGCTTCATaGAGCTGTTTTACTGTTTCAATTTCACCTCTTAAAGCTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: MLLDGFANPRVTMAS*SCFTVSISPLKAAP Trigger: TGGTGCAGCTTTAAGAGGTGAAATTGAAACAGTAAAACAGCTGCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS CCA 90 bp | AACATTACAGTAGGCAGCTATCAGCCTCTGGTATGTTACTCGATTTaGTTGGATGTTTGCTCCCTCCATCTTTGCCAGGAAGTCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: NITVGSYQPLVCYSI*LDVCSLHLCQEVSR Trigger: CCTACTGACTTCCTGGCAAAGATGGAGGGAGCAAACATCCAACCAAATCGAGTAACATACCAGAGGCTGATAGCTGCCTACTGTAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTCAGTCAGCTCTACCAACTTCTCAAGAGCTTCAACCTGATTACTGGCCTTAAAGCTGCACCATaGAGGATGTGGAAAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QLLSQLYQLLKSFNLITGLKAAP*RMWKKD Trigger: GTCCTTTTTCCACATCCTCAATGGTGCAGCTTTAAG...GCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACTGAGAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS-3UTR CAA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACATGAAGGGCTTTCCCTaGCTTCCTTTAGTTGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: IGMCARIYTHRHTHTDTHMKGFP*LPLVAL Trigger: TAAAGCAACTAAAGGAAGCAAGGGAAAGCCCTTCAT...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 90 bp | TGCTCTTCGATCACTTTTCTGAATAGATACGACAAGCCAAAGTACTaGGGTTCTATGGCTTGGTTCTCGGAAGCAAGCAGGTGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: CSSITFLNRYDKPKY*GSMAWFSEASRCSM Trigger: CATTGAGCACCTGCTTGCTTCCGAGAACCAAGCCATAGAACCTCAGTACTTTGGCTTGTCGTATCTATTCAGAAAAGTGATCGAAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 90 bp | GGAAGCTTATGTTGCTGGACGGCTTTGCCAACCCAAGAGTCACGATaGCTTCATGCAGCTGTTTTACTGTTTCAATTTCACCTCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSLCCWTALPTQESR*LHAAVLLFQFHLLK Trigger: CTTTAAGAGGTGAAATTGAAACAGTAAAACAGCTGCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS-3UTR CAA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACACAGCAGAAGCAGAGCTaGATTGCTCCCTGGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: YILEITFRHRHVRAHIHTQQKQS*IAPWAT Trigger: GGTAGCCCAGGGAGCAATCAAGCTCTGCTTCTGCTG...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATAGGCTGCTCTCAGAGTaGCCAGAGCCCCTTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLKYILEITFRHRHVRAHRLLSE*PEPLSN Trigger: ATTTGAAAGGGGCTCTGGCAACTCTGAGAGCAGCCT...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | AAGAGCTTCAACCTGATTACTGGCAATGCATCGATCACAAAACCACTGGAGTCTCATCTCCCCTTGTTCTaGGCTCACAAAGTCCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSFNLITGNASITKPLESHLPLF*AHKVHC Trigger: ACAATGGACTTTGTGAGCCAAGAACAAGGGGAGATG...AGACTCCAGTGGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS GCA 90 bp | CTTCTTGCATTTTGGTCCACGCAGCATCCGCTCTTTGCCAGTCACTaGTTATTTTGTATAGCTTCAGTAAGTTGTAGTACATCTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLAFWSTQHPLFASH*LFCIASVSCSTSGL Trigger: GAGACCAGATGTACTACAACTTACTGAAGCTATACAAAATAAGCAGTGACTGGCAAAGAGCGGATGCTGCGTGGACCAAAATGCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 90 bp | CTATGGCTTGGTTCTCGGAAGCAAGCAGGTGCTCAATGTTTTCTATaGCAGCATCAAGTTTATTATTCTTCATCTGGGCCAAAGCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LWLGSRKQAGAQCFL*QHQVYYSSSGPKRC Trigger: ACATCGCTTTGGCCCAGATGAAGAATAATAAACTTGATGCTGCCATAGAAAACATTGAGCACCTGCTTGCTTCCGAGAACCAAGCCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | CTCAGTCAGCTCTACCAACTTCTCAAGAGCTTCAACCTGATTACTGGCAATGCAAATGTTAATAGCATCTaGGAGTCTGCTGTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQLYQLLKSFNLITGNANVNSI*ESAVLS Trigger: GGAAAGCACAGCAGACTCCAAGATGCTATTAACATT...TGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS-3UTR CAA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACAAGACTGTTGCATCTTaGATAACAACATCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGMCARIYTHRHTHTDTHKTVAS*ITTSFS Trigger: AGAGAAGGATGTTGTTATCAAAGATGCAACAGTCTT...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATCATCTCCCCTTGTTCTaGGCTCACAAAGTCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLKYILEITFRHRHVRAHHLPLF*AHKVHC Trigger: GCAATGGACTTTGTGAGCCAAGAACAAGGGGAGATG...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | ATAGGCATGTGCGCGCGCATATACACACATAGACACACACACACAGACACACACCAGTCACTGCTTATTTaGTATAGCTTCAGTAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IGMCARIYTHRHTHTDTHQSLLI*YSFSKL Trigger: CAACTTACTGAAGCTATACAAAATAAGCAGTGACTG...GTGTGTGTCTGTGTGTGTGTGTCTATGTGTGTATATGCGCGCGCACATGCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS-3UTR CAA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATCAGCTGATGGAAGTATaGTCTCAAACGCTCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLKYILEITFRHRHVRAHQLMEV*SQTLLL Trigger: AAGGAGGAGCGTTTGAGACAATACTTCCATCAGCTG...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAATCCCGCCTAACTaGCCTTATGATGAGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLKYILEITFRHRHVRAHIIPPN*PYDEEA Trigger: AGCCTCCTCATCATAAGGCAAGTTAGGCGGGATTAT...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS TCA 90 bp | ATTCTTCATCTGGGCCAAAGCGATGTTATTGATAAAAACCATTTTTaGGAGTCCAATCGTGTCAAGTCCAGCCACCATTCTCTGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILHLGQSDVIDKNHF*ESNRVKSSHHSLNG Trigger: GCCATTCAGAGAATGGTGGCTGGACTTGACACGATTGGACTCTCAAAAATGGTTTTTATCAATAACATCGCTTTGGCCCAGATGAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 90 bp | TCTTTCATCTCCTTTAGAATGTTAATAGCATCTTGGAGTCTGCTGTaGTTTCCCAGTACTTTTACAAGGGCTACGTACTTGGCAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFISFRMLIASWSLL*FPSTFTRATYLAVS Trigger: TGACACTGCCAAGTACGTAGCCCTTGTAAAAGTACTGGGAAAGCACAGCAGACTCCAAGATGCTATTAACATTCTAAAGGAGATGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
||
| CDS GCA 90 bp | ATTCTCTCAGACATGATGCTTAACTTCTCTAGCGCTGGTTCCATCTaGTCTTCGATCACTTTTCTGAATAGATACGACAAGCCAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ILSDMMLNFSSAGSI*SSITFLNRYDKPKY Trigger: GTACTTTGGCTTGTCGTATCTATTCAGAAAAGTGATCGAAGAGCAGATGGAACCAGCGCTAGAGAAGTTAAGCATCATGTCTGAGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACACCTCCATCACTGCTTTaGCCAAAGCTGTCCTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: YILEITFRHRHVRAHIHTPPSLL*PKLSYW Trigger: CCAATAGGACAGCTTTGGCAAAAGCAGTGATGGAGG...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATCTTAAAGCTGCACCATaGAGGATGTGGAAAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLKYILEITFRHRHVRAHLKAAP*RMWKKD Trigger: GTCCTTTTTCCACATCCTCAATGGTGCAGCTTTAAG...ATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACACATCGTCATCTCCCCTaGTTCTTGGCTCACAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YILEITFRHRHVRAHIHTHRHLP*FLAHKV Trigger: GACTTTGTGAGCCAAGAACAAGGGGAGATGACGATG...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACATTCTCTTCTTGCATTTaGGTCCACGCAGCATCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: YILEITFRHRHVRAHIHTFSSCI*VHAASA Trigger: AGCGGATGCTGCGTGGACCAAAATGCAAGAAGAGAA...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS TCA 90 bp | ACTACTTGCGAGGAGACATTCATTTTCCTGCAAAGCAGCTCGAACTaGCTGTGCACTATCAAAGCACGGAAACACATAGTTTATATATGT | + |
|
Preference number: 5 (lower is better) Translates to: TTCEETFIFLQSSSN*LCTIKARKHIVYIC Trigger: ACATATATAAACTATGTGTTTCCGTGCTTTGATAGTGCACAGTCAGTTCGAGCTGCTTTGCAGGAAAATGAATGTCTCCTCGCAAGTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CCA 90 bp | ACAACATCCTTCTCTTTCATCTCCTTTAGAATGTTAATAGCATCTTaGAGTCTGCTGTGCTTTCCCAGTACTTTTACAAGGGCTACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TTSFSFISFRMLIAS*SLLCFPSTFTRATY Trigger: GTACGTAGCCCTTGTAAAAGTACTGGGAAAGCACAGCAGACTCCAAGATGCTATTAACATTCTAAAGGAGATGAAAGAGAAGGATGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACAGAGCCCAGTCAAATaGACTGCTGTTCTTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKYILEITFRHRHVRAHIQSPVK*TAVLSH Trigger: GTGAGAAAGAACAGCAGTCAATTTGACTGGGCTCTG...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | CCAACTTCTCAAGAGCTTCAACCTGATTACTGGCAATGCATCGATCACAAAACCAAGACTGTTGCATCTTaGATAACAACATCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PTSQELQPDYWQCIDHKTKTVAS*ITTSFS Trigger: AGAGAAGGATGTTGTTATCAAAGATGCAACAGTCTT...GGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATATGTTACTCGATTTGGTaGGATGTTTGCTCCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LKYILEITFRHRHVRAHICYSIW*DVCSLH Trigger: ATGGAGGGAGCAAACATCCAACCAAATCGAGTAACA...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAATAAATCCAAGGATCTaGCTGGCACCTTCAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKYILEITFRHRHVRAHIINPRI*LAPSMS Trigger: GGACATTGAAGGTGCCAGCAAGATCCTTGGATTTAT...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAAAAGGAACTTCCTGGTaGCTGGTTTTCAAGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LKYILEITFRHRHVRAHIKGTSW*LVFKIS Trigger: CGAGATCTTGAAAACCAGCAACCAGGAAGTTCCTTT...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS TCA 90 bp | ATGTTCTGTAAGTTCCCATTTATTGCTTCATTCTTCACTTCAGCTTaGGCAAAGGTACTACTTGCGAGGAGACATTCATTTTCCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MFCKFPFIASFFTSA*AKVLLARRHSFSCK Trigger: TTTGCAGGAAAATGAATGTCTCCTCGCAAGTAGTACCTTTGCTCAAGCTGAAGTGAAGAATGAAGCAATAAATGGGAACTTACAGAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAATTCTTCACTTCAGCTaGAGCAAAGGTACTACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YILEITFRHRHVRAHIHTILHFS*SKGTTC Trigger: GCAAGTAGTACCTTTGCTCAAGCTGAAGTGAAGAAT...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATAAATGTTAATAGCATCTaGGAGTCTGCTGTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKYILEITFRHRHVRAHINVNSI*ESAVLS Trigger: GGAAAGCACAGCAGACTCCAAGATGCTATTAACATT...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CCA 90 bp | TTTACTGTTTCAATTTCACCTCTTAAAGCTGCACCATTGAGGATGTaGAAAAAGGACAAGACTGTTGCATCTTTGATAACAACATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTVSISPLKAAPLRM*KKDKTVASLITTSF Trigger: GAAGGATGTTGTTATCAAAGATGCAACAGTCTTGTCCTTTTTCCACATCCTCAATGGTGCAGCTTTAAGAGGTGAAATTGAAACAGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
||
| CDS-3UTR CAA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACAGGATCCACTCCCACTTaGTTCATTATTTTGAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: YILEITFRHRHVRAHIHTGSTPT*FIILRI Trigger: TATCCTCAAAATAATGAACAAAGTGGGAGTGGATCC...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | TACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATACACACATTCCTTGAACATTTTTaGTTTTCTGATGCCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YILEITFRHRHVRAHIHTFLEHF*FSDAQQ Trigger: TTGCTGGGCATCAGAAAACAAAAAATGTTCAAGGAA...TGTGTGTATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTACATTTTAGAAATAACATTTAGACATAGGCATGTGCGCGCGCATATATTACTCTTCTTTAGTTaGCAGTTAGACAACAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKYILEITFRHRHVRAHILLFFS*QLDNNV Trigger: GACGTTGTTGTCTAACTGCAAACTAAAGAAGAGTAA...TATATGCGCGCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS TCA 72 bp | AGGAGCGAGCCACAGCTGCGCAGCAGAAGCAGAGCTTaGTTGCTCCCTGGGCTACCTGAGCTACACGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSEPQLRSRSRA*LLPGLPELHVL Trigger: GAGCACGTGTAGCTCAGGTAGCCCAGGGAGCAATCAAGCTCTGCTTCTGCTGCGCAGCTGTGGCTCGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS TCA 72 bp | TGCTTTCCACATCACCCTTCAAGGCCAACGCCTGGATaGGGCGGGTCACGGCGATCTGGGACGGAACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CFPHHPSRPTPG*GGSRRSGTEPA Trigger: AGCAGGTTCCGTCCCAGATCGCCGTGACCCGCCTCATCCAGGCGTTGGCCTTGAAGGGTGATGTGGAAAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CCA 72 bp | AAGGCCAACGCCTGGATGAGGCGGGTCACGGCGATCTaGGACGGAACCTGCTTCAAATCCAAGGCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KANAWMRRVTAI*DGTCFKSKAAL Trigger: GAGAGCAGCCTTGGATTTGAAGCAGGTTCCGTCCCAGATCGCCGTGACCCGCCTCATCCAGGCGTTGGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS TCA 72 bp | ATTGGCTTGAAGAGCACAGTGCAGCGTGAACTGCAGTaGGGAGCTGTGCAGCTTGGCGTCCCTCAGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: IGLKSTVQRELQ*GAVQLGVPQPP Trigger: CGGAGGCTGAGGGACGCCAAGCTGCACAGCTCCTCACTGCAGTTCACGCTGCACTGTGCTCTTCAAGCCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | GCGAGCCACAGCTGCGCAGCAGAAGCAGAGCTTGATTaGTCCCTGGGCTACCTGAGCTACACGTGCTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ASHSCAAEAELD*SLGYLSYTCSQ Trigger: TTGAGAGCACGTGTAGCTCAGGTAGCCCAGGGAGCAATCAAGCTCTGCTTCTGCTGCGCAGCTGTGGCTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CCA 72 bp | TCTATGCTTTCCACATCACCCTTCAAGGCCAACGCCTaGATGAGGCGGGTCACGGCGATCTGGGACGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: SMLSTSPFKANA*MRRVTAIWDGT Trigger: GGTTCCGTCCCAGATCGCCGTGACCCGCCTCATCCAGGCGTTGGCCTTGAAGGGTGATGTGGAAAGCATAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | GGGCTACCTGAGCTACACGTGCTCTCAAAGACTCTCTaGAGAAGCCCCTTTGTGATGCGGCCTGTTCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPELHVLSKTL*RSPFVMRPVLR Trigger: CCGGAGAACAGGCCGCATCACAAAGGGGCTTCTGCAGAGAGTCTTTGAGAGCACGTGTAGCTCAGGTAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | TGGATGAGGCGGGTCACGGCGATCTGGGACGGAACCTaGTTCAAATCCAAGGCTGCTCTCAGAGTTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WMRRVTAIWDGT*FKSKAALRVAR Trigger: TCTGGCAACTCTGAGAGCAGCCTTGGATTTGAAGCAGGTTCCGTCCCAGATCGCCGTGACCCGCCTCATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | CTGCCTAACCTGGCCAATGTCACCCCTCTCAGCATGTaGATTCAACAAGGCCAGATACGTGTCTGGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPNLANVTPLSM*IQQGQIRVWAR Trigger: CCTGGCCCAGACACGTATCTGGCCTTGTTGAATGCACATGCTGAGAGGGGTGACATTGGCCAGGTTAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | TGCATATTCTCCTCTGAGCAGAGCAGCAGCAGGAGCTaGTTCAGGGCAGATCCTACAGGTTGGCCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CIFSSEQSSSRS*FRADPTGWPSA Trigger: AGCTGAAGGCCAACCTGTAGGATCTGCCCTGAAGCAGCTCCTGCTGCTGCTCTGCTCAGAGGAGAATATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CAA 90 bp | GCAATGGCACCGCATCTCTCTAAGAGAGCTCTGGCCTCATCCACCTaGCCTGAATCCACAAGCTGCAGGAATAGATCAGTGACGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AMAPHLSKRALASST*PESTSCRNRSVTGL Trigger: CAAGCCCGTCACTGATCTATTCCTGCAGCTTGTGGATTCAGGCAAGGTGGATGAGGCCAGAGCTCTCTTAGAGAGATGCGGTGCCATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS TCA 72 bp | GAGCAGCAGGTAAGTCACCCTTTTCCAGGTGCACAGTaGCCAACGGGAAGCTTATGTTGCTGGACGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EQQVSHPFPGAQ*PTGSLCCWTAL Trigger: CAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAAGGGTGACTTACCTGCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | AGTGACCAACGGGAAGCTTATGTTGCTGGACGGCTTTaGCAACCCAAGAGTCACGATGGCTTCATGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SDQREAYVAGRL*QPKSHDGFMQL Trigger: CAGCTGCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
||
| CDS CCA 72 bp | CTCAGCATGTGCATTCAACAAGGCCAGATACGTGTCTaGGCCAGGCTCAATGCCGGCCTGTTTCATCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSMCIQQGQIRV*ARLNAGLFHHC Trigger: ACAGTGATGAAACAGGCCGGCATTGAGCCTGGCCCAGACACGTATCTGGCCTTGTTGAATGCACATGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CAA 72 bp | CCGCAGTGTCCGCTCTCGAGGGATAATGTTCTCTTCTaGCATTTTGGTCCACGCAGCATCCGCTCTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PQCPLSRDNVLF*HFGPRSIRSLP Trigger: TGGCAAAGAGCGGATGCTGCGTGGACCAAAATGCAAGAAGAGAACATTATCCCTCGAGAGCGGACACTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CAA 90 bp | AAGTCACCCTTTTCCAGGTGCACAGTGACCAACGGGAAGCTTATGTaGCTGGACGGCTTTGCCAACCCAAGAGTCACGATGGCTTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: KSPFSRCTVTNGKLM*LDGFANPRVTMASC Trigger: GCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAAGGGTGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS TCA 72 bp | ACGTGCTCTCAAAGACTCTCTGCAGAAGCCCCTTTGTaGTGCGGCCTGTTCTCCGGACAGAATTATCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TCSQRLSAEAPL*CGLFSGQNYPV Trigger: GACTGGATAATTCTGTCCGGAGAACAGGCCGCATCACAAAGGGGCTTCTGCAGAGAGTCTTTGAGAGCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | GCTTCAAGAGCAGCAGGTAAGTCACCCTTTTCCAGGTaGACAGTGACCAACGGGAAGCTTATGTTGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASRAAGKSPFSR*TVTNGKLMLLD Trigger: GTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAAGGGTGACTTACCTGCTGCTCTTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | ACCACAACTCCGGAACGTCGAAAGGAACTTCCTGGTTaGTGGTTTTCAAGATCTCGGCTAAGAGCCGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TTTPERRKELPG*WFSRSRLRAAV Trigger: CACTGCGGCTCTTAGCCGAGATCTTGAAAACCAGCAACCAGGAAGTTCCTTTCGACGTTCCGGAGTTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | AAGCCCTTGATGTGGGTCTCAGCGAAATCCTTCACGTaGATTGCTTGGGTGAAGTCGTCCTTACTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KPLMWVSAKSFT*IAWVKSSLLSS Trigger: GCTGCTGAGTAAGGACGACTTCACCCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS GCA 72 bp | TGTCAAGTCCAGCCACCATTCTCTGAATGGCCTCTATaGTTTCCACATCACCCTTCAAGGCCAACGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CQVQPPFSEWPL*FPHHPSRPTPG Trigger: TCCAGGCGTTGGCCTTGAAGGGTGATGTGGAAAGCATAGAGGCCATTCAGAGAATGGTGGCTGGACTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CCA 72 bp | CAGGCTCCTCTTGAAGATCCCTTTTCTCAGCAACGATaGCATACAATCTGGCTTGGCTCAGACGCTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QAPLEDPFSQQR*HTIWLGSDALL Trigger: CAGGAGAGCGTCTGAGCCAAGCCAGATTGTATGCCATCGTTGCTGAGAAAAGGGATCTTCAAGAGGAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CCA 72 bp | ACAACTCCGGAACGTCGAAAGGAACTTCCTGGTTGCTaGTTTTCAAGATCTCGGCTAAGAGCCGCAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TTPERRKELPGC*FSRSRLRAAVS Trigger: GGACACTGCGGCTCTTAGCCGAGATCTTGAAAACCAGCAACCAGGAAGTTCCTTTCGACGTTCCGGAGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CCA 72 bp | CTGTTGGCAGCATCGTTCAGTGTGAAGCCCTTGATGTaGGTCTCAGCGAAATCCTTCACGTGCATTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLAASFSVKPLM*VSAKSFTCIAW Trigger: CCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTTCACACTGAACGATGCTGCCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CAA 72 bp | TTTTCCAGGTGCACAGTGACCAACGGGAAGCTTATGTaGCTGGACGGCTTTGCCAACCCAAGAGTCACGATG | + |
|
Preference number: 6 (lower is better) Translates to: FSRCTVTNGKLM*LDGFANPRVTM Trigger: CATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
||
| CDS CAA 72 bp | AGGAGGCTGTTGGCAGCATCGTTCAGTGTGAAGCCCTaGATGTGGGTCTCAGCGAAATCCTTCACGTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: RRLLAASFSVKP*MWVSAKSFTCI Trigger: AATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTTCACACTGAACGATGCTGCCAACAGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CAA 72 bp | CCGCATCTCTCTAAGAGAGCTCTGGCCTCATCCACCTaGCCTGAATCCACAAGCTGCAGGAATAGATCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PHLSKRALASST*PESTSCRNRSV Trigger: CACTGATCTATTCCTGCAGCTTGTGGATTCAGGCAAGGTGGATGAGGCCAGAGCTCTCTTAGAGAGATGCGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CAA 90 bp | GAAGCCCTTGATGTGGGTCTCAGCGAAATCCTTCACGTGCATTGCTaGGGTGAAGTCGTCCTTACTCAGCAGCAAGCCTATCAAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EALDVGLSEILHVHC*GEVVLTQQQAYQGA Trigger: AGCACCTTGATAGGCTTGCTGCTGAGTAAGGACGACTTCACCCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
||
| CDS CAA 90 bp | CTTATGATGAGGAGGCTGTTGGCAGCATCGTTCAGTGTGAAGCCCTaGATGTGGGTCTCAGCGAAATCCTTCACGTGCATTGCTTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LMMRRLLAASFSVKP*MWVSAKSFTCIAWV Trigger: CACCCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTTCACACTGAACGATGCTGCCAACAGCCTCCTCATCATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 90 bp | AGTCCATTGTTTTCCAGGTGCACAGTGACCAACGGGAAGCTTATGTaGCTGGACGGCTTTGCCAACCCAAGAGTCACGATGGCTTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SPLFSRCTVTNGKLM*LDGFANPRVTMASC Trigger: GCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAACAATGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS CAA 90 bp | AGCCGCAGTGTCCGCTCTCGAGGGATAATGTTCTCTTCTTGCATTTaGGTCCACGCAGCATCCGCTCTTTGCCAGTCACTGCTTATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRSVRSRGIMFSSCI*VHAASALCQSLLIL Trigger: CAAAATAAGCAGTGACTGGCAAAGAGCGGATGCTGCGTGGACCAAAATGCAAGAAGAGAACATTATCCCTCGAGAGCGGACACTGCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | TCCATCACTGCTTTTGCCAAAGCTGTCCTATTGGCTTaGAGAGCACAGTGCAGCGTGAACTGCAGTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SITAFAKAVLLA*RAQCSVNCSEE Trigger: CTCCTCACTGCAGTTCACGCTGCACTGTGCTCTTCAAGCCAATAGGACAGCTTTGGCAAAAGCAGTGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 72 bp | GCAAATCCAGAGTCACACAGTGCCGCAAAAAGAAACTaGCAAAGTTATCGGAGCTCTCGTCCTTGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ANPESHSAAKRN*QSYRSSRPWTG Trigger: CCCTGTCCAAGGACGAGAGCTCCGATAACTTTGGCAGTTTCTTTTTGCGGCACTGTGTGACTCTGGATTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 72 bp | AGCAGCAGGAGCTGCTTCAGGGCAGATCCTACAGGTTaGCCTTCAGCTTTGAGTTTCTCAAGTGTTGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSCFRADPTG*PSALSFSSVDS Trigger: GGAATCAACACTTGAGAAACTCAAAGCTGAAGGCCAACCTGTAGGATCTGCCCTGAAGCAGCTCCTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 72 bp | GTCCAATCGTGTCAAGTCCAGCCACCATTCTCTGAATaGCCTCTATGCTTTCCACATCACCCTTCAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VQSCQVQPPFSE*PLCFPHHPSRP Trigger: TGGCCTTGAAGGGTGATGTGGAAAGCATAGAGGCCATTCAGAGAATGGTGGCTGGACTTGACACGATTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 90 bp | TGCTCTCAGAGTTGCCAGAGCCCCTTTCAAATAATCCCGCCTAACTaGCCTTATGATGAGGAGGCTGTTGGCAGCATCGTTCAGTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSQSCQSPFQIIPPN*PYDEEAVGSIVQCE Trigger: TTCACACTGAACGATGCTGCCAACAGCCTCCTCATCATAAGGCAAGTTAGGCGGGATTATTTGAAAGGGGCTCTGGCAACTCTGAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | GAGAGTCCAATCGTGTCAAGTCCAGCCACCATTCTCTaGATGGCCTCTATGCTTTCCACATCACCCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ESPIVSSPATIL*MASMLSTSPFK Trigger: CTTGAAGGGTGATGTGGAAAGCATAGAGGCCATTCAGAGAATGGTGGCTGGACTTGACACGATTGGACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | TTGGCTCACAAAGTCCATTGTTTTCCAGGTGCACAGTaGCCAACGGGAAGCTTATGTTGCTGGACGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAHKVHCFPGAQ*PTGSLCCWTAL Trigger: CAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAACAATGGACTTTGTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS CCA 72 bp | TCTGACTTCTCCACTTTCTCCAGAATCTGCCTAACCTaGCCAATGTCACCCCTCTCAGCATGTGCATTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SDFSTFSRICLT*PMSPLSACAFN Trigger: GTTGAATGCACATGCTGAGAGGGGTGACATTGGCCAGGTTAGGCAGATTCTGGAGAAAGTGGAGAAGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 72 bp | AGTTGCCAGAGCCCCTTTCAAATAATCCCGCCTAACTaGCCTTATGATGAGGAGGCTGTTGGCAGCATCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SCQSPFQIIPPN*PYDEEAVGSIV Trigger: AACGATGCTGCCAACAGCCTCCTCATCATAAGGCAAGTTAGGCGGGATTATTTGAAAGGGGCTCTGGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | CCTTGCCTGAATCCACAAGCTGCAGGAATAGATCAGTaGCGGGCTTGTAAAGTGCAAACTGATTCGCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: PCLNPQAAGIDQ*RACKVQTDSPF Trigger: GAATGGCGAATCAGTTTGCACTTTACAAGCCCGTCACTGATCTATTCCTGCAGCTTGTGGATTCAGGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 72 bp | GTAGGCAGCTATCAGCCTCTGGTATGTTACTCGATTTaGTTGGATGTTTGCTCCCTCCATCTTTGCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGSYQPLVCYSI*LDVCSLHLCQE Trigger: TTCCTGGCAAAGATGGAGGGAGCAAACATCCAACCAAATCGAGTAACATACCAGAGGCTGATAGCTGCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 72 bp | GACAGAATTATCCAGTCTCATCAGAGCCCAGTCAAATaGACTGCTGTTCTTTCTCACAGGAGCAGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DRIIQSHQSPVK*TAVLSHRSRLL Trigger: GAGGAGCCTGCTCCTGTGAGAAAGAACAGCAGTCAATTTGACTGGGCTCTGATGAGACTGGATAATTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 72 bp | GAAAATAGCCAACAGCTTCCGCTGGTCCCGGAGGCTTaGAGCAATAGCGTTCATCCTTGTACAACAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ENSQQLPLVPEA*SNSVHPCTTIL Trigger: CAGAATTGTTGTACAAGGATGAACGCTATTGCTCAAAGCCTCCGGGACCAGCGGAAGCTGTTGGCTATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 90 bp | TGGAGTCTGCTGTGCTTTCCCAGTACTTTTACAAGGGCTACGTACTaGGCAGTGTCAAGAATAGCCGAAGCATCTAAGCGGTCAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WSLLCFPSTFTRATY*AVSRIAEASKRSTS Trigger: AGAAGTTGACCGCTTAGATGCTTCGGCTATTCTTGACACTGCCAAGTACGTAGCCCTTGTAAAAGTACTGGGAAAGCACAGCAGACTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS CAA 90 bp | GAAAGCAAAGAAGAGGTCGTAGAGCATCGTCATCTCCCCTTGTTCTaGGCTCACAAAGTCCATTGCTTTCTGGATCAAATCAGTCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ESKEEVVEHRHLPLF*AHKVHCFLDQISLA Trigger: GGCGAGACTGATTTGATCCAGAAAGCAATGGACTTTGTGAGCCAAGAACAAGGGGAGATGACGATGCTCTACGACCTCTTCTTTGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 90 bp | CTGCAGGAAAGCAAAGAAGAGGTCGTAGAGCATCGTCATCTCCCCTaGTTCTTGGCTCACAAAGTCCATTGCTTTCTGGATCAAATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LQESKEEVVEHRHLP*FLAHKVHCFLDQIS Trigger: ACTGATTTGATCCAGAAAGCAATGGACTTTGTGAGCCAAGAACAAGGGGAGATGACGATGCTCTACGACCTCTTCTTTGCTTTCCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | ACAGAATTATCCAGTCTCATCAGAGCCCAGTCAAATTaGCTGCTGTTCTTTCTCACAGGAGCAGGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TELSSLIRAQSN*LLFFLTGAGSS Trigger: AGAGGAGCCTGCTCCTGTGAGAAAGAACAGCAGTCAATTTGACTGGGCTCTGATGAGACTGGATAATTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | AAAATAGCCAACAGCTTCCGCTGGTCCCGGAGGCTTTaGGCAATAGCGTTCATCCTTGTACAACAATTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KIANSFRWSRRL*AIAFILVQQFC Trigger: ACAGAATTGTTGTACAAGGATGAACGCTATTGCTCAAAGCCTCCGGGACCAGCGGAAGCTGTTGGCTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | GCTTCAGGGCAGATCCTACAGGTTGGCCTTCAGCTTTaGGTTTCTCAAGTGTTGATTCCAAATCAGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASGQILQVGLQL*VSQVLIPNQMR Trigger: CCTCATCTGATTTGGAATCAACACTTGAGAAACTCAAAGCTGAAGGCCAACCTGTAGGATCTGCCCTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 72 bp | CTCTCGTCCTTGGACAGGGGTAATGCCAATAAAACCTaGAACGCAGTGTCTTCTAACTTCTCAGTGGCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSSLDRGNANKT*NAVSSNFSVAK Trigger: TTTAGCCACTGAGAAGTTAGAAGACACTGCGTTCCAGGTTTTATTGGCATTACCCCTGTCCAAGGACGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CCA 72 bp | TGTTGCTGGACGGCTTTGCCAACCCAAGAGTCACGATaGCTTCATGCAGCTGTTTTACTGTTTCAATTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CCWTALPTQESR*LHAAVLLFQFH Trigger: GTGAAATTGAAACAGTAAAACAGCTGCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS CAA 72 bp | GAAGAGGTCGTAGAGCATCGTCATCTCCCCTTGTTCTaGGCTCACAAAGTCCATTGCTTTCTGGATCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: EEVVEHRHLPLF*AHKVHCFLDQI Trigger: GATTTGATCCAGAAAGCAATGGACTTTGTGAGCCAAGAACAAGGGGAGATGACGATGCTCTACGACCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 72 bp | AGCAAAGAAGAGGTCGTAGAGCATCGTCATCTCCCCTaGTTCTTGGCTCACAAAGTCCATTGTTTTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SKEEVVEHRHLP*FLAHKVHCFPG Trigger: ACCTGGAAAACAATGGACTTTGTGAGCCAAGAACAAGGGGAGATGACGATGCTCTACGACCTCTTCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160011.2 |
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| CDS GCA 72 bp | AATTATCCAGTCTCATCAGAGCCCAGTCAAATTGACTaGTGTTCTTTCTCACAGGAGCAGGCTCCTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NYPVSSEPSQID*CSFSQEQAPLE Trigger: TTCAAGAGGAGCCTGCTCCTGTGAGAAAGAACAGCAGTCAATTTGACTGGGCTCTGATGAGACTGGATAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 72 bp | GCAAAGGTACTACTTGCGAGGAGACATTCATTTTCCTaGAAAGCAGCTCGAACTGACTGTGCACTATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AKVLLARRHSFS*KAARTDCALSK Trigger: CTTTGATAGTGCACAGTCAGTTCGAGCTGCTTTGCAGGAAAATGAATGTCTCCTCGCAAGTAGTACCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 72 bp | TGCTTCAGGGCAGATCCTACAGGTTGGCCTTCAGCTTaGAGTTTCTCAAGTGTTGATTCCAAATCAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: CFRADPTGWPSA*SFSSVDSKSDE Trigger: CTCATCTGATTTGGAATCAACACTTGAGAAACTCAAAGCTGAAGGCCAACCTGTAGGATCTGCCCTGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | GAGGAGACATTCATTTTCCTGCAAAGCAGCTCGAACTaGCTGTGCACTATCAAAGCACGGAAACACATAGTT | + |
|
Preference number: 6 (lower is better) Translates to: EETFIFLQSSSN*LCTIKARKHIV Trigger: AACTATGTGTTTCCGTGCTTTGATAGTGCACAGTCAGTTCGAGCTGCTTTGCAGGAAAATGAATGTCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | ATGTTTTCAGGAACTTTAACATTCATCTCCTGCAGCTaGTGGAAGTATTGTCTCAAACGCTCCTCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MFSGTLTFISCS*WKYCLKRSSLA Trigger: GGCCAAGGAGGAGCGTTTGAGACAATACTTCCATCAGCTGCAGGAGATGAATGTTAAAGTTCCTGAAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | ATCACTTTTCTGAATAGATACGACAAGCCAAAGTACTaGGGTTCTATGGCTTGGTTCTCGGAAGCAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ITFLNRYDKPKY*GSMAWFSEASR Trigger: CCTGCTTGCTTCCGAGAACCAAGCCATAGAACCTCAGTACTTTGGCTTGTCGTATCTATTCAGAAAAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | CTAGCGCTGGTTCCATCTGCTCTTCGATCACTTTTCTaGATAGATACGACAAGCCAAAGTACTGAGGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LALVPSALRSLF*IDTTSQSTEVL Trigger: TAGAACCTCAGTACTTTGGCTTGTCGTATCTATTCAGAAAAGTGATCGAAGAGCAGATGGAACCAGCGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 72 bp | TTCATTCTTCACTTCAGCTTGAGCAAAGGTACTACTTaGGAGGAGACATTCATTTTCCTGCAAAGCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: FILHFSLSKGTT*EETFIFLQSSS Trigger: CGAGCTGCTTTGCAGGAAAATGAATGTCTCCTCGCAAGTAGTACCTTTGCTCAAGCTGAAGTGAAGAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 72 bp | GACGGCTTTGCCAACCCAAGAGTCACGATGGCTTCATaGAGCTGTTTTACTGTTTCAATTTCACCTCTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: DGFANPRVTMAS*SCFTVSISPLK Trigger: TTTAAGAGGTGAAATTGAAACAGTAAAACAGCTGCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS GCA 72 bp | TCTTCTTGCATTTTGGTCCACGCAGCATCCGCTCTTTaGCAGTCACTGCTTATTTTGTATAGCTTCAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSCILVHAASAL*QSLLILYSFSK Trigger: CTTACTGAAGCTATACAAAATAAGCAGTGACTGGCAAAGAGCGGATGCTGCGTGGACCAAAATGCAAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 72 bp | CTTCATTCTTCACTTCAGCTTGAGCAAAGGTACTACTaGCGAGGAGACATTCATTTTCCTGCAAAGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHSSLQLEQRYY*RGDIHFPAKQL Trigger: GAGCTGCTTTGCAGGAAAATGAATGTCTCCTCGCAAGTAGTACCTTTGCTCAAGCTGAAGTGAAGAATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | CTGGGCCAAAGCGATGTTATTGATAAAAACCATTTTTaGGAGTCCAATCGTGTCAAGTCCAGCCACCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGQSDVIDKNHF*ESNRVKSSHHS Trigger: AGAATGGTGGCTGGACTTGACACGATTGGACTCTCAAAAATGGTTTTTATCAATAACATCGCTTTGGCCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 72 bp | TTTTGGTCCACGCAGCATCCGCTCTTTGCCAGTCACTaGTTATTTTGTATAGCTTCAGTAAGTTGTAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: FWSTQHPLFASH*LFCIASVSCST Trigger: TGTACTACAACTTACTGAAGCTATACAAAATAAGCAGTGACTGGCAAAGAGCGGATGCTGCGTGGACCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 72 bp | GACATGATGCTTAACTTCTCTAGCGCTGGTTCCATCTaGTCTTCGATCACTTTTCTGAATAGATACGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: DMMLNFSSAGSI*SSITFLNRYDK Trigger: CTTGTCGTATCTATTCAGAAAAGTGATCGAAGAGCAGATGGAACCAGCGCTAGAGAAGTTAAGCATCATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS GCA 72 bp | TCCTTTAGAATGTTAATAGCATCTTGGAGTCTGCTGTaGTTTCCCAGTACTTTTACAAGGGCTACGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFRMLIASWSLL*FPSTFTRATYL Trigger: CAAGTACGTAGCCCTTGTAAAAGTACTGGGAAAGCACAGCAGACTCCAAGATGCTATTAACATTCTAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS GCA 72 bp | CCGAGGCCACATCTTTGTCTAAGGCATAGCTTTTCATaGTGCAAGAATATACTTTATCGTTATCACGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: PRPHLCLRHSFS*CKNILYRYHVT Trigger: AGTTACGTGATAACGATAAAGTATATTCTTGCAGCATGAAAAGCTATGCCTTAGACAAAGATGTGGCCTCGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS CAA 90 bp | TGCAGCTGTTTTACTGTTTCAATTTCACCTCTTAAAGCTGCACCATaGAGGATGTGGAAAAAGGACAAGACTGTTGCATCTTTGATAACA | + |
|
Preference number: 6 (lower is better) Translates to: CSCFTVSISPLKAAP*RMWKKDKTVASLIT Trigger: TGTTATCAAAGATGCAACAGTCTTGTCCTTTTTCCACATCCTCAATGGTGCAGCTTTAAGAGGTGAAATTGAAACAGTAAAACAGCTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS CAA 90 bp | TCGGCTTTAAGGAAGATATTATATGCATCTTTACTCTTCTTTAGTTaGCAGTTAGACAACAACGTCTTCTCAGTAACGTCCTCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SALRKILYASLLFFS*QLDNNVFSVTSSPA Trigger: AGCAGGAGAGGACGTTACTGAGAAGACGTTGTTGTCTAACTGCAAACTAAAGAAGAGTAAAGATGCATATAATATCTTCCTTAAAGCCGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112308.9 |
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| CDS TCA 72 bp | TTACTGTTTCAATTTCACCTCTTAAAGCTGCACCATTaGGGATGTGGAAAAAGGACAAGACTGTTGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLFQFHLLKLHH*GCGKRTRLLHL Trigger: AAGATGCAACAGTCTTGTCCTTTTTCCACATCCTCAATGGTGCAGCTTTAAGAGGTGAAATTGAAACAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS CCA 72 bp | TTCTCTTTCATCTCCTTTAGAATGTTAATAGCATCTTaGAGTCTGCTGTGCTTTCCCAGTACTTTTACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSFISFRMLIAS*SLLCFPSTFTR Trigger: CCTTGTAAAAGTACTGGGAAAGCACAGCAGACTCCAAGATGCTATTAACATTCTAAAGGAGATGAAAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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| CDS CAA 72 bp | TTTACTGTTTCAATTTCACCTCTTAAAGCTGCACCATaGAGGATGTGGAAAAAGGACAAGACTGTTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: FTVSISPLKAAP*RMWKKDKTVAS Trigger: AGATGCAACAGTCTTGTCCTTTTTCCACATCCTCAATGGTGCAGCTTTAAGAGGTGAAATTGAAACAGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112308.9 ENSMUST00000160011.2 |
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