Pregenerated sensors for LRPAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029103Ensembl transcript IDs: ENSMUST00000030986.15, ENSMUST00000153664.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAAGATATCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTaGATGGTGGCAGACACAGCATGGGTGAGGGAACCACACTGCCTA | + |
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Preference number: 1 (lower is better) Translates to: GKISTSAQRDTSQLA*MVADTAWVREPHCL Trigger: TAGGCAGTGTGGTTCCCTCACCCATGCTGTGTCTGCCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGATATCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR TCA 90 bp | AGGCACAGGAGGCTTTGGTGTTGGGCTGAACCAGAAAGGCAGAGCTaGGACCCTAGCAACAAGAATTTCTCTGAGCCTCAGACACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: RHRRLWCWAEPERQS*DPSNKNFSEPQTLL Trigger: CAGCAGTGTCTGAGGCTCAGAGAAATTCTTGTTGCTAGGGTCTCAGCTCTGCCTTTCTGGTTCAGCCCAACACCAAAGCCTCCTGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR GCA 90 bp | CCCATCCTTCGAGATACCAGGCAAGGACTCGAGGGCTCAAAACTCTaGCATGTATTTAAGGACTCTGTACAGAATGTTTCCAGTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: PILRDTRQGLEGSKL*HVFKDSVQNVSSGR Trigger: CCTGCCACTGGAAACATTCTGTACAGAGTCCTTAAATACATGGCAGAGTTTTGAGCCCTCGAGTCCTTGCCTGGTATCTCGAAGGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR CCA 90 bp | TATGTTACTTCAACGTGCCCATTTCTAAGCCTTAGCATGCAGCCATaGCCTCTGGCTCTAGGGATGGAGACAAACATTAGTGAAGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: YVTSTCPFLSLSMQP*PLALGMETNISEGA Trigger: TGCACCTTCACTAATGTTTGTCTCCATCCCTAGAGCCAGAGGCCATGGCTGCATGCTAAGGCTTAGAAATGGGCACGTTGAAGTAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR GCA 90 bp | GTATCTATGAGTGGTCACCTGTGTACAGGTACACATGTAAGTGTATaGACACATCAGAGAGTGGGAGAGTGCCTTCTCCCATATACTCCA | + |
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Preference number: 1 (lower is better) Translates to: VSMSGHLCTGTHVSV*THQRVGECLLPYTP Trigger: TGGAGTATATGGGAGAAGGCACTCTCCCACTCTCTGATGTGTGCATACACTTACATGTGTACCTGTACACAGGTGACCACTCATAGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR TCA 90 bp | TTAAGGACTCTGTACAGAATGTTTCCAGTGGCAGGCAGGTTTATGTaGTTTCAATATAAACTGTTGTGCTGCAGCTCGGAGTCCAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LRTLYRMFPVAGRFM*FQYKLLCCSSESSP Trigger: AGGACTGGACTCCGAGCTGCAGCACAACAGTTTATATTGAAATCACATAAACCTGCCTGCCACTGGAAACATTCTGTACAGAGTCCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR TCA 90 bp | AGCAAGGCTCTGCAGATCCAAACTGTAGACCTCAAGCTTGCTGTATaGACATTTTACTCACTGAGCCTCTTTCCGGCTGTGATATTCTTA | + |
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Preference number: 1 (lower is better) Translates to: SKALQIQTVDLKLAV*TFYSLSLFPAVIFL Trigger: TAAGAATATCACAGCCGGAAAGAGGCTCAGTGAGTAAAATGTTCATACAGCAAGCTTGAGGTCTACAGTTTGGATCTGCAGAGCCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCACCCAGCTGGCCTGGATaGTGGCAGACACAGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: CSLRFPCGGSHTHPGKFAPSWPG*WQTQHG Trigger: CCCATGCTGTGTCTGCCACCATCCAGGCCAGCTGGG...TGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAGCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR TCA 90 bp | TGGTATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGTCTATGCAAGCCGATaGCATGCTGACAGCTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: WYFKGSSLPRWSATPVTSVYASR*HADSSR Trigger: CCGGGAGCTGTCAGCATGTCATCGGCTTGCATAGAC...TGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAACATCCCAGCTGGCCTaGATGGTGGCAGACACAGCA | + |
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Preference number: 2 (lower is better) Translates to: CSLRFPCGGSHTHPGKFATSQLA*MVADTA Trigger: TGCTGTGTCTGCCACCATCCAGGCCAGCTGGGATGT...TGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGCCTGGATGGTGGCAGACACAGCATGGGTGAGGGAACCACACTGCCTAAACAGAGACTGGATCTaGAAGCTGATCAGGGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QLAWMVADTAWVREPHCLNRDWI*KLIRVF Trigger: AAAGACCCTGATCAGCTTCCAGATCCAGTCTCTGTT...TAGGCAGTGTGGTTCCCTCACCCATGCTGTGTCTGCCACCATCCAGGCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR CAA 90 bp | GCGGTACCCAAGGCCCTCGTCCAGGGTGGTGACAACTACACTTGCTaGAAAGAAAATAAGTCCTTGCCAGCCACTGTAGGATCAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: AVPKALVQGGDNYTC*KENKSLPATVGSAW Trigger: CCAAGCTGATCCTACAGTGGCTGGCAAGGACTTATTTTCTTTCAAGCAAGTGTAGTTGTCACCACCCTGGACGAGGGCCTTGGGTACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAGGATCTTTGGCTATTCTGTGTaGGGGAACAGAGACTGGATC | + |
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Preference number: 2 (lower is better) Translates to: LEVPLRWESHSPREVCRIFGYSV*GNRDWI Trigger: GATCCAGTCTCTGTTCCCTCACACAGAATAGCCAAA...GATCCTGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAACAAACTCAATGGCCTaGTCTTCCAGGATCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: CSLRFPCGGSHTHPGKFATNSMA*SSRISC Trigger: GCAGCTGATCCTGGAAGATCAGGCCATTGAGTTTGT...TGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAGGATCCAACAAGAATTTCTCTaGGCCTCAGACACTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LEVPLRWESHSPREVCRIQQEFL*ASDTAE Trigger: CTCAGCAGTGTCTGAGGCTCAGAGAAATTCTTGTTG...GATCCTGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTGTGAGGCACAGGAGGCTTTGGTGTTGGGCTGAACCAGAAAGGCAGAGCACACATGTAAGTGTATaGACACATCAGAGAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: WAVRHRRLWCWAEPERQSTHVSV*THQRVG Trigger: TCCCACTCTCTGATGTGTGCATACACTTACATGTGT...GCTCTGCCTTTCTGGTTCAGCCCAACACCAAAGCCTCCTGTGCCTCACAGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAGGATCTGTCCTGAAATCTCTTaGTTTAAAACTGTCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LEVPLRWESHSPREVCRICPEIS*FKTVWG Trigger: GCCCCAGACAGTTTTAAATCAAGAGATTTCAGGACA...GATCCTGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR TCA 90 bp | GGAAGATATCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTGGATGGTGGCTCAAGCTTGCTGTATaGACATTTTACTCACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GRYLLVLRGTHPSWPGWWLKLAV*TFYSLS Trigger: GCTCAGTGAGTAAAATGTTCATACAGCAAGCTTGAG...CCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGATATCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR CCA 90 bp | GGAAGATATCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTGGATGGTGGATGAGTATCTATGAGTaGTCACCTGTGTACAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: GRYLLVLRGTHPSWPGWWMSIYE*SPVYRY Trigger: GTACCTGTACACAGGTGACCACTCATAGATACTCAT...CCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGATATCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR CAA 90 bp | GAGAGTGGGAGAGTGCCTTCTCCCATATACTCCACCTTTGTTTATTaGGCTGGGATAAACTTTCTCTGCCTCTCAAGTGCTGGGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: ESGRVPSPIYSTFVY*AGINFLCLSSAGTA Trigger: TGCAGTCCCAGCACTTGAGAGGCAGAGAAAGTTTATCCCAGCCAAATAAACAAAGGTGGAGTATATGGGAGAAGGCACTCTCCCACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAGGATCGGTGACAACTACACTTaGTTGAAAGAAAATAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LEVPLRWESHSPREVCRIGDNYT*LKENKS Trigger: GGACTTATTTTCTTTCAAGCAAGTGTAGTTGTCACC...GATCCTGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAGGATCTGTAGACCTCAAGCTTaGTGTATGAACATTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: LEVPLRWESHSPREVCRICRPQA*CMNILL Trigger: GAGTAAAATGTTCATACAGCAAGCTTGAGGTCTACA...GATCCTGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR CAA 90 bp | GTCCAGGGTGGTGACAACTACACTTGCTTGAAAGAAAATAAGTCCTaGCCAGCCACTGTAGGATCAGCTTGGTATTTCAAGGGATCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VQGGDNYTCLKENKS*PATVGSAWYFKGSS Trigger: GGAGGATCCCTTGAAATACCAAGCTGATCCTACAGTGGCTGGCAAGGACTTATTTTCTTTCAAGCAAGTGTAGTTGTCACCACCCTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| 3UTR-3UTR GCA 90 bp | CCATATATGAGTATCTATGAGTGGTCACCTGTGTACAGGTACACATGTAAGTGTGCAGGCTTTCACCTCTaGCATCTTTGTCCTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: PYMSIYEWSPVYRYTCKCAGFHL*HLCPEI Trigger: GATTTCAGGACAAAGATGGCAGAGGTGAAAGCCTGC...ACACTTACATGTGTACCTGTACACAGGTGACCACTCATAGATACTCATATATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR CCA 90 bp | CCATATATGAGTATCTATGAGTGGTCACCTGTGTACAGGTACACATGTAAGTGTGGTCAGACAAAATTTTaGCTATTCTGTGTGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PYMSIYEWSPVYRYTCKCGQTKF*LFCVRE Trigger: TTCCCTCACACAGAATAGCCAAAATTTTGTCTGACC...ACACTTACATGTGTACCTGTACACAGGTGACCACTCATAGATACTCATATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR-3UTR CAA 90 bp | CTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAGGATCGCACTCCCCCAGCAGTaGACTCTGAGCCTGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LEVPLRWESHSPREVCRIALPQQ*TLSLSP Trigger: GGGACTCAGGCTCAGAGTCAACTGCTGGGGGAGTGC...GATCCTGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR CCA 72 bp | ACATCCCAGCTGGCCTGGATGGTGGCAGACACAGCATaGGTGAGGGAACCACACTGCCTACTGTTCCTTGCG | + |
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Preference number: 3 (lower is better) Translates to: TSQLAWMVADTA*VREPHCLLFLA Trigger: CGCAAGGAACAGTAGGCAGTGTGGTTCCCTCACCCATGCTGTGTCTGCCACCATCCAGGCCAGCTGGGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR CCA 72 bp | TCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTaGATGGTGGCAGACACAGCATGGGTGAGGGAACCA | + |
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Preference number: 3 (lower is better) Translates to: STSAQRDTSQLA*MVADTAWVREP Trigger: TGGTTCCCTCACCCATGCTGTGTCTGCCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR GCA 72 bp | ATGGTGGCAGACACAGCATGGGTGAGGGAACCACACTaGCTACTGTTCCTTGCGGCTGCTGTCCTTAACCCA | + |
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Preference number: 3 (lower is better) Translates to: MVADTAWVREPH*LLFLAAAVLNP Trigger: TGGGTTAAGGACAGCAGCCGCAAGGAACAGTAGGCAGTGTGGTTCCCTCACCCATGCTGTGTCTGCCACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR TCA 72 bp | CAGCCACACCAGTCACCTCAGGTCTATGCAAGCCGATaGCATGCTGACAGCTCCCGGTGTCTTCAAGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: QPHQSPQVYASR*HADSSRCLQVF Trigger: GAACACTTGAAGACACCGGGAGCTGTCAGCATGTCATCGGCTTGCATAGACCTGAGGTGACTGGTGTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCCTCTGGCTCTAGGGATGGAGACAAACATTAGTGAAGGTGCATCTGACAGCACTGCCTACTGTTCCTaGCGGCTGCTGTCCTTAACC | + |
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Preference number: 3 (lower is better) Translates to: WPLALGMETNISEGASDSTAYCS*RLLSLT Trigger: GGTTAAGGACAGCAGCCGCAAGGAACAGTAGGCAGT...GCTGTCAGATGCACCTTCACTAATGTTTGTCTCCATCCCTAGAGCCAGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR GCA 72 bp | TTCCTTGCGGCTGCTGTCCTTAACCCATGGGCTTCTTaGACGATGATGCCCTGGGAGTTTCACCCATATATG | + |
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Preference number: 3 (lower is better) Translates to: FLAAAVLNPWAS*TMMPWEFHPYM Trigger: CATATATGGGTGAAACTCCCAGGGCATCATCGTGCAAGAAGCCCATGGGTTAAGGACAGCAGCCGCAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR TCA 72 bp | AGGCTTTGGTGTTGGGCTGAACCAGAAAGGCAGAGCTaGGACCCTAGCAACAAGAATTTCTCTGAGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: RLWCWAEPERQS*DPSNKNFSEPQ Trigger: CTGAGGCTCAGAGAAATTCTTGTTGCTAGGGTCTCAGCTCTGCCTTTCTGGTTCAGCCCAACACCAAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR TCA 72 bp | CTCCTTTACCATAATGTGACTGGTGACCTGTCAGCCTaGGGACTTTCAGTCACTGTTGCTAGGTGGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LLYHNVTGDLSA*GLSVTVARWQS Trigger: GCTCTGCCACCTAGCAACAGTGACTGAAAGTCCTCAGGCTGACAGGTCACCAGTCACATTATGGTAAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR GCA 72 bp | CCCAAGGCCCTCGTCCAGGGTGGTGACAACTACACTTaGTTGAAAGAAAATAAGTCCTTGCCAGCCACTGTA | + |
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Preference number: 3 (lower is better) Translates to: PKALVQGGDNYT*LKENKSLPATV Trigger: TACAGTGGCTGGCAAGGACTTATTTTCTTTCAAGCAAGTGTAGTTGTCACCACCCTGGACGAGGGCCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| 3UTR GCA 72 bp | AGTGGTCACCTGTGTACAGGTACACATGTAAGTGTATaGACACATCAGAGAGTGGGAGAGTGCCTTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SGHLCTGTHVSV*THQRVGECLLP Trigger: TGGGAGAAGGCACTCTCCCACTCTCTGATGTGTGCATACACTTACATGTGTACCTGTACACAGGTGACCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR CCA 72 bp | TCAACGTGCCCATTTCTAAGCCTTAGCATGCAGCCATaGCCTCTGGCTCTAGGGATGGAGACAAACATTAGT | + |
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Preference number: 3 (lower is better) Translates to: STCPFLSLSMQP*PLALGMETNIS Trigger: ACTAATGTTTGTCTCCATCCCTAGAGCCAGAGGCCATGGCTGCATGCTAAGGCTTAGAAATGGGCACGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR TCA 72 bp | CTGCAGATCCAAACTGTAGACCTCAAGCTTGCTGTATaGACATTTTACTCACTGAGCCTCTTTCCGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LQIQTVDLKLAV*TFYSLSLFPAV Trigger: CACAGCCGGAAAGAGGCTCAGTGAGTAAAATGTTCATACAGCAAGCTTGAGGTCTACAGTTTGGATCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR GCA 72 bp | CGAGATACCAGGCAAGGACTCGAGGGCTCAAAACTCTaGCATGTATTTAAGGACTCTGTACAGAATGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: RDTRQGLEGSKL*HVFKDSVQNVS Trigger: GGAAACATTCTGTACAGAGTCCTTAAATACATGGCAGAGTTTTGAGCCCTCGAGTCCTTGCCTGGTATCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR GCA 72 bp | CTCTTTCCGGCTGTGATATTCTTAAACATGGTTAACTaGGCACCCCTGATAGGCAGATTCCAATTTCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LFPAVIFLNMVN*APLIGRFQFLG Trigger: GCCCAGAAATTGGAATCTGCCTATCAGGGGTGCGCAGTTAACCATGTTTAAGAATATCACAGCCGGAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR GCA 72 bp | CATGTAAGTGTATGCACACATCAGAGAGTGGGAGAGTaGCTTCTCCCATATACTCCACCTTTGTTTATTTGG | + |
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Preference number: 3 (lower is better) Translates to: HVSVCTHQRVGE*LLPYTPPLFIW Trigger: CCAAATAAACAAAGGTGGAGTATATGGGAGAAGGCACTCTCCCACTCTCTGATGTGTGCATACACTTACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| 3UTR CCA 72 bp | AACATAGCTGTGGGCTCTCTATCACTCACTCTGAGATaGTTCACTGGGCTGTATACTGCTATGTTACTTCAA | + |
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Preference number: 3 (lower is better) Translates to: NIAVGSLSLTLR*FTGLYTAMLLQ Trigger: TTGAAGTAACATAGCAGTATACAGCCCAGTGAACCATCTCAGAGTGAGTGATAGAGAGCCCACAGCTATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR TCA 90 bp | TGTAGCTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCACATAGCCCTGGTGGCTaGCCTTCCGCAGGCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CSLRFPCGGSHTHPGKFAHSPGG*PSAGGP Trigger: TGGACCGCCTGCGGAAGGTCAGCCACCAGGGCTATG...TGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAGCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR TCA 90 bp | TATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCATAGCCCTGGTGGCTaGCCTTCCGCAGGCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: YFKGSSLPRWSATPVTSGHSPGG*PSAGGP Trigger: TGGACCGCCTGCGGAAGGTCAGCCACCAGGGCTATG...ACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS-3UTR GCA 90 bp | GGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCAAGTCTCTCGCGAGTACTTaGCGCCATGGCCTGCTATGG | + |
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Preference number: 4 (lower is better) Translates to: GSSLPRWSATPVTSGLCKSLAST*RHGLLW Trigger: CCATAGCAGGCCATGGCGGCAAGTACTCGCGAGAGA...CTTGCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR GCA 90 bp | CAGCTGGCCTGGATGGTGGCAGACACAGCATGGGTGAGGGAACCACACTGCCTAATCTTCAGGTCAGAATaGAGCTCGGCCAGCCTCACA | + |
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Preference number: 4 (lower is better) Translates to: QLAWMVADTAWVREPHCLIFRSE*SSASLT Trigger: TGTGAGGCTGGCCGAGCTGCATTCTGACCTGAAGAT...TAGGCAGTGTGGTTCCCTCACCCATGCTGTGTCTGCCACCATCCAGGCCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CCA 90 bp | GGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCAAGGCCTTCTCCCATAGCTaGTTCAGCTTCTCCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: GSSLPRWSATPVTSGLCKAFSHS*FSFSMR Trigger: CCGCATGGAGAAGCTGAACCAGCTATGGGAGAAGGC...CTTGCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR GCA 90 bp | TGGTATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCATTGAGGGCGTTGCTGTaGACCATCTGGGCGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: WYFKGSSLPRWSATPVTSLRALL*TIWASF Trigger: GAAGGACGCCCAGATGGTGCACAGCAACGCCCTCAA...TGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CCA 90 bp | TGGGCTGTGAGGCACAGGAGGCTTTGGTGTTGGGCTGAACCAGAAAGGCAGAGCACAGATGAAGCCGCTTaGCCTTCTCCCATAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAVRHRRLWCWAEPERQSTDEAA*PSPIAG Trigger: ACCAGCTATGGGAGAAGGCCAAGCGGCTTCATCTGT...GCTCTGCCTTTCTGGTTCAGCCCAACACCAAAGCCTCCTGTGCCTCACAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR CCA 90 bp | GGAAGATATCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTGGATGGTGGTTGCTGTGCACCATCTaGGCGTCCTTCCTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GRYLLVLRGTHPSWPGWWLLCTI*ASFLPS Trigger: GGATGGGAGGAAGGACGCCCAGATGGTGCACAGCAA...CCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGATATCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CCA 90 bp | TGGTATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCATCCCCCAGCTCATCCTaGGTGTCTTCATTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WYFKGSSLPRWSATPVTSSPSSS*VSSLRA Trigger: CGCCCTCAATGAAGACACCCAGGATGAGCTGGGGGA...TGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR CCA 90 bp | GGAAGATATCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTGGATGGTGGACAGCTTTTCCAGCCTaGGGTCCCCCAGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRYLLVLRGTHPSWPGWWTAFPA*GPPAHP Trigger: AGGATGAGCTGGGGGACCCCAGGCTGGAAAAGCTGT...CCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGATATCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR TCA 90 bp | TGGGCTGTGAGGCACAGGAGGCTTTGGTGTTGGGCTGAACCAGAAAGGCAGAGCCCATGTCCGAGGGACTaGGAAGGTTCTCATAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: WAVRHRRLWCWAEPERQSPCPRD*EGSHNL Trigger: AAGGTTATGAGAACCTTCTCAGTCCCTCGGACATGG...GCTCTGCCTTTCTGGTTCAGCCCAACACCAAAGCCTCCTGTGCCTCACAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCGGTGTCTTCAAGTGTTCTCTCTAGGCTGCTGCTGGTGGCTTCTGGTCGAGCTCCTCCCTGAATaGCTCCAGTTCCTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRCLQVFSLGCCWWLLVELLPE*LQFLLS Trigger: ACTGAGAAGGAACTGGAGTCATTCAGGGAGGAGCTC...GACCAGAAGCCACCAGCAGCAGCCTAGAGAGAACACTTGAAGACACCGGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS-3UTR GCA 90 bp | TGGTATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCACCGATGCTCTCCACGTaGTTCAGCTTCTGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WYFKGSSLPRWSATPVTSPMLST*FSFWWE Trigger: TTCCCACCAGAAGCTGAAGCACGTGGAGAGCATCGG...TGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGATATCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTGGATGGTGGCCAGTTCCTTCTCAGTaGAGTTGGCAGACTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRYLLVLRGTHPSWPGWWPVPSQ*SWQTEP Trigger: TGGCTCAGTCTGCCAACTTCACTGAGAAGGAACTGG...CCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGATATCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCTGGCTCTAGGGATGGAGACAAACATTAGTGAAGGTGCATCTGACAGCGGTTCAGCTTCTCCATaGGGAACTCCTCCCCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: WPLALGMETNISEGASDSGSASP*GTPPRT Trigger: AGTCCGGGGAGGAGTTCCGCATGGAGAAGCTGAACC...GCTGTCAGATGCACCTTCACTAATGTTTGTCTCCATCCCTAGAGCCAGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR GCA 90 bp | GGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCAAGAACCTTCTTCAGCTCTaGTCAGTGTGTCTAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSLPRWSATPVTSGLCKNLLQL*SVCLAA Trigger: TGCTGCTAGACACACTGAGCAGAGCTGAAGAAGGTT...CTTGCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CCA 90 bp | TGTAGCTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAGCTCTTCAAACTCAGTaGTGGAGCCATAGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLRFPCGGSHTHPGKFAALQTQ*WSHSPG Trigger: ACCAGGGCTATGGCTCCACCACTGAGTTTGAAGAGC...TGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CCA 90 bp | TGGTATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGCTCTTCAAACTCAGTaGTGGAGCCATAGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WYFKGSSLPRWSATPVTSALQTQ*WSHSPG Trigger: ACCAGGGCTATGGCTCCACCACTGAGTTTGAAGAGC...TGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
||
| 3UTR CAA 72 bp | ACTGTAGGATCAGCTTGGTATTTCAAGGGATCCTCCTaGCCACGGTGGTCAGCCACACCAGTCACCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVGSAWYFKGSS*PRWSATPVTSG Trigger: ACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATACCAAGCTGATCCTACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS-3UTR GCA 90 bp | AAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCATTTTGGCCTCAAAGTaGTTGAGCTCCTCCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KGSSLPRWSATPVTSGLCILASK*LSSSLN Trigger: ATTCAGGGAGGAGCTCAAGCACTTTGAGGCCAAAAT...GCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
||
| 3UTR CAA 72 bp | TCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTaGCAGGATCTGATATCTGAGAGCTTAGTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLAVGVTLTQGS*QDLISESLVRS Trigger: ACTCCTGACTAAGCTCTCAGATATCAGATCCTGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR GCA 90 bp | TATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTATTTTGGCCTCAAAGTaGTTGAGCTCCTCCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YFKGSSLPRWSATPVTSGILASK*LSSSLN Trigger: ATTCAGGGAGGAGCTCAAGCACTTTGAGGCCAAAAT...ACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTCTGGCTCTAGGGATGGAGACAAACATTAGTGAAGGTGCATCTGACAGCACTGGAGAATTTCCCTaGTGTCTTTGCCTTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WPLALGMETNISEGASDSTGEFP*CLCLVP Trigger: TGGCACAAGGCAAAGACATCAGGGAAATTCTCCAGT...GCTGTCAGATGCACCTTCACTAATGTTTGTCTCCATCCCTAGAGCCAGAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| 3UTR CAA 72 bp | ATCTTCCAGGATCAGCTGCTGGGGTCAGACAAAATTTaGGCTATTCTGTGTGAGGGAACAGAGACTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IFQDQLLGSDKI*AILCEGTETGS Trigger: AGATCCAGTCTCTGTTCCCTCACACAGAATAGCCAAAATTTTGTCTGACCCCAGCAGCTGATCCTGGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| 3UTR CAA 72 bp | GGTGACAACTACACTTGCTTGAAAGAAAATAAGTCCTaGCCAGCCACTGTAGGATCAGCTTGGTATTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDNYTCLKENKS*PATVGSAWYFK Trigger: CTTGAAATACCAAGCTGATCCTACAGTGGCTGGCAAGGACTTATTTTCTTTCAAGCAAGTGTAGTTGTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS GCA 90 bp | CGCGCTTGGCGGCCATCTCCGGCTCGTTCTTCTCTCGCGAGTACTTaGCGCCATGGCCTGCTATGGGCTGGGGCACAAGCATCAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAWRPSPARSSLAST*RHGLLWAGAQASAA Trigger: TGCCGCTGATGCTTGTGCCCCAGCCCATAGCAGGCCATGGCGGCAAGTACTCGCGAGAGAAGAACGAGCCGGAGATGGCCGCCAAGCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CAA 90 bp | AAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCTCCCCGGACTCGCGCTaGGCGGCCATCTCCGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KGSSLPRWSATPVTSGLCSPDSR*AAISGS Trigger: CGAGCCGGAGATGGCCGCCAAGCGCGAGTCCGGGGA...GCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CCA 90 bp | GCTGGTTCAGCTTCTCCATGCGGAACTCCTCCCCGGACTCGCGCTTaGCGGCCATCTCCGGCTCGTTCTTCTCTCGCGAGTACTTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AGSASPCGTPPRTRA*RPSPARSSLASTCR Trigger: GCGGCAAGTACTCGCGAGAGAAGAACGAGCCGGAGATGGCCGCCAAGCGCGAGTCCGGGGAGGAGTTCCGCATGGAGAAGCTGAACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CCA 90 bp | GCGGCCATCTCCGGCTCGTTCTTCTCTCGCGAGTACTTGCCGCCATaGCCTGCTATGGGCTGGGGCACAAGCATCAGCGGCAGCAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: AAISGSFFSREYLPP*PAMGWGTSISGSNN Trigger: GTTGTTGCTGCCGCTGATGCTTGTGCCCCAGCCCATAGCAGGCCATGGCGGCAAGTACTCGCGAGAGAAGAACGAGCCGGAGATGGCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS GCA 90 bp | GGGTCCCCCAGCTCATCCTGGGTGTCTTCATTGAGGGCGTTGCTGTaGACCATCTGGGCGTCCTTCCTCCCATCCAGTCCGTATCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPSSSWVSSLRALL*TIWASFLPSSPYLA Trigger: GGCCAGATACGGACTGGATGGGAGGAAGGACGCCCAGATGGTGCACAGCAACGCCCTCAATGAAGACACCCAGGATGAGCTGGGGGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CCA 90 bp | AGCTCATCCTGGGTGTCTTCATTGAGGGCGTTGCTGTGCACCATCTaGGCGTCCTTCCTCCCATCCAGTCCGTATCTGGCCAGGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: SSSWVSSLRALLCTI*ASFLPSSPYLARMT Trigger: CGTCATCCTGGCCAGATACGGACTGGATGGGAGGAAGGACGCCCAGATGGTGCACAGCAACGCCCTCAATGAAGACACCCAGGATGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CAA 90 bp | AGCTCCCGGTGTCTTCAAGTGTTCTCTCTAGGCTGCTGCTGGTGGCTTCTGGTCCGGTCCAAGCCCTGGTaGATACTGCGCAGTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRCLQVFSLGCCWWLLVRSKPW*ILRSLS Trigger: GGACAGACTGCGCAGTATCAACCAGGGCTTGGACCG...GACCAGAAGCCACCAGCAGCAGCCTAGAGAGAACACTTGAAGACACCGGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS-3UTR CAA 90 bp | TATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCGGTCCAAGCCCTGGTaGATACTGCGCAGTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YFKGSSLPRWSATPVTSGRSKPW*ILRSLS Trigger: GGACAGACTGCGCAGTATCAACCAGGGCTTGGACCG...ACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS GCA 90 bp | TCCAAGCCCTGGTTGATACTGCGCAGTCTGTCCTTCAGCTCACTGTaGTTGCTGATCAGGGTGTCGCTCTTGATGTGGGCCATGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKPWLILRSLSFSSL*LLIRVSLLMWAMSE Trigger: CTCGGACATGGCCCACATCAAGAGCGACACCCTGATCAGCAAGCACAGTGAGCTGAAGGACAGACTGCGCAGTATCAACCAGGGCTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CAA 90 bp | AAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCCCTGATGTCTTTGCCTaGTGCCACAGCTTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGSSLPRWSATPVTSGLCPDVFA*CHSFSS Trigger: GCTGGAAAAGCTGTGGCACAAGGCAAAGACATCAGG...GCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CAA 90 bp | GGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCAATTGGCCTCAAAGTGCTaGAGCTCCTCCCTGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: GILLATVVSHTSHLRSMQLASKC*SSSLND Trigger: GTCATTCAGGGAGGAGCTCAAGCACTTTGAGGCCAA...TTGCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS-3UTR CAA 90 bp | TATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTTTCAGCTCACTGTGCTaGCTGATCAGGGTGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YFKGSSLPRWSATPVTSGFSSLC*LIRVSL Trigger: GAGCGACACCCTGATCAGCAAGCACAGTGAGCTGAA...ACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR CAA 90 bp | GGAAGATATCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTGGATGGTGGAACTCTCTCCACAGCTaGTCCAGCTCTTCACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRYLLVLRGTHPSWPGWWNSLHS*SSSSLE Trigger: CTCCAGTGAAGAGCTGGACAAGCTGTGGAGAGAGTT...CCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGATATCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CAA 90 bp | GGCCTCCTGACTAGAGATCTGCTCCAGAAGCAGGCAGCTCCCACACAGGTCACAGTGTCTAGCAGCACATaGTACTCCTGGATCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLLTRDLLQKQAAPTQVTVSSST*YSWIFS Trigger: AGAGAAGATCCAGGAGTACAATGTGCTGCTAGACAC...TGTGACCTGTGTGGGAGCTGCCTGCTTCTGGAGCAGATCTCTAGTCAGGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CAA 90 bp | TGTAGCTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCATTGGCCTCAAAGTGCTaGAGCTCCTCCCTGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSLRFPCGGSHTHPGKFALASKC*SSSLND Trigger: GTCATTCAGGGAGGAGCTCAAGCACTTTGAGGCCAA...TGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS TCA 90 bp | TCCTCCCTGAATGACTCCAGTTCCTTCTCAGTGAAGTTGGCAGACTaGGCCAGGTCCCACAGATCTATCACCCGGGGCTCTTCAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLNDSSSFSVKLAD*ARSHRSITRGSSNS Trigger: TGAGTTTGAAGAGCCCCGGGTGATAGATCTGTGGGACCTGGCTCAGTCTGCCAACTTCACTGAGAAGGAACTGGAGTCATTCAGGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS-3UTR CAA 90 bp | GGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCAAGGAGTTCATCCCTCTCTaGTATCTTCAGGTCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GSSLPRWSATPVTSGLCKEFIPL*YLQVRM Trigger: CATTCTGACCTGAAGATACAAGAGAGGGATGAACTC...CTTGCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTGTGAGGCACAGGAGGCTTTGGTGTTGGGCTGAACCAGAAAGGCAGAGCAGGATGACGTTGAGGTaGTGGATCAGTTTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WAVRHRRLWCWAEPERQSRMTLR*WISFAS Trigger: AGAAGCAAAACTGATCCACAACCTCAACGTCATCCT...GCTCTGCCTTTCTGGTTCAGCCCAACACCAAAGCCTCCTGTGCCTCACAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS-3UTR CAA 90 bp | GGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCAAGATTTCCCTGATGTCTTaGCCTTGTGCCACAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSLPRWSATPVTSGLCKISLMS*PCATAF Trigger: AAAAGCTGTGGCACAAGGCAAAGACATCAGGGAAAT...CTTGCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCGGTGTCTTCAAGTGTTCTCTCTAGGCTGCTGCTGGTGGCTTCTGGTCGAGTTCATCCCTCTCTaGTATCTTCAGGTCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SSRCLQVFSLGCCWWLLVEFIPL*YLQVRM Trigger: CATTCTGACCTGAAGATACAAGAGAGGGATGAACTC...GACCAGAAGCCACCAGCAGCAGCCTAGAGAGAACACTTGAAGACACCGGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCTTCAGCTTTTTCCAGTaGAGTTCATCCCTCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KGSSLPRWSATPVTSGLCFSFFQ*SSSLSC Trigger: ACAAGAGAGGGATGAACTCAACTGGAAAAAGCTGAA...GCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
||
| CDS-3UTR CAA 90 bp | TATTTCAAGGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTGGTTGTGGATCAGTTTaGCTTCTTTCTCCCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: YFKGSSLPRWSATPVTSGGCGSV*LLSPHP Trigger: AGGATGGGGAGAAAGAAGCAAAACTGATCCACAACC...ACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCCTTGAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR CAA 90 bp | GGGATCCTCCTTGCCACGGTGGTCAGCCACACCAGTCACCTCAGGTCTATGCAATTGTGCTTTTCAATTTaGGCCTCAAAGTGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GILLATVVSHTSHLRSMQLCFSI*ASKCLS Trigger: GCTCAAGCACTTTGAGGCCAAAATTGAAAAGCACAA...TTGCATAGACCTGAGGTGACTGGTGTGGCTGACCACCGTGGCAAGGAGGATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
||
| CDS CCA 90 bp | TTCCTCCCATCCAGTCCGTATCTGGCCAGGATGACGTTGAGGTTGTaGATCAGTTTTGCTTCTTTCTCCCCATCCTTATCCAAGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLPSSPYLARMTLRL*ISFASFSPSLSKPS Trigger: GGAAGGCTTGGATAAGGATGGGGAGAAAGAAGCAAAACTGATCCACAACCTCAACGTCATCCTGGCCAGATACGGACTGGATGGGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR CAA 90 bp | CTTGAGGTTCCCTTGCGGTGGGAGTCACACTCACCCAGGGAAGTTTGCAGGATCTTGTGCTTTTCAATTTaGGCCTCAAAGTGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEVPLRWESHSPREVCRILCFSI*ASKCLS Trigger: GCTCAAGCACTTTGAGGCCAAAATTGAAAAGCACAA...GATCCTGCAAACTTCCCTGGGTGAGTGTGACTCCCACCGCAAGGGAACCTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS-3UTR CAA 90 bp | GGAAGATATCTACTAGTGCTCAGAGGGACACATCCCAGCTGGCCTGGATGGTGGTTCAGCTTTTTCCAGTaGAGTTCATCCCTCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRYLLVLRGTHPSWPGWWFSFFQ*SSSLSC Trigger: ACAAGAGAGGGATGAACTCAACTGGAAAAAGCTGAA...CCACCATCCAGGCCAGCTGGGATGTGTCCCTCTGAGCACTAGTAGATATCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
||
| CDS CCA 72 bp | GCTTCTCCATGCGGAACTCCTCCCCGGACTCGCGCTTaGCGGCCATCTCCGGCTCGTTCTTCTCTCGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: ASPCGTPPRTRA*RPSPARSSLAS Trigger: ACTCGCGAGAGAAGAACGAGCCGGAGATGGCCGCCAAGCGCGAGTCCGGGGAGGAGTTCCGCATGGAGAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS GCA 72 bp | CGGCCATCTCCGGCTCGTTCTTCTCTCGCGAGTACTTaGCGCCATGGCCTGCTATGGGCTGGGGCACAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RPSPARSSLAST*RHGLLWAGAQA Trigger: TGCTTGTGCCCCAGCCCATAGCAGGCCATGGCGGCAAGTACTCGCGAGAGAAGAACGAGCCGGAGATGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CCA 72 bp | TCCGGCTCGTTCTTCTCTCGCGAGTACTTGCCGCCATaGCCTGCTATGGGCTGGGGCACAAGCATCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SGSFFSREYLPP*PAMGWGTSISG Trigger: GCCGCTGATGCTTGTGCCCCAGCCCATAGCAGGCCATGGCGGCAAGTACTCGCGAGAGAAGAACGAGCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 90 bp | AGCTGGTTCAGCTTCTCCATGCGGAACTCCTCCCCGGACTCGCGCTaGGCGGCCATCTCCGGCTCGTTCTTCTCTCGCGAGTACTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SWFSFSMRNSSPDSR*AAISGSFFSREYLP Trigger: CGGCAAGTACTCGCGAGAGAAGAACGAGCCGGAGATGGCCGCCAAGCGCGAGTCCGGGGAGGAGTTCCGCATGGAGAAGCTGAACCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CCA 72 bp | CCCTGGTGGCTGACCTTCCGCAGGCGGTCCAAGCCCTaGTTGATACTGCGCAGTCTGTCCTTCAGCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: PWWLTFRRRSKP*LILRSLSFSSL Trigger: CAGTGAGCTGAAGGACAGACTGCGCAGTATCAACCAGGGCTTGGACCGCCTGCGGAAGGTCAGCCACCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 72 bp | AGCCTGGGGTCCCCCAGCTCATCCTGGGTGTCTTCATaGAGGGCGTTGCTGTGCACCATCTGGGCGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLGSPSSSWVSS*RALLCTIWASF Trigger: GAAGGACGCCCAGATGGTGCACAGCAACGCCCTCAATGAAGACACCCAGGATGAGCTGGGGGACCCCAGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 90 bp | AGCCTGGGGTCCCCCAGCTCATCCTGGGTGTCTTCATTGAGGGCGTaGCTGTGCACCATCTGGGCGTCCTTCCTCCCATCCAGTCCGTAT | + |
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Preference number: 6 (lower is better) Translates to: SLGSPSSSWVSSLRA*LCTIWASFLPSSPY Trigger: ATACGGACTGGATGGGAGGAAGGACGCCCAGATGGTGCACAGCAACGCCCTCAATGAAGACACCCAGGATGAGCTGGGGGACCCCAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS GCA 72 bp | CTCGTTCTTCTCTCGCGAGTACTTGCCGCCATGGCCTaGTATGGGCTGGGGCACAAGCATCAGCGGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LVLLSRVLAAMA*YGLGHKHQRQQ Trigger: TTGCTGCCGCTGATGCTTGTGCCCCAGCCCATAGCAGGCCATGGCGGCAAGTACTCGCGAGAGAAGAACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS GCA 72 bp | CGGCTGATGTGCTCGGGGTCGCCGATGCTCTCCACGTaGTTCAGCTTCTGGTGGGAAATCTCCAGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RLMCSGSPMLST*FSFWWEISSCF Trigger: GAAGCAGCTGGAGATTTCCCACCAGAAGCTGAAGCACGTGGAGAGCATCGGCGACCCCGAGCACATCAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS CAA 72 bp | TCCCCCAGCTCATCCTGGGTGTCTTCATTGAGGGCGTaGCTGTGCACCATCTGGGCGTCCTTCCTCCCATCC | + |
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Preference number: 6 (lower is better) Translates to: SPSSSWVSSLRA*LCTIWASFLPS Trigger: GGATGGGAGGAAGGACGCCCAGATGGTGCACAGCAACGCCCTCAATGAAGACACCCAGGATGAGCTGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 72 bp | TGGTGGCTGACCTTCCGCAGGCGGTCCAAGCCCTGGTaGATACTGCGCAGTCTGTCCTTCAGCTCACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: WWLTFRRRSKPW*ILRSLSFSSLC Trigger: GCACAGTGAGCTGAAGGACAGACTGCGCAGTATCAACCAGGGCTTGGACCGCCTGCGGAAGGTCAGCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS GCA 72 bp | AGCTCATCCTGGGTGTCTTCATTGAGGGCGTTGCTGTaGACCATCTGGGCGTCCTTCCTCCCATCCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SSSWVSSLRALL*TIWASFLPSSP Trigger: CGGACTGGATGGGAGGAAGGACGCCCAGATGGTGCACAGCAACGCCCTCAATGAAGACACCCAGGATGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CCA 72 bp | TCTTCTCTCGCGAGTACTTGCCGCCATGGCCTGCTATaGGCTGGGGCACAAGCATCAGCGGCAGCAACAACA | + |
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Preference number: 6 (lower is better) Translates to: SSLASTCRHGLL*AGAQASAAATT Trigger: TGTTGTTGCTGCCGCTGATGCTTGTGCCCCAGCCCATAGCAGGCCATGGCGGCAAGTACTCGCGAGAGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CCA 72 bp | TGGGTGTCTTCATTGAGGGCGTTGCTGTGCACCATCTaGGCGTCCTTCCTCCCATCCAGTCCGTATCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WVSSLRALLCTI*ASFLPSSPYLA Trigger: GGCCAGATACGGACTGGATGGGAGGAAGGACGCCCAGATGGTGCACAGCAACGCCCTCAATGAAGACACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CCA 72 bp | CCCTGGTGGCTGACCTTCCGCAGGCGGTCCAAGCCCTaGTTGATACTGCGCAGTCTGTCCTTCAGCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: PWWLTFRRRSKP*LILRSLSFSFF Trigger: GAAAAAGCTGAAGGACAGACTGCGCAGTATCAACCAGGGCTTGGACCGCCTGCGGAAGGTCAGCCACCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153664.2 |
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| CDS CCA 72 bp | ACAAGCATCAGCGGCAGCAACAACAGCACTAGCAGTTaGAGCCGGGGCAGCGTAGAGACCCTCTCTCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: TSISGSNNSTSS*SRGSVETLSLR Trigger: TCGAAGAGAGAGGGTCTCTACGCTGCCCCGGCTCCAACTGCTAGTGCTGTTGTTGCTGCCGCTGATGCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 72 bp | TCCTTGGTCTTCTCCTCCAGCAGCACGTATTTCTCCTaGTTGCGGCTGATGTGCTCGGGGTCGCCGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLVFSSSSTYFS*LRLMCSGSPML Trigger: GAGCATCGGCGACCCCGAGCACATCAGCCGCAACAAGGAGAAATACGTGCTGCTGGAGGAGAAGACCAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030986.15 ENSMUST00000153664.2 |
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| CDS CAA 72 bp | TGGTGGCTGACCTTCCGCAGGCGGTCCAAGCCCTGGTaGATACTGCGCAGTCTGTCCTTCAGCTTTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: WWLTFRRRSKPW*ILRSLSFSFFQ Trigger: CTGGAAAAAGCTGAAGGACAGACTGCGCAGTATCAACCAGGGCTTGGACCGCCTGCGGAAGGTCAGCCACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153664.2 |
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| CDS CAA 90 bp | AAGCCCTGGTTGATACTGCGCAGTCTGTCCTTCAGCTCACTGTGCTaGCTGATCAGGGTGTCGCTCTTGATGTGGGCCATGTCCGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: KPWLILRSLSFSSLC*LIRVSLLMWAMSEG Trigger: TCCCTCGGACATGGCCCACATCAAGAGCGACACCCTGATCAGCAAGCACAGTGAGCTGAAGGACAGACTGCGCAGTATCAACCAGGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS GCA 72 bp | TGGTTGATACTGCGCAGTCTGTCCTTCAGCTCACTGTaGTTGCTGATCAGGGTGTCGCTCTTGATGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WLILRSLSFSSL*LLIRVSLLMWA Trigger: GGCCCACATCAAGAGCGACACCCTGATCAGCAAGCACAGTGAGCTGAAGGACAGACTGCGCAGTATCAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 72 bp | TTCAGCTCACTGTGCTTGCTGATCAGGGTGTCGCTCTaGATGTGGGCCATGTCCGAGGGACTGAGAAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FSSLCLLIRVSL*MWAMSEGLRRF Trigger: GAACCTTCTCAGTCCCTCGGACATGGCCCACATCAAGAGCGACACCCTGATCAGCAAGCACAGTGAGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 72 bp | TTGATACTGCGCAGTCTGTCCTTCAGCTCACTGTGCTaGCTGATCAGGGTGTCGCTCTTGATGTGGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: LILRSLSFSSLC*LIRVSLLMWAM Trigger: CATGGCCCACATCAAGAGCGACACCCTGATCAGCAAGCACAGTGAGCTGAAGGACAGACTGCGCAGTATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 90 bp | CAAGCCTTCCACCTTCAGCTTTTTCCAGTTGAGTTCATCCCTCTCTaGTATCTTCAGGTCAGAATGCAGCTCGGCCAGCCTCACAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: QAFHLQLFPVEFIPL*YLQVRMQLGQPHRR Trigger: TCTCCTGTGAGGCTGGCCGAGCTGCATTCTGACCTGAAGATACAAGAGAGGGATGAACTCAACTGGAAAAAGCTGAAGGTGGAAGGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 90 bp | TCCTTCCTCCCATCCAGTCCGTATCTGGCCAGGATGACGTTGAGGTaGTGGATCAGTTTTGCTTCTTTCTCCCCATCCTTATCCAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SFLPSSPYLARMTLR*WISFASFSPSLSKP Trigger: AGGCTTGGATAAGGATGGGGAGAAAGAAGCAAAACTGATCCACAACCTCAACGTCATCCTGGCCAGATACGGACTGGATGGGAGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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| CDS CAA 72 bp | CCATCCAGTCCGTATCTGGCCAGGATGACGTTGAGGTaGTGGATCAGTTTTGCTTCTTTCTCCCCATCCTTA | + |
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Preference number: 6 (lower is better) Translates to: PSSPYLARMTLR*WISFASFSPSL Trigger: TAAGGATGGGGAGAAAGAAGCAAAACTGATCCACAACCTCAACGTCATCCTGGCCAGATACGGACTGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030986.15 |
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