RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRP4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027253

Ensembl transcript IDs: ENSMUST00000028689.4

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGGCAAAGGGAGACGGAGCTCTGTGCTGACAAGGAATCACACTaGGCCCAGCTTCAGGGGGCCCAGGATAGAGTGCAAGAGGTGAAG +
Preference number: 1 (lower is better)
Translates to: PGQRETELCADKESH*AQLQGAQDRVQEVK
Trigger: CTTCACCTCTTGCACTCTATCCTGGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCTCCCTTTGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR GCA 90 bp CTATGGGGGCTCGGGAGCACTTTGGGGTGGGAGGAGGAAGATGCGTaGATGGGAAAGGGCCCGCGTTGTTATGTGAGCACAAGGATCAGA +
Preference number: 1 (lower is better)
Translates to: LWGLGSTLGWEEEDA*MGKGPRCYVSTRIR
Trigger: TCTGATCCTTGTGCTCACATAACAACGCGGGCCCTTTCCCATGCACGCATCTTCCTCCTCCCACCCCAAAGTGCTCCCGAGCCCCCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CCA 90 bp GAAGCTAATGCTGGCACTTTAGTGTGGACAGGGGCTGAGAAGAGTTaGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATG +
Preference number: 1 (lower is better)
Translates to: EANAGTLVWTGAEKS*HMTFTTREPQAVSM
Trigger: CATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAACTCTTCTCAGCCCCTGTCCACACTAAAGTGCCAGCATTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR GCA 90 bp TCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTaGCTGAACTTGCTCTGGACTGGTTCTCACCACCTCTCCACTCCT +
Preference number: 1 (lower is better)
Translates to: SAPANLSCASVSMEK*LNLLWTGSHHLSTP
Trigger: AGGAGTGGAGAGGTGGTGAGAACCAGTCCAGAGCAAGTTCAGGCACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR GCA 90 bp AGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATTAGTGAGTTaGCATGGCAGGAGCTATCCAGTTATCCAAGGTAGAAATGGCCCC +
Preference number: 1 (lower is better)
Translates to: STAHHSTRREFLLVS*HGRSYPVIQGRNGP
Trigger: GGGGCCATTTCTACCTTGGATAACTGGATAGCTCCTGCCATGGCAACTCACTAATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR GCA 90 bp CTAAAAGTCCTCTCCTCCATTCTCAGCACCTGCCAATCTCTCCTGTaGTTCGGTTTCTATGGAGAAGTGCCTGAACTTGCTCTGGACTGG +
Preference number: 1 (lower is better)
Translates to: LKVLSSILSTCQSLL*FGFYGEVPELALDW
Trigger: CCAGTCCAGAGCAAGTTCAGGCACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAGGAGAGGACTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CCA 90 bp CTCTCCTGTGCTTCGGTTTCTATGGAGAAGTGCCTGAACTTGCTCTaGACTGGTTCTCACCACCTCTCCACTCCTTGCTTACCACTTTAC +
Preference number: 1 (lower is better)
Translates to: LSCASVSMEKCLNLL*TGSHHLSTPCLPLY
Trigger: GTAAAGTGGTAAGCAAGGAGTGGAGAGGTGGTGAGAACCAGTCCAGAGCAAGTTCAGGCACTTCTCCATAGAAACCGAAGCACAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR GCA 90 bp TGCCTGAACTTGCTCTGGACTGGTTCTCACCACCTCTCCACTCCTTaGTTACCACTTTACATCTTCACTGACCCTCCTCATCATTGGACA +
Preference number: 1 (lower is better)
Translates to: CLNLLWTGSHHLSTP*LPLYIFTDPPHHWT
Trigger: TGTCCAATGATGAGGAGGGTCAGTGAAGATGTAAAGTGGTAAGCAAGGAGTGGAGAGGTGGTGAGAACCAGTCCAGAGCAAGTTCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR TCA 90 bp CCTCCTGAGCCCCTGGGTGTCTTGTGTCTCTCTAGTTGCTCTTTCTaGCCATTTAGGAAAATGTTGAGCCAGTCTTTGAAAGGCTGTGAC +
Preference number: 1 (lower is better)
Translates to: PPEPLGVLCLSSCSF*PFRKMLSQSLKGCD
Trigger: GTCACAGCCTTTCAAAGACTGGCTCAACATTTTCCTAAATGGTCAGAAAGAGCAACTAGAGAGACACAAGACACCCAGGGGCTCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CCA 90 bp AAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGAAAAGGCCATTaGCCTGCTCTGGCTCTGTGTGCAGACATATATCTGGGCCTAGCT +
Preference number: 1 (lower is better)
Translates to: KWHCTFLNWFTGKGH*PALALCADIYLGLA
Trigger: AGCTAGGCCCAGATATATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR TCA 90 bp CAGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTaGACAGCCCAAGTGCAAAAAGATCCTTGCCCCTTTCCACTCAGG +
Preference number: 1 (lower is better)
Translates to: QCSNRYFLKFVLSTF*TAQVQKDPCPFPLR
Trigger: CCTGAGTGGAAAGGGGCAAGGATCTTTTTGCACTTGGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR GCA 90 bp CAGAATGGAAGAGAGAAGAGTAGAATAGGTGAAGCTCGGGTAGGATaGTATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTG +
Preference number: 1 (lower is better)
Translates to: QNGREKSRIGEARVG*YAFFAELLKRSTSL
Trigger: CAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATAGCATCCTACCCGAGCTTCACCTATTCTACTCTTCTCTCTTCCATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR GCA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGAGTGGGAGGAGGAAGATaGGTGCATGGGAAAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LAHDLYHPRATGCVHELGVGGGR*VHGKGP
Trigger: GGGCCCTTTCCCATGCACGCATCTTCCTCCTCCCAC...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCATTACCTTTTAACCTGTaGCCTCCAGTCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSLPFNL*PPVPAP
Trigger: AGGGGCTGGGACTGGAGGTCACAGGTTAAAAGGTAA...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR GCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTGGCAGGCACATAGGATaGCAGGGCAAAGGGAGACGG +
Preference number: 2 (lower is better)
Translates to: NELKRFNLTILLLSPWVSGRHIG*QGKGRR
Trigger: CCGTCTCCCTTTGCCCTGGCATCCTATGTGCCTGCC...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTGGCTCGGGAGCACTTTaGGGTGGGAGGAGGAAGATG +
Preference number: 2 (lower is better)
Translates to: NELKRFNLTILLLSPWVSGSGAL*GGRRKM
Trigger: CATCTTCCTCCTCCCACCCCAAAGTGCTCCCGAGCC...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CAA 90 bp TTTGGGGTGGGAGGAGGAAGATGCGTGCATGGGAAAGGGCCCGCGTaGTTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAA +
Preference number: 2 (lower is better)
Translates to: FGVGGGRCVHGKGPA*LCEHKDQKSTEENE
Trigger: TTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAACAACGCGGGCCCTTTCCCATGCACGCATCTTCCTCCTCCCACCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATGACGGAGCTCTGTGCTaGCAAGGAATCACACTGAGC +
Preference number: 2 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHDGALC*QGITLS
Trigger: GCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTC...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTAGCACCCAGACCAGCTaGGCTGCTTCTTCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSSTQTS*AASSFS
Trigger: AGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCT...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CCA 90 bp AAGTGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTCTCCTCCTGAGCCCCTaGGTGTCTTGTGTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: KCKKILAPFHSGGHHASVLLLSP*VSCVSL
Trigger: TAGAGAGACACAAGACACCCAGGGGCTCAGGAGGAG...AACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR GCA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCTGCTCTGGCTCTGTGTaGAGACATATATCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: CKKILAPFHSGGHHASVSCSGSV*RHISGP
Trigger: AGGCCCAGATATATGTCTGCACACAGAGCCAGAGCA...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATGAACTTGCTCTGGACTaGTTCTCACCACCTCTCCAC +
Preference number: 2 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHELALD*FSPPLH
Trigger: GTGGAGAGGTGGTGAGAACCAGTCCAGAGCAAGTTC...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTCACCTGTATCACAACTaGCAAAGCAGTGACTTCTGG +
Preference number: 2 (lower is better)
Translates to: NELKRFNLTILLLSPWVSHLYHN*QSSDFW
Trigger: CCAGAAGTCACTGCTTTGTCAGTTGTGATACAGGTG...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCATGAACTTGGATCCCTaGGCACTTGAGAATGAACTC +
Preference number: 2 (lower is better)
Translates to: CKKILAPFHSGGHHASVSMNLDP*ALENEL
Trigger: GAGTTCATTCTCAAGTGCTCAGGGATCCAAGTTCAT...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp GTTTCCCTTAGAATCCCACAGAATGGAAGAGAGAAGAGTAGAATAGGTGAAGCTCCATCATGCCAGCTGTaGTGGGGAAGACCAGAGTCT +
Preference number: 2 (lower is better)
Translates to: VSLRIPQNGREKSRIGEAPSCQL*WGRPES
Trigger: AGACTCTGGTCTTCCCCATCACAGCTGGCATGATGG...AGCTTCACCTATTCTACTCTTCTCTCTTCCATTCTGTGGGATTCTAAGGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTATAATTACCAACACTTaGGGCTGGAGGTTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSIITNT*GWRFPK
Trigger: CTTGGGAAACCTCCAGCCTCAAGTGTTGGTAATTAT...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR GCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTTTCCTATTAGTGAGTTaGCATGGCAGGAGCTATCCA +
Preference number: 2 (lower is better)
Translates to: NELKRFNLTILLLSPWVSFLLVS*HGRSYP
Trigger: TGGATAGCTCCTGCCATGGCAACTCACTAATAGGAA...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp GGGGCCCAGGATAGAGTGCAAGAGGTGAAGTTCATGGTAAAATCCAGGTCTAAAAGTTTTGGACTCAGATaGGTAACAGGTTCTATGGGG +
Preference number: 2 (lower is better)
Translates to: GAQDRVQEVKFMVKSRSKSFGLR*VTGSMG
Trigger: CCCCATAGAACCTGTTACTCATCTGAGTCCAAAACT...TTTAGACCTGGATTTTACCATGAACTTCACCTCTTGCACTCTATCCTGGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATCAACTGACAAAGCAGTaGCTTCTGGATGAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYQLTKQ*LLDEEN
Trigger: ATTCTCCTCATCCAGAAGTCACTGCTTTGTCAGTTG...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CAA 90 bp AAATGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATaGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: KCPSFLLEVALYFSQ*VYWKRPLACSGSVC
Trigger: GCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR TCA 90 bp AAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCCAGGTCTAAATTCTTaGGATGTGCCCTCACTTCTT +
Preference number: 2 (lower is better)
Translates to: KWHCTFLNWFTGKGHWPAPGLNS*DVPSLL
Trigger: AAGAAGTGAGGGCACATCTCAAGAATTTAGACCTGG...AGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CCA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCGCTGGCACTTTAGTGTaGACAGGGGCTGAGAAGAGT +
Preference number: 2 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPAGTLV*TGAEKS
Trigger: ACTCTTCTCAGCCCCTGTCCACACTAAAGTGCCAGC...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CAA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCGGGCTCGGGAGCACTTaGGGGTGGGAGGAGGAAGAT +
Preference number: 3 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSGLGST*GWEEED
Trigger: ATCTTCCTCCTCCCACCCCAAAGTGCTCCCGAGCCC...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR TCA 72 bp AGGGAGACGGAGCTCTGTGCTGACAAGGAATCACACTaGGCCCAGCTTCAGGGGGCCCAGGATAGAGTGCAA +
Preference number: 3 (lower is better)
Translates to: RETELCADKESH*AQLQGAQDRVQ
Trigger: TTGCACTCTATCCTGGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CCA 72 bp GCTGGCACTTTAGTGTGGACAGGGGCTGAGAAGAGTTaGCACATGACCTTTACCACCCGAGAGCCACAGGCT +
Preference number: 3 (lower is better)
Translates to: AGTLVWTGAEKS*HMTFTTREPQA
Trigger: AGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAACTCTTCTCAGCCCCTGTCCACACTAAAGTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR TCA 72 bp GCCAGCTGTGATGGGGAAGACCAGAGTCTTATATCATaGATTGCATCGGTGCTGTGGGGCAGGCACATAGGA +
Preference number: 3 (lower is better)
Translates to: ASCDGEDQSLIS*IASVLWGRHIG
Trigger: TCCTATGTGCCTGCCCCACAGCACCGATGCAATTCATGATATAAGACTCTGGTCTTCCCCATCACAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR TCA 72 bp GTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGTaGTGGGGAAGACCAGAGTCTTATATCATGAATTGC +
Preference number: 3 (lower is better)
Translates to: VGQFTGRPSCQL*WGRPESYIMNC
Trigger: GCAATTCATGATATAAGACTCTGGTCTTCCCCATCACAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CAA 90 bp ACGTTCTACAAGTCTGCTCTCCAAGGCCCACCCAATGTTCACTCAAGCTCACAGCATAATTACCAACACTaGAGGCTGGAGGTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: TFYKSALQGPPNVHSSSQHNYQH*RLEVSQ
Trigger: TTGGGAAACCTCCAGCCTCAAGTGTTGGTAATTATG...CTGTGAGCTTGAGTGAACATTGGGTGGGCCTTGGAGAGCAGACTTGTAGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CCA 72 bp TTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTaGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: LEVALYFSQLVY*KRPLACSGSVC
Trigger: GCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CCA 72 bp TTACCACTTTACATCTTCACTGACCCTCCTCATCATTaGACATTAGCGATTGAGGTGACACAGGACCGGTTA +
Preference number: 3 (lower is better)
Translates to: LPLYIFTDPPHH*TLAIEVTQDRL
Trigger: TAACCGGTCCTGTGTCACCTCAATCGCTAATGTCCAATGATGAGGAGGGTCAGTGAAGATGTAAAGTGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR TCA 72 bp CCCCTGGGTGTCTTGTGTCTCTCTAGTTGCTCTTTCTaGCCATTTAGGAAAATGTTGAGCCAGTCTTTGAAA +
Preference number: 3 (lower is better)
Translates to: PLGVLCLSSCSF*PFRKMLSQSLK
Trigger: TTTCAAAGACTGGCTCAACATTTTCCTAAATGGTCAGAAAGAGCAACTAGAGAGACACAAGACACCCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CCA 72 bp TGTACTTTTCTCAATTGGTTTACTGGAAAAGGCCATTaGCCTGCTCTGGCTCTGTGTGCAGACATATATCTG +
Preference number: 3 (lower is better)
Translates to: CTFLNWFTGKGH*PALALCADIYL
Trigger: CAGATATATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR GCA 72 bp AGAGAGAAGAGTAGAATAGGTGAAGCTCGGGTAGGATaGTATGCTTTCTTTGCAGAGCTTCTTAAACGTTCT +
Preference number: 3 (lower is better)
Translates to: REKSRIGEARVG*YAFFAELLKRS
Trigger: AGAACGTTTAAGAAGCTCTGCAAAGAAAGCATAGCATCCTACCCGAGCTTCACCTATTCTACTCTTCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CAA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGTCCAGGTCTAAATTCTaGAGATGTGCCCTCACTTCT +
Preference number: 3 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWSRSKF*RCALTS
Trigger: AGAAGTGAGGGCACATCTCAAGAATTTAGACCTGGA...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR-3UTR CAA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGCTGACCAGAAAAGATTaGATCTTGTTTGTTCATGCG +
Preference number: 3 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWLTRKD*ILFVHA
Trigger: CGCATGAACAAACAAGATCAAATCTTTTCTGGTCAG...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR TCA 72 bp AATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTaGACAGCCCAAGTGCAAAAAGATCCTTGCCCCTTT +
Preference number: 3 (lower is better)
Translates to: NRYFLKFVLSTF*TAQVQKDPCPF
Trigger: AAAGGGGCAAGGATCTTTTTGCACTTGGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCCGGCCCGGTGGATGCTaGGGGTCTGCCAGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPRPGGC*GSASQS
Trigger: GGACTGACTGGCAGACCCGCAGCATCCACCGGGCCG...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CTCCAGTCCCAGCCCCTGGTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGCGCTCACCGCACATGTaGAGTGGCTCCGACCACATG +
Preference number: 4 (lower is better)
Translates to: LQSQPLVGQFTGRPSCQLRSPHM*SGSDHM
Trigger: CATGTGGTCGGAGCCACTTCACATGTGCGGTGAGCG...CAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTACCAGGGGCTGGGACTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCCAGTCCCAGCCCCTGGTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGTGGTCAGAGGCGCACTaGGGGCTTCCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LQSQPLVGQFTGRPSCQLWSEAH*GLPVFS
Trigger: TGAGAACACAGGAAGCCCCCAGTGCGCCTCTGACCA...CAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTACCAGGGGCTGGGACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCCAGTCCCAGCCCCTGGTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGTGGGGTGTAGGGCAATaGCTCTGGGCTTCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LQSQPLVGQFTGRPSCQLWGVGQ*LWASLG
Trigger: GCCTAGAGAAGCCCAGAGCCATTGCCCTACACCCCA...CAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTACCAGGGGCTGGGACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCACCAGAGCGGCAGGGCTaGTGGGAGGAGCAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSPERQG*WEEQSD
Trigger: GTCTGACTGCTCCTCCCACCAGCCCTGCCGCTCTGG...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCGGCCACTGTCACACATaGATTCCCCAGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSGHCHT*IPQSGR
Trigger: CCTGCCGCTCTGGGGAATTCATGTGTGACAGTGGCC...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CTTGAGGCTGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTGTCACCGCAGTCGTTaGTCCCGTTGCACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LEAGGFPSTQTSWAASSFCHRSR*SRCTAS
Trigger: GGAAGCTGTGCAACGGGATCAACGACTGCGGTGACA...GAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCAGCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGATGGGGCAGGTGCAGCTaGAGCCGCTCGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LAHDLYHPRATGCVHELGWGRCS*SRSDLG
Trigger: CCCCAAATCCGAGCGGCTTCAGCTGCACCTGCCCCA...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCACCTGTCCTGCTGTGTaGGGGCAAAGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: WRFPKHPDQLGCFFLLSTTCPAV*GQRGGT
Trigger: TGTCCCACCCCTTTGCCCTCACACAGCAGGACAGGT...GGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCCGGTGCGGGAGCACCTaGCGGATGTCGATACGATTG +
Preference number: 4 (lower is better)
Translates to: WRFPKHPDQLGCFFLLSTRCGST*RMSIRL
Trigger: CAATCGTATCGACATCCGGCAGGTGCTCCCGCACCG...GGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CTCCAGTCCCAGCCCCTGGTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGGTAGACACAGGTGAGTaGAACCTCCATTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LQSQPLVGQFTGRPSCQLVDTGE*NLHCCP
Trigger: GGGACAACAATGGAGGTTGCACTCACCTGTGTCTAC...CAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTACCAGGGGCTGGGACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCGCCCGGTCAACAGCTTaGATGTCCATGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSARSTA*MSMRPG
Trigger: GCCAGGCCTCATGGACATCCAAGCTGTTGACCGGGC...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCGAGCACAGTACGGTCTaGGCCATCCATTCCGGAACG +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSEHSTV*AIHSGT
Trigger: CGTTCCGGAATGGATGGCTCAGACCGTACTGTGCTC...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCAGTGGCTCCGACCACATaGACACTCCAGACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSVAPTT*TLQTAG
Trigger: GCCAGCAGTCTGGAGTGTGCATGTGGTCGGAGCCAC...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp ACGTTCTACAAGTCTGCTCTCCAAGGCCCACCCAATGTTCACTCAAGCTCACAGGCCCAGAGCCGTCCATaGTGGAGGCCTCAATGCGGG +
Preference number: 4 (lower is better)
Translates to: TFYKSALQGPPNVHSSSQAQSRP*WRPQCG
Trigger: CCCGCATTGAGGCCTCCAGCATGGACGGCTCTGGGC...CTGTGAGCTTGAGTGAACATTGGGTGGGCCTTGGAGAGCAGACTTGTAGAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACTGTCGGCCCGGTGGATaGTGCGGGTCTGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LNWFTGKGHWPALALCADCRPGG*CGSASQ
Trigger: CTGACTGGCAGACCCGCAGCATCCACCGGGCCGACA...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCCTCCCTTCAGCTGAATaGCAGTGGGACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: WRFPKHPDQLGCFFLLSTLPSAE*QWDRHR
Trigger: CCTGTGCCTGTCCCACTGGCATTCAGCTGAAGGGAG...GGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCAAGAGCATCTTCCTCCTaGCCCCTCCAGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSRASSS*PLQRGA
Trigger: CGCACCTCTCTGGAGGGGGCAGGAGGAAGATGCTCT...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCAGGATGTGGGAGGCCCTaGCTAATGACAGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSGCGRP*LMTALR
Trigger: CCGCAAGGCTGTCATTAGCCAGGGCCTCCCACATCC...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCCAGTCCCAGCCCCTGGTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGTCAATTCTCTCAGTATaGGCATCAGCCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: LQSQPLVGQFTGRPSCQLSILSV*ASAHSS
Trigger: ACTGCTGTGGGCTGATGCCCATACTGAGAGAATTGA...CAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTACCAGGGGCTGGGACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCAGCAGTCAGACTCGTCTaGCCAGTCTCCACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSAVRLV*PVSTVV
Trigger: GACGACTGTGGAGACTGGTCAGACGAGTCTGACTGC...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGAGGATGCGGTCCAGGGTaGCATCCGACCAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: LAHDLYHPRATGCVHELGGCGPG*HPTRRP
Trigger: TGGTCTTCTGGTCGGATGTCACCCTGGACCGCATCC...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCTGGGTGCTGGACTGGTaGCACCAGTGTATGCCGATT +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSWVLDW*HQCMPI
Trigger: AATCGGCATACACTGGTGTCACCAGTCCAGCACCCA...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCGTCCCTGTCTGCCGCTaGGGGGACACCACAATAATA +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSVPVCR*GDTTII
Trigger: TATTATTGTGGTGTCCCCTCAGCGGCAGACAGGGAC...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCAACCAATGCTCAGCAATaGAGCTGCCGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSTNAQQ*SCRRCS
Trigger: GCTGCAGCGACGGCAGCTGCATTGCTGAGCATTGGT...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCTGGAGGTGGTGCAGTTaGGTTCATCAGACTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPWRWCS*VHQTGH
Trigger: ATGACCAGTCTGATGAACGCAACTGCACCACCTCCA...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCCCAGAGCTTTGCAGCTaGGCCGATCGGGCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: CKKILAPFHSGGHHASVSPELCS*ADRAVA
Trigger: AGCTACGGCCCGATCGGCGCAGCTGCAAAGCTCTGG...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGACAAGGGCCACAGCACTaGGCACGTCAGCCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARQGPQH*ARQPVG
Trigger: TCCCACTGGCTGACGTGCGCAGTGCTGTGGCCCTTG...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCGTACCTTCCTCTTGCTaGCATCCAGCCCAGCAAATT +
Preference number: 4 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPVPSSC*HPAQQI
Trigger: AATTTGCTGGGCTGGATGGCAGCAAGAGGAAGGTAC...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTTCTCCAGGTTCTCCTaGAGAGTCTCCCGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: WRFPKHPDQLGCFFLLSTFSRFS*RVSRSS
Trigger: GCTAGACCGGGAGACTCTGCAGGAGAACCTGGAGAA...GGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCGATGGCAAAGGGATGTaGGAGGCCCTGGCTAATGAC +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSDGKGM*EALAND
Trigger: GTCATTAGCCAGGGCCTCCCACATCCCTTTGCCATC...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCGACCTGAGACACAAATaGCTGCAGCCGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSDLRHK*LQPPFS
Trigger: GGAGAATGGCGGCTGCAGCCATTTGTGTCTCAGGTC...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCGATGTCCATGAGGCCTaGCAGGTTGGACCTCACAAG +
Preference number: 4 (lower is better)
Translates to: WRFPKHPDQLGCFFLLSTDVHEA*QVGPHK
Trigger: CTTGTGAGGTCCAACCTGCCAGGCCTCATGGACATC...GGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGATCACACCGCAGGCATTaGTCCCTGTCTGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LAHDLYHPRATGCVHELGSHRRH*SLSAAE
Trigger: CTCAGCGGCAGACAGGGACCAATGCCTGCGGTGTGA...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCAGAGCCAGAGCTGGCCTaGATGGACACTGTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSEPELA*MDTVSV
Trigger: GACAGACACAGTGTCCATCCAGGCCAGCTCTGGCTC...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCACTTGTTGGCACTATTaGTGCTCTTGGTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPTCWHY*CSWCAS
Trigger: ACTGGCACACCAAGAGCATCAATAGTGCCAACAAGT...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCACCATCGCAGTACCAATaGTCAGCAATGCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSPSQYQ*SAMQLP
Trigger: CGGCAGCTGCATTGCTGAGCATTGGTACTGCGATGG...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCCTGTGCACATGGAGGTaGTGCAGTTGCGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: WRFPKHPDQLGCFFLLSTLCTWR*CSCVHQ
Trigger: CTGATGAACGCAACTGCACCACCTCCATGTGCACAG...GGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGAAGCAGCACCTTCCGGTaGGCCCCATCCAGATTAGCC +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARSSTFR*APSRLA
Trigger: GGCTAATCTGGATGGGGCCCACCGGAAGGTGCTGCT...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGATTTTTCCCTGCGGGCTaGCGCTGGGGGTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARFFPAG*RWGCKV
Trigger: TACCTTGCACCCCCAGCGCCAGCCCGCAGGGAAAAA...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCTTTATTAAAACCCAGTaGCTGTGCCCGGTCAACAGC +
Preference number: 4 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPFIKTQ*LCPVNS
Trigger: GCTGTTGACCGGGCACAGCCACTGGGTTTTAATAAA...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGACAGCGTAGTCGATGGTaGGGCCGTTGGGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARQRSRW*GRWARK
Trigger: TTTTCTGGCCCAACGGCCTCACCATCGACTACGCTG...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AAAATCTCAGCTCCCCTGAGAGAAGCCCTTGGCCTAAAGGAGCATGAAGCTAATCACAGGCGTGGCTGTTaGTCTTGCGGAAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: KISAPLREALGLKEHEANHRRGC*SCGSRW
Trigger: CCACCGGCTTCCGCAAGATCAACAGCCACGCCTGTG...ATTAGCTTCATGCTCCTTTAGGCCAAGGGCTTCTCTCAGGGGAGCTGAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATCGTCAGCCAGTGGGATaGCATCGTCGGACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHRQPVG*HRRTGP
Trigger: AGGACCTGTCCGACGATGTCATCCCACTGGCTGACG...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGACATCTCGTAGCAGGTTaGTACCTGTGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARHLVAG*YLWGRC
Trigger: GCACCTGCCCCACAGGTATCAACCTGCTACGAGATG...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATGATGTCCTCATGCTGTaGGCCATCCAGGCTGGCACG +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHDVLML*AIQAGT
Trigger: CGTGCCAGCCTGGATGGCTCACAGCATGAGGACATC...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACCTGTCTCCCTTCAGCTaGATGCCAGTGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: LNWFTGKGHWPALALCADLSPFS*MPVGQA
Trigger: TGCCTGTCCCACTGGCATTCAGCTGAAGGGAGACAG...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCATTAGACCTGGCTTTCTaGGGAGAGCTTGCGTTCGTG +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSLDLAF*GELAFV
Trigger: CACGAACGCAAGCTCTCCTCAGAAAGCCAGGTCTAA...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GGGGCCCAGGATAGAGTGCAAGAGGTGAAGTTCATGGTAAAATCCAGGTCTAAAGCTGGCTATTCCGTGTaGGCAGAGCAGGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAQDRVQEVKFMVKSRSKAGYSV*AEQGAK
Trigger: CTTGGCGCCCTGCTCTGCGCACACGGAATAGCCAGC...TTTAGACCTGGATTTTACCATGAACTTCACCTCTTGCACTCTATCCTGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGAGCCACAGACTCCGAATaGAGTAGCCGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARATDSE*SSRSGR
Trigger: CCTGCCAGAACGGCTACTGCATTCGGAGTCTGTGGC...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGGTGTGGCAGGTACACTaGACTGCCCCTCGCACCATC +
Preference number: 4 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRVWQVH*TAPRTI
Trigger: GATGGTGCGAGGGGCAGTGCAGTGTACCTGCCACAC...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACCATCCACCCAGTACATaGGGCGACCAGCGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: LNWFTGKGHWPALALCADHPPST*GDQRSR
Trigger: TCGACTACGCTGGTCGCCGCATGTACTGGGTGGATG...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTGGCTGGAGGCGTCCATaGCAGCCCGTTCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSGWRRP*QPVQSW
Trigger: CCAAGATTGAACGGGCTGGCATGGACGCCTCCAGCC...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGGGCAACCCAGTCCACTaGCAGCCCGTCAGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRGNPVH*QPVSGL
Trigger: AAGACCACTGACGGGCTGGCAGTGGACTGGGTTGCC...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CTTGAGGCTGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCGATCCGATCCAGATGTaGATCTACCCAGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: LEAGGFPSTQTSWAASSFDPIQM*IYPVDP
Trigger: AGGATCTACTGGGTAGATGCACATCTGGATCGGATC...GAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCAGCCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCTTTCTGAGGAGAGCTTaGGTTCGTGTTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSFLRRA*VRVSSL
Trigger: CAGGCTGGAAACACGAACGCAAGCTCTCCTCAGAAA...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCGTGTTTGTGCAGCCCTaGCTGCAGTACCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CKKILAPFHSGGHHASVSVFVQP*LQYPSS
Trigger: TGAGGAGGGGTACTGCAGCCAGGGCTGCACAAACAC...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCAAAGGGTGGGGGAGCTaGCTTCCAATTAGTACCTTC +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSKGWGS*LPISTF
Trigger: GAAGGTACTAATTGGAAGCCAGCTCCCCCACCCTTT...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGAGTGAGGGCAAAGGGGTaGGACACATGGCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARVRAKG*DTWLTK
Trigger: CTTGGTCAGCCATGTGTCCCACCCCTTTGCCCTCAC...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCGCACAGAGGCCCAGCTaGGCATCCCTTTCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: CKKILAPFHSGGHHASVSAQRPS*ASLSEH
Trigger: ATGCTCTGAAAGGGATGCCCAGCTGGGCCTCTGTGC...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACAGGAGAGGGTACTGCTaGAGGGCAGCTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LNWFTGKGHWPALALCADRRGYC*RAAFLI
Trigger: GATGAGGAAAGCTGCCCTTCAGCAGTACCCTCTCCT...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGAATGACAGCCTTGCGGTaGCTCCCATCTAGATTGGCC +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARMTALR*LPSRLA
Trigger: GGCCAATCTAGATGGGAGTCACCGCAAGGCTGTCAT...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATCCTCTGTGTCGAAGCTaGTCCGACGGATGTCCATCC +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHPLCRS*SDGCPS
Trigger: GGATGGACATCCGTCGGATCAGCTTCGACACAGAGG...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACTCGGATTTGGGGACCTaGGACACAAATGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LNWFTGKGHWPALALCADSDLGT*DTNGCS
Trigger: GCTGCAGCCATTTGTGTCTCAGGTCCCCAAATCCGA...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTTCATGGTCATGTTaGTGGGTACCACCACATCAG +
Preference number: 4 (lower is better)
Translates to: WRFPKHPDQLGCFFLLSTSSWSC*WVPPHQ
Trigger: CTGATGTGGTGGTACCCATCAACATGACCATGAAGA...GGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCCGTCTAGACTGTTGTTaGTTAGCACTTTGCGACAGG +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSRLDCC*LALCDR
Trigger: CCTGTCGCAAAGTGCTAATCAACAACAGTCTAGACG...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGAGCTGCGCAGTTGCTTaGGGTCACCCCATTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRSCAVA*GHPIQR
Trigger: ACGCTGAATGGGGTGACCTCAAGCAACTGCGCAGCT...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCTCAGACTGCTCTTCCTaGAGCAGCTGCTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CKKILAPFHSGGHHASVSSDCSS*SSCSVS
Trigger: GGAGACAGAGCAGCTGCTTCAGGAAGAGCAGTCTGA...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATGCTCAGCAATGCAGCTaGCGTCGCTGCAGCGGAATT +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHAQQCS*RRCSGI
Trigger: AATTCCGCTGCAGCGACGGCAGCTGCATTGCTGAGC...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATGGTAGATGTCGAGGATaGAGCGGCCATAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHGRCRG*SGHRRT
Trigger: AGTGCGCCTATGGCCGCTGCATCCTCGACATCTACC...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTGCAGGTACACTGCACTaGCCCTCGCACCATCTGACA +
Preference number: 4 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSAGTLH*PSHHLT
Trigger: TGTCAGATGGTGCGAGGGGCAGTGCAGTGTACCTGC...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATGCACGGCTGATCCTGTaGAGCGTGCTGTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYARLIL*SVLSDQ
Trigger: CTGGTCTGACAGCACGCTGCACAGGATCAGCCGTGC...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCAGAGCCATCCAGGTTTaGCCGTTCAATCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSRAIQV*PFNLGN
Trigger: ATTGCCAAGATTGAACGGGCAAACCTGGATGGCTCT...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGATCTCTCCGGAGTGGCTaGAGTGTGAACACTGCTACA +
Preference number: 4 (lower is better)
Translates to: LAHDLYHPRATGCVHELGSLRSG*SVNTAT
Trigger: TGTAGCAGTGTTCACACTGCAGCCACTCCGGAGAGA...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATTCTTGCGGAAGCCGGTaGGGCAGGCACAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYSCGSR*GRHRCS
Trigger: ACTACACCTGTGCCTGCCCCACCGGCTTCCGCAAGA...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTCTCTGGGCACAGGCGTaGCTGTTGATCTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSLWAQA*LLILRK
Trigger: CTTCCGCAAGATCAACAGCCACGCCTGTGCCCAGAG...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AAAATCTCAGCTCCCCTGAGAGAAGCCCTTGGCCTAAAGGAGCATGAAGCTAATGCGCACGTCAGCCAGTaGGATGACATCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: KISAPLREALGLKEHEANAHVSQ*DDIVGQ
Trigger: CTGTCCGACGATGTCATCCCACTGGCTGACGTGCGC...ATTAGCTTCATGCTCCTTTAGGCCAAGGGCTTCTCTCAGGGGAGCTGAGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGACAGCCCGTTCAATCTTaGGACTTGCACCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARQPVQS*DLHPSQ
Trigger: CTGACTGGGGTGCAAGTCCCAAGATTGAACGGGCTG...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTCTTGTCGGCCCGGTaGATGCTGCGGGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KWHCTFLNWFTGKGHWPALLSAR*MLRVCQ
Trigger: CTGGCAGACCCGCAGCATCCACCGGGCCGACAAGAG...AGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGAACGTGCACGTCTGTGTaGTCATCGGTGTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARTCTSV*SSVSSE
Trigger: CTCACTGGACACCGATGACCACACAGACGTGCACGT...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGAAGGGGTGGGACACATaGCTGACCAAGACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRKGWDT*LTKTCL
Trigger: GAGGCAGGTCTTGGTCAGCCATGTGTCCCACCCCTT...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp ACGTTCTACAAGTCTGCTCTCCAAGGCCCACCCAATGTTCACTCAAGCTCACAGCAGGGACGGCTTCATTaGAATGTGCACAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TFYKSALQGPPNVHSSSQQGRLH*NVHRGP
Trigger: TGGGCCTCTGTGCACATTCCAATGAAGCCGTCCCTG...CTGTGAGCTTGAGTGAACATTGGGTGGGCCTTGGAGAGCAGACTTGTAGAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTCTAGGGAGCCAGAGCTaGCCTGGATGGACACTGTGT +
Preference number: 4 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSLGSQS*PGWTLC
Trigger: ACACAGTGTCCATCCAGGCCAGCTCTGGCTCCCTAG...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTGCGGAATTCCTTGTCTaGGCACTTGCGCATGTCGCA +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSAEFLV*ALAHVA
Trigger: TGCGACATGCGCAAGTGCTCAGACAAGGAATTCCGC...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTCAAGGTTCTCCCAGATaGGCACTGTCCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSQGSPR*ALSSCC
Trigger: GCAGCATGAGGACAGTGCTCATCTGGGAGAACCTTG...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTAGGAGTCAAGCAGAGTaGGGCCATATGGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSRSQAE*GHMGAG
Trigger: TCCAGCACCCATATGGCCTCACTCTGCTTGACTCCT...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp GGGGCCCAGGATAGAGTGCAAGAGGTGAAGTTCATGGTAAAATCCAGGTCTAAAGCCTCAGCTTCCCATTaGGGTCAGCACTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: GAQDRVQEVKFMVKSRSKASASH*GQHSRS
Trigger: GGATCGAGAGTGCTGACCTCAATGGGAAGCTGAGGC...TTTAGACCTGGATTTTACCATGAACTTCACCTCTTGCACTCTATCCTGGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATTTGTCTCCATCACACTaGCACTGGGCGGGGATACAG +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHLSPSH*HWAGIQ
Trigger: CTGTATCCCCGCCCAGTGGCAGTGTGATGGAGACAA...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGACCTTGTCTGAGCACTTaGGCATGTCGCATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARPCLST*ACRIAR
Trigger: ACGAGCAATGCGACATGCGCAAGTGCTCAGACAAGG...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATGGCTTCATTGGAATGTaGACAGAGGCCCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYGFIGM*TEAQLG
Trigger: GCCCAGCTGGGCCTCTGTGCACATTCCAATGAAGCC...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCACTGCAGTGTGAACACTaGTACACTCAGACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSLQCEH*YTQTAL
Trigger: AAGAGCAGTCTGAGTGTAGCAGTGTTCACACTGCAG...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGACCGCACATGTGAAGTaGCTCCGACCACATGCACAC +
Preference number: 4 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRTAHVK*LRPHAH
Trigger: GTGTGCATGTGGTCGGAGCCACTTCACATGTGCGGT...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATGTAGGGCAATGGCTCTaGGCTTCTCTAGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYVGQWL*ASLGSA
Trigger: GGCAGAGCCTAGAGAAGCCCAGAGCCATTGCCCTAC...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTTGCTGCCATCTGTGTTaGCCACTTCGATCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSCCHLC*PLRSCP
Trigger: CGGACAGGATCGAAGTGGCCAACACAGATGGCAGCA...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTGTCAGCCCAAAAGGGTaGGGGAGCTGGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSVSPKG*GSWLPI
Trigger: AATTGGAAGCCAGCTCCCCCACCCTTTTGGGCTGAC...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AAAATCTCAGCTCCCCTGAGAGAAGCCCTTGGCCTAAAGGAGCATGAAGCTAATACACTTTCCGGCCGATaGCATCCACTGCAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: KISAPLREALGLKEHEANTLSGR*HPLQAR
Trigger: ACGGGCTTGCAGTGGATGCCATCGGCCGGAAAGTGT...ATTAGCTTCATGCTCCTTTAGGCCAAGGGCTTCTCTCAGGGGAGCTGAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCCACGTTGGATCGATTTaGTCTGCCAGTCCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CKKILAPFHSGGHHASVSHVGSI*SASPSS
Trigger: ACTGGACGGACTGGCAGACCAAATCGATCCAACGTG...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp ACGTTCTACAAGTCTGCTCTCCAAGGCCCACCCAATGTTCACTCAAGCTCACAGCAGAGCTGGCCTGGATaGACACTGTGTCTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TFYKSALQGPPNVHSSSQQSWPG*TLCLSS
Trigger: TGAAGACAGACACAGTGTCCATCCAGGCCAGCTCTG...CTGTGAGCTTGAGTGAACATTGGGTGGGCCTTGGAGAGCAGACTTGTAGAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTGGAGCTTGTTGCGAATaGTTTCCTGGTTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSGACCE*FPGSSP
Trigger: CGGGGAAGAACCAGGAAATCATTCGCAACAAGCTCC...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATTTGTCCCCATCACAGTaGCACAGACTCCGAATGCAG +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHLSPSQ*HRLRMQ
Trigger: CTGCATTCGGAGTCTGTGGCACTGTGATGGGGACAA...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATGGAACTCTTCCAGGTTaGAAGGAGGAGAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHGTLPG*KEERVL
Trigger: CAGTACCCTCTCCTCCTTGCAACCTGGAAGAGTTCC...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGGTGTACTCGGAGCGGTaGGGGAGCACCTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWVYSER*GSTCRM
Trigger: CATCCGGCAGGTGCTCCCGCACCGCTCCGAGTACAC...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATGCACTGTCCTCATGCTaGCATCTGTGTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHALSSC*HLCWPL
Trigger: AAGTGGCCAACACAGATGGCAGCATGAGGACAGTGC...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGGAGCGGCAGGGCTGGTaGGAGGAGCAGTCAGACTCG +
Preference number: 4 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWERQGW*EEQSDS
Trigger: CGAGTCTGACTGCTCCTCCCACCAGCCCTGCCGCTC...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTGCGGATCCACTCCAATaGCGATGGTGTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSADPLQ*RWCSSW
Trigger: CCATGAAGAACACCATCGCCATTGGAGTGGATCCGC...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTAGAGGTACCCCTTTCTaGGGAAAACAGCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSRGTPF*GKQQWP
Trigger: GGGCCATTGCTGTTTTCCCCAGAAAGGGGTACCTCT...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACAAGAATGTAAGGTGGTaGGCAGCGTGTTGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LNWFTGKGHWPALALCADKNVRW*AACWVA
Trigger: TGCTACCCAACACGCTGCCCACCACCTTACATTCTT...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGAGTTTCACTTCCTGAGTaGAAGTTCGGTAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARVSLPE*KFGRRG
Trigger: ACCCCTCCTACCGAACTTCCACTCAGGAAGTGAAAC...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATTGGGGGTGCAAGGTATaGATGTCCATAGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHWGCKV*MSIGKW
Trigger: CCACTTTCCTATGGACATTCATACCTTGCACCCCCA...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp GGGGCCCAGGATAGAGTGCAAGAGGTGAAGTTCATGGTAAAATCCAGGTCTAAATGGCGGTGGAAGACATaGATGTCCATGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GAQDRVQEVKFMVKSRSKWRWKT*MSMRFS
Trigger: GGAGAACCTCATGGACATTCATGTCTTCCACCGCCA...TTTAGACCTGGATTTTACCATGAACTTCACCTCTTGCACTCTATCCTGGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp GTTTCCCTTAGAATCCCACAGAATGGAAGAGAGAAGAGTAGAATAGGTGAAGCTGGTGGGACACATGGCTaGCCAAGACCTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VSLRIPQNGREKSRIGEAGGTHG*PRPASA
Trigger: AGCTGAGGCAGGTCTTGGTCAGCCATGTGTCCCACC...AGCTTCACCTATTCTACTCTTCTCTCTTCCATTCTGTGGGATTCTAAGGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGATTCCCTCTACAATCTTaGTCTTCTCCTTGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LAHDLYHPRATGCVHELGFPLQS*SSPWCS
Trigger: GCTACACCAAGGAGAAGATCAAGATTGTAGAGGGAA...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTCATCAGAGCCATCTTTaGAGTCTGTGTCACCATCGC +
Preference number: 4 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSHQSHL*SLCHHR
Trigger: GCGATGGTGACACAGACTGCAAAGATGGCTCTGATG...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp AAGTGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTTAGTACCTTCCTCTTaGTGCCATCCAGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: KCKKILAPFHSGGHHASVLVPSS*CHPAQQ
Trigger: TTGCTGGGCTGGATGGCAGCAAGAGGAAGGTACTAA...AACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATGGCTGGCTTGGGAGCTaGTTCAAGTTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYGWLGS*FKFHFL
Trigger: CAGGAAGTGAAACTTGAAGCAGCTCCCAAGCCAGCC...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGATTGCGTTCATCAGACTaGTCATCACAGTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: LAHDLYHPRATGCVHELGLRSSD*SSQSAS
Trigger: TGATGCAGACTGTGATGACCAGTCTGATGAACGCAA...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATAGGCCATATGGGTGCTaGACTGGTGACACCAGTGTA +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYRPYGC*TGDTSV
Trigger: TACACTGGTGTCACCAGTCCAGCACCCATATGGCCT...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTCGAGGTAAACAGAGGTaGGAACAGCCGCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSRGKQR*EQPPFL
Trigger: AAGAAATGGCGGCTGTTCCCACCTCTGTTTACCTCG...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTTCAATCTTGGCAATGTaGCCCCAGTCTGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSSILAM*PQSVQK
Trigger: CTTCTGGACAGACTGGGGCCACATTGCCAAGATTGA...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACTACTTGTCGACACGTTaGATCGATTTGGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LNWFTGKGHWPALALCADYLSTR*IDLVCQ
Trigger: CTGGCAGACCAAATCGATCCAACGTGTCGACAAGTA...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTGCTCTCCAAGGCCTTTCCAGCCTGTGTCTaGCAGAGAGCCCCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: YAFFAELLKRSTSLLSKAFPACV*QRAPSL
Trigger: GAGAGACGGGGCTCTCTGCCAGACACAGGCTGGAAA...GGCCTTGGAGAGCAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
3UTR CAA 72 bp TTCTACATTCTGAACAGCCCAAGTGCAAAAAGATCCTaGCCCCTTTCCACTCAGGAGGACACCACGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FYILNSPSAKRS*PLSTQEDTTLL
Trigger: CAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCACTTGGGCTGTTCAGAATGTAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCGCCCCTCGCACCATCTaGCACTTCTGGGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPAPRTI*HFWAQP
Trigger: TGGCTGTGCCCAGAAGTGTCAGATGGTGCGAGGGGC...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AAAATCTCAGCTCCCCTGAGAGAAGCCCTTGGCCTAAAGGAGCATGAAGCTAATTGGACCTCACAAGGATaGCATTGCTGCCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: KISAPLREALGLKEHEANWTSQG*HCCQYS
Trigger: AGAGTACTGGCAGCAATGTCATCCTTGTGAGGTCCA...ATTAGCTTCATGCTCCTTTAGGCCAAGGGCTTCTCTCAGGGGAGCTGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATAGCGCCATTCAGGTCTaGCACCTCAATTCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYSAIQV*HLNSLS
Trigger: ACTGAGAGAATTGAGGTGGCAGACCTGAATGGCGCT...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp AAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTGTGAGGCCATATGGGTaGTGGACTGGTGACACCAGT +
Preference number: 4 (lower is better)
Translates to: KWHCTFLNWFTGKGHWPAVRPYG*WTGDTS
Trigger: ACTGGTGTCACCAGTCCAGCACCCATATGGCCTCAC...AGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TTCTGGATGAGGAGAATGTCCACTGCCAGCAATGGACATGATTCCAGGGCTCGACTGTGTCTGTCTTCATaGATACGTGATCCCGTAGAA +
Preference number: 4 (lower is better)
Translates to: FWMRRMSTASNGHDSRARLCLSS*IRDPVE
Trigger: TTCTACGGGATCACGTATGCATGAAGACAGACACAG...TCGAGCCCTGGAATCATGTCCATTGCTGGCAGTGGACATTCTCCTCATCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATGCTTCACACCAGCACTaGAAAGCCCCTTCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYASHQH*KAPSVF
Trigger: AAACACTGAAGGGGCTTTCCAGTGCTGGTGTGAAGC...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GGGGCCCAGGATAGAGTGCAAGAGGTGAAGTTCATGGTAAAATCCAGGTCTAAAGAAAGTCGAGGGCAATaGCGTTCTCCAGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GAQDRVQEVKFMVKSRSKESRGQ*RSPGCS
Trigger: TGAACAACCTGGAGAACGCCATTGCCCTCGACTTTC...TTTAGACCTGGATTTTACCATGAACTTCACCTCTTGCACTCTATCCTGGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCAGTCTGTCCAATAAATaGTTCCCTCCATGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: CKKILAPFHSGGHHASVSSLSNK*FPPWGV
Trigger: TACACCCCATGGAGGGAACCATTTATTGGACAGACT...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp CTCCATTCTCAGCACCTGCCAATCTCTCCTGTGCTTCGGTTTCTATGGAGAAGTCCACTCCAATGGCGATaGTGTTCTTCATGGTCATGT +
Preference number: 4 (lower is better)
Translates to: LHSQHLPISPVLRFLWRSPLQWR*CSSWSC
Trigger: ACATGACCATGAAGAACACCATCGCCATTGGAGTGG...ACTTCTCCATAGAAACCGAAGCACAGGAGAGATTGGCAGGTGCTGAGAATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATACAGCAGTTGGGAACTaGTCTTGTCCACAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYTAVGN*SCPQSV
Trigger: GACTGACTGTGGACAAGACCAGTTCCCAACTGCTGT...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATTTGGGCCAGAAAAGATaGGTGTCAGCAATGATGCGA +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYLGQKR*VSAMMR
Trigger: TCGCATCATTGCTGACACTCATCTTTTCTGGCCCAA...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AAAATCTCAGCTCCCCTGAGAGAAGCCCTTGGCCTAAAGGAGCATGAAGCTAATTGTCTTCAAACACTGTaGTGGCAAAGGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: KISAPLREALGLKEHEANCLQTL*WQRDVG
Trigger: TCCCACATCCCTTTGCCATCACAGTGTTTGAAGACA...ATTAGCTTCATGCTCCTTTAGGCCAAGGGCTTCTCTCAGGGGAGCTGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp GGGGCCCAGGATAGAGTGCAAGAGGTGAAGTTCATGGTAAAATCCAGGTCTAAAAGACATGAATGTCCATaGGGTTCTCCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAQDRVQEVKFMVKSRSKRHECP*GSPGSP
Trigger: AGGAGAACCTGGAGAACCTCATGGACATTCATGTCT...TTTAGACCTGGATTTTACCATGAACTTCACCTCTTGCACTCTATCCTGGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTGCTCTCCAAGGCCGAAACTGTTCGGCTGTaGACATGGAGGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: YAFFAELLKRSTSLLSKAETVRL*TWRWCS
Trigger: ACTGCACCACCTCCATGTGCACAGCCGAACAGTTTC...GGCCTTGGAGAGCAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGGGTGACCCAATCAATTaGCAGGCCAGCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWGDPIN*QASRAL
Trigger: GAGAGCCCTGCTGGCCTGGCAATTGATTGGGTCACC...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp AAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTGTACTGTCTCCTTGTTaGGGCCCGAGTACTTGTCGA +
Preference number: 4 (lower is better)
Translates to: KWHCTFLNWFTGKGHWPAVLSPC*GPSTCR
Trigger: TCGACAAGTACTCGGGCCGCAACAAGGAGACAGTAC...AGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGTTCCAACACAGGAACTaGTCAGAGGCGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWFQHRN*SEAHWG
Trigger: CCCCCAGTGCGCCTCTGACCAGTTCCTGTGTTGGAA...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGGCCCTCTCGATGACGTaGTGCTTAGCATCCACCCAG +
Preference number: 4 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWALSMT*CLASTQ
Trigger: CTGGGTGGATGCTAAGCACCACGTCATCGAGAGGGC...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTGCTCTCCAAGGCCTGTAGTTCTGGCCACTaGGTAGACACAGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: YAFFAELLKRSTSLLSKACSSGH*VDTGEC
Trigger: GCACTCACCTGTGTCTACCCAGTGGCCAGAACTACA...GGCCTTGGAGAGCAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTGCTCTCCAAGGCCCAGGGCTCTCCAAACTaGTATCCACTACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: YAFFAELLKRSTSLLSKAQGSPN*YPLPPP
Trigger: AGGAGGTGGTAGTGGATACCAGTTTGGAGAGCCCTG...GGCCTTGGAGAGCAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AAATCCAGGTCTAAATTCTTGAGATGTGCCCTCACTTCTTGTCCCCAGGTAGTTTCAGCCCACAGCAGTTaGGAACTGGTCTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: KSRSKFLRCALTSCPQVVSAHSS*ELVLST
Trigger: TGTGGACAAGACCAGTTCCCAACTGCTGTGGGCTGA...AACTACCTGGGGACAAGAAGTGAGGGCACATCTCAAGAATTTAGACCTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTGCTCTCCAAGGCCGAGCAGGTAGGTTTCTaGAGAGGGGTCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: YAFFAELLKRSTSLLSKAEQVGF*RGVTGL
Trigger: AAGACCTGTGACCCCTCTCCAGAAACCTACCTGCTC...GGCCTTGGAGAGCAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATTATACACGGCTGGCTTaGGAGCTGCTTCAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYYTRLA*ELLQVS
Trigger: TGAAACTTGAAGCAGCTCCCAAGCCAGCCGTGTATA...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTACAGCCGCCATTTCTTaGGCCACATTTATTAAAACC +
Preference number: 4 (lower is better)
Translates to: NELKRFNLTILLLSPWVSTAAIS*ATFIKT
Trigger: GGTTTTAATAAATGTGGCTCAAGAAATGGCGGCTGT...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp TATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTGCTCTCCAAGGCCTTCGGTAGGAGGGGTTaGTATAGGTCAGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: YAFFAELLKRSTSLLSKAFGRRG*YRSGFP
Trigger: TGGGAAACCTGACCTATAGCAACCCCTCCTACCGAA...GGCCTTGGAGAGCAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp GTTTCCCTTAGAATCCCACAGAATGGAAGAGAGAAGAGTAGAATAGGTGAAGCTCCGACAGTTCTGCTGTaGACTTTCGTCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VSLRIPQNGREKSRIGEAPTVLL*TFVTAV
Trigger: GACAGCAGTGACGAAAGTCCACAGCAGAACTGTCGG...AGCTTCACCTATTCTACTCTTCTCTCTTCCATTCTGTGGGATTCTAAGGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGTCTGTCCAATACACGTaGTCATCCCGGGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWSVQYT*SSRESQ
Trigger: CTGGGACTCCCGGGATGACCACGTGTATTGGACAGA...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AAATCCAGGTCTAAATTCTTGAGATGTGCCCTCACTTCTTGTCCCCAGGTAGTTCTGATTATACACGGCTaGCTTGGGAGCTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KSRSKFLRCALTSCPQVVLIIHG*LGSCFK
Trigger: CTTGAAGCAGCTCCCAAGCCAGCCGTGTATAATCAG...AACTACCTGGGGACAAGAAGTGAGGGCACATCTCAAGAATTTAGACCTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp GGGGCCCAGGATAGAGTGCAAGAGGTGAAGTTCATGGTAAAATCCAGGTCTAAAAGTCAGTCCAATAGATaGGCTGTCCATATAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GAQDRVQEVKFMVKSRSKSQSNR*AVHIES
Trigger: TGACTCTATATGGACAGCGCATCTATTGGACTGACT...TTTAGACCTGGATTTTACCATGAACTTCACCTCTTGCACTCTATCCTGGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCCCATCACACTGCCACTaGGCGGGGATACAGGTACAT +
Preference number: 4 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPPSHCH*AGIQVH
Trigger: ATGTACCTGTATCCCCGCCCAGTGGCAGTGTGATGG...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CCA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCAACTTGTCAAGACTCTaGGCACAGGCGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPNLSRL*AQAWLL
Trigger: CAACAGCCACGCCTGTGCCCAGAGTCTTGACAAGTT...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR TCA 90 bp AAATCCAGGTCTAAATTCTTGAGATGTGCCCTCACTTCTTGTCCCCAGGTAGTTAGTCTGTCCAGTACATaGACCCCATTTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: KSRSKFLRCALTSCPQVVSLSST*TPFHGI
Trigger: TATACCATGAAATGGGGTTCATGTACTGGACAGACT...AACTACCTGGGGACAAGAAGTGAGGGCACATCTCAAGAATTTAGACCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR GCA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCCTACCCAGTAGATCCTaGGGGTATCATAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPLPSRS*GYHSPR
Trigger: CCTTGGACTATGATACCCGCAGGATCTACTGGGTAG...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp CCGGGAGTCCCAGTCAAGGGCCACAGCACTGCGCACGTCAGCCAGTaGGATGACATCGTCGGACAGGTCCTCTGTGTCGAAGCTGATCCG +
Preference number: 5 (lower is better)
Translates to: PGVPVKGHSTAHVSQ*DDIVGQVLCVEADP
Trigger: CGGATCAGCTTCGACACAGAGGACCTGTCCGACGATGTCATCCCACTGGCTGACGTGCGCAGTGCTGTGGCCCTTGACTGGGACTCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp GTCATCCTCCCCATCACAGCGCCAGGACAGACGGACGCAACGGCCTaGCCGACAGCGAAACTGTTCGGCTGTGCACATGGAGGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: VILPITAPGQTDATA*PTAKLFGCAHGGGA
Trigger: TGCACCACCTCCATGTGCACAGCCGAACAGTTTCGCTGTCGGTCAGGCCGTTGCGTCCGTCTGTCCTGGCGCTGTGATGGGGAGGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp TTCGCCAAGCGCGCTCACCGCACATGTGAAGTGGCTCCGACCACATaGACACTCCAGACTGCTGGCTATTCCGTGTGCGCAGAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: FAKRAHRTCEVAPTT*TLQTAGYSVCAEQG
Trigger: GCCCTGCTCTGCGCACACGGAATAGCCAGCAGTCTGGAGTGTGCATGTGGTCGGAGCCACTTCACATGTGCGGTGAGCGCGCTTGGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp CCCTCCATGGGGTGTAGGGCAATGGCTCTGGGCTTCTCTAGGCTCTaGCATAGCAGCACCTTCCGGTGGGCCCCATCCAGATTAGCCACC +
Preference number: 5 (lower is better)
Translates to: PSMGCRAMALGFSRL*HSSTFRWAPSRLAT
Trigger: GGTGGCTAATCTGGATGGGGCCCACCGGAAGGTGCTGCTATGGCAGAGCCTAGAGAAGCCCAGAGCCATTGCCCTACACCCCATGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp CTGCGCCGATCGGGCCGTAGCTCATACCCTGCTTCACACCAGCACTaGAAAGCCCCTTCAGTGTTTGTGCAGCCCTGGCTGCAGTACCCC +
Preference number: 5 (lower is better)
Translates to: LRRSGRSSYPASHQH*KAPSVFVQPWLQYP
Trigger: GGGGTACTGCAGCCAGGGCTGCACAAACACTGAAGGGGCTTTCCAGTGCTGGTGTGAAGCAGGGTATGAGCTACGGCCCGATCGGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCGTGGTGGGCAGCGTGTaGGGTAGCACTGGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPVVGSV*GSTGLF
Trigger: GAAGAGCCCAGTGCTACCCAACACGCTGCCCACCAC...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp GCTCTGGGAGCAGGAGGTACGAGGCCAGGTACAAGGGAGCAGGGATaGCCGTCAGGCTCATCAGGACACGCGCACACAAAGTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: ALGAGGTRPGTREQG*PSGSSGHAHTKSEA
Trigger: AGCCTCTGACTTTGTGTGCGCGTGTCCTGATGAGCCTGACGGTCATCCCTGCTCCCTTGTACCTGGCCTCGTACCTCCTGCTCCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp CCCATCCTCTGTGAGCCGGTAGCCTGTGTGGCAGGTACACTGCACTaGCCCTCGCACCATCTGACACTTCTGGGCACAGCCACCGTTGTT +
Preference number: 5 (lower is better)
Translates to: PILCEPVACVAGTLH*PSHHLTLLGTATVV
Trigger: AACAACGGTGGCTGTGCCCAGAAGTGTCAGATGGTGCGAGGGGCAGTGCAGTGTACCTGCCACACAGGCTACCGGCTCACAGAGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp CAGGTGCAGCTGAAGCCGCTCGGATTTGGGGACCTGAGACACAAATaGCTGCAGCCGCCATTCTCCACGGCACACAGCGTCGTCACTGGA +
Preference number: 5 (lower is better)
Translates to: QVQLKPLGFGDLRHK*LQPPFSTAHSVVTG
Trigger: TCCAGTGACGACGCTGTGTGCCGTGGAGAATGGCGGCTGCAGCCATTTGTGTCTCAGGTCCCCAAATCCGAGCGGCTTCAGCTGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp CTCCAGTCCCAGCCCCTGGTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGTGCCTCAGCTTCCCATaGAGGTCAGCACTCTCGATC +
Preference number: 5 (lower is better)
Translates to: LQSQPLVGQFTGRPSCQLCLSFP*RSALSI
Trigger: GATCGAGAGTGCTGACCTCAATGGGAAGCTGAGGCA...CAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTACCAGGGGCTGGGACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp CTCCAGTCCCAGCCCCTGGTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGACACGTTGGATCGATTaGGTCTGCCAGTCCGTCCAG +
Preference number: 5 (lower is better)
Translates to: LQSQPLVGQFTGRPSCQLTRWID*VCQSVQ
Trigger: CTGGACGGACTGGCAGACCAAATCGATCCAACGTGT...CAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTACCAGGGGCTGGGACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp GGGCGGGGATACAGGTACATTCGCCAAGCGCGCTCACCGCACATGTaGAGTGGCTCCGACCACATGCACACTCCAGACTGCTGGCTATTC +
Preference number: 5 (lower is better)
Translates to: GRGYRYIRQARSPHM*SGSDHMHTPDCWLF
Trigger: GAATAGCCAGCAGTCTGGAGTGTGCATGTGGTCGGAGCCACTTCACATGTGCGGTGAGCGCGCTTGGCGAATGTACCTGTATCCCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp GCGTCGTCACTGGAGGCCTCTGGCGGTGGAAGACATGAATGTCCATaGGGTTCTCCAGGTTCTCCTGCAGAGTCTCCCGGTCTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: ASSLEASGGGRHECP*GSPGSPAESPGLAQ
Trigger: CTGGGCTAGACCGGGAGACTCTGCAGGAGAACCTGGAGAACCTCATGGACATTCATGTCTTCCACCGCCAGAGGCCTCCAGTGACGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp ACGGCACACAGCGTCGTCACTGGAGGCCTCTGGCGGTGGAAGACATaGATGTCCATGAGGTTCTCCAGGTTCTCCTGCAGAGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: TAHSVVTGGLWRWKT*MSMRFSRFSCRVSR
Trigger: CCGGGAGACTCTGCAGGAGAACCTGGAGAACCTCATGGACATTCATGTCTTCCACCGCCAGAGGCCTCCAGTGACGACGCTGTGTGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp CTGGCAGAGAGCCCCGTCTCTCCGGAGTGGCTGCAGTGTGAACACTaGTACACTCAGACTGCTCTTCCTGAAGCAGCTGCTCTGTCTCCG +
Preference number: 5 (lower is better)
Translates to: LAESPVSPEWLQCEH*YTQTALPEAAALSP
Trigger: CGGAGACAGAGCAGCTGCTTCAGGAAGAGCAGTCTGAGTGTAGCAGTGTTCACACTGCAGCCACTCCGGAGAGACGGGGCTCTCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp CCGACCAGAAGACCAGCTCCCGCCGGTGATGAAAGTCGAGGGCAATaGCGTTCTCCAGGTTGTTCAGTAGCAGCGTGTACTCGGAGCGGT +
Preference number: 5 (lower is better)
Translates to: PTRRPAPAGDESRGQ*RSPGCSVAACTRSG
Trigger: ACCGCTCCGAGTACACGCTGCTACTGAACAACCTGGAGAACGCCATTGCCCTCGACTTTCATCACCGGCGGGAGCTGGTCTTCTGGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp CCTCAGCACATTCGTTTACATCCTGGCACGTTCTCCCATCCTCTGTaGGCCGGTAGCCTGTGTGGCAGGTACACTGCACTGCCCCTCGCA +
Preference number: 5 (lower is better)
Translates to: PQHIRLHPGTFSHPL*AGSLCGRYTALPLA
Trigger: TGCGAGGGGCAGTGCAGTGTACCTGCCACACAGGCTACCGGCTCACAGAGGATGGGAGAACGTGCCAGGATGTAAACGAATGTGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp CGATACGATTGGCAAACAGTAGCACAGGTTCTGGCCCCAGAGCTTTaGAGCTGCGCCGATCGGGCCGTAGCTCATACCCTGCTTCACACC +
Preference number: 5 (lower is better)
Translates to: RYDWQTVAQVLAPEL*SCADRAVAHTLLHT
Trigger: GGTGTGAAGCAGGGTATGAGCTACGGCCCGATCGGCGCAGCTGCAAAGCTCTGGGGCCAGAACCTGTGCTACTGTTTGCCAATCGTATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp TTGGCCCTGCTGATGGTATCAGTGCTGACATCTGTCCAATACACGTaGTCATCCCGGGAGTCCCAGTCAAGGGCCACAGCACTGCGCACG +
Preference number: 5 (lower is better)
Translates to: LALLMVSVLTSVQYT*SSRESQSRATALRT
Trigger: CGTGCGCAGTGCTGTGGCCCTTGACTGGGACTCCCGGGATGACCACGTGTATTGGACAGATGTCAGCACTGATACCATCAGCAGGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp CTCCAGTCCCAGCCCCTGGTAGGCCAGTTCACAGGGAGGCCATCATGCCAGCTGCGGATGTCGATACGATaGGCAAACAGTAGCACAGGT +
Preference number: 5 (lower is better)
Translates to: LQSQPLVGQFTGRPSCQLRMSIR*ANSSTG
Trigger: ACCTGTGCTACTGTTTGCCAATCGTATCGACATCCG...CAGCTGGCATGATGGCCTCCCTGTGAACTGGCCTACCAGGGGCTGGGACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCCCTGTTCCATCCCACTaGGCCCTGCTGATGGTATCA +
Preference number: 5 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPPVPSH*ALLMVS
Trigger: TGATACCATCAGCAGGGCCAAGTGGGATGGAACAGG...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp GACAGTTCTGCTGTGGACTTTCGTCACTGCTGTCACCGCAGTCGTTaGTCCCGTTGCACAGCTTCCTCTGCCCAATACAGCGCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: DSSAVDFRHCCHRSR*SRCTASSAQYSARS
Trigger: GGAACGGGCGCTGTATTGGGCAGAGGAAGCTGTGCAACGGGATCAACGACTGCGGTGACAGCAGTGACGAAAGTCCACAGCAGAACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp TGTCGAGGATGCAGCGGCCATAGGCGCACTGGAACTCTTCCAGGTTaGAAGGAGGAGAGGGTACTGCTGAAGGGCAGCTTTCCTCATCAG +
Preference number: 5 (lower is better)
Translates to: CRGCSGHRRTGTLPG*KEERVLLKGSFPHQ
Trigger: CTGATGAGGAAAGCTGCCCTTCAGCAGTACCCTCTCCTCCTTGCAACCTGGAAGAGTTCCAGTGCGCCTATGGCCGCTGCATCCTCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp AGGTTGTTCAGTAGCAGCGTGTACTCGGAGCGGTGCGGGAGCACCTaGCGGATGTCGATACGATTGGCAAACAGTAGCACAGGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: RLFSSSVYSERCGST*RMSIRLANSSTGSG
Trigger: GCCAGAACCTGTGCTACTGTTTGCCAATCGTATCGACATCCGGCAGGTGCTCCCGCACCGCTCCGAGTACACGCTGCTACTGAACAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp ATGGCGTTCTCCAGGTTGTTCAGTAGCAGCGTGTACTCGGAGCGGTaGGGGAGCACCTGCCGGATGTCGATACGATTGGCAAACAGTAGC +
Preference number: 5 (lower is better)
Translates to: MAFSRLFSSSVYSER*GSTCRMSIRLANSS
Trigger: GCTACTGTTTGCCAATCGTATCGACATCCGGCAGGTGCTCCCGCACCGCTCCGAGTACACGCTGCTACTGAACAACCTGGAGAACGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp ATGTCCTCATGCTGTGAGCCATCCAGGCTGGCACGGCTGATCCTGTaGAGCGTGCTGTCAGACCAGTACACTTTTCCTTCCAGCGGATCC +
Preference number: 5 (lower is better)
Translates to: MSSCCEPSRLARLIL*SVLSDQYTFPSSGS
Trigger: GGATCCGCTGGAAGGAAAAGTGTACTGGTCTGACAGCACGCTGCACAGGATCAGCCGTGCCAGCCTGGATGGCTCACAGCATGAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp GGGATACAGGTACATTCGCCAAGCGCGCTCACCGCACATGTGAAGTaGCTCCGACCACATGCACACTCCAGACTGCTGGCTATTCCGTGT +
Preference number: 5 (lower is better)
Translates to: GIQVHSPSALTAHVK*LRPHAHSRLLAIPC
Trigger: ACACGGAATAGCCAGCAGTCTGGAGTGTGCATGTGGTCGGAGCCACTTCACATGTGCGGTGAGCGCGCTTGGCGAATGTACCTGTATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp GGACGCAACGGCCTGACCGACAGCGAAACTGTTCGGCTGTGCACATaGAGGTGGTGCAGTTGCGTTCATCAGACTGGTCATCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: GRNGLTDSETVRLCT*RWCSCVHQTGHHSL
Trigger: CAGACTGTGATGACCAGTCTGATGAACGCAACTGCACCACCTCCATGTGCACAGCCGAACAGTTTCGCTGTCGGTCAGGCCGTTGCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp AACATTGCAGTTCTCCTCACCCGTCCGGGGCCGACAGTTCTGCTGTaGACTTTCGTCACTGCTGTCACCGCAGTCGTTGATCCCGTTGCA +
Preference number: 5 (lower is better)
Translates to: NIAVLLTRPGPTVLL*TFVTAVTAVVDPVA
Trigger: TGCAACGGGATCAACGACTGCGGTGACAGCAGTGACGAAAGTCCACAGCAGAACTGTCGGCCCCGGACGGGTGAGGAGAACTGCAATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCTGGGCACAGCCACCGTaGTTAACATTGCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPWAQPP*LTLQFS
Trigger: GGAGAACTGCAATGTTAACAACGGTGGCTGTGCCCA...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGAGCACAGGCGTGGCTGTaGATCTTGCGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: LAHDLYHPRATGCVHELGAQAWL*ILRKPV
Trigger: CACCGGCTTCCGCAAGATCAACAGCCACGCCTGTGC...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCAGCAGGGACGGCTTCATaGGAATGTGCACAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSAGTAS*ECAQRP
Trigger: GGGCCTCTGTGCACATTCCAATGAAGCCGTCCCTGC...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCACCTGGAGCTGCGCAGTaGCTTGAGGTCACCCCATTC +
Preference number: 5 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSPGAAQ*LEVTPF
Trigger: GAATGGGGTGACCTCAAGCAACTGCGCAGCTCCAGG...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp ATGGCAAAGGGATGTGGGAGGCCCTGGCTAATGACAGCCTTGCGGTaGCTCCCATCTAGATTGGCCCTCTCGATGACGTGGTGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: MAKGCGRPWLMTALR*LPSRLALSMTWCLA
Trigger: TGCTAAGCACCACGTCATCGAGAGGGCCAATCTAGATGGGAGTCACCGCAAGGCTGTCATTAGCCAGGGCCTCCCACATCCCTTTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp CCCAGGAACAGGAACGTGCACGTCTGTGTGGTCATCGGTGTCCAGTaGGATACGGCGAATAGAGCCTCGGCTAGAGAAGAGCAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: PRNRNVHVCVVIGVQ*DTANRASAREEQVG
Trigger: ACCTACCTGCTCTTCTCTAGCCGAGGCTCTATTCGCCGTATCTCACTGGACACCGATGACCACACAGACGTGCACGTTCCTGTTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp TTGTTAACATTGCAGTTCTCCTCACCCGTCCGGGGCCGACAGTTCTaGTGTGGACTTTCGTCACTGCTGTCACCGCAGTCGTTGATCCCG +
Preference number: 5 (lower is better)
Translates to: LLTLQFSSPVRGRQF*CGLSSLLSPQSLIP
Trigger: CGGGATCAACGACTGCGGTGACAGCAGTGACGAAAGTCCACAGCAGAACTGTCGGCCCCGGACGGGTGAGGAGAACTGCAATGTTAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp CACAGCTTCCTCTGCCCAATACAGCGCCCGTTCCAACACAGGAACTaGTCAGAGGCGCACTGGGGGCTTCCTGTGTTCTCACAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: HSFLCPIQRPFQHRN*SEAHWGLPVFSQFS
Trigger: AGAAAACTGTGAGAACACAGGAAGCCCCCAGTGCGCCTCTGACCAGTTCCTGTGTTGGAACGGGCGCTGTATTGGGCAGAGGAAGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp CCCAGTCTGTCCAATAAATGGTTCCCTCCATGGGGTGTAGGGCAATaGCTCTGGGCTTCTCTAGGCTCTGCCATAGCAGCACCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: PSLSNKWFPPWGVGQ*LWASLGSAIAAPSG
Trigger: ACCGGAAGGTGCTGCTATGGCAGAGCCTAGAGAAGCCCAGAGCCATTGCCCTACACCCCATGGAGGGAACCATTTATTGGACAGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp ACCCAGTGGCTGTGCCCGGTCAACAGCTTGGATGTCCATGAGGCCTaGCAGGTTGGACCTCACAAGGATGACATTGCTGCCAGTACTCTT +
Preference number: 5 (lower is better)
Translates to: TQWLCPVNSLDVHEA*QVGPHKDDIAASTL
Trigger: AAGAGTACTGGCAGCAATGTCATCCTTGTGAGGTCCAACCTGCCAGGCCTCATGGACATCCAAGCTGTTGACCGGGCACAGCCACTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp GCTGCTCTGTCTCCGTGTCATCTAGGGAGCCAGAGCTGGCCTGGATaGACACTGTGTCTGTCTTCATGCATACGTGATCCCGTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: AALSPCHLGSQSWPG*TLCLSSCIRDPVEG
Trigger: GCCTTCTACGGGATCACGTATGCATGAAGACAGACACAGTGTCCATCCAGGCCAGCTCTGGCTCCCTAGATGACACGGAGACAGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp CCTGAAGCAGCTGCTCTGTCTCCGTGTCATCTAGGGAGCCAGAGCTaGCCTGGATGGACACTGTGTCTGTCTTCATGCATACGTGATCCC +
Preference number: 5 (lower is better)
Translates to: PEAAALSPCHLGSQS*PGWTLCLSSCIRDP
Trigger: GGGATCACGTATGCATGAAGACAGACACAGTGTCCATCCAGGCCAGCTCTGGCTCCCTAGATGACACGGAGACAGAGCAGCTGCTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGACGGAGCTCTGTGCTGACAAGGAATCACACTGAGCCCAGCTTCAGGGGGCCCACCACCTCCTCTACATaGCTGCCATTAAGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RRSSVLTRNHTEPSFRGPTTSST*LPLRLA
Trigger: TGCCAACCTTAATGGCAGCAATGTAGAGGAGGTGGT...GGGCCCCCTGAAGCTGGGCTCAGTGTGATTCCTTGTCAGCACAGAGCTCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCCCTGGTGAGCATGTCTaGCCATCTCGTAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSPGEHV*PSRSRL
Trigger: CAACCTGCTACGAGATGGCAAGACATGCTCACCAGG...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp ATGCTCAGCAATGCAGCTGCCGTCGCTGCAGCGGAATTCCTTGTCTaGGCACTTGCGCATGTCGCATTGCTCGTCACTGTTGTCACCACA +
Preference number: 5 (lower is better)
Translates to: MLSNAAAVAAAEFLV*ALAHVALLVTVVTT
Trigger: TGTGGTGACAACAGTGACGAGCAATGCGACATGCGCAAGTGCTCAGACAAGGAATTCCGCTGCAGCGACGGCAGCTGCATTGCTGAGCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp CCACAGCGGTTTTTCCCTGCGGGCTGGCGCTGGGGGTGCAAGGTATaGATGTCCATAGGAAAGTGGAGCTTGTTGCGAATGATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PQRFFPAGWRWGCKV*MSIGKWSLLRMISW
Trigger: CCAGGAAATCATTCGCAACAAGCTCCACTTTCCTATGGACATTCATACCTTGCACCCCCAGCGCCAGCCCGCAGGGAAAAACCGCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp TGTCACCATCGCAGTACCAATGCTCAGCAATGCAGCTGCCGTCGCTaGAGCGGAATTCCTTGTCTGAGCACTTGCGCATGTCGCATTGCT +
Preference number: 5 (lower is better)
Translates to: CHHRSTNAQQCSCRR*SGIPCLSTCACRIA
Trigger: AGCAATGCGACATGCGCAAGTGCTCAGACAAGGAATTCCGCTGCAGCGACGGCAGCTGCATTGCTGAGCATTGGTACTGCGATGGTGACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp TGCAGTCTGTGTCACCATCGCAGTACCAATGCTCAGCAATGCAGCTaGCGTCGCTGCAGCGGAATTCCTTGTCTGAGCACTTGCGCATGT +
Preference number: 5 (lower is better)
Translates to: CSLCHHRSTNAQQCS*RRCSGIPCLSTCAC
Trigger: ACATGCGCAAGTGCTCAGACAAGGAATTCCGCTGCAGCGACGGCAGCTGCATTGCTGAGCATTGGTACTGCGATGGTGACACAGACTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp TCTGCCACCTCAATTCTCTCAGTATGGGCATCAGCCCACAGCAGTTaGGAACTGGTCTTGTCCACAGTCAGTCCATTGGGCCACCCTAGG +
Preference number: 5 (lower is better)
Translates to: SATSILSVWASAHSS*ELVLSTVSPLGHPR
Trigger: CCTAGGGTGGCCCAATGGACTGACTGTGGACAAGACCAGTTCCCAACTGCTGTGGGCTGATGCCCATACTGAGAGAATTGAGGTGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp GATACGGCGAATAGAGCCTCGGCTAGAGAAGAGCAGGTAGGTTTCTaGAGAGGGGTCACAGGTCTTCCTGTCTCCCTTCAGCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: DTANRASAREEQVGF*RGVTGLPVSLQLNA
Trigger: GGCATTCAGCTGAAGGGAGACAGGAAGACCTGTGACCCCTCTCCAGAAACCTACCTGCTCTTCTCTAGCCGAGGCTCTATTCGCCGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACTTGCTGCCAGTACTCTaGTCGGCCCGGTGGATGCTG +
Preference number: 5 (lower is better)
Translates to: LNWFTGKGHWPALALCADLLPVL*SARWML
Trigger: CAGCATCCACCGGGCCGACAAGAGTACTGGCAGCAA...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCATAAGTCCCTCCACGTaGGCCAGTACTGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSISPST*ASTVSL
Trigger: CAAGGAGACAGTACTGGCCAACGTGGAGGGACTTAT...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp ACGTTCTACAAGTCTGCTCTCCAAGGCCCACCCAATGTTCACTCAAGCTCACAGGAGCTGCGCAGTTGCTaGAGGTCACCCCATTCAGCG +
Preference number: 5 (lower is better)
Translates to: TFYKSALQGPPNVHSSSQELRSC*RSPHSA
Trigger: CGCTGAATGGGGTGACCTCAAGCAACTGCGCAGCTC...CTGTGAGCTTGAGTGAACATTGGGTGGGCCTTGGAGAGCAGACTTGTAGAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp GATATAGGAGTCAAGCAGAGTGAGGCCATATGGGTGCTGGACTGGTaGCACCAGTGTATGCCGATTAGCGCCATTCAGGTCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: DIGVKQSEAIWVLDW*HQCMPISAIQVCHL
Trigger: GAGGTGGCAGACCTGAATGGCGCTAATCGGCATACACTGGTGTCACCAGTCCAGCACCCATATGGCCTCACTCTGCTTGACTCCTATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp CATCTTTGCAGTCTGTGTCACCATCGCAGTACCAATGCTCAGCAATaGAGCTGCCGTCGCTGCAGCGGAATTCCTTGTCTGAGCACTTGC +
Preference number: 5 (lower is better)
Translates to: HLCSLCHHRSTNAQQ*SCRRCSGIPCLSTC
Trigger: GCAAGTGCTCAGACAAGGAATTCCGCTGCAGCGACGGCAGCTGCATTGCTGAGCATTGGTACTGCGATGGTGACACAGACTGCAAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp CATACCCTGCTTCACACCAGCACTGGAAAGCCCCTTCAGTGTTTGTaGAGCCCTGGCTGCAGTACCCCTCCTCAGCACATTCGTTTACAT +
Preference number: 5 (lower is better)
Translates to: HTLLHTSTGKPLQCL*SPGCSTPPQHIRLH
Trigger: ATGTAAACGAATGTGCTGAGGAGGGGTACTGCAGCCAGGGCTGCACAAACACTGAAGGGGCTTTCCAGTGCTGGTGTGAAGCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp GAGATGACATTGTTGAGCCCAGGAACAGGAACGTGCACGTCTGTGTaGTCATCGGTGTCCAGTGAGATACGGCGAATAGAGCCTCGGCTA +
Preference number: 5 (lower is better)
Translates to: EMTLLSPGTGTCTSV*SSVSSEIRRIEPRL
Trigger: TAGCCGAGGCTCTATTCGCCGTATCTCACTGGACACCGATGACCACACAGACGTGCACGTTCCTGTTCCTGGGCTCAACAATGTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCCAGTCGTTGATCCCGTaGCACAGCTTCCTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: CKKILAPFHSGGHHASVSQSLIP*HSFLCP
Trigger: TGGGCAGAGGAAGCTGTGCAACGGGATCAACGACTG...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAATCCAGGTCTAAATTCTTGAGATGTGCCCTCACTTCTTGTCCCCAGGTAGTTTCTGGCCCCAGAGCTTaGCAGCTGCGCCGATCGGGC +
Preference number: 5 (lower is better)
Translates to: KSRSKFLRCALTSCPQVVSGPRA*QLRRSG
Trigger: GCCCGATCGGCGCAGCTGCAAAGCTCTGGGGCCAGA...AACTACCTGGGGACAAGAAGTGAGGGCACATCTCAAGAATTTAGACCTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCAGTTGGGAACTGGTCTaGTCCACAGTCAGTCCATTG +
Preference number: 5 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSSWELV*STVSPL
Trigger: CAATGGACTGACTGTGGACAAGACCAGTTCCCAACT...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTTGCCCGGTCAACAGCTaGGATGTCCATGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: NELKRFNLTILLLSPWVSCPVNS*DVHEAW
Trigger: CCAGGCCTCATGGACATCCAAGCTGTTGACCGGGCA...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTCTGTCCGTACTTGTCGACACGTaGGATCGATTTGGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FPSTQTSWAASSFSQPLSVLVDT*DRFGLP
Trigger: TGGCAGACCAAATCGATCCAACGTGTCGACAAGTAC...GGACAGAGGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTCTCAACCTTATACACGGCTGGCTaGGGAGCTGCTTCAAGTTTC +
Preference number: 5 (lower is better)
Translates to: WRFPKHPDQLGCFFLLSTLYTAG*GAASSF
Trigger: GAAACTTGAAGCAGCTCCCAAGCCAGCCGTGTATAA...GGTTGAGAGAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp GAGAGGGTACTGCTGAAGGGCAGCTTTCCTCATCAGAGCCATCTTTaGAGTCTGTGTCACCATCGCAGTACCAATGCTCAGCAATGCAGC +
Preference number: 5 (lower is better)
Translates to: ERVLLKGSFPHQSHL*SLCHHRSTNAQQCS
Trigger: GCTGCATTGCTGAGCATTGGTACTGCGATGGTGACACAGACTGCAAAGATGGCTCTGATGAGGAAAGCTGCCCTTCAGCAGTACCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp AGCAGAGTGAGGCCATATGGGTGCTGGACTGGTGACACCAGTGTATaGCGATTAGCGCCATTCAGGTCTGCCACCTCAATTCTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: SRVRPYGCWTGDTSV*RLAPFRSATSILSV
Trigger: TACTGAGAGAATTGAGGTGGCAGACCTGAATGGCGCTAATCGGCATACACTGGTGTCACCAGTCCAGCACCCATATGGCCTCACTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp CCTCAATTCTCTCAGTATGGGCATCAGCCCACAGCAGTTGGGAACTaGTCTTGTCCACAGTCAGTCCATTGGGCCACCCTAGGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: PQFSQYGHQPTAVGN*SCPQSVHWATLGCC
Trigger: ACAACAACCTAGGGTGGCCCAATGGACTGACTGTGGACAAGACCAGTTCCCAACTGCTGTGGGCTGATGCCCATACTGAGAGAATTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCATCATCAGAGCCATCTTaGCAGTCTGTGTCACCATCG +
Preference number: 5 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSSSEPS*QSVSPS
Trigger: CGATGGTGACACAGACTGCAAAGATGGCTCTGATGA...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAGTGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTCTGTCACCGCAGTCGTaGATCCCGTTGCACAGCTTC +
Preference number: 5 (lower is better)
Translates to: KCKKILAPFHSGGHHASVLSPQS*IPLHSF
Trigger: GAAGCTGTGCAACGGGATCAACGACTGCGGTGACAG...AACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp CTTGAGGCTGGAGGTTTCCCAAGCACCCAGACCAGCTGGGCTGCTTCTTCCTTCTTCTTCCCCGTAAACTaGTTGGCACTATTGATGCTC +
Preference number: 5 (lower is better)
Translates to: LEAGGFPSTQTSWAASSFFFPVN*LALLML
Trigger: GAGCATCAATAGTGCCAACAAGTTTACGGGGAAGAA...GAAGGAAGAAGCAGCCCAGCTGGTCTGGGTGCTTGGGAAACCTCCAGCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GGCCCCAGACATTCCAGCAGGAGGAAGAAGAGCCTAAGCCATTCCCACACTTCAGCAAAAAGCAGGAACTaGTCAAGACTCTGGGCACAG +
Preference number: 5 (lower is better)
Translates to: GPRHSSRRKKSLSHSHTSAKSRN*SRLWAQ
Trigger: CTGTGCCCAGAGTCTTGACAAGTTCCTGCTTTTTGC...TGAAGTGTGGGAATGGCTTAGGCTCTTCTTCCTCCTGCTGGAATGTCTGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp ACGTTCTACAAGTCTGCTCTCCAAGGCCCACCCAATGTTCACTCAAGCTCACAGTGGAACTCTTCCAGGTaGCAAGGAGGAGAGGGTACT +
Preference number: 5 (lower is better)
Translates to: TFYKSALQGPPNVHSSSQWNSSR*QGGEGT
Trigger: AGTACCCTCTCCTCCTTGCAACCTGGAAGAGTTCCA...CTGTGAGCTTGAGTGAACATTGGGTGGGCCTTGGAGAGCAGACTTGTAGAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAAATCTCAGCTCCCCTGAGAGAAGCCCTTGGCCTAAAGGAGCATGAAGCTAATTTGCTGCCATTAAGGTaGGCACGGAGGATGCGGTCC +
Preference number: 5 (lower is better)
Translates to: KISAPLREALGLKEHEANLLPLR*ARRMRS
Trigger: GGACCGCATCCTCCGTGCCAACCTTAATGGCAGCAA...ATTAGCTTCATGCTCCTTTAGGCCAAGGGCTTCTCTCAGGGGAGCTGAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTGGCCACCCTAGGTTGTaGTTGATGAGCACAGTACGG +
Preference number: 5 (lower is better)
Translates to: NELKRFNLTILLLSPWVSGHPRL*LMSTVR
Trigger: CCGTACTGTGCTCATCAACAACAACCTAGGGTGGCC...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGTCCACAGTCAGTCCATaGGGCCACCCTAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRSTVSP*GHPRLL
Trigger: CAACAACCTAGGGTGGCCCAATGGACTGACTGTGGA...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp CAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACATATCAGCCCACAGCAGTaGGGAACTGGTCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: QLVYWKRPLACSGSVCRHISPQQ*GTGLVH
Trigger: GTGGACAAGACCAGTTCCCAACTGCTGTGGGCTGAT...ATGTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAGTGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTATGAGGCCTGGCAGGTaGGACCTCACAAGGATGACA +
Preference number: 5 (lower is better)
Translates to: KCKKILAPFHSGGHHASVMRPGR*DLTRMT
Trigger: TGTCATCCTTGTGAGGTCCAACCTGCCAGGCCTCAT...AACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCTTTGCCCGTTCAATCTaGGCAATGTGGCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: CKKILAPFHSGGHHASVSFARSI*AMWPQS
Trigger: AGACTGGGGCCACATTGCCAAGATTGAACGGGCAAA...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAGTGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTAGTACTGTCTCCTTGTaGCGGCCCGAGTACTTGTCG +
Preference number: 5 (lower is better)
Translates to: KCKKILAPFHSGGHHASVSTVSL*RPEYLS
Trigger: CGACAAGTACTCGGGCCGCAACAAGGAGACAGTACT...AACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 90 bp GTGGGACAGGCACAGGAGAAACCAGAAGGCCGAGGTAAACAGAGGTaGGAACAGCCGCCATTTCTTGAGCCACATTTATTAAAACCCAGT +
Preference number: 5 (lower is better)
Translates to: VGQAQEKPEGRGKQR*EQPPFLEPHLLKPS
Trigger: ACTGGGTTTTAATAAATGTGGCTCAAGAAATGGCGGCTGTTCCCACCTCTGTTTACCTCGGCCTTCTGGTTTCTCCTGTGCCTGTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATCTGCAGCGGAATTCCTaGTCTGAGCACTTGCGCATG +
Preference number: 5 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYLQRNS*SEHLRM
Trigger: CATGCGCAAGTGCTCAGACAAGGAATTCCGCTGCAG...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AATGAACTCAAGAGGTTCAACCTCACAATTCTCCTCCTGAGCCCCTGGGTGTCTCCACCGTTGTTAACATaGCAGTTCTCCTCACCCGTC +
Preference number: 5 (lower is better)
Translates to: NELKRFNLTILLLSPWVSPPLLT*QFSSPV
Trigger: GACGGGTGAGGAGAACTGCAATGTTAACAACGGTGG...AGACACCCAGGGGCTCAGGAGGAGAATTGTGAGGTTGAACCTCTTGAGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TGCAAAAAGATCCTTGCCCCTTTCCACTCAGGAGGACACCACGCTTCTGTTTCCGCACTATTGATGCTCTaGGTGTGCCAGTCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: CKKILAPFHSGGHHASVSALLML*VCQSVQ
Trigger: TTGGACAGACTGGCACACCAAGAGCATCAATAGTGC...GGAAACAGAAGCGTGGTGTCCTCCTGAGTGGAAAGGGGCAAGGATCTTTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTGGCACATGACCTTTACCACCCGAGAGCCACAGGCTGTGTCCATGAACTTGGAAACTTGTTGGCACTATaGATGCTCTTGGTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LAHDLYHPRATGCVHELGNLLAL*MLLVCQ
Trigger: CTGGCACACCAAGAGCATCAATAGTGCCAACAAGTT...TCCAAGTTCATGGACACAGCCTGTGGCTCTCGGGTGGTAAAGGTCATGTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGGTGCAACCTCCATTGTaGTCCCCACAGCGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRVQPPL*SPQRFF
Trigger: GAAAAACCGCTGTGGGGACAACAATGGAGGTTGCAC...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp CTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTCTGGCTCTGTGTGCAGACCACCCTAGGTTGTTGTaGATGAGCACAGTACGGTCT +
Preference number: 5 (lower is better)
Translates to: LNWFTGKGHWPALALCADHPRLL*MSTVRS
Trigger: AGACCGTACTGTGCTCATCAACAACAACCTAGGGTG...GTCTGCACACAGAGCCAGAGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GTTTCCCTTAGAATCCCACAGAATGGAAGAGAGAAGAGTAGAATAGGTGAAGCTTCCAAGGTGAGGCCGTaGGGCCAGCCTAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: VSLRIPQNGREKSRIGEASKVRP*GQPRSV
Trigger: CACAGACCTAGGCTGGCCCAACGGCCTCACCTTGGA...AGCTTCACCTATTCTACTCTTCTCTCTTCCATTCTGTGGGATTCTAAGGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGCTTTCTGAGGAGAGCTaGCGTTCGTGTTTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRLSEES*RSCFQP
Trigger: AGGCTGGAAACACGAACGCAAGCTCTCCTCAGAAAG...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp GGATATCCAAGGAGACCATGCGAACATCAATCCTCCTGGCGAAGATaGGGAAACTGTTCATGCCTGGTGAGCATGTCTTGCCATCTCGTA +
Preference number: 5 (lower is better)
Translates to: GYPRRPCEHQSSWRR*GNCSCLVSMSCHLV
Trigger: TACGAGATGGCAAGACATGCTCACCAGGCATGAACAGTTTCCTCATCTTCGCCAGGAGGATTGATGTTCGCATGGTCTCCTTGGATATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATCAGCCGGTCAGCACTTaGTATACTCTTGGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYQPVST*YTLGLP
Trigger: TGGCAGACCAAGAGTATACAAAGTGCTGACCGGCTG...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTGCTCTCCAAGGCCCCATCTCGTAGCAGGTaGATACCTGTGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: YAFFAELLKRSTSLLSKAPSRSR*IPVGQV
Trigger: CACCTGCCCCACAGGTATCAACCTGCTACGAGATGG...GGCCTTGGAGAGCAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp CCAGCGGATCCACTCCAATGGCGATGGTGTTCTTCATGGTCATGTTaGTGGGTACCACCACATCAGCAAAATAAGGGATATCCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: PADPLQWRWCSSWSC*WVPPHQQNKGYPRR
Trigger: TCTCCTTGGATATCCCTTATTTTGCTGATGTGGTGGTACCCATCAACATGACCATGAAGAACACCATCGCCATTGGAGTGGATCCGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 90 bp GGTAGGAGGGGTTGCTATAGGTCAGGTTTCCCATTCCAGGATCCGTaGACTTGGATTTTCTGTGTCTGTATAGCATCAAAGCCGCGATCA +
Preference number: 5 (lower is better)
Translates to: GRRGCYRSGFPFQDP*TWIFCVCIASKPRS
Trigger: TGATCGCGGCTTTGATGCTATACAGACACAGAAAATCCAAGTTCACGGATCCTGGAATGGGAAACCTGACCTATAGCAACCCCTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 90 bp CTCTTTCTTATAGCACAGCTGATTATACACGGCTGGCTTGGGAGCTaGTTCAAGTTTCACTTCCTGAGTGGAAGTTCGGTAGGAGGGGTT +
Preference number: 5 (lower is better)
Translates to: LFLIAQLIIHGWLGS*FKFHFLSGSSVGGV
Trigger: AACCCCTCCTACCGAACTTCCACTCAGGAAGTGAAACTTGAAGCAGCTCCCAAGCCAGCCGTGTATAATCAGCTGTGCTATAAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCCAGCGCCAGCCCGAGTaGATGCACAGGCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPQRQPE*MHRPLS
Trigger: TGACAGTGGCCTGTGCATCAACTCGGGCTGGCGCTG...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp ACGTTCTACAAGTCTGCTCTCCAAGGCCCACCCAATGTTCACTCAAGCTCACAGATAGGAAAGTGGAGCTaGTTGCGAATGATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TFYKSALQGPPNVHSSSQIGKWS*LRMISW
Trigger: CCAGGAAATCATTCGCAACAAGCTCCACTTTCCTAT...CTGTGAGCTTGAGTGAACATTGGGTGGGCCTTGGAGAGCAGACTTGTAGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GTTTCCCTTAGAATCCCACAGAATGGAAGAGAGAAGAGTAGAATAGGTGAAGCTCCAGCCCGTTCAATCTaGGGACTTGCACCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: VSLRIPQNGREKSRIGEAPARSI*GLAPQS
Trigger: TGACTGGGGTGCAAGTCCCAAGATTGAACGGGCTGG...AGCTTCACCTATTCTACTCTTCTCTCTTCCATTCTGTGGGATTCTAAGGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TTATGTGAGCACAAGGATCAGAAGTCCACAGAGGAGAATGAACAGGCAGGCAGGATAGACCCATCCAGGTaGCCAACTTCAATCCGATTC +
Preference number: 5 (lower is better)
Translates to: LCEHKDQKSTEENEQAGRIDPSR*PTSIRF
Trigger: GAATCGGATTGAAGTTGGCAACCTGGATGGGTCTAT...CCTGCCTGCCTGTTCATTCTCCTCTGTGGACTTCTGATCCTTGTGCTCACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GCTAAAGGCTTAAGAAAAGTACGGCCCATCACAGCACCAGGAGGGAATTCCTATGCACTTTGTATACTCTaGGTCTGCCAGTCAGTCCAA +
Preference number: 5 (lower is better)
Translates to: AKGLRKVRPITAPGGNSYALCIL*VCQSVQ
Trigger: TTGGACTGACTGGCAGACCAAGAGTATACAAAGTGC...ATAGGAATTCCCTCCTGGTGCTGTGATGGGCCGTACTTTTCTTAAGCCTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCAAGCCCCTTCAGTGTTaGTGCAGCCCTGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPKPLQC*CSPGCS
Trigger: ACTGCAGCCAGGGCTGCACAAACACTGAAGGGGCTT...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp GTTTCCCTTAGAATCCCACAGAATGGAAGAGAGAAGAGTAGAATAGGTGAAGCTATTAGTACCTTCCTCTaGCTGCCATCCAGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VSLRIPQNGREKSRIGEAISTFL*LPSSPA
Trigger: TGCTGGGCTGGATGGCAGCAAGAGGAAGGTACTAAT...AGCTTCACCTATTCTACTCTTCTCTCTTCCATTCTGTGGGATTCTAAGGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAAATCTCAGCTCCCCTGAGAGAAGCCCTTGGCCTAAAGGAGCATGAAGCTAATTTCTTCATGGTCATGTaGATGGGTACCACCACATCA +
Preference number: 5 (lower is better)
Translates to: KISAPLREALGLKEHEANFFMVM*MGTTTS
Trigger: TGATGTGGTGGTACCCATCAACATGACCATGAAGAA...ATTAGCTTCATGCTCCTTTAGGCCAAGGGCTTCTCTCAGGGGAGCTGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TATGCTTTCTTTGCAGAGCTTCTTAAACGTTCTACAAGTCTGCTCTCCAAGGCCTTGGGCCACCCTAGGTaGTTGTTGATGAGCACAGTA +
Preference number: 5 (lower is better)
Translates to: YAFFAELLKRSTSLLSKALGHPR*LLMSTV
Trigger: TACTGTGCTCATCAACAACAACCTAGGGTGGCCCAA...GGCCTTGGAGAGCAGACTTGTAGAACGTTTAAGAAGCTCTGCAAAGAAAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAATCCAGGTCTAAATTCTTGAGATGTGCCCTCACTTCTTGTCCCCAGGTAGTTTCTAGGGAGATGACATaGTTGAGCCCAGGAACAGGA +
Preference number: 5 (lower is better)
Translates to: KSRSKFLRCALTSCPQVVSREMT*LSPGTG
Trigger: TCCTGTTCCTGGGCTCAACAATGTCATCTCCCTAGA...AACTACCTGGGGACAAGAAGTGAGGGCACATCTCAAGAATTTAGACCTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCGCCAGTACTGTCTCCTaGTTGCGGCCCGAGTACTTG +
Preference number: 5 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPASTVS*LRPEYL
Trigger: CAAGTACTCGGGCCGCAACAAGGAGACAGTACTGGC...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTAGAGAGGTGCGGGTCTaGGTGGTAGAAGAATGTAAG +
Preference number: 5 (lower is better)
Translates to: KWHCTFLNWFTGKGHWPAREVRV*VVEECK
Trigger: CTTACATTCTTCTACCACCAAGACCCGCACCTCTCT...AGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp TGTCCATCTTTCCTCTTAGAAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGATGGAGGTGGTGCAGTaGCGTTCATCAGACTGGTCA +
Preference number: 5 (lower is better)
Translates to: CPSFLLEVALYFSQLVYWMEVVQ*RSSDWS
Trigger: TGACCAGTCTGATGAACGCAACTGCACCACCTCCAT...CCAGTAAACCAATTGAGAAAAGTACAGTGCCACTTCTAAGAGGAAAGATGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCATGCTGCCATCTGTGTaGGCCACTTCGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPMLPSV*ATSILS
Trigger: GGACAGGATCGAAGTGGCCAACACAGATGGCAGCAT...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AAGTGGCACTGTACTTTTCTCAATTGGTTTACTGGAAAAGGCCATTGGCCTGCTTTCCCCGTAAACTTGTaGGCACTATTGATGCTCTTG +
Preference number: 5 (lower is better)
Translates to: KWHCTFLNWFTGKGHWPAFPVNL*ALLMLL
Trigger: CAAGAGCATCAATAGTGCCAACAAGTTTACGGGGAA...AGCAGGCCAATGGCCTTTTCCAGTAAACCAATTGAGAAAAGTACAGTGCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS-3UTR CAA 90 bp AGTGCTCAAATAGATATTTCCTCAAATTCGTCCTTTCTACATTCTGAACAGCCCCAGCCTAGGTCTGTGTaGATGAGGACCTTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: SAQIDISSNSSFLHSEQPQPRSV*MRTFLS
Trigger: TGAGAGGAAGGTCCTCATCAACACAGACCTAGGCTG...GGGCTGTTCAGAATGTAGAAAGGACGAATTTGAGGAAATATCTATTTGAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp TGTGAGCCGGTAGCCTGTGTGGCAGGTACACTGCACTaGCCCTCGCACCATCTGACACTTCTGGGCACAGCC +
Preference number: 6 (lower is better)
Translates to: CEPVACVAGTLH*PSHHLTLLGTA
Trigger: GGCTGTGCCCAGAAGTGTCAGATGGTGCGAGGGGCAGTGCAGTGTACCTGCCACACAGGCTACCGGCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp GGGTGTAGGGCAATGGCTCTGGGCTTCTCTAGGCTCTaGCATAGCAGCACCTTCCGGTGGGCCCCATCCAGA +
Preference number: 6 (lower is better)
Translates to: GCRAMALGFSRL*HSSTFRWAPSR
Trigger: TCTGGATGGGGCCCACCGGAAGGTGCTGCTATGGCAGAGCCTAGAGAAGCCCAGAGCCATTGCCCTACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp GGAACTTGTCAAGACTCTGGGCACAGGCGTGGCTGTTaGTCTTGCGGAAGCCGGTGGGGCAGGCACAGGTGT +
Preference number: 6 (lower is better)
Translates to: GTCQDSGHRRGC*SCGSRWGRHRC
Trigger: ACACCTGTGCCTGCCCCACCGGCTTCCGCAAGATCAACAGCCACGCCTGTGCCCAGAGTCTTGACAAGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp GCAGGAGGTACGAGGCCAGGTACAAGGGAGCAGGGATaGCCGTCAGGCTCATCAGGACACGCGCACACAAAG +
Preference number: 6 (lower is better)
Translates to: AGGTRPGTREQG*PSGSSGHAHTK
Trigger: CTTTGTGTGCGCGTGTCCTGATGAGCCTGACGGTCATCCCTGCTCCCTTGTACCTGGCCTCGTACCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp CGCGCTCACCGCACATGTGAAGTGGCTCCGACCACATaGACACTCCAGACTGCTGGCTATTCCGTGTGCGCA +
Preference number: 6 (lower is better)
Translates to: RAHRTCEVAPTT*TLQTAGYSVCA
Trigger: TGCGCACACGGAATAGCCAGCAGTCTGGAGTGTGCATGTGGTCGGAGCCACTTCACATGTGCGGTGAGCGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp TTGCAGTTCTCCTCACCCGTCCGGGGCCGACAGTTCTaGTGTGGACTTTCGTCACTGCTGTCACCGCAGTCG +
Preference number: 6 (lower is better)
Translates to: LQFSSPVRGRQF*CGLSSLLSPQS
Trigger: CGACTGCGGTGACAGCAGTGACGAAAGTCCACAGCAGAACTGTCGGCCCCGGACGGGTGAGGAGAACTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp TGGCAAACAGTAGCACAGGTTCTGGCCCCAGAGCTTTaGAGCTGCGCCGATCGGGCCGTAGCTCATACCCTG +
Preference number: 6 (lower is better)
Translates to: WQTVAQVLAPEL*SCADRAVAHTL
Trigger: CAGGGTATGAGCTACGGCCCGATCGGCGCAGCTGCAAAGCTCTGGGGCCAGAACCTGTGCTACTGTTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp CCAGTCAAGGGCCACAGCACTGCGCACGTCAGCCAGTaGGATGACATCGTCGGACAGGTCCTCTGTGTCGAA +
Preference number: 6 (lower is better)
Translates to: PVKGHSTAHVSQ*DDIVGQVLCVE
Trigger: TTCGACACAGAGGACCTGTCCGACGATGTCATCCCACTGGCTGACGTGCGCAGTGCTGTGGCCCTTGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp GCAGCCGCCATTCTCCACGGCACACAGCGTCGTCACTaGAGGCCTCTGGCGGTGGAAGACATGAATGTCCAT +
Preference number: 6 (lower is better)
Translates to: AAAILHGTQRRH*RPLAVEDMNVH
Trigger: ATGGACATTCATGTCTTCCACCGCCAGAGGCCTCCAGTGACGACGCTGTGTGCCGTGGAGAATGGCGGCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp CTGAAGCCGCTCGGATTTGGGGACCTGAGACACAAATaGCTGCAGCCGCCATTCTCCACGGCACACAGCGTC +
Preference number: 6 (lower is better)
Translates to: LKPLGFGDLRHK*LQPPFSTAHSV
Trigger: GACGCTGTGTGCCGTGGAGAATGGCGGCTGCAGCCATTTGTGTCTCAGGTCCCCAAATCCGAGCGGCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp GAGCGGTGCGGGAGCACCTGCCGGATGTCGATACGATaGGCAAACAGTAGCACAGGTTCTGGCCCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: ERCGSTCRMSIR*ANSSTGSGPRA
Trigger: AGCTCTGGGGCCAGAACCTGTGCTACTGTTTGCCAATCGTATCGACATCCGGCAGGTGCTCCCGCACCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp AGGAACTTGTCAAGACTCTGGGCACAGGCGTGGCTGTaGATCTTGCGGAAGCCGGTGGGGCAGGCACAGGTG +
Preference number: 6 (lower is better)
Translates to: RNLSRLWAQAWL*ILRKPVGQAQV
Trigger: CACCTGTGCCTGCCCCACCGGCTTCCGCAAGATCAACAGCCACGCCTGTGCCCAGAGTCTTGACAAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp AGGCCCCCTGGGCTCTCTAGCCCAGTAGACACCACCTCCTCTACATaGCTGCCATTAAGGTTGGCACGGAGGATGCGGTCCAGGGTGACA +
Preference number: 6 (lower is better)
Translates to: RPPGLSSPVDTTSST*LPLRLARRMRSRVT
Trigger: TGTCACCCTGGACCGCATCCTCCGTGCCAACCTTAATGGCAGCAATGTAGAGGAGGTGGTGTCTACTGGGCTAGAGAGCCCAGGGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp TGGATGTCCATGAGGCCTGGCAGGTTGGACCTCACAAGGATGACATaGCTGCCAGTACTCTTGTCGGCCCGGTGGATGCTGCGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: WMSMRPGRLDLTRMT*LPVLLSARWMLRVC
Trigger: GCAGACCCGCAGCATCCACCGGGCCGACAAGAGTACTGGCAGCAATGTCATCCTTGTGAGGTCCAACCTGCCAGGCCTCATGGACATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp GGATGTGGGAGGCCCTGGCTAATGACAGCCTTGCGGTaGCTCCCATCTAGATTGGCCCTCTCGATGACGTGG +
Preference number: 6 (lower is better)
Translates to: GCGRPWLMTALR*LPSRLALSMTW
Trigger: CCACGTCATCGAGAGGGCCAATCTAGATGGGAGTCACCGCAAGGCTGTCATTAGCCAGGGCCTCCCACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp TCCAGGTTGTTCAGTAGCAGCGTGTACTCGGAGCGGTaGGGGAGCACCTGCCGGATGTCGATACGATTGGCA +
Preference number: 6 (lower is better)
Translates to: SRLFSSSVYSER*GSTCRMSIRLA
Trigger: TGCCAATCGTATCGACATCCGGCAGGTGCTCCCGCACCGCTCCGAGTACACGCTGCTACTGAACAACCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp GTACATTCGCCAAGCGCGCTCACCGCACATGTGAAGTaGCTCCGACCACATGCACACTCCAGACTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: VHSPSALTAHVK*LRPHAHSRLLA
Trigger: AGCCAGCAGTCTGGAGTGTGCATGTGGTCGGAGCCACTTCACATGTGCGGTGAGCGCGCTTGGCGAATGTAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp CTCTGCCCAATACAGCGCCCGTTCCAACACAGGAACTaGTCAGAGGCGCACTGGGGGCTTCCTGTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: LCPIQRPFQHRN*SEAHWGLPVFS
Trigger: TGAGAACACAGGAAGCCCCCAGTGCGCCTCTGACCAGTTCCTGTGTTGGAACGGGCGCTGTATTGGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp GTTCTCCTCACCCGTCCGGGGCCGACAGTTCTGCTGTaGACTTTCGTCACTGCTGTCACCGCAGTCGTTGAT +
Preference number: 6 (lower is better)
Translates to: VLLTRPGPTVLL*TFVTAVTAVVD
Trigger: ATCAACGACTGCGGTGACAGCAGTGACGAAAGTCCACAGCAGAACTGTCGGCCCCGGACGGGTGAGGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp TCGGGCCGTAGCTCATACCCTGCTTCACACCAGCACTaGAAAGCCCCTTCAGTGTTTGTGCAGCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SGRSSYPASHQH*KAPSVFVQPWL
Trigger: CAGCCAGGGCTGCACAAACACTGAAGGGGCTTTCCAGTGCTGGTGTGAAGCAGGGTATGAGCTACGGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp AGCGGTGCGGGAGCACCTGCCGGATGTCGATACGATTaGCAAACAGTAGCACAGGTTCTGGCCCCAGAGCTT +
Preference number: 6 (lower is better)
Translates to: SGAGAPAGCRYD*QTVAQVLAPEL
Trigger: AAGCTCTGGGGCCAGAACCTGTGCTACTGTTTGCCAATCGTATCGACATCCGGCAGGTGCTCCCGCACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TTGGCAAACAGTAGCACAGGTTCTGGCCCCAGAGCTTaGCAGCTGCGCCGATCGGGCCGTAGCTCATACCCT +
Preference number: 6 (lower is better)
Translates to: LANSSTGSGPRA*QLRRSGRSSYP
Trigger: AGGGTATGAGCTACGGCCCGATCGGCGCAGCTGCAAAGCTCTGGGGCCAGAACCTGTGCTACTGTTTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TGCAGTCCTTCACCTGGAGCAGCAGGGACGGCTTCATaGGAATGTGCACAGAGGCCCAGCTGGGCATCCCTT +
Preference number: 6 (lower is better)
Translates to: CSPSPGAAGTAS*ECAQRPSWASL
Trigger: AAGGGATGCCCAGCTGGGCCTCTGTGCACATTCCAATGAAGCCGTCCCTGCTGCTCCAGGTGAAGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp GGCTGTGCCCGGTCAACAGCTTGGATGTCCATGAGGCCTGGCAGGTaGGACCTCACAAGGATGACATTGCTGCCAGTACTCTTGTCGGCC +
Preference number: 6 (lower is better)
Translates to: GCARSTAWMSMRPGR*DLTRMTLLPVLLSA
Trigger: GGCCGACAAGAGTACTGGCAGCAATGTCATCCTTGTGAGGTCCAACCTGCCAGGCCTCATGGACATCCAAGCTGTTGACCGGGCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp TGCTGTGGACTTTCGTCACTGCTGTCACCGCAGTCGTTGATCCCGTaGCACAGCTTCCTCTGCCCAATACAGCGCCCGTTCCAACACAGG +
Preference number: 6 (lower is better)
Translates to: CCGLSSLLSPQSLIP*HSFLCPIQRPFQHR
Trigger: CCTGTGTTGGAACGGGCGCTGTATTGGGCAGAGGAAGCTGTGCAACGGGATCAACGACTGCGGTGACAGCAGTGACGAAAGTCCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp CGACAGTTCTGCTGTGGACTTTCGTCACTGCTGTCACCGCAGTCGTaGATCCCGTTGCACAGCTTCCTCTGCCCAATACAGCGCCCGTTC +
Preference number: 6 (lower is better)
Translates to: RQFCCGLSSLLSPQS*IPLHSFLCPIQRPF
Trigger: GAACGGGCGCTGTATTGGGCAGAGGAAGCTGTGCAACGGGATCAACGACTGCGGTGACAGCAGTGACGAAAGTCCACAGCAGAACTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp TCGATACGATTGGCAAACAGTAGCACAGGTTCTGGCCCCAGAGCTTaGCAGCTGCGCCGATCGGGCCGTAGCTCATACCCTGCTTCACAC +
Preference number: 6 (lower is better)
Translates to: SIRLANSSTGSGPRA*QLRRSGRSSYPASH
Trigger: GTGTGAAGCAGGGTATGAGCTACGGCCCGATCGGCGCAGCTGCAAAGCTCTGGGGCCAGAACCTGTGCTACTGTTTGCCAATCGTATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp TACAGGTACATTCGCCAAGCGCGCTCACCGCACATGTaGAGTGGCTCCGACCACATGCACACTCCAGACTGC +
Preference number: 6 (lower is better)
Translates to: YRYIRQARSPHM*SGSDHMHTPDC
Trigger: GCAGTCTGGAGTGTGCATGTGGTCGGAGCCACTTCACATGTGCGGTGAGCGCGCTTGGCGAATGTACCTGTA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp CCACCCAGTACATGCGGCGACCAGCGTAGTCGATGGTaGGGCCGTTGGGCCAGAAAAGATGAGTGTCAGCAA +
Preference number: 6 (lower is better)
Translates to: PPSTCGDQRSRW*GRWARKDECQQ
Trigger: TTGCTGACACTCATCTTTTCTGGCCCAACGGCCTCACCATCGACTACGCTGGTCGCCGCATGTACTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp CTGGAGGCCTCTGGCGGTGGAAGACATGAATGTCCATaGGGTTCTCCAGGTTCTCCTGCAGAGTCTCCCGGT +
Preference number: 6 (lower is better)
Translates to: LEASGGGRHECP*GSPGSPAESPG
Trigger: ACCGGGAGACTCTGCAGGAGAACCTGGAGAACCTCATGGACATTCATGTCTTCCACCGCCAGAGGCCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp TGTCCTCATGCTGTGAGCCATCCAGGCTGGCACGGCTaGTCCTGTGCAGCGTGCTGTCAGACCAGTACACTT +
Preference number: 6 (lower is better)
Translates to: CPHAVSHPGWHG*SCAACCQTSTL
Trigger: AAGTGTACTGGTCTGACAGCACGCTGCACAGGATCAGCCGTGCCAGCCTGGATGGCTCACAGCATGAGGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp AGTAGCAGCGTGTACTCGGAGCGGTGCGGGAGCACCTaGCGGATGTCGATACGATTGGCAAACAGTAGCACA +
Preference number: 6 (lower is better)
Translates to: SSSVYSERCGST*RMSIRLANSST
Trigger: TGTGCTACTGTTTGCCAATCGTATCGACATCCGGCAGGTGCTCCCGCACCGCTCCGAGTACACGCTGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp TGCTGTGAGCCATCCAGGCTGGCACGGCTGATCCTGTaGAGCGTGCTGTCAGACCAGTACACTTTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: CCEPSRLARLIL*SVLSDQYTFPS
Trigger: GGAAGGAAAAGTGTACTGGTCTGACAGCACGCTGCACAGGATCAGCCGTGCCAGCCTGGATGGCTCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp CGGCCGATGGCATCCACTGCAAGCCCGTCTGTGGTCTaGAGACCTGTAGTGATGATGTCCTCATGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: RPMASTASPSVV*RPVVMMSSCCE
Trigger: CTCACAGCATGAGGACATCATCACTACAGGTCTGCAGACCACAGACGGGCTTGCAGTGGATGCCATCGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp AGGGGTCACAGGTCTTCCTGTCTCCCTTCAGCTGAATaGCAGTGGGACAGGCACAGGAGAAACCAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RGHRSSCLPSAE*QWDRHRRNQKA
Trigger: GGCCTTCTGGTTTCTCCTGTGCCTGTCCCACTGGCATTCAGCTGAAGGGAGACAGGAAGACCTGTGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp TGTGTCTGGCAGAGAGCCCCGTCTCTCCGGAGTGGCTaGAGTGTGAACACTGCTACACTCAGACTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: CVWQRAPSLRSG*SVNTATLRLLF
Trigger: GAAGAGCAGTCTGAGTGTAGCAGTGTTCACACTGCAGCCACTCCGGAGAGACGGGGCTCTCTGCCAGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp CTGTGCCCGGTCAACAGCTTGGATGTCCATGAGGCCTaGCAGGTTGGACCTCACAAGGATGACATTGCTGCC +
Preference number: 6 (lower is better)
Translates to: LCPVNSLDVHEA*QVGPHKDDIAA
Trigger: GGCAGCAATGTCATCCTTGTGAGGTCCAACCTGCCAGGCCTCATGGACATCCAAGCTGTTGACCGGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp CTTTCGTCACTGCTGTCACCGCAGTCGTTGATCCCGTaGCACAGCTTCCTCTGCCCAATACAGCGCCCGTTC +
Preference number: 6 (lower is better)
Translates to: LSSLLSPQSLIP*HSFLCPIQRPF
Trigger: GAACGGGCGCTGTATTGGGCAGAGGAAGCTGTGCAACGGGATCAACGACTGCGGTGACAGCAGTGACGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp GGGCTCTCTAGCCCAGTAGACACCACCTCCTCTACATaGCTGCCATTAAGGTTGGCACGGAGGATGCGGTCC +
Preference number: 6 (lower is better)
Translates to: GLSSPVDTTSST*LPLRLARRMRS
Trigger: GGACCGCATCCTCCGTGCCAACCTTAATGGCAGCAATGTAGAGGAGGTGGTGTCTACTGGGCTAGAGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TTGGACCTCACAAGGATGACATTGCTGCCAGTACTCTaGTCGGCCCGGTGGATGCTGCGGGTCTGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: LDLTRMTLLPVL*SARWMLRVCQS
Trigger: TGACTGGCAGACCCGCAGCATCCACCGGGCCGACAAGAGTACTGGCAGCAATGTCATCCTTGTGAGGTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp ATGAGGCCTGGCAGGTTGGACCTCACAAGGATGACATaGCTGCCAGTACTCTTGTCGGCCCGGTGGATGCTG +
Preference number: 6 (lower is better)
Translates to: MRPGRLDLTRMT*LPVLLSARWML
Trigger: CAGCATCCACCGGGCCGACAAGAGTACTGGCAGCAATGTCATCCTTGTGAGGTCCAACCTGCCAGGCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp TCTAGCCCAGTAGACACCACCTCCTCTACATTGCTGCCATTAAGGTaGGCACGGAGGATGCGGTCCAGGGTGACATCCGACCAGAAGACC +
Preference number: 6 (lower is better)
Translates to: SSPVDTTSSTLLPLR*ARRMRSRVTSDQKT
Trigger: GGTCTTCTGGTCGGATGTCACCCTGGACCGCATCCTCCGTGCCAACCTTAATGGCAGCAATGTAGAGGAGGTGGTGTCTACTGGGCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp AAGGGGTGGGACACATGGCTGACCAAGACCTGCCTCAGCTTCCCATaGAGGTCAGCACTCTCGATCCGATCCAGATGTGCATCTACCCAG +
Preference number: 6 (lower is better)
Translates to: KGWDTWLTKTCLSFP*RSALSIRSRCASTQ
Trigger: CTGGGTAGATGCACATCTGGATCGGATCGAGAGTGCTGACCTCAATGGGAAGCTGAGGCAGGTCTTGGTCAGCCATGTGTCCCACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp GGCCAGTACTGTCTCCTTGTTGCGGCCCGAGTACTTGTCGACACGTaGGATCGATTTGGTCTGCCAGTCCGTCCAGTAGATCCACCTGTC +
Preference number: 6 (lower is better)
Translates to: GQYCLLVAARVLVDT*DRFGLPVRPVDPPV
Trigger: GACAGGTGGATCTACTGGACGGACTGGCAGACCAAATCGATCCAACGTGTCGACAAGTACTCGGGCCGCAACAAGGAGACAGTACTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp GCTGTGGACTTTCGTCACTGCTGTCACCGCAGTCGTTaGTCCCGTTGCACAGCTTCCTCTGCCCAATACAGC +
Preference number: 6 (lower is better)
Translates to: AVDFRHCCHRSR*SRCTASSAQYS
Trigger: GCTGTATTGGGCAGAGGAAGCTGTGCAACGGGATCAACGACTGCGGTGACAGCAGTGACGAAAGTCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp GTGTGGCAGGTACACTGCACTGCCCCTCGCACCATCTaGCACTTCTGGGCACAGCCACCGTTGTTAACATTG +
Preference number: 6 (lower is better)
Translates to: VWQVHCTAPRTI*HFWAQPPLLTL
Trigger: CAATGTTAACAACGGTGGCTGTGCCCAGAAGTGTCAGATGGTGCGAGGGGCAGTGCAGTGTACCTGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp AGTCGTTGTCCCCATCACAGTGCCACAGACTCCGAATaGAGTAGCCGTTCTGGCAGGGGAATTCGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SRCPHHSATDSE*SSRSGRGIRPP
Trigger: AGGAGGACGAATTCCCCTGCCAGAACGGCTACTGCATTCGGAGTCTGTGGCACTGTGATGGGGACAACGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp CGCAGTACCAATGCTCAGCAATGCAGCTGCCGTCGCTaGAGCGGAATTCCTTGTCTGAGCACTTGCGCATGT +
Preference number: 6 (lower is better)
Translates to: RSTNAQQCSCRR*SGIPCLSTCAC
Trigger: ACATGCGCAAGTGCTCAGACAAGGAATTCCGCTGCAGCGACGGCAGCTGCATTGCTGAGCATTGGTACTGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp AGTCGTCATCTCCGTCACAGTGGTAGATGTCGAGGATaGAGCGGCCATAGGCGCACTGGAACTCTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: SRHLRHSGRCRG*SGHRRTGTLPG
Trigger: ACCTGGAAGAGTTCCAGTGCGCCTATGGCCGCTGCATCCTCGACATCTACCACTGTGACGGAGATGACGACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp GGCCTGACCGACAGCGAAACTGTTCGGCTGTGCACATaGAGGTGGTGCAGTTGCGTTCATCAGACTGGTCAT +
Preference number: 6 (lower is better)
Translates to: GLTDSETVRLCT*RWCSCVHQTGH
Trigger: ATGACCAGTCTGATGAACGCAACTGCACCACCTCCATGTGCACAGCCGAACAGTTTCGCTGTCGGTCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp AGACCAGCTCCCGCCGGTGATGAAAGTCGAGGGCAATaGCGTTCTCCAGGTTGTTCAGTAGCAGCGTGTACT +
Preference number: 6 (lower is better)
Translates to: RPAPAGDESRGQ*RSPGCSVAACT
Trigger: AGTACACGCTGCTACTGAACAACCTGGAGAACGCCATTGCCCTCGACTTTCATCACCGGCGGGAGCTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp AAATGGTTCCCTCCATGGGGTGTAGGGCAATGGCTCTaGGCTTCTCTAGGCTCTGCCATAGCAGCACCTTCC +
Preference number: 6 (lower is better)
Translates to: KWFPPWGVGQWL*ASLGSAIAAPS
Trigger: GGAAGGTGCTGCTATGGCAGAGCCTAGAGAAGCCCAGAGCCATTGCCCTACACCCCATGGAGGGAACCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp AATGCAGCTGCCGTCGCTGCAGCGGAATTCCTTGTCTaGGCACTTGCGCATGTCGCATTGCTCGTCACTGTT +
Preference number: 6 (lower is better)
Translates to: NAAAVAAAEFLV*ALAHVALLVTV
Trigger: AACAGTGACGAGCAATGCGACATGCGCAAGTGCTCAGACAAGGAATTCCGCTGCAGCGACGGCAGCTGCATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp ATTCGTTTACATCCTGGCACGTTCTCCCATCCTCTGTaGGCCGGTAGCCTGTGTGGCAGGTACACTGCACTG +
Preference number: 6 (lower is better)
Translates to: IRLHPGTFSHPL*AGSLCGRYTAL
Trigger: CAGTGCAGTGTACCTGCCACACAGGCTACCGGCTCACAGAGGATGGGAGAACGTGCCAGGATGTAAACGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp AGTCTGTGTCACCATCGCAGTACCAATGCTCAGCAATaGAGCTGCCGTCGCTGCAGCGGAATTCCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: SLCHHRSTNAQQ*SCRRCSGIPCL
Trigger: CAGACAAGGAATTCCGCTGCAGCGACGGCAGCTGCATTGCTGAGCATTGGTACTGCGATGGTGACACAGACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp TGTTGCCCCAGTCTGTCCAATAAATGGTTCCCTCCATaGGGTGTAGGGCAATGGCTCTGGGCTTCTCTAGGC +
Preference number: 6 (lower is better)
Translates to: CCPSLSNKWFPP*GVGQWLWASLG
Trigger: GCCTAGAGAAGCCCAGAGCCATTGCCCTACACCCCATGGAGGGAACCATTTATTGGACAGACTGGGGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp CTGATGGTATCAGTGCTGACATCTGTCCAATACACGTaGTCATCCCGGGAGTCCCAGTCAAGGGCCACAGCA +
Preference number: 6 (lower is better)
Translates to: LMVSVLTSVQYT*SSRESQSRATA
Trigger: TGCTGTGGCCCTTGACTGGGACTCCCGGGATGACCACGTGTATTGGACAGATGTCAGCACTGATACCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp TCTCAGTATGGGCATCAGCCCACAGCAGTTGGGAACTaGTCTTGTCCACAGTCAGTCCATTGGGCCACCCTA +
Preference number: 6 (lower is better)
Translates to: SQYGHQPTAVGN*SCPQSVHWATL
Trigger: TAGGGTGGCCCAATGGACTGACTGTGGACAAGACCAGTTCCCAACTGCTGTGGGCTGATGCCCATACTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp GCGCCATTCAGGTCTGCCACCTCAATTCTCTCAGTATaGGCATCAGCCCACAGCAGTTGGGAACTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: APFRSATSILSV*ASAHSSWELVL
Trigger: CAAGACCAGTTCCCAACTGCTGTGGGCTGATGCCCATACTGAGAGAATTGAGGTGGCAGACCTGAATGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp TCCTCTCAGAGCCATCCAGGTTTGCCCGTTCAATCTTaGCAATGTGGCCCCAGTCTGTCCAGAAGAGGTACC +
Preference number: 6 (lower is better)
Translates to: SSQSHPGLPVQS*QCGPSLSRRGT
Trigger: GGTACCTCTTCTGGACAGACTGGGGCCACATTGCCAAGATTGAACGGGCAAACCTGGATGGCTCTGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp GCTGCTCTGTCTCCGTGTCATCTAGGGAGCCAGAGCTaGCCTGGATGGACACTGTGTCTGTCTTCATGCATA +
Preference number: 6 (lower is better)
Translates to: AALSPCHLGSQS*PGWTLCLSSCI
Trigger: TATGCATGAAGACAGACACAGTGTCCATCCAGGCCAGCTCTGGCTCCCTAGATGACACGGAGACAGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TGCTGTGGACTTTCGTCACTGCTGTCACCGCAGTCGTaGATCCCGTTGCACAGCTTCCTCTGCCCAATACAG +
Preference number: 6 (lower is better)
Translates to: CCGLSSLLSPQS*IPLHSFLCPIQ
Trigger: CTGTATTGGGCAGAGGAAGCTGTGCAACGGGATCAACGACTGCGGTGACAGCAGTGACGAAAGTCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TCCATTAGGCCAGGTCAGGTTCGAAGAGATGATGACTaGTCGGCTGGAGGCGTCCATGCCAGCCCGTTCAAT +
Preference number: 6 (lower is better)
Translates to: SIRPGQVRRDDD*SAGGVHASPFN
Trigger: ATTGAACGGGCTGGCATGGACGCCTCCAGCCGACAAGTCATCATCTCTTCGAACCTGACCTGGCCTAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp CGGTCAACAGCTTGGATGTCCATGAGGCCTGGCAGGTaGGACCTCACAAGGATGACATTGCTGCCAGTACTC +
Preference number: 6 (lower is better)
Translates to: RSTAWMSMRPGR*DLTRMTLLPVL
Trigger: GAGTACTGGCAGCAATGTCATCCTTGTGAGGTCCAACCTGCCAGGCCTCATGGACATCCAAGCTGTTGACCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp GACACATGGCTGACCAAGACCTGCCTCAGCTTCCCATaGAGGTCAGCACTCTCGATCCGATCCAGATGTGCA +
Preference number: 6 (lower is better)
Translates to: DTWLTKTCLSFP*RSALSIRSRCA
Trigger: TGCACATCTGGATCGGATCGAGAGTGCTGACCTCAATGGGAAGCTGAGGCAGGTCTTGGTCAGCCATGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TTGGCCAGTACTGTCTCCTTGTTGCGGCCCGAGTACTaGTCGACACGTTGGATCGATTTGGTCTGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: LASTVSLLRPEY*STRWIDLVCQS
Trigger: GGACTGGCAGACCAAATCGATCCAACGTGTCGACAAGTACTCGGGCCGCAACAAGGAGACAGTACTGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp TACCAATGCTCAGCAATGCAGCTGCCGTCGCTGCAGCGGAATTCCTaGTCTGAGCACTTGCGCATGTCGCATTGCTCGTCACTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: YQCSAMQLPSLQRNS*SEHLRMSHCSSLLS
Trigger: TGACAACAGTGACGAGCAATGCGACATGCGCAAGTGCTCAGACAAGGAATTCCGCTGCAGCGACGGCAGCTGCATTGCTGAGCATTGGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp TCAGCCCACAGCAGTTGGGAACTGGTCTTGTCCACAGTCAGTCCATaGGGCCACCCTAGGTTGTTGTTGATGAGCACAGTACGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SAHSSWELVLSTVSP*GHPRLLLMSTVRSE
Trigger: CTCAGACCGTACTGTGCTCATCAACAACAACCTAGGGTGGCCCAATGGACTGACTGTGGACAAGACCAGTTCCCAACTGCTGTGGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp TTTTTCCCTGCGGGCTGGCGCTGGGGGTGCAAGGTATaGATGTCCATAGGAAAGTGGAGCTTGTTGCGAATG +
Preference number: 6 (lower is better)
Translates to: FFPAGWRWGCKV*MSIGKWSLLRM
Trigger: CATTCGCAACAAGCTCCACTTTCCTATGGACATTCATACCTTGCACCCCCAGCGCCAGCCCGCAGGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp GCCAGTCAGTCCAGTAGATATAGGAGTCAAGCAGAGTaGGGCCATATGGGTGCTGGACTGGTGACACCAGTG +
Preference number: 6 (lower is better)
Translates to: ASQSSRYRSQAE*GHMGAGLVTPV
Trigger: CACTGGTGTCACCAGTCCAGCACCCATATGGCCTCACTCTGCTTGACTCCTATATCTACTGGACTGACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp AGGCCATATGGGTGCTGGACTGGTGACACCAGTGTATaGCGATTAGCGCCATTCAGGTCTGCCACCTCAATT +
Preference number: 6 (lower is better)
Translates to: RPYGCWTGDTSV*RLAPFRSATSI
Trigger: AATTGAGGTGGCAGACCTGAATGGCGCTAATCGGCATACACTGGTGTCACCAGTCCAGCACCCATATGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp TCCAATAAATGGTTCCCTCCATGGGGTGTAGGGCAATaGCTCTGGGCTTCTCTAGGCTCTGCCATAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SNKWFPPWGVGQ*LWASLGSAIAA
Trigger: TGCTGCTATGGCAGAGCCTAGAGAAGCCCAGAGCCATTGCCCTACACCCCATGGAGGGAACCATTTATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp TTGTTGAGCCCAGGAACAGGAACGTGCACGTCTGTGTaGTCATCGGTGTCCAGTGAGATACGGCGAATAGAG +
Preference number: 6 (lower is better)
Translates to: LLSPGTGTCTSV*SSVSSEIRRIE
Trigger: CTCTATTCGCCGTATCTCACTGGACACCGATGACCACACAGACGTGCACGTTCCTGTTCCTGGGCTCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp GCCCGGGGCTCGTCTAGACTGTTGTTGATTAGCACTTaGCGACAGGATCCATCTAGCCGAGATGCTTCGATG +
Preference number: 6 (lower is better)
Translates to: ARGSSRLLLIST*RQDPSSRDASM
Trigger: CATCGAAGCATCTCGGCTAGATGGATCCTGTCGCAAAGTGCTAATCAACAACAGTCTAGACGAGCCCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TGTCTCCTTGTTGCGGCCCGAGTACTTGTCGACACGTaGGATCGATTTGGTCTGCCAGTCCGTCCAGTAGAT +
Preference number: 6 (lower is better)
Translates to: CLLVAARVLVDT*DRFGLPVRPVD
Trigger: ATCTACTGGACGGACTGGCAGACCAAATCGATCCAACGTGTCGACAAGTACTCGGGCCGCAACAAGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp ATAAGTCCCTCCACGTTGGCCAGTACTGTCTCCTTGTaGCGGCCCGAGTACTTGTCGACACGTTGGATCGAT +
Preference number: 6 (lower is better)
Translates to: ISPSTLASTVSL*RPEYLSTRWID
Trigger: ATCGATCCAACGTGTCGACAAGTACTCGGGCCGCAACAAGGAGACAGTACTGGCCAACGTGGAGGGACTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp GGGGACACCACAATAATATCCATAAGTCCCTCCACGTaGGCCAGTACTGTCTCCTTGTTGCGGCCCGAGTAC +
Preference number: 6 (lower is better)
Translates to: GDTTIISISPST*ASTVSLLRPEY
Trigger: GTACTCGGGCCGCAACAAGGAGACAGTACTGGCCAACGTGGAGGGACTTATGGATATTATTGTGGTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp AATAGCCAATCCATTAGGCCAGGTCAGGTTCGAAGAGATGATGACTaGTCGGCTGGAGGCGTCCATGCCAGCCCGTTCAATCTTGGGACT +
Preference number: 6 (lower is better)
Translates to: NSQSIRPGQVRRDDD*SAGGVHASPFNLGT
Trigger: AGTCCCAAGATTGAACGGGCTGGCATGGACGCCTCCAGCCGACAAGTCATCATCTCTTCGAACCTGACCTGGCCTAATGGATTGGCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp AAACAGCAATGGCCCGGGGCTCGTCTAGACTGTTGTTaGTTAGCACTTTGCGACAGGATCCATCTAGCCGAG +
Preference number: 6 (lower is better)
Translates to: KQQWPGARLDCC*LALCDRIHLAE
Trigger: CTCGGCTAGATGGATCCTGTCGCAAAGTGCTAATCAACAACAGTCTAGACGAGCCCCGGGCCATTGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp ATCTGTCCAGTAGAGCTTGTTGGTGACCCAATCAATTaGCAGGCCAGCAGGGCTCTCCAAACTGGTATCCAC +
Preference number: 6 (lower is better)
Translates to: ICPVELVGDPIN*QASRALQTGIH
Trigger: GTGGATACCAGTTTGGAGAGCCCTGCTGGCCTGGCAATTGATTGGGTCACCAACAAGCTCTACTGGACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp AGGGAGATGACATTGTTGAGCCCAGGAACAGGAACGTaGACGTCTGTGTGGTCATCGGTGTCCAGTGAGATA +
Preference number: 6 (lower is better)
Translates to: REMTLLSPGTGT*TSVWSSVSSEI
Trigger: TATCTCACTGGACACCGATGACCACACAGACGTGCACGTTCCTGTTCCTGGGCTCAACAATGTCATCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp CCCATTGAGGTCAGCACTCTCGATCCGATCCAGATGTaGATCTACCCAGTAGATCCTGCGGGTATCATAGTC +
Preference number: 6 (lower is better)
Translates to: PIEVSTLDPIQM*IYPVDPAGIIV
Trigger: GACTATGATACCCGCAGGATCTACTGGGTAGATGCACATCTGGATCGGATCGAGAGTGCTGACCTCAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp TGTCCATATAGAGTCAGCCCAAAAGGGTGGGGGAGCTaGCTTCCAATTAGTACCTTCCTCTTGCTGCCATCC +
Preference number: 6 (lower is better)
Translates to: CPYRVSPKGWGS*LPISTFLLLPS
Trigger: GGATGGCAGCAAGAGGAAGGTACTAATTGGAAGCCAGCTCCCCCACCCTTTTGGGCTGACTCTATATGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp CTCAATTCTCTCAGTATGGGCATCAGCCCACAGCAGTaGGGAACTGGTCTTGTCCACAGTCAGTCCATTGGG +
Preference number: 6 (lower is better)
Translates to: LNSLSMGISPQQ*GTGLVHSQSIG
Trigger: CCCAATGGACTGACTGTGGACAAGACCAGTTCCCAACTGCTGTGGGCTGATGCCCATACTGAGAGAATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp AGCCCGTCAGTGGTCTTAAGCCCGTGTCCAATAACAGTCTCCATGTaGCTGCCATTCAGGTCTGCTCGCCTGATAACATCCAGGAACACA +
Preference number: 6 (lower is better)
Translates to: SPSVVLSPCPITVSM*LPFRSARLITSRNT
Trigger: TGTGTTCCTGGATGTTATCAGGCGAGCAGACCTGAATGGCAGCAACATGGAGACTGTTATTGGACACGGGCTTAAGACCACTGACGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp ATAATATCCATAAGTCCCTCCACGTTGGCCAGTACTGTCTCCTTGTaGCGGCCCGAGTACTTGTCGACACGTTGGATCGATTTGGTCTGC +
Preference number: 6 (lower is better)
Translates to: IISISPSTLASTVSL*RPEYLSTRWIDLVC
Trigger: GCAGACCAAATCGATCCAACGTGTCGACAAGTACTCGGGCCGCAACAAGGAGACAGTACTGGCCAACGTGGAGGGACTTATGGATATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp AGGAGACCATGCGAACATCAATCCTCCTGGCGAAGATaGGGAAACTGTTCATGCCTGGTGAGCATGTCTTGC +
Preference number: 6 (lower is better)
Translates to: RRPCEHQSSWRR*GNCSCLVSMSC
Trigger: GCAAGACATGCTCACCAGGCATGAACAGTTTCCTCATCTTCGCCAGGAGGATTGATGTTCGCATGGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp CTTTGCGACAGGATCCATCTAGCCGAGATGCTTCGATaGTATTTCGGCCGGTATCTGTCCAGTACAGGTTTC +
Preference number: 6 (lower is better)
Translates to: LCDRIHLAEMLR*YFGRYLSSTGF
Trigger: GAAACCTGTACTGGACAGATACCGGCCGAAATACCATCGAAGCATCTCGGCTAGATGGATCCTGTCGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp GTGGTCTTAAGCCCGTGTCCAATAACAGTCTCCATGTaGCTGCCATTCAGGTCTGCTCGCCTGATAACATCC +
Preference number: 6 (lower is better)
Translates to: VVLSPCPITVSM*LPFRSARLITS
Trigger: GGATGTTATCAGGCGAGCAGACCTGAATGGCAGCAACATGGAGACTGTTATTGGACACGGGCTTAAGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TTGGTGGTAGAAGAATGTAAGGTGGTGGGCAGCGTGTaGGGTAGCACTGGGCTCTTCTCATTCATGCTGGTA +
Preference number: 6 (lower is better)
Translates to: LVVEECKVVGSV*GSTGLFSFMLV
Trigger: TACCAGCATGAATGAGAAGAGCCCAGTGCTACCCAACACGCTGCCCACCACCTTACATTCTTCTACCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp GCACAGGAGAAACCAGAAGGCCGAGGTAAACAGAGGTaGGAACAGCCGCCATTTCTTGAGCCACATTTATTA +
Preference number: 6 (lower is better)
Translates to: AQEKPEGRGKQR*EQPPFLEPHLL
Trigger: TAATAAATGTGGCTCAAGAAATGGCGGCTGTTCCCACCTCTGTTTACCTCGGCCTTCTGGTTTCTCCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS GCA 72 bp ATAGCACAGCTGATTATACACGGCTGGCTTGGGAGCTaGTTCAAGTTTCACTTCCTGAGTGGAAGTTCGGTA +
Preference number: 6 (lower is better)
Translates to: IAQLIIHGWLGS*FKFHFLSGSSV
Trigger: TACCGAACTTCCACTCAGGAAGTGAAACTTGAAGCAGCTCCCAAGCCAGCCGTGTATAATCAGCTGTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TTGCGAATGATTTCCTGGTTCTTCCCCGTAAACTTGTaGGCACTATTGATGCTCTTGGTGTGCCAGTCTGTC +
Preference number: 6 (lower is better)
Translates to: LRMISWFFPVNL*ALLMLLVCQSV
Trigger: GACAGACTGGCACACCAAGAGCATCAATAGTGCCAACAAGTTTACGGGGAAGAACCAGGAAATCATTCGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 90 bp ATTTCCTGGTTCTTCCCCGTAAACTTGTTGGCACTATTGATGCTCTaGGTGTGCCAGTCTGTCCAATACAAGCTGTCTTCAAACACTGTG +
Preference number: 6 (lower is better)
Translates to: ISWFFPVNLLALLML*VCQSVQYKLSSNTV
Trigger: CACAGTGTTTGAAGACAGCTTGTATTGGACAGACTGGCACACCAAGAGCATCAATAGTGCCAACAAGTTTACGGGGAAGAACCAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS TCA 72 bp CCACTCCAATGGCGATGGTGTTCTTCATGGTCATGTTaGTGGGTACCACCACATCAGCAAAATAAGGGATAT +
Preference number: 6 (lower is better)
Translates to: PLQWRWCSSWSC*WVPPHQQNKGY
Trigger: ATATCCCTTATTTTGCTGATGTGGTGGTACCCATCAACATGACCATGAAGAACACCATCGCCATTGGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TTCTTCCCCGTAAACTTGTTGGCACTATTGATGCTCTaGGTGTGCCAGTCTGTCCAATACAAGCTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: FFPVNLLALLML*VCQSVQYKLSS
Trigger: TGAAGACAGCTTGTATTGGACAGACTGGCACACCAAGAGCATCAATAGTGCCAACAAGTTTACGGGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CAA 72 bp TTGTTGCGAATGATTTCCTGGTTCTTCCCCGTAAACTaGTTGGCACTATTGATGCTCTTGGTGTGCCAGTCT +
Preference number: 6 (lower is better)
Translates to: LLRMISWFFPVN*LALLMLLVCQS
Trigger: AGACTGGCACACCAAGAGCATCAATAGTGCCAACAAGTTTACGGGGAAGAACCAGGAAATCATTCGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4
CDS CCA 72 bp TCCATAGGAAAGTGGAGCTTGTTGCGAATGATTTCCTaGTTCTTCCCCGTAAACTTGTTGGCACTATTGATG +
Preference number: 6 (lower is better)
Translates to: SIGKWSLLRMIS*FFPVNLLALLM
Trigger: CATCAATAGTGCCAACAAGTTTACGGGGAAGAACCAGGAAATCATTCGCAACAAGCTCCACTTTCCTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028689.4