Pregenerated sensors for LRP2BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031637Ensembl transcript IDs: ENSMUST00000066451.10, ENSMUST00000110380.8, ENSMUST00000110381.9, ENSMUST00000132341.2, ENSMUST00000145597.8
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAAGGAAAGGGGCAGTGATGTCTTAGGCATCACGGTGGGCGTGTaGCTCAAGGGAAGGTGGGCAGTGAGGGAGGGGCTACTGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: RKERGSDVLGITVGV*LKGRWAVREGLLVV Trigger: CACCACCAGTAGCCCCTCCCTCACTGCCCACCTTCCCTTGAGCCACACGCCCACCGTGATGCCTAAGACATCACTGCCCCTTTCCTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR GCA 90 bp | AGTGCACCCTGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATaGCAGAAAAATGCCGGCTGGAGTTCACAGGTGCTGGCTGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SAPWDSRLPLPQASE*QKNAGWSSQVLAAK Trigger: CTTGGCAGCCAGCACCTGTGAACTCCAGCCGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR TCA 90 bp | GGGCGGCATCAGTGTCTTGGCGGATTCCCTGTCCGTAAAAGTACATaGGACCAAGTGCACCCTGGGACTCCAGACTTCCGTTGCCACAAG | + |
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Preference number: 1 (lower is better) Translates to: GRHQCLGGFPVRKST*DQVHPGTPDFRCHK Trigger: CTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCTCATGTACTTTTACGGACAGGGAATCCGCCAAGACACTGATGCCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR CCA 90 bp | CCCGTGGTAGAAAGCCGCCATGGCCATGCCTTTGATGATAAACTCTaGGAGACAGTCCGTGACGTGGGCTATCATGGGGATGTCGTGGAC | + |
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Preference number: 1 (lower is better) Translates to: PVVESRHGHAFDDKL*ETVRDVGYHGDVVD Trigger: GTCCACGACATCCCCATGATAGCCCACGTCACGGACTGTCTCCCAGAGTTTATCATCAAAGGCATGGCCATGGCGGCTTTCTACCACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132341.2 ENSMUST00000145597.8 |
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| 3UTR GCA 90 bp | GGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATGCCAGAAAAATaGCGGCTGGAGTTCACAGGTGCTGGCTGCCAAGATCAAAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: GLQTSVATSFRMPEK*RLEFTGAGCQDQKG Trigger: GCCTTTTTGATCTTGGCAGCCAGCACCTGTGAACTCCAGCCGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR GCA 90 bp | AGTGTCTTGGCGGATTCCCTGTCCGTAAAAGTACATGAGACCAAGTaGACCCTGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATG | + |
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Preference number: 1 (lower is better) Translates to: SVLADSLSVKVHETK*TLGLQTSVATSFRM Trigger: CATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCTCATGTACTTTTACGGACAGGGAATCCGCCAAGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR CCA 90 bp | TGTGGCTCAAGGGAGGGTGGTGAGGGAGAAGATGAGACCAGAGTATaGGAACACACATATGAGGATGTCATGAGGAAATCCATTTCTATG | + |
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Preference number: 1 (lower is better) Translates to: CGSREGGEGEDETRV*EHTYEDVMRKSISM Trigger: CATAGAAATGGATTTCCTCATGACATCCTCATATGTGTGTTCCCATACTCTGGTCTCATCTTCTCCCTCACCACCCTCCCTTGAGCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR TCA 90 bp | CATCGTTTGTGTTTGTATTTTCTCATTTCGATGGTCCCGGATACCTaGCATGTCAGTTCTCTCCTTTCTCGTGAGGGTTCTGAGAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: HRLCLYFLISMVPDT*HVSSLLSREGSERQ Trigger: TTGCCTCTCAGAACCCTCACGAGAAAGGAGAGAACTGACATGTCAGGTATCCGGGACCATCGAAATGAGAAAATACAAACACAAACGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR CCA 90 bp | CAACTTAGGCTGAACATCGTTTGTGTTTGTATTTTCTCATTTCGATaGTCCCGGATACCTGACATGTCAGTTCTCTCCTTTCTCGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: QLRLNIVCVCIFSFR*SRIPDMSVLSFLVR Trigger: CCTCACGAGAAAGGAGAGAACTGACATGTCAGGTATCCGGGACCATCGAAATGAGAAAATACAAACACAAACGATGTTCAGCCTAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR GCA 90 bp | CCCAGATTTATCCAACCAAGTAGATGGGCAAAAATAACTACACTTTaGCTAGCTATATCACTCCTGGGTGTGTGCCTAAAGGATTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: PRFIQPSRWAKITTL*LAISLLGVCLKDSS Trigger: AGAAGAATCCTTTAGGCACACACCCAGGAGTGATATAGCTAGGCAAAGTGTAGTTATTTTTGCCCATCTACTTGGTTGGATAAATCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR TCA 90 bp | GAGAAGATGAGACCAGAGTATGGGAACACACATATGAGGATGTCATaGGGAAATCCATTTCTATGTGTTCTAACCTACACATTGTTTATG | + |
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Preference number: 1 (lower is better) Translates to: EKMRPEYGNTHMRMS*GNPFLCVLTYTLFM Trigger: CATAAACAATGTGTAGGTTAGAACACATAGAAATGGATTTCCTCATGACATCCTCATATGTGTGTTCCCATACTCTGGTCTCATCTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGCAGATTCTTCGTCTTTCATGATGCCTAAGCCCAGCTGGAGACAGCGCCCGCTGGGAGACAGTCCGTaGCGTGGGCTATCATGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LADSSSFMMPKPSWRQRPLGDSP*RGLSWG Trigger: TCCCCATGATAGCCCACGTCACGGACTGTCTCCCAG...CGGGCGCTGTCTCCAGCTGGGCTTAGGCATCATGAAAGACGAAGAATCTGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132341.2 ENSMUST00000145597.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGTCCCCTGGGCATAGACATTCCCTCGCTCAGCTGCTTCCCGTAAGCAGTAGACAGTCCGTGACGTaGGCTATCATGGGGATGTCG | + |
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Preference number: 2 (lower is better) Translates to: QESPGHRHSLAQLLPVSSRQSVT*AIMGMS Trigger: CGACATCCCCATGATAGCCCACGTCACGGACTGTCT...ACTGCTTACGGGAAGCAGCTGAGCGAGGGAATGTCTATGCCCAGGGGACTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132341.2 ENSMUST00000145597.8 |
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| 3UTR-3UTR CCA 90 bp | GATGATAAACTCTGGGAGACAGTCCGTGACGTGGGCTATCATGGGGATGTCGTGAGACAGTCCGTGACGTaGGCTATCATGGGGATGTCG | + |
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Preference number: 2 (lower is better) Translates to: DDKLWETVRDVGYHGDVVRQSVT*AIMGMS Trigger: CGACATCCCCATGATAGCCCACGTCACGGACTGTCT...CACGACATCCCCATGATAGCCCACGTCACGGACTGTCTCCCAGAGTTTATCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132341.2 ENSMUST00000145597.8 |
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| 3UTR-3UTR CCA 90 bp | CCATATTTATCTCTGCACTCTTCACAGCTAGGAAGTGCAACCAGCTTCCATTTAGGCTACTGGTGGTGGTaGGATCTGAGGGAGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: PYLSLHSSQLGSATSFHLGYWWW*DLREGG Trigger: CCCTCCCTCCCTCAGATCCCACCACCACCAGTAGCC...TAAATGGAAGCTGGTTGCACTTCCTAGCTGTGAAGAGTGCAGAGATAAATATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTATGGGAACACACATATGAGGATGTCATGAGGAAATCCATTTCTATGTGTAGGGAAGGTGGGCAGTaGGGGAGGGGCTACTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RVWEHTYEDVMRKSISMCREGGQ*GRGYWW Trigger: CCACCAGTAGCCCCTCCCTCACTGCCCACCTTCCCT...ACACATAGAAATGGATTTCCTCATGACATCCTCATATGTGTGTTCCCATACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR TCA 90 bp | GTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGATGGTCCCGGATACCTaGCATGTCAGTTCTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: VFALGMFSNPVQPRPLYRMVPDT*HVSSLL Trigger: AAGGAGAGAACTGACATGTCAGGTATCCGGGACCAT...CCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTATGGGAACACACATATGAGGATGTCATGAGGAAATCCATTTCTATGTGTGGGAGGGGCTGTCTGTaGGGGTGTGGCTCAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RVWEHTYEDVMRKSISMCGRGCL*GCGSRE Trigger: CTCCCTTGAGCCACACCCCCACAGACAGCCCCTCCC...ACACATAGAAATGGATTTCCTCATGACATCCTCATATGTGTGTTCCCATACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCACCCTGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATGCCAGAAAGTCTGCTATCCTTTTaGAAAACGAAACACACTTGG | + |
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Preference number: 2 (lower is better) Translates to: KCTLGLQTSVATSFRMPESLLSF*KTKHTW Trigger: CCAAGTGTGTTTCGTTTTCCAAAAGGATAGCAGACT...TTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCTGGGAGACAGTCCGTaGCGTGGGCTATCATGGGGA | + |
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Preference number: 2 (lower is better) Translates to: VTDTAFNKAERYLLLACFLGDSP*RGLSWG Trigger: TCCCCATGATAGCCCACGTCACGGACTGTCTCCCAG...AAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
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| 3UTR CAA 90 bp | GTAGTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTaGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGC | + |
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Preference number: 2 (lower is better) Translates to: VVTDTAFNKAERYLL*ACFQTQFSPGHSTG Trigger: GCCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTGGTGAGGGAGAAGATGAGACCAGAGTATGGGAACACACATATGAGGATAGTCTGCTATCCTTTTaGAAAACGAAACACACTTGG | + |
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Preference number: 2 (lower is better) Translates to: EGGEGEDETRVWEHTYEDSLLSF*KTKHTW Trigger: CCAAGTGTGTTTCGTTTTCCAAAAGGATAGCAGACT...ATCCTCATATGTGTGTTCCCATACTCTGGTCTCATCTTCTCCCTCACCACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGTGGTGAGGGAGAAGATGAGACCAGAGTATGGGAACACACATATGAGGATAAATTCTCTGGTGAATaGGTAAGGAGTGAAGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: EGGEGEDETRVWEHTYEDKFSGE*VRSEVH Trigger: ATGAACTTCACTCCTTACTCATTCACCAGAGAATTT...ATCCTCATATGTGTGTTCCCATACTCTGGTCTCATCTTCTCCCTCACCACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCGGATACAGATGTAGCTaGTGTAAACATACACACATT | + |
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Preference number: 2 (lower is better) Translates to: YLLLACFQTQFSPGHSTGGYRCS*CKHTHI Trigger: AATGTGTGTATGTTTACAGCAGCTACATCTGTATCC...GCCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 ENSMUST00000145597.8 |
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| 3UTR-3UTR GCA 90 bp | CAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAACCACAAGCTTCCGAATaGCAGAAAAATGCCGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QTLHLIRQRGICSWHVFKPQASE*QKNAGW Trigger: CCAGCCGGCATTTTTCTGGCATTCGGAAGCTTGTGG...TTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCATGCCTTTGATGATAAACTCTGGGAGACAGTCCGTGACGTGGGCTATCATATTACGTTTTTAAGTTaGCAGCACATGTACTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GHAFDDKLWETVRDVGYHITFLS*QHMYFG Trigger: TCCAAAGTACATGTGCTGCCAACTTAAAAACGTAAT...ATGATAGCCCACGTCACGGACTGTCTCCCAGAGTTTATCATCAAAGGCATGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGATCATAAGAGGAGGGAATCTCAAGGGAAGTGGGGAAGAATAGAAGGCGAAGGATACAGATGTAGCTaGTGTAAACATACACACATT | + |
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Preference number: 2 (lower is better) Translates to: EDHKRRESQGKWGRIEGEGYRCS*CKHTHI Trigger: AATGTGTGTATGTTTACAGCAGCTACATCTGTATCC...TTCGCCTTCTATTCTTCCCCACTTCCCTTGAGATTCCCTCCTCTTATGATCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR CCA 90 bp | CCATATTTATCTCTGCACTCTTCACAGCTAGGAAGTGCAACCAGCTTCCATTTAGAATCTCAAGGGAAGTaGGGAAGAATAGAAGGCGAA | + |
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Preference number: 2 (lower is better) Translates to: PYLSLHSSQLGSATSFHLESQGK*GRIEGE Trigger: TTCGCCTTCTATTCTTCCCCACTTCCCTTGAGATTC...TAAATGGAAGCTGGTTGCACTTCCTAGCTGTGAAGAGTGCAGAGATAAATATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAATTCACAGGTGCTGGCTaGCAAGATCAAAAAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: TDTAFNKAERYLLLACFQFTGAG*QDQKGN Trigger: GTTGCCTTTTTGATCTTGGCAGCCAGCACCTGTGAA...TTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR-3UTR CCA 90 bp | CCATATTTATCTCTGCACTCTTCACAGCTAGGAAGTGCAACCAGCTTCCATTTACTGTTTTCCCTGACATaGAACCAAGATTTGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: PYLSLHSSQLGSATSFHLLFSLT*NQDLKM Trigger: CATTTTCAAATCTTGGTTCCATGTCAGGGAAAACAG...TAAATGGAAGCTGGTTGCACTTCCTAGCTGTGAAGAGTGCAGAGATAAATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGTTCATTAAATTAAGATCTTTGAGGGCACATTTGGAGGGACATGATACTATGGGAACACACATATaGGGATGTCATGAGGAAATC | + |
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Preference number: 2 (lower is better) Translates to: VLFIKLRSLRAHLEGHDTMGTHI*GCHEEI Trigger: GATTTCCTCATGACATCCTCATATGTGTGTTCCCAT...AGTATCATGTCCCTCCAAATGTGCCCTCAAAGATCTTAATTTAATGAACAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAGGATACAGATGTAGCTaGTGTAAACATACACACATT | + |
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Preference number: 2 (lower is better) Translates to: TDTAFNKAERYLLLACFQGYRCS*CKHTHI Trigger: AATGTGTGTATGTTTACAGCAGCTACATCTGTATCC...TTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 ENSMUST00000145597.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAAAAACAGCATGCTTTCAGGAAAATGGATGGGACTGGAAGGCATCATGTTAATCCAACCAAGTAGATaGGCAAAAATAACTACACTT | + |
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Preference number: 2 (lower is better) Translates to: MKNSMLSGKWMGLEGIMLIQPSR*AKITTL Trigger: AAGTGTAGTTATTTTTGCCCATCTACTTGGTTGGAT...TAACATGATGCCTTCCAGTCCCATCCATTTTCCTGAAAGCATGCTGTTTTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGTTCATTAAATTAAGATCTTTGAGGGCACATTTGGAGGGACATGATACTATTACGTTTTTAAGTTaGCAGCACATGTACTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLFIKLRSLRAHLEGHDTITFLS*QHMYFG Trigger: TCCAAAGTACATGTGCTGCCAACTTAAAAACGTAAT...AGTATCATGTCCCTCCAAATGTGCCCTCAAAGATCTTAATTTAATGAACAAAAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR CCA 72 bp | AGGGGCAGTGATGTCTTAGGCATCACGGTGGGCGTGTaGCTCAAGGGAAGGTGGGCAGTGAGGGAGGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: RGSDVLGITVGV*LKGRWAVREGL Trigger: TAGCCCCTCCCTCACTGCCCACCTTCCCTTGAGCCACACGCCCACCGTGATGCCTAAGACATCACTGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR GCA 72 bp | TGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATaGCAGAAAAATGCCGGCTGGAGTTCACAGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: WDSRLPLPQASE*QKNAGWSSQVL Trigger: CAGCACCTGTGAACTCCAGCCGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR TCA 72 bp | CAGTGTCTTGGCGGATTCCCTGTCCGTAAAAGTACATaGGACCAAGTGCACCCTGGGACTCCAGACTTCCGT | + |
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Preference number: 3 (lower is better) Translates to: QCLGGFPVRKST*DQVHPGTPDFR Trigger: ACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCTCATGTACTTTTACGGACAGGGAATCCGCCAAGACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR CCA 72 bp | TTGCCACAAGCTTCCGAATGCCAGAAAAATGCCGGCTaGAGTTCACAGGTGCTGGCTGCCAAGATCAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: LPQASECQKNAG*SSQVLAAKIKK Trigger: CTTTTTGATCTTGGCAGCCAGCACCTGTGAACTCCAGCCGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGCAGATTCTTCGTCTTTCATGATGCCTAAGCCCAGCTGGAGACAGCGCCCGGGCAGCACATGTACTTaGGAAATGACAAAACTCAAT | + |
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Preference number: 3 (lower is better) Translates to: LADSSSFMMPKPSWRQRPGSTCT*EMTKLN Trigger: ATTGAGTTTTGTCATTTCCAAAGTACATGTGCTGCC...CGGGCGCTGTCTCCAGCTGGGCTTAGGCATCATGAAAGACGAAGAATCTGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGCAGATTCTTCGTCTTTCATGATGCCTAAGCCCAGCTGGAGACAGCGCCCGTGTAGTTTAAGTTCTTaGACAGAATGCACTGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: LADSSSFMMPKPSWRQRPCSLSS*TECTVV Trigger: GACCACAGTGCATTCTGTCAAAGAACTTAAACTACA...CGGGCGCTGTCTCCAGCTGGGCTTAGGCATCATGAAAGACGAAGAATCTGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132341.2 ENSMUST00000145597.8 |
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| 3UTR-3UTR CAA 90 bp | TATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCGAGAGGTATTTGCTCTaGGCATGTTTTCAAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: YLLLACFQTQFSPGHSTGERYLL*ACFQTQ Trigger: CTGGGTTTGAAAACATGCCAAGAGCAAATACCTCTC...GCCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 ENSMUST00000145597.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGGTGGTGAGGGAGAAGATGAGACCAGAGTATGGGAACACACATATGAGGATAAGGCAGAGAGGTATTaGCTCTTGGCATGTTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: EGGEGEDETRVWEHTYEDKAERY*LLACFQ Trigger: TTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTT...ATCCTCATATGTGTGTTCCCATACTCTGGTCTCATCTTCTCCCTCACCACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR TCA 72 bp | CAAGGGAAGTGGGGAAGAATAGAAGGCGAAATTAGCTaGAGAAAGGAAAGGGGCAGTGATGTCTTAGGCATC | + |
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Preference number: 3 (lower is better) Translates to: QGKWGRIEGEIS*RKERGSDVLGI Trigger: GATGCCTAAGACATCACTGCCCCTTTCCTTTCTTCAGCTAATTTCGCCTTCTATTCTTCCCCACTTCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR GCA 72 bp | ACTACACTTTGCCTAGCTATATCACTCCTGGGTGTGTaGCTAAAGGATTCTTCTGGACAACACACCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: TTLCLAISLLGV*LKDSSGQHTTE Trigger: CTCTGTGGTGTGTTGTCCAGAAGAATCCTTTAGGCACACACCCAGGAGTGATATAGCTAGGCAAAGTGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
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| 3UTR-3UTR CAA 90 bp | ACTACACTTTGCCTAGCTATATCACTCCTGGGTGTGTGCCTAAAGGATTCTTCTGAGAGGTATTTGCTCTaGGCATGTTTTCAAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TTLCLAISLLGVCLKDSSERYLL*ACFQTQ Trigger: CTGGGTTTGAAAACATGCCAAGAGCAAATACCTCTC...AGAAGAATCCTTTAGGCACACACCCAGGAGTGATATAGCTAGGCAAAGTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| 3UTR TCA 72 bp | TGTTTGTATTTTCTCATTTCGATGGTCCCGGATACCTaGCATGTCAGTTCTCTCCTTTCTCGTGAGGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLYFLISMVPDT*HVSSLLSREGS Trigger: AGAACCCTCACGAGAAAGGAGAGAACTGACATGTCAGGTATCCGGGACCATCGAAATGAGAAAATACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| 3UTR GCA 72 bp | TTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTaGTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LQTLHLIRQRGI*SWHVFKPSSAQ Trigger: CTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 ENSMUST00000145597.8 |
||
| 3UTR GCA 72 bp | ATCCAACCAAGTAGATGGGCAAAAATAACTACACTTTaGCTAGCTATATCACTCCTGGGTGTGTGCCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IQPSRWAKITTL*LAISLLGVCLK Trigger: CTTTAGGCACACACCCAGGAGTGATATAGCTAGGCAAAGTGTAGTTATTTTTGCCCATCTACTTGGTTGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| 3UTR TCA 72 bp | TGGAGAAAGAAAATTCGAAACCAAGGCAGTGGACTCTaGTGCATCCATAATGAAAAACAGCATGCTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WRKKIRNQGSGL*CIHNEKQHAFR Trigger: CCTGAAAGCATGCTGTTTTTCATTATGGATGCATCAGAGTCCACTGCCTTGGTTTCGAATTTTCTTTCTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| 3UTR CCA 72 bp | TATATCACTCCTGGGTGTGTGCCTAAAGGATTCTTCTaGACAACACACCACAGAGATAAGCATCCATATTTA | + |
|
Preference number: 3 (lower is better) Translates to: YITPGCVPKGFF*TTHHRDKHPYL Trigger: TAAATATGGATGCTTATCTCTGTGGTGTGTTGTCCAGAAGAATCCTTTAGGCACACACCCAGGAGTGATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| 3UTR CCA 72 bp | CTGAACATCGTTTGTGTTTGTATTTTCTCATTTCGATaGTCCCGGATACCTGACATGTCAGTTCTCTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNIVCVCIFSFR*SRIPDMSVLSF Trigger: AAAGGAGAGAACTGACATGTCAGGTATCCGGGACCATCGAAATGAGAAAATACAAACACAAACGATGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATATTTATCTCTGCACTCTTCACAGCTAGGAAGTGCAACCAGCTTCCATTTAGGCAGCACATGTACTTaGGAAATGACAAAACTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PYLSLHSSQLGSATSFHLGSTCT*EMTKLN Trigger: ATTGAGTTTTGTCATTTCCAAAGTACATGTGCTGCC...TAAATGGAAGCTGGTTGCACTTCCTAGCTGTGAAGAGTGCAGAGATAAATATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| 3UTR TCA 72 bp | AGACCAGAGTATGGGAACACACATATGAGGATGTCATaGGGAAATCCATTTCTATGTGTTCTAACCTACACA | + |
|
Preference number: 3 (lower is better) Translates to: RPEYGNTHMRMS*GNPFLCVLTYT Trigger: TGTGTAGGTTAGAACACATAGAAATGGATTTCCTCATGACATCCTCATATGTGTGTTCCCATACTCTGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| 3UTR CAA 72 bp | ATGAGACCAAGTGCACCCTGGGACTCCAGACTTCCGTaGCCACAAGCTTCCGAATGCCAGAAAAATGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MRPSAPWDSRLP*PQASECQKNAG Trigger: GCCGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR TCA 90 bp | GTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCTGGGAGACAGTCCGTaGCGTGGGCTATCATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFALGMFSNPVQPRPLYRLGDSP*RGLSWG Trigger: TCCCCATGATAGCCCACGTCACGGACTGTCTCCCAG...CCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAGTCCCCTGGGCATAGACATTCCCTCGCTCAGCTGCTTCCCGTAAGCAGTCGAATGCCAGAAAAATaGCTAGGAAGTGAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QESPGHRHSLAQLLPVSSRMPEK*LGSEGR Trigger: CCTTCCCTCACTTCCTAGGCATTTTTCTGGCATTCG...ACTGCTTACGGGAAGCAGCTGAGCGAGGGAATGTCTATGCCCAGGGGACTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCACCCTGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATGCCAGAAAGCAGCGAATTTCAAGTaGATTGTCTGGGGGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAPWDSRLPLPQASECQKAANFK*IVWGHE Trigger: TTCATGCCCCCAGACAATGCACTTGAAATTCGCTGC...TTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCAGACCAAGTGCACCCTaGGACTCCAGACTTCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLLACFQTQFSPGHSTGRPSAP*DSRLPL Trigger: CAACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCT...GCCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGTGAGGGAGAAGATGAGACCAGAGTATGGGAACACACATATGAGGATAGACCAAGTGCACCCTaGGACTCCAGACTTCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGEGEDETRVWEHTYEDRPSAP*DSRLPL Trigger: CAACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCT...ATCCTCATATGTGTGTTCCCATACTCTGGTCTCATCTTCTCCCTCACCACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCACCCTGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATGCCAGAAGATTTCCTCAAACTGTaGCAAGGCTTCTTCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: KCTLGLQTSVATSFRMPEDFLKL*QGFFIP Trigger: TGGTATGAAGAAGCCTTGGCACAGTTTGAGGAAATC...TTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAAAACAGCATGCTTTCAGGAAAATGGATGGGACTGGAAGGCATCATGTTAGGGAAGGCCTGCACCTaGCAGGAGACGCACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MKNSMLSGKWMGLEGIMLGKACT*QETHSQ Trigger: CTGTGAGTGCGTCTCCTGGCAGGTGCAGGCCTTCCC...TAACATGATGCCTTCCAGTCCCATCCATTTTCCTGAAAGCATGCTGTTTTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
||
| CDS-3UTR CCA 90 bp | GGTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGTTCAAGTGCATTGTCTaGGGGCATGAAGAGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GICSWHVFKPSSAQATLQFKCIV*GHEESR Trigger: CCTCGACTCTTCATGCCCCCAGACAATGCACTTGAA...CTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR TCA 90 bp | GTAGTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTCTGGGAGACAGTCCGTaGCGTGGGCTATCATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVTDTAFNKAERYLLLACLGDSP*RGLSWG Trigger: TCCCCATGATAGCCCACGTCACGGACTGTCTCCCAG...ACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | TTTCGATGGTCCCGGATACCTGACATGTCAGTTCTCTCCTTTCTCGTGAGGGTTTCCTTTTTCAGCATTTaGAATGGTCCCCAGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FRWSRIPDMSVLSFLVRVSFFSI*NGPQPI Trigger: GATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGA...AACCCTCACGAGAAAGGAGAGAACTGACATGTCAGGTATCCGGGACCATCGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCGAGAGAAAGGGTTTTTaGGCAACTTCTCGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLLLACFQTQFSPGHSTGERKGF*ATSRCS Trigger: TGAGCAGCGAGAAGTTGCCCAAAAACCCTTTCTCTC...GCCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | GTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGGAGAGAAAGGGTTTTTaGGCAACTTCTCGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFALGMFSNPVQPRPLYRERKGF*ATSRCS Trigger: TGAGCAGCGAGAAGTTGCCCAAAAACCCTTTCTCTC...CCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | AGGTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACATTCAAGTGCATTGTCTaGGGGCATGAAGAGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYLLLACFQTQFSPGHSTFKCIV*GHEESR Trigger: CCTCGACTCTTCATGCCCCCAGACAATGCACTTGAA...TGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR TCA 90 bp | TTTCGATGGTCCCGGATACCTGACATGTCAGTTCTCTCCTTTCTCGTGAGGGTTTGTTTGGCAGCATACTaGGACAGAGAGAAAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRWSRIPDMSVLSFLVRVCLAAY*DREKGF Trigger: AAACCCTTTCTCTCTGTCTCAGTATGCTGCCAAACA...AACCCTCACGAGAAAGGAGAGAACTGACATGTCAGGTATCCGGGACCATCGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGGGGTCCGGCCAGTGTTaGCTCTCTGAACTCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVGSGQC*LSELPG Trigger: CCCCGGGAGTTCAGAGAGGCAACACTGGCCGGACCC...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066451.10 |
||
| CDS-3UTR TCA 90 bp | AGGTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACATGTTTGGCAGCATACTaGGACAGAGAGAAAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYLLLACFQTQFSPGHSTCLAAY*DREKGF Trigger: AAACCCTTTCTCTCTGTCTCAGTATGCTGCCAAACA...TGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAAAACAGCATGCTTTCAGGAAAATGGATGGGACTGGAAGGCATCATGTTAAAAATGCCTAGGAAGTaGGGGAAGGCCTGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MKNSMLSGKWMGLEGIMLKMPRK*GKACTC Trigger: GCAGGTGCAGGCCTTCCCTCACTTCCTAGGCATTTT...TAACATGATGCCTTCCAGTCCCATCCATTTTCCTGAAAGCATGCTGTTTTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATGCCTTTGATGATAAACTCTGGGAGACAGTCCGTGACGTGGGCTATCATTTTCAGGAACTGCAATaGTGTATCCACCAAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHAFDDKLWETVRDVGYHFQELQ*CIHQIS Trigger: GCTAATTTGGTGGATACAGCATTGCAGTTCCTGAAA...ATGATAGCCCACGTCACGGACTGTCTCCCAGAGTTTATCATCAAAGGCATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | ACTACACTTTGCCTAGCTATATCACTCCTGGGTGTGTGCCTAAAGGATTCTTCTAAGAGCTGGAGCCTGTaGGTGTCTTCCTGTTGCTNN | + |
|
Preference number: 4 (lower is better) Translates to: TTLCLAISLLGVCLKDSSKSWSL*VSSCCX Trigger: NNAGCAACAGGAAGACACGCACAGGCTCCAGCTCTT...AGAAGAATCCTTTAGGCACACACCCAGGAGTGATATAGCTAGGCAAAGTGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
||
| 3UTR CAA 72 bp | GACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTaGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DTAFNKAERYLL*ACFQTQFSPGH Trigger: GTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 ENSMUST00000145597.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGCTGGGAGACAGTCCGTaGCGTGGGCTATCATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVLGDSP*RGLSWG Trigger: TCCCCATGATAGCCCACGTCACGGACTGTCTCCCAG...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | TATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCTTTCAGGAACTGCAATaGTGTATCCACCAAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLLLACFQTQFSPGHSTGFQELQ*CIHQIS Trigger: GCTAATTTGGTGGATACAGCATTGCAGTTCCTGAAA...GCCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | AGGTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGATTTCCTCAAACTGTaGCAAGGCTTCTTCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: RYLLLACFQTQFSPGHSTDFLKL*QGFFIP Trigger: TGGTATGAAGAAGCCTTGGCACAGTTTGAGGAAATC...TGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTATGGGAACACACATATGAGGATGTCATGAGGAAATCCATTTCTATGTGTAGACCAAGTGCACCCTaGGACTCCAGACTTCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVWEHTYEDVMRKSISMCRPSAP*DSRLPL Trigger: CAACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCT...ACACATAGAAATGGATTTCCTCATGACATCCTCATATGTGTGTTCCCATACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| CDS-3UTR CCA 90 bp | CAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAAAGACAGTCCGTGACGTaGGCTATCATGGGGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QTLHLIRQRGICSWHVFKRQSVT*AIMGMS Trigger: CGACATCCCCATGATAGCCCACGTCACGGACTGTCT...TTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAAGACAGTCCGTGACGTaGGCTATCATGGGGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TDTAFNKAERYLLLACFQRQSVT*AIMGMS Trigger: CGACATCCCCATGATAGCCCACGTCACGGACTGTCT...TTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGGTGAGGGAGAAGATGAGACCAGAGTATGGGAACACACATATGAGGATAATCCTAGAATACTTTaGGCCTTCACACTAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGGEGEDETRVWEHTYEDNPRIL*AFTLAF Trigger: AAAAGCTAGTGTGAAGGCGCAAAGTATTCTAGGATT...ATCCTCATATGTGTGTTCCCATACTCTGGTCTCATCTTCTCCCTCACCACCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | AGGTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAAATCCTAGAATACTTTaGGCCTTCACACTAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYLLLACFQTQFSPGHSTNPRIL*AFTLAF Trigger: AAAAGCTAGTGTGAAGGCGCAAAGTATTCTAGGATT...TGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | GTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGTTTTCCTTCTTCCACTaGAAGAATTTCTGTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFALGMFSNPVQPRPLYRFSFFH*KNFCCL Trigger: CAAACAACAGAAATTCTTCCAGTGGAAGAAGGAAAA...CCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCTTTTCCTTCTTCCACTaGAAGAATTTCTGTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLLACFQTQFSPGHSTGFSFFH*KNFCCL Trigger: CAAACAACAGAAATTCTTCCAGTGGAAGAAGGAAAA...GCCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | CAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAATTCAAGTGCATTGTCTaGGGGCATGAAGAGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTLHLIRQRGICSWHVFKFKCIV*GHEESR Trigger: CCTCGACTCTTCATGCCCCCAGACAATGCACTTGAA...TTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | GTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCCTTTTCCAACTCTTTaGGCTCTTTCATTGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFALGMFSNPVQPRPLYRPFPTL*ALSLNK Trigger: TTTATTCAATGAAAGAGCCCAAAGAGTTGGAAAAGG...CCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGAGACCAAGTGCACCCTaGGACTCCAGACTTCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVRPSAP*DSRLPL Trigger: CAACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCT...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGAGACAGTCCGTGACGTaGGCTATCATGGGGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVRQSVT*AIMGMS Trigger: CGACATCCCCATGATAGCCCACGTCACGGACTGTCT...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| 3UTR CAA 72 bp | GTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTaGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTDTAFNKAERY*LLACFQTQFSP Trigger: TGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTGTTTGGCAGCATACTaGGACAGAGAGAAAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVTDTAFNKAERYLLLACCLAAY*DREKGF Trigger: AAACCCTTTCTCTCTGTCTCAGTATGCTGCCAAACA...ACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR TCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGGTCCGTAAAAGTACATaGGACCAAGTGCACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVVRKST*DQVHPG Trigger: CCCAGGGTGCACTTGGTCTCATGTACTTTTACGGAC...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000132341.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTATGGGAACACACATATGAGGATGTCATGAGGAAATCCATTTCTATGTGTTCCTTTTTCAGCATTTaGAATGGTCCCCAGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RVWEHTYEDVMRKSISMCSFFSI*NGPQPI Trigger: GATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGA...ACACATAGAAATGGATTTCCTCATGACATCCTCATATGTGTGTTCCCATACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAGCAGCGAATTTCAAGTaGATTGTCTGGGGGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDTAFNKAERYLLLACFQAANFK*IVWGHE Trigger: TTCATGCCCCCAGACAATGCACTTGAAATTCGCTGC...TTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | GTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTGAGAGAAAGGGTTTTTaGGCAACTTCTCGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTDTAFNKAERYLLLACFERKGF*ATSRCS Trigger: TGAGCAGCGAGAAGTTGCCCAAAAACCCTTTCTCTC...AAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR CCA 90 bp | AGGTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACACCTTTTCCAACTCTTTaGGCTCTTTCATTGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RYLLLACFQTQFSPGHSTPFPTL*ALSLNK Trigger: TTTATTCAATGAAAGAGCCCAAAGAGTTGGAAAAGG...TGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR TCA 90 bp | ACTACACTTTGCCTAGCTATATCACTCCTGGGTGTGTGCCTAAAGGATTCTTCTAAATTCTCTGGTGAATaGGTAAGGAGTGAAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTLCLAISLLGVCLKDSSKFSGE*VRSEVH Trigger: ATGAACTTCACTCCTTACTCATTCACCAGAGAATTT...AGAAGAATCCTTTAGGCACACACCCAGGAGTGATATAGCTAGGCAAAGTGTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | CAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAACCACAAGCTTCCGAATaGCAGAAAAATGCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTLHLIRQRGICSWHVFKPQASE*QKNAFS Trigger: GGAAAAGGCATTTTTCTGGCATTCGGAAGCTTGTGG...TTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAACCACAAGCTTCCGAATaGCAGAAAAATGCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDTAFNKAERYLLLACFQPQASE*QKNAFS Trigger: GGAAAAGGCATTTTTCTGGCATTCGGAAGCTTGTGG...TTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGTTCAAGTGCATTGTCTaGGGGCATGAAGAGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVFKCIV*GHEESR Trigger: CCTCGACTCTTCATGCCCCCAGACAATGCACTTGAA...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAGATTTCCTCAAACTGTaGCAAGGCTTCTTCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTAFNKAERYLLLACFQDFLKL*QGFFIP Trigger: TGGTATGAAGAAGCCTTGGCACAGTTTGAGGAAATC...TTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGTCCTTTTTCAGCATTTaGAATGGTCCCCAGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVSFFSI*NGPQPI Trigger: GATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGA...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGGCAGCGAATTTCAAGTaGATTGTCTGGGGGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVAANFK*IVWGHE Trigger: TTCATGCCCCCAGACAATGCACTTGAAATTCGCTGC...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTGTTCATTAAATTAAGATCTTTGAGGGCACATTTGGAGGGACATGATACTGCAGCGAATTTCAAGTaGATTGTCTGGGGGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLFIKLRSLRAHLEGHDTAANFK*IVWGHE Trigger: TTCATGCCCCCAGACAATGCACTTGAAATTCGCTGC...AGTATCATGTCCCTCCAAATGTGCCCTCAAAGATCTTAATTTAATGAACAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110381.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGGAGAGAAAGGGTTTTTaGGCAACTTCTCGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVERKGF*ATSRCS Trigger: TGAGCAGCGAGAAGTTGCCCAAAAACCCTTTCTCTC...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | ACTACACTTTGCCTAGCTATATCACTCCTGGGTGTGTGCCTAAAGGATTCTTCTTTTTCCTTCTTCCACTaGAAGAATTTCTGTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLCLAISLLGVCLKDSSFSFFH*KNFCCL Trigger: CAAACAACAGAAATTCTTCCAGTGGAAGAAGGAAAA...AGAAGAATCCTTTAGGCACACACCCAGGAGTGATATAGCTAGGCAAAGTGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110381.9 |
||
| CDS-3UTR CCA 90 bp | AAATTCGAAACCAAGGCAGTGGACTCTGATGCATCCATAATGAAAAACAGCATGAGTCTGCTATCCTTTTaGAAAACGAAACACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFETKAVDSDASIMKNSMSLLSF*KTKHTW Trigger: CCAAGTGTGTTTCGTTTTCCAAAAGGATAGCAGACT...CATGCTGTTTTTCATTATGGATGCATCAGAGTCCACTGCCTTGGTTTCGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110381.9 |
||
| CDS-3UTR TCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGTGTTTGGCAGCATACTaGGACAGAGAGAAAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVCLAAY*DREKGF Trigger: AAACCCTTTCTCTCTGTCTCAGTATGCTGCCAAACA...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | GTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTTTTCAGGAACTGCAATaGTGTATCCACCAAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTDTAFNKAERYLLLACFFQELQ*CIHQIS Trigger: GCTAATTTGGTGGATACAGCATTGCAGTTCCTGAAA...AAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAAC 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGCCACAAGCTTCCGAATaGCAGAAAAATGCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVPQASE*QKNAFS Trigger: GGAAAAGGCATTTTTCTGGCATTCGGAAGCTTGTGG...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR CCA 90 bp | GTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTAGTCTGCTATCCTTTTaGAAAACGAAACACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTDTAFNKAERYLLLACFSLLSF*KTKHTW Trigger: CCAAGTGTGTTTCGTTTTCCAAAAGGATAGCAGACT...AAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR CCA 90 bp | CAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAAGCTTTCTTGTTTATGTaGTCTGAGGGTCTAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLHLIRQRGICSWHVFKAFLFM*SEGLVF Trigger: AAAGACTAGACCCTCAGACCACATAAACAAGAAAGC...TTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTAAATTCTCTGGTGAATaGGTAAGGAGTGAAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTDTAFNKAERYLLLACFKFSGE*VRSEVH Trigger: ATGAACTTCACTCCTTACTCATTCACCAGAGAATTT...AAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGGATTTCCTCAAACTGTaGCAAGGCTTCTTCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVDFLKL*QGFFIP Trigger: TGGTATGAAGAAGCCTTGGCACAGTTTGAGGAAATC...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGTTTCAGGAACTGCAATaGTGTATCCACCAAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVFQELQ*CIHQIS Trigger: GCTAATTTGGTGGATACAGCATTGCAGTTCCTGAAA...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGAGAATTTCTGTTGTTTaGCAGCATACTGAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVRISVV*QHTETE Trigger: CTCTGTCTCAGTATGCTGCCAAACAACAGAAATTCT...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGAGTCTGCTATCCTTTTaGAAAACGAAACACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVSLLSF*KTKHTW Trigger: CCAAGTGTGTTTCGTTTTCCAAAAGGATAGCAGACT...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR TCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGAAATTCTCTGGTGAATaGGTAAGGAGTGAAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVKFSGE*VRSEVH Trigger: ATGAACTTCACTCCTTACTCATTCACCAGAGAATTT...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGAATCCTAGAATACTTTaGGCCTTCACACTAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVNPRIL*AFTLAF Trigger: AAAAGCTAGTGTGAAGGCGCAAAGTATTCTAGGATT...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGTTTTCCTTCTTCCACTaGAAGAATTTCTGTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVFSFFH*KNFCCL Trigger: CAAACAACAGAAATTCTTCCAGTGGAAGAAGGAAAA...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGCCTTTTCCAACTCTTTaGGCTCTTTCATTGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: MVFVEMLCSLSSLTECTVPFPTL*ALSLNK Trigger: TTTATTCAATGAAAGAGCCCAAAGAGTTGGAAAAGG...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR CAA 90 bp | CAAGAGTCCCCTGGGCATAGACATTCCCTCGCTCAGCTGCTTCCCGTAAGCAGTGCTTTTGGGTTTCCATaGTCGGCAGCAAGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QESPGHRHSLAQLLPVSSAFGFP*SAASSH Trigger: GTGGCTGCTTGCTGCCGACAATGGAAACCCAAAAGC...ACTGCTTACGGGAAGCAGCTGAGCGAGGGAATGTCTATGCCCAGGGGACTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGCACCCTGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATGCCAGAACTCCTTTTTCAGCATTaGCAATGGTCCCCAGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KCTLGLQTSVATSFRMPELLFQH*QWSPAH Trigger: ATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGAG...TTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS GCA 90 bp | CAGCATACTGAGACAGAGAGAAAGGGTTTTTGGGCAACTTCTCGCTaGTCAGCTTCATCCTGTCTCCACAATGTGGGTCCGGCCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QHTETERKGFWATSR*SASSCLHNVGPASV Trigger: AACACTGGCCGGACCCACATTGTGGAGACAGGATGAAGCTGAGCAGCGAGAAGTTGCCCAAAAACCCTTTCTCTCTGTCTCAGTATGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066451.10 |
||
| CDS-3UTR CAA 90 bp | GTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGGCTTTTGGGTTTCCATaGTCGGCAGCAAGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFALGMFSNPVQPRPLYRAFGFP*SAASSH Trigger: GTGGCTGCTTGCTGCCGACAATGGAAACCCAAAAGC...CCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CAA 90 bp | AGGTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGCTTTTGGGTTTCCATaGTCGGCAGCAAGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RYLLLACFQTQFSPGHSTAFGFP*SAASSH Trigger: GTGGCTGCTTGCTGCCGACAATGGAAACCCAAAAGC...TGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CAA 90 bp | GTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGGAGGGCCCAGCTTTCTaGTTTATGTGGTCTGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFALGMFSNPVQPRPLYREGPAF*FMWSEG Trigger: ACCCTCAGACCACATAAACAAGAAAGCTGGGCCCTC...CCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCACAAGAGTCCCCTGGGCATAGACATTCCCTCGCTCAGCTGCTTCCCGTACTGGAAGAATTTCTGTaGTTTGGCAGCATACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IPQESPGHRHSLAQLLPVLEEFL*FGSILR Trigger: TCTCAGTATGCTGCCAAACAACAGAAATTCTTCCAG...TACGGGAAGCAGCTGAGCGAGGGAATGTCTATGCCCAGGGGACTCTTGTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
||
| CDS GCA 90 bp | AGTGCACCCTGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATaGCAGAAAAATGCCTTTTCCAACTCTTTGGGCTCTTTCATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAPWDSRLPLPQASE*QKNAFSNSLGSFIE Trigger: TTCAATGAAAGAGCCCAAAGAGTTGGAAAAGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
||
| CDS-3UTR CAA 90 bp | GGTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGCGAATTTCAAGTGCATaGTCTGGGGGCATGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GICSWHVFKPSSAQATLQRISSA*SGGMKS Trigger: ACTCTTCATGCCCCCAGACAATGCACTTGAAATTCG...CTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CAA 90 bp | GTATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCGAATTTCAAGTGCATaGTCTGGGGGCATGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VFALGMFSNPVQPRPLYRRISSA*SGGMKS Trigger: ACTCTTCATGCCCCCAGACAATGCACTTGAAATTCG...CCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
||
| CDS-3UTR CAA 90 bp | TATTTGCTCTTGGCATGTTTTCAAACCCAGTTCAGCCCAGGCCACTCTACAGGCCTGGAAGAATTTCTGTaGTTTGGCAGCATACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YLLLACFQTQFSPGHSTGLEEFL*FGSILR Trigger: TCTCAGTATGCTGCCAAACAACAGAAATTCTTCCAG...GCCTGTAGAGTGGCCTGGGCTGAACTGGGTTTGAAAACATGCCAAGAGCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS TCA 90 bp | TTTTCCTTCTTCCACTGGAAGAATTTCTGTTGTTTGGCAGCATACTaGGACAGAGAGAAAGGGTTTTTGGGCAACTTCTCGCTGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: FSFFHWKNFCCLAAY*DREKGFLGNFSLLS Trigger: GCTGAGCAGCGAGAAGTTGCCCAAAAACCCTTTCTCTCTGTCTCAGTATGCTGCCAAACAACAGAAATTCTTCCAGTGGAAGAAGGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS TCA 90 bp | GAGGTTGTAAGCAGCAGCGAATTTCAAGTGCATTGTCTGGGGGCATaGAGAGTCGAGGATCTTCCTCATATAATTCACTCCTTTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: EVVSSSEFQVHCLGA*RVEDLPHIIHSFFS Trigger: GCTGAAAAAGGAGTGAATTATATGAGGAAGATCCTCGACTCTTCATGCCCCCAGACAATGCACTTGAAATTCGCTGCTGCTTACAACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS GCA 90 bp | CTGATAAATTGCTTGATGGTCTTTCTCCTGGATTTCCTCAAACTGTaGCAAGGCTTCTTCATACCAGCCCTCTTCAAAATAGAGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LINCLMVFLLDFLKL*QGFFIPALFKIELA Trigger: GGCCAACTCTATTTTGAAGAGGGCTGGTATGAAGAAGCCTTGGCACAGTTTGAGGAAATCCAGGAGAAAGACCATCAAGCAATTTATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS-3UTR CAA 90 bp | GTAGTTACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTCTCCTTTTTCAGCATTaGCAATGGTCCCCAGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: VVTDTAFNKAERYLLLACLLFQH*QWSPAH Trigger: ATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGAG...ACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGTAACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 |
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| CDS GCA 90 bp | TGCCATAGCATCCCCTCTTCTTATTCTTTCTTTCAGGAACTGCAATaGTGTATCCACCAAATTAGCGTGGAGGTAATAATCGGGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: CHSIPSSYSFFQELQ*CIHQISVEVIIGLF Trigger: GAAAAGCCCGATTATTACCTCCACGCTAATTTGGTGGATACAGCATTGCAGTTCCTGAAAGAAAGAATAAGAAGAGGGGATGCTATGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS-3UTR CAA 90 bp | CAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAAACTCCTTTTTCAGCATTaGCAATGGTCCCCAGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: QTLHLIRQRGICSWHVFKLLFQH*QWSPAH Trigger: ATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGAG...TTTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGGCTTTTGGGTTTCCATaGTCGGCAGCAAGCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: MVFVEMLCSLSSLTECTVAFGFP*SAASSH Trigger: GTGGCTGCTTGCTGCCGACAATGGAAACCCAAAAGC...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS-3UTR CAA 90 bp | CCATATTTATCTCTGCACTCTTCACAGCTAGGAAGTGCAACCAGCTTCCATTTACTGGAAGAATTTCTGTaGTTTGGCAGCATACTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PYLSLHSSQLGSATSFHLLEEFL*FGSILR Trigger: TCTCAGTATGCTGCCAAACAACAGAAATTCTTCCAG...TAAATGGAAGCTGGTTGCACTTCCTAGCTGTGAAGAGTGCAGAGATAAATATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110381.9 |
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| CDS-3UTR CAA 90 bp | ACAGACACTGCATTTAATAAGGCAGAGAGGTATTTGCTCTTGGCATGTTTTCAACGAATTTCAAGTGCATaGTCTGGGGGCATGAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: TDTAFNKAERYLLLACFQRISSA*SGGMKS Trigger: ACTCTTCATGCCCCCAGACAATGCACTTGAAATTCG...TTGAAAACATGCCAAGAGCAAATACCTCTCTGCCTTATTAAATGCAGTGTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS CCA 90 bp | CGAGGATCTTCCTCATATAATTCACTCCTTTTTCAGCATTTGCAATaGTCCCCAGCCCATCATAATACATCACTCCTAGCTGATAAATTG | + |
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Preference number: 5 (lower is better) Translates to: RGSSSYNSLLFQHLQ*SPAHHNTSLLADKL Trigger: CAATTTATCAGCTAGGAGTGATGTATTATGATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGAGTGAATTATATGAGGAAGATCCTCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGCTCCTTTTTCAGCATTaGCAATGGTCCCCAGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: MVFVEMLCSLSSLTECTVLLFQH*QWSPAH Trigger: ATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGAG...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGCGAATTTCAAGTGCATaGTCTGGGGGCATGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MVFVEMLCSLSSLTECTVRISSA*SGGMKS Trigger: ACTCTTCATGCCCCCAGACAATGCACTTGAAATTCG...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGCTGGAAGAATTTCTGTaGTTTGGCAGCATACTGAGA | + |
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Preference number: 5 (lower is better) Translates to: MVFVEMLCSLSSLTECTVLEEFL*FGSILR Trigger: TCTCAGTATGCTGCCAAACAACAGAAATTCTTCCAG...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCTTTGTTGAAATGCTTTGTAGTTTAAGTTCTTTGACAGAATGCACTGTGCTCCTAGCTGATAAATaGCTTGATGGTCTTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: MVFVEMLCSLSSLTECTVLLADK*LDGLSP Trigger: AGGAGAAAGACCATCAAGCAATTTATCAGCTAGGAG...CACAGTGCATTCTGTCAAAGAACTTAAACTACAAAGCATTTCAACAAAGACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS TCA 72 bp | CACAAGCTTCCGAATGCCAGAAAAATGCCTAGGAAGTaGGGGAAGGCCTGCACCTGCCAGGAGACGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: HKLPNARKMPRK*GKACTCQETHS Trigger: TGAGTGCGTCTCCTGGCAGGTGCAGGCCTTCCCTCACTTCCTAGGCATTTTTCTGGCATTCGGAAGCTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
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| CDS GCA 72 bp | ACTTCCGTTGCCACAAGCTTCCGAATGCCAGAAAAATaGCTAGGAAGTGAGGGAAGGCCTGCACCTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TSVATSFRMPEK*LGSEGRPAPAR Trigger: CCTGGCAGGTGCAGGCCTTCCCTCACTTCCTAGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132341.2 |
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| CDS CAA 72 bp | GCCTCATGGCAAGCCATTCCGGAGGGCCCAGCTTTCTaGTTTATGTGGTCTGAGGGTCTAGTCTTTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: ASWQAIPEGPAF*FMWSEGLVFSN Trigger: GTTGGAAAAGACTAGACCCTCAGACCACATAAACAAGAAAGCTGGGCCCTCCGGAATGGCTTGCCATGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| CDS TCA 72 bp | GGCAGCAAGCAGCCACAGTCTCTCTGCTTCCTCATCTaGTCGCTTCACCCCCTTTCCTTCAAAATAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSKQPQSLCFLI*SLHPLSFKISS Trigger: AGAGCTTATTTTGAAGGAAAGGGGGTGAAGCGATCAGATGAGGAAGCAGAGAGACTGTGGCTGCTTGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS CCA 72 bp | CAAGCCATTCCGGAGGGCCCAGCTTTCTTGTTTATGTaGTCTGAGGGTCTAGTCTTTTCCAACTCTTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QAIPEGPAFLFM*SEGLVFSNSLG Trigger: GCCCAAAGAGTTGGAAAAGACTAGACCCTCAGACCACATAAACAAGAAAGCTGGGCCCTCCGGAATGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| CDS CAA 72 bp | TCCCGAGGTTGTAAGCAGCAGCGAATTTCAAGTGCATaGTCTGGGGGCATGAAGAGTCGAGGATCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRGCKQQRISSA*SGGMKSRGSSS Trigger: TGAGGAAGATCCTCGACTCTTCATGCCCCCAGACAATGCACTTGAAATTCGCTGCTGCTTACAACCTCGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS CAA 72 bp | ATACTTTGCGCCTTCACACTAGCTTTTGGGTTTCCATaGTCGGCAGCAAGCAGCCACAGTCTCTCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ILCAFTLAFGFP*SAASSHSLSAS Trigger: GGAAGCAGAGAGACTGTGGCTGCTTGCTGCCGACAATGGAAACCCAAAAGCTAGTGTGAAGGCGCAAAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS CAA 72 bp | ATGAGACCAAGTGCACCCTGGGACTCCAGACTTCCGTaGCCACAAGCTTCCGAATGCCAGAAAAATGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: MRPSAPWDSRLP*PQASECQKNAF Trigger: AAAGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCAGGGTGCACTTGGTCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
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| CDS GCA 72 bp | TGGGACTCCAGACTTCCGTTGCCACAAGCTTCCGAATaGCAGAAAAATGCCTTTTCCAACTCTTTGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: WDSRLPLPQASE*QKNAFSNSLGS Trigger: AGAGCCCAAAGAGTTGGAAAAGGCATTTTTCTGGCATTCGGAAGCTTGTGGCAACGGAAGTCTGGAGTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 |
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| CDS CCA 72 bp | GTTTGGCAGCATACTGAGACAGAGAGAAAGGGTTTTTaGGCAACTTCTCGCTGCTCAGCTTCATCCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: VWQHTETERKGF*ATSRCSASSCL Trigger: GAGACAGGATGAAGCTGAGCAGCGAGAAGTTGCCCAAAAACCCTTTCTCTCTGTCTCAGTATGCTGCCAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066451.10 |
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| CDS TCA 72 bp | CATTCCGGAGGGCCCAGCTTTCTTGTTTATGTGGTCTaGGGGTCTAGTCTTTTCCAACTCTTTGGGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: HSGGPSFLVYVV*GSSLFQLFGLF Trigger: AAAGAGCCCAAAGAGTTGGAAAAGACTAGACCCTCAGACCACATAAACAAGAAAGCTGGGCCCTCCGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145597.8 |
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| CDS CAA 90 bp | AATCCTAGAATACTTTGCGCCTTCACACTAGCTTTTGGGTTTCCATaGTCGGCAGCAAGCAGCCACAGTCTCTCTGCTTCCTCATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: NPRILCAFTLAFGFP*SAASSHSLSASSSD Trigger: ATCAGATGAGGAAGCAGAGAGACTGTGGCTGCTTGCTGCCGACAATGGAAACCCAAAAGCTAGTGTGAAGGCGCAAAGTATTCTAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS CAA 90 bp | CAATGGTCCCCAGCCCATCATAATACATCACTCCTAGCTGATAAATaGCTTGATGGTCTTTCTCCTGGATTTCCTCAAACTGTGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QWSPAHHNTSLLADK*LDGLSPGFPQTVPR Trigger: CCTTGGCACAGTTTGAGGAAATCCAGGAGAAAGACCATCAAGCAATTTATCAGCTAGGAGTGATGTATTATGATGGGCTGGGGACCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS CAA 90 bp | AATAAGCTCTCCCGAGGTTGTAAGCAGCAGCGAATTTCAAGTGCATaGTCTGGGGGCATGAAGAGTCGAGGATCTTCCTCATATAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: NKLSRGCKQQRISSA*SGGMKSRGSSSYNS Trigger: TGAATTATATGAGGAAGATCCTCGACTCTTCATGCCCCCAGACAATGCACTTGAAATTCGCTGCTGCTTACAACCTCGGGAGAGCTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS GCA 72 bp | GATCTTCCTCATATAATTCACTCCTTTTTCAGCATTTaGAATGGTCCCCAGCCCATCATAATACATCACTCC | + |
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Preference number: 6 (lower is better) Translates to: DLPHIIHSFFSI*NGPQPIIIHHS Trigger: GGAGTGATGTATTATGATGGGCTGGGGACCATTGCAAATGCTGAAAAAGGAGTGAATTATATGAGGAAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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| CDS CAA 72 bp | CCAGCCCATCATAATACATCACTCCTAGCTGATAAATaGCTTGATGGTCTTTCTCCTGGATTTCCTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: PAHHNTSLLADK*LDGLSPGFPQT Trigger: AGTTTGAGGAAATCCAGGAGAAAGACCATCAAGCAATTTATCAGCTAGGAGTGATGTATTATGATGGGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066451.10 ENSMUST00000110380.8 ENSMUST00000110381.9 ENSMUST00000145597.8 |
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