RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027070

Ensembl transcript IDs: ENSMUST00000080953.12, ENSMUST00000092551.5, ENSMUST00000100051.9

Found 844 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCACAGCTGGGGTTAGAAGACAGAGGCACGTGGAAGGGTCCAACTaGATCACTTTGTGTACCTTCTGTGTGGTCAGAAGCGTCTACAGT +
Preference number: 1 (lower is better)
Translates to: VTAGVRRQRHVEGSN*ITLCTFCVVRSVYS
Trigger: ACTGTAGACGCTTCTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGTCTTCTAACCCCAGCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CCA 90 bp GGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTaGTCAGAAGCGTCTACAGTGTATGAAGCCAACACTGGCCCCTAT +
Preference number: 1 (lower is better)
Translates to: GTWKGPTESLCVPSV*SEASTVYEANTGPY
Trigger: ATAGGGGCCAGTGTTGGCTTCATACACTGTAGACGCTTCTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CCA 90 bp AGAAACTCAGTGTGGGACGTGACATGGCAGATACAGATGTTGACTTaGCAATTAGGGTCACAGCTGGGGTTAGAAGACAGAGGCACGTGG +
Preference number: 1 (lower is better)
Translates to: RNSVWDVTWQIQMLT*QLGSQLGLEDRGTW
Trigger: CCACGTGCCTCTGTCTTCTAACCCCAGCTGTGACCCTAATTGCCAAGTCAACATCTGTATCTGCCATGTCACGTCCCACACTGAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CCA 90 bp ACTTGGCAATTAGGGTCACAGCTGGGGTTAGAAGACAGAGGCACGTaGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCA +
Preference number: 1 (lower is better)
Translates to: TWQLGSQLGLEDRGT*KGPTESLCVPSVWS
Trigger: TGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGTCTTCTAACCCCAGCTGTGACCCTAATTGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CCA 90 bp CACCAGAGGCATTTAAAAGCCAAGTGTGAACTGAGAGCTAAGACCTaGCCATGTGCATCAGTGGAAGTAATGAAGGAAAGAGGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: HQRHLKAKCELRAKT*PCASVEVMKERGRE
Trigger: CTCCCTCCCTCTTTCCTTCATTACTTCCACTGATGCACATGGCCAGGTCTTAGCTCTCAGTTCACACTTGGCTTTTAAATGCCTCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
3UTR TCA 90 bp ATCACTTTGTGTACCTTCTGTGTGGTCAGAAGCGTCTACAGTGTATaGAGCCAACACTGGCCCCTATTGGTACACTTACTAATCAGGTTG +
Preference number: 1 (lower is better)
Translates to: ITLCTFCVVRSVYSV*SQHWPLLVHLLIRL
Trigger: CAACCTGATTAGTAAGTGTACCAATAGGGGCCAGTGTTGGCTTCATACACTGTAGACGCTTCTGACCACACAGAAGGTACACAAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CCA 90 bp CAGTTTGCACCCAGAGCCAAACACCCAGCTGAGGTTTCGATTAACTaGTATCTGTTTGGCACCCTACTTTATGAAGTAGGTTTGGTTTTA +
Preference number: 1 (lower is better)
Translates to: QFAPRAKHPAEVSIN*YLFGTLLYEVGLVL
Trigger: TAAAACCAAACCTACTTCATAAAGTAGGGTGCCAAACAGATACCAGTTAATCGAAACCTCAGCTGGGTGTTTGGCTCTGGGTGCAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR TCA 90 bp GAGGGAGGGAGGAAAGGAATTAAAATCAACACTCCGAACCAGTTATaGCAGACTGATCTCCATCAGTCTAGGAATATCCATAGAATACCT +
Preference number: 1 (lower is better)
Translates to: EGGRKGIKINTPNQL*QTDLHQSRNIHRIP
Trigger: AGGTATTCTATGGATATTCCTAGACTGATGGAGATCAGTCTGTCATAACTGGTTCGGAGTGTTGATTTTAATTCCTTTCCTCCCTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
3UTR TCA 90 bp ACCGCCCACGTACTAGGATTACAACCGTATGCCATCCCTCCAAACTaGTCATGGGCATACTATCTATATATCATAATCATATATCATATT +
Preference number: 1 (lower is better)
Translates to: TAHVLGLQPYAIPPN*SWAYYLYIIIIYHI
Trigger: AATATGATATATGATTATGATATATAGATAGTATGCCCATGATCAGTTTGGAGGGATGGCATACGGTTGTAATCCTAGTACGTGGGCGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
3UTR TCA 90 bp CTTCTGAAATTTACACAAGTACAATATATTCACAGCATCACCTCCTaGCAACATCAGTGCAAGATATACACAGTACCTCATGATAATTGT +
Preference number: 1 (lower is better)
Translates to: LLKFTQVQYIHSITS*QHQCKIYTVPHDNC
Trigger: ACAATTATCATGAGGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATATTGTACTTGTGTAAATTTCAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR-3UTR GCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTGGGTCACATGAGCAGTaGACTTTCAGAAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRGSHEQ*TFRRHQ
Trigger: CTGGTGCCTTCTGAAAGTGCACTGCTCATGTGACCC...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
3UTR-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGAAACGGACCCACAAATaGAGCTTAAAGGGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQKRTHK*SLKGFL
Trigger: AAGAAAGCCCTTTAAGCTTCATTTGTGGGTCCGTTT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR-3UTR CCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTAGAGAAAAAGAAAAATaGTTGCTCATGTGGGTCACA +
Preference number: 2 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRREKEK*LLMWVT
Trigger: TGTGACCCACATGAGCAACCATTTTTCTTTTTCTCT...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
3UTR-3UTR CCA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCGGTGATACAATAGCCTaGGTCAGTAAAGAAGCCATT +
Preference number: 2 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGGDTIA*VSKEAI
Trigger: AATGGCTTCTTTACTGACCCAGGCTATTGTATCACC...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
3UTR-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAACATACAGTACATCCTaGCACAAACGTACAGCTTTA +
Preference number: 2 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILTYSTS*HKRTAL
Trigger: TAAAGCTGTACGTTTGTGTCAGGATGTACTGTATGT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGTTATTGATTAAGTGCTaGCATGTAAAAACGGACCCA +
Preference number: 2 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLLLIKC*HVKTDP
Trigger: TGGGTCCGTTTTTACATGTCAGCACTTAATCAATAA...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR TCA 72 bp GGGGTTAGAAGACAGAGGCACGTGGAAGGGTCCAACTaGATCACTTTGTGTACCTTCTGTGTGGTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: GVRRQRHVEGSN*ITLCTFCVVRS
Trigger: GCTTCTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGTCTTCTAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CCA 72 bp TTAGGGTCACAGCTGGGGTTAGAAGACAGAGGCACGTaGAAGGGTCCAACTGAATCACTTTGTGTACCTTCT +
Preference number: 3 (lower is better)
Translates to: LGSQLGLEDRGT*KGPTESLCVPS
Trigger: AGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGTCTTCTAACCCCAGCTGTGACCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CCA 72 bp GTGTGGGACGTGACATGGCAGATACAGATGTTGACTTaGCAATTAGGGTCACAGCTGGGGTTAGAAGACAGA +
Preference number: 3 (lower is better)
Translates to: VWDVTWQIQMLT*QLGSQLGLEDR
Trigger: TCTGTCTTCTAACCCCAGCTGTGACCCTAATTGCCAAGTCAACATCTGTATCTGCCATGTCACGTCCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CCA 72 bp CCCAGAGCCAAACACCCAGCTGAGGTTTCGATTAACTaGTATCTGTTTGGCACCCTACTTTATGAAGTAGGT +
Preference number: 3 (lower is better)
Translates to: PRAKHPAEVSIN*YLFGTLLYEVG
Trigger: ACCTACTTCATAAAGTAGGGTGCCAAACAGATACCAGTTAATCGAAACCTCAGCTGGGTGTTTGGCTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR-3UTR CAA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTTTAAAGGTTAAACATTaGTGCCAATCAACTGCAGCC +
Preference number: 3 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRLKVKH*CQSTAA
Trigger: GGCTGCAGTTGATTGGCACAAATGTTTAACCTTTAA...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
3UTR CCA 72 bp AAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTaGTCAGAAGCGTCTACAGTGTATGAAGCCAACACT +
Preference number: 3 (lower is better)
Translates to: KGPTESLCVPSV*SEASTVYEANT
Trigger: AGTGTTGGCTTCATACACTGTAGACGCTTCTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR TCA 72 bp GTTGATTTAAGGTCTGTCAAGCAAGAGCTCATTCAATaGAACAGAAACTCAGTGTGGGACGTGACATGGCAG +
Preference number: 3 (lower is better)
Translates to: VDLRSVKQELIQ*NRNSVWDVTWQ
Trigger: CTGCCATGTCACGTCCCACACTGAGTTTCTGTTTCATTGAATGAGCTCTTGCTTGACAGACCTTAAATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR TCA 72 bp GTACTAGGATTACAACCGTATGCCATCCCTCCAAACTaGTCATGGGCATACTATCTATATATCATAATCATA +
Preference number: 3 (lower is better)
Translates to: VLGLQPYAIPPN*SWAYYLYIIII
Trigger: TATGATTATGATATATAGATAGTATGCCCATGATCAGTTTGGAGGGATGGCATACGGTTGTAATCCTAGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp CTGAAACTCAGCGGAGCAGTGGCGCACGCCTTTAATCTCAGCACTCAGGAGGCAGAACACACTGACCATTaGAGCACGTCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKLSGAVAHAFNLSTQEAEHTDH*STSAAG
Trigger: GCCAGCAGCTGACGTGCTCCAATGGTCAGTGTGTTC...TGCCTCCTGAGTGCTGAGATTAAAGGCGTGCGCCACTGCTCCGCTGAGTTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTACAAGACCCCACGGGTaGGCCAGGTGGTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLITRPHG*ARWCTR
Trigger: CCTGGTGCACCACCTGGCCCACCCGTGGGGTCTTGT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTCACATTCTTGGCCACTaGCTGGCGCCAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRHILGH*LAPGRQ
Trigger: CTGCCTGCCTGGCGCCAGTCAGTGGCCAAGAATGTG...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACGTCAGCTGCTGGCTTaGGCACGTGGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPRQLLA*ARGPRA
Trigger: TGCCCTGGGACCACGTGCTCAAGCCAGCAGCTGACG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTGAAACTCAGCGGAGCAGTGGCGCACGCCTTTAATCTCAGCACTCAGGAGGCACGTCAGAGGAGTCCCTaGAGTCAACTTTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LKLSGAVAHAFNLSTQEARQRSP*SQLCGH
Trigger: GTGACCACAAAGTTGACTGCAGGGACTCCTCTGACG...TGCCTCCTGAGTGCTGAGATTAAAGGCGTGCGCCACTGCTCCGCTGAGTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTAGTGTCATGGTCCACTaGCAGGCCCCGAGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLISVMVH*QAPRGD
Trigger: GTCACCCCTCGGGGCCTGGCAGTGGACCATGACACT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTGTTAAGCTCTGCCGGTaGGAGGGGCTGGACATGCTC +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGVKLCR*EGLDML
Trigger: GAGCATGTCCAGCCCCTCTCACCGGCAGAGCTTAAC...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACGGAAGCAGAAATGGCTaGAGTCGCCGTTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHGSRNG*SRRWDG
Trigger: CCCATCCCAACGGCGACTGCAGCCATTTCTGCTTCC...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTGGCCAGATACCAGCTaGCTTCGTGTGGACACTGGC +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHWPDTS*LRVDTG
Trigger: GCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCA...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACCCCATCTCGATGCAGTaGCCGTTGTCACACCGGAAC +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHPISMQ*PLSHRN
Trigger: GTTCCGGTGTGACAACGGGCACTGCATCGAGATGGG...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTGGGGGCTCGTGCAGTTaGCATCTCGGCACTGGAACT +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIGGSCS*HLGTGT
Trigger: AGTTCCAGTGCCGAGATGGCAACTGCACGAGCCCCC...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTAAGCCTGGGGGCTCGTaGAGTTGCCATCTCGGCACT +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGKPGGS*SCHLGT
Trigger: AGTGCCGAGATGGCAACTGCACGAGCCCCCAGGCTT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTGCTCTCCCATCGCATaGCAACGCCTTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHCSPIA*QRLGHT
Trigger: TGTGTGCCCAAGGCGTTGGCATGCGATGGGAGAGCA...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTTTCTTGGCCACTGACTaGCGCCAGGCAGGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIFLATD*RQAGSD
Trigger: ATCGCTGCCTGCCTGGCGCCAGTCAGTGGCCAAGAA...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCCGTCAGCTGCTGGCTTaGGCACGTGGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGRQLLA*ARGPRA
Trigger: TGCCCTGGGACCACGTGCTCAAGCCAGCAGCTGACG...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR TCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACCGTGCATTATGCTGCTaGTGCCACGTCGAACAACGG +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHRALCC*CHVEQR
Trigger: CCGTTGTTCGACGTGGCATCAGCAGCATAATGCACG...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACACAGGGCGCTCAGATTaGCACAGATGCTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHTGRSD*HRCCSL
Trigger: CAGGCTACAGCATCTGTGTCAATCTGAGCGCCCTGT...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAACTTGTTGGCCTGCATaGCCTGGTGAGTGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPTCWPA*PGECRG
Trigger: ACCGCGGCACTCACCAGGTCATGCAGGCCAACAAGT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTGAAACTCAGCGGAGCAGTGGCGCACGCCTTTAATCTCAGCACTCAGGAGGCAATCACACCTCCAGGATaGAGGGATACAGTATCCGTT +
Preference number: 4 (lower is better)
Translates to: LKLSGAVAHAFNLSTQEAITPPG*RDTVSV
Trigger: AACGGATACTGTATCCCTGCATCCTGGAGGTGTGAT...TGCCTCCTGAGTGCTGAGATTAAAGGCGTGCGCCACTGCTCCGCTGAGTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACCGCACTGGAACTCATTaGTGCGGCATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHRTGTH*CGMCVR
Trigger: CCTCACACACATGCCGCAGCAATGAGTTCCAGTGCG...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTCCCCATCTCGATaGAGTGCCCGTTGTCACACC +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGQSPSR*SARCHT
Trigger: GGTGTGACAACGGGCACTGCATCGAGATGGGGACTG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGACTGGGAAGCAGAAATaGCTGCAGTCGCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQTGKQK*LQSPLG
Trigger: TCCCAACGGCGACTGCAGCCATTTCTGCTTCCCAGT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTTGGGCCAAACCAGGCTaGTGTTCACAATGGGGACCC +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIWAKPG*CSQWGP
Trigger: GGGTCCCCATTGTGAACACCAGCCTGGTTTGGCCCA...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACCAGCTGCCTTCGTGTaGACACTGGCACTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPPAAFV*TLALSS
Trigger: GGAGCTGAGTGCCAGTGTCCACACGAAGGCAGCTGG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCGGCCATTGGAGCAAGTaGACTGGTGGCCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGGHWSK*TGGLRR
Trigger: CCTGCGGAGGCCACCAGTTCACTTGCTCCAATGGCC...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR TCA 90 bp CTGAAACTCAGCGGAGCAGTGGCGCACGCCTTTAATCTCAGCACTCAGGAGGCAACAAACTTTATCCATTaGGATGCATCGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LKLSGAVAHAFNLSTQEATNFIH*DASSRP
Trigger: GGGTCTGGACGATGCATCTCAATGGATAAAGTTTGT...TGCCTCCTGAGTGCTGAGATTAAAGGCGTGCGCCACTGCTCCGCTGAGTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR TCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTATCCACTGAGACTTTaGGGAGGACACGGCGGTATG +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHYPLRL*GGHGGM
Trigger: CATACCGCCGTGTCCTCCTCAAAGTCTCAGTGGATA...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACCAGGCCCCGAGGGGTaGCAATGCCTTCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPPGPEG*QCLQKQ
Trigger: TTGTTTCTGAAGGCATTGTCACCCCTCGGGGCCTGG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGGCTGCATCCTCCATTaGACTGGTCACAAGGATTGC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQGCILH*TGHKDC
Trigger: GCAATCCTTGTGACCAGTTCAATGGAGGATGCAGCC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGCCCATTGGCACAAGTaGAGGCTGTTGATCGGCACG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPAHWHK*RLLIGT
Trigger: CGTGCCGATCAACAGCCTTCACTTGTGCCAATGGGC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACGAGGGGATGCATTGCTaGTCAGCACATCGAAACTCG +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHEGMHC*SAHRNS
Trigger: CGAGTTTCGATGTGCTGATCAGCAATGCATCCCCTC...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGCATCAGCCCCTGATCTaGAAGTCACCCCGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQHQPLI*KSPRFH
Trigger: ATGGAAACGGGGTGACTTTCAGATCAGGGGCTGATG...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGCGTCAGAGGAGTCCCTaGAGTCAACTTTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQRQRSP*SQLCGH
Trigger: GTGACCACAAAGTTGACTGCAGGGACTCCTCTGACG...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCGGGTGGGCCAGGTGGTaGACCAGGATCATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSGWARW*TRIILS
Trigger: AGAGAGGATGATCCTGGTGCACCACCTGGCCCACCC...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTCACACAGGAACTGCGTaGTGGAGCACATGGGCATAC +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIHTGTA*WSTWAY
Trigger: GTATGCCCATGTGCTCCAGCACGCAGTTCCTGTGTG...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTGTCCGGCTGGCACAGTaGGAAGGGTCTTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIVRLAQ*EGSSSE
Trigger: TTCAGATGAAGACCCTTCGCACTGTGCCAGCCGGAC...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACGAAACTCGCTCTCTGTaGACTCCCGAGGAACACAAC +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHETRSL*TPEEHN
Trigger: GTTGTGTTCCTCGGGAGTGCACAGAGAGCGAGTTTC...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTAACTTCCTCCGTGCATaGACCTGCATGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLINFLRA*TCMGKA
Trigger: TGCCTTCCCCATGCAGGTGCATGCACGGAGGAAGTT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTGAAACTCAGCGGAGCAGTGGCGCACGCCTTTAATCTCAGCACTCAGGAGGCATCACAAACCCAGTTCTaGTTAATGCACTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: LKLSGAVAHAFNLSTQEASQTQF*LMHWPL
Trigger: CAATGGCCAGTGCATTAACCAGAACTGGGTTTGTGA...TGCCTCCTGAGTGCTGAGATTAAAGGCGTGCGCCACTGCTCCGCTGAGTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGCCACTGGCACCATaGCCTCTGAGTGATCAGACA +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGQPLAP*PLSDQT
Trigger: TGTCTGATCACTCAGAGGCCATGGTGCCAGTGGCTG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTCCTTCGTGTGGACACTaGCACTCAGCTCCGTTTGGA +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIPSCGH*HSAPFG
Trigger: TCCAAACGGAGCTGAGTGCCAGTGTCCACACGAAGG...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTGCGTGCTGGAGCACATaGGCATACAGAGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIACWST*AYRVSC
Trigger: ACAGGACACTCTGTATGCCCATGTGCTCCAGCACGC...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCTCAGCAGGCAGAGGTaGCTACAGACCTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGLSRQR*LQTCLQ
Trigger: TTGCAAGCAGGTCTGTAGCCACCTCTGCCTGCTGAG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACAGGGGAGGCTGGCTTTaGCTCTGGAACTATCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHRGGWL*LWNYLR
Trigger: TCTGAGATAGTTCCAGAGCCAAAGCCAGCCTCCCCT...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTGATTGCTACCATCCATaGAGGCTCTCTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIDCYHP*RLSPPW
Trigger: CCAAGGTGGAGAGAGCCTTCATGGATGGTAGCAATC...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACTTATTCCAAACGGATaGGGGACGAGGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPLIPNG*GTREPP
Trigger: TGGAGGCTCCCTCGTCCCTCATCCGTTTGGAATAAG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTAGGACCCTCTCATGTTaGCACAGTGCTGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGRTLSC*HSAGCK
Trigger: TTTGCAGCCAGCACTGTGTCAACATGAGAGGGTCCT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAAGTCCGGCTGGCAAGTaGTGGGAGGGCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPSPAGK*WEGSFS
Trigger: AGAAAAACTGCCCTCCCATCACTTGCCAGCCGGACT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGCTAAGAACACAGATCTaGGCACAGCCCCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQLRTQI*AQPPLL
Trigger: CAACAATGGGGGCTGTGCGCAGATCTGTGTTCTTAG...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTACTGGGCACACACTTaGCATTGTTGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHYWAHT*HCCRER
Trigger: CCTTTCCCTGCAACAATGGCAAGTGTGTGCCCAGTA...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGATTGGTTCCTCCCGTaGCACTTGTTGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPDWFLP*HLLACM
Trigger: CATGCAGGCCAACAAGTGGCACGGGAGGAACCAATC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTACGCTGTCCTGTTGCTaGCATCGGTCTTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLITLSCC*HRSSLC
Trigger: ACAGAGTGAAGACCGATGGCAGCAACAGGACAGCGT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGCTAAAGCCTCTAACTaGAGGCAGCATGGAAACGAC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQAKASN*RQHGND
Trigger: GTCGTTTCCATGCTGCCTGCAGTTAGAGGCTTTAGC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTTGCTACCCAATCCACTaGCACACCCCGGATTCCATT +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLICYPIH*HTPDSI
Trigger: AATGGAATCCGGGGTGTGGCAGTGGATTGGGTAGCA...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTACTGGTCACAAGGATTaGTACACTGCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLITGHKD*YTAAAG
Trigger: CCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACGATACACCGTCCATTTaGACAGCTGAACTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHDTPSI*TAELSR
Trigger: ACGGGAGAGTTCAGCTGTGCAAATGGACGGTGTATC...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAAAAACCATTGCACACTaGCCACTGCGGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPKTIAH*PLRDAA
Trigger: CGCTGCATCCCGCAGTGGGCAGTGTGCAATGGTTTT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTACCGATTCACAGCCTTaGTCGTCACTGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLITDSQP*SSLLSL
Trigger: CAGGGACAACAGTGACGAGCAAGGCTGTGAATCGGT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCTTCTTGGCCACTGACTaGCGCCAGGCAGGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGFLATD*RQAGSD
Trigger: ATCGCTGCCTGCCTGGCGCCAGTCAGTGGCCAAGAA...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCCCACTGCCACATTCTTaGCCACTGACTGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGPLPHS*PLTGAR
Trigger: CCTGGCGCCAGTCAGTGGCCAAGAATGTGGCAGTGG...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTCTGAACCGCAGGACCTaGGAGGACAGCCAATTTCAT +
Preference number: 4 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRLNRRT*EDSQFH
Trigger: ATGAAATTGGCTGTCCTCCCAGGTCCTGCGGTTCAG...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGAACACACTGACCATTaGAGCACGTCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPEHTDH*STSAAG
Trigger: GCCAGCAGCTGACGTGCTCCAATGGTCAGTGTGTTC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTGAAACTCAGCGGAGCAGTGGCGCACGCCTTTAATCTCAGCACTCAGGAGGCATCTCCACTGCCACATTaGAATTCTTTTTGCGAACAC +
Preference number: 4 (lower is better)
Translates to: LKLSGAVAHAFNLSTQEASPLPH*NSFCEH
Trigger: GTGTTCGCAAAAAGAATTCCAATGTGGCAGTGGAGA...TGCCTCCTGAGTGCTGAGATTAAAGGCGTGCGCCACTGCTCCGCTGAGTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGAGAGACCACTGTCATaGACCACTCTCTTGTCGGTT +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQERPLS*TTLLSV
Trigger: AACCGACAAGAGAGTGGTCCATGACAGTGGTCTCTC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTAGTGGCAGAGGCACATaGATTCGGGGAAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGSGRGT*IRGRWL
Trigger: CAACCATCTTCCCCGAATCCATGTGCCTCTGCCACT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTTAAGCTTGGCAGCTTaGGCAGAGAGGGTAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHLSLAA*AERVKG
Trigger: CCCTTTTACCCTCTCTGCCCAAGCTGCCAAGCTTAA...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCACATTCTTGGCCACTaGCTGGCGCCAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLHILGH*LAPGRQ
Trigger: CTGCCTGCCTGGCGCCAGTCAGTGGCCAAGAATGTG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGGCCATTGGAGCAAGTaGACTGGTGGCCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTGHWSK*TGGLRR
Trigger: CCTGCGGAGGCCACCAGTTCACTTGCTCCAATGGCC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCATACAAGATCCAGAGTaGTCCCAGCAGGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSIQDPE*SQQATP
Trigger: TGGGGTGGCCTGCTGGGATCACTCTGGATCTTGTAT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGAGGGTTGGTGTCTGTaGACTTGTTTGCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQEGWCL*TCLPSS
Trigger: TGATGAAGGCAAACAAGTTCACAGACACCAACCCTC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCCTGGGTGGAGAGGGTaGATGGGATCCCACGCACAG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTPGWRG*MGSHAQ
Trigger: CTGTGCGTGGGATCCCATTCACCCTCTCCACCCAGG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACCAGGTCCCCGAAGCTTaGCAGTTCTTTTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHQVPEA*QFFSSD
Trigger: ATCAGATGAAAAGAACTGTCAAGCTTCGGGGACCTG...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCCCGTTGCTGCAAGTaGACTCTGTGGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSSRCCK*TLWCCC
Trigger: GCAACAGCACCACAGAGTTCACTTGCAGCAACGGGA...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACAATAGAGTTTTCTGCTaGCCCAGTCTACAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHNRVFC*PSLQPD
Trigger: GTCTGGCTGTAGACTGGGTCAGCAGAAAACTCTATT...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATGTAGTATACAACACTaGGGCCTATGCCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPCSIQH*GLCPRG
Trigger: ACCCCGAGGGCATAGGCCTCAGTGTTGTATACTACA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCTCTCCACCTTGGGTTaGCCAGAGAGGCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSLSTLG*PERLPQ
Trigger: TTGGGGAAGCCTCTCTGGGCAACCCAAGGTGGAGAG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGCCACTGGCCAGGGATaGACTGTCCACCGTGGACAC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTATGQG*TVHRGH
Trigger: GTGTCCACGGTGGACAGTGCATCCCTGGCCAGTGGC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGATCCATGTTAGCACTTaGAATCTTGGCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQIHVST*NLGRNP
Trigger: GGGGTTCCTGCCAAGATTGCAAGTGCTAACATGGAT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTCTGTATTCCCAGGTTaGTTGCTGGCTTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQSVFPG*LLAWKT
Trigger: AGTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCGTCACTGTTGTCCCTaGAGTCGTCAAAACCATTGC +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGRHCCP*SRQNHC
Trigger: GCAATGGTTTTGACGACTGCAGGGACAACAGTGACG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGAGTCATCCACACCATTaGACAGCTGGTGGCCATAAA +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQSHPHH*TAGGHK
Trigger: TTTATGGCCACCAGCTGTGCAATGGTGTGGATGACT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTGCCACAGCTTCCTTTTaGTCAGTGTCCATCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIATASF*SVSISA
Trigger: TGCAGAGATGGACACTGAGCAAAAGGAAGCTGTGGC...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTCACACCTGTACTCGATaGGAACACACTGACCATTGG +
Preference number: 4 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRHTCTR*EHTDHW
Trigger: CCAATGGTCAGTGTGTTCCCATCGAGTACAGGTGTG...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGGCTGCAGTCGCCGTTaGGATGGGTGGTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTGCSRR*DGWSDC
Trigger: GCAGTCAGACCACCCATCCCAACGGCGACTGCAGCC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGCACTGAAACTCATCTaGGTGGCACATACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPALKLI*VAHTRR
Trigger: CCTCCTGGTATGTGCCACCCAGATGAGTTTCAGTGC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACCGATATGGGGACCATaGCATCGTTGCTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPPIWGP*HRCSSP
Trigger: AGGTGAAGAGCAACGATGCCATGGTCCCCATATCGG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAAGAACATTTCGTCCTTaGCCAGCCACTGGCACCATG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPRTFRP*PATGTM
Trigger: CATGGTGCCAGTGGCTGGCCAAGGACGAAATGTTCT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGATGCCATAAGGAGTTaGGTAACGACTGCCATAACG +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQDAIRS*VTTAIT
Trigger: CGTTATGGCAGTCGTTACCCAACTCCTTATGGCATC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTACAGCGATAATGGTATaGCACACATCGCCCATTGGC +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGTAIMV*HTSPIG
Trigger: GCCAATGGGCGATGTGTGCCATACCATTATCGCTGT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTACATTCTCACACTTCTaGCTACAGAGCTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGTFSHF*LQSWGV
Trigger: GACACCCCAGCTCTGTAGCCAGAAGTGTGAGAATGT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAACAGGAACTGCGTGCTaGAGCACATGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPTGTAC*STWAYR
Trigger: TCTGTATGCCCATGTGCTCCAGCACGCAGTTCCTGT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGCATTGCACAAAGCCTaGGGGCTCGTGCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSALHKA*GLVQLP
Trigger: TGGCAACTGCACGAGCCCCCAGGCTTTGTGCAATGC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CAA 72 bp AGTGTGGGACGTGACATGGCAGATACAGATGTTGACTaGGCAATTAGGGTCACAGCTGGGGTTAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: SVGRDMADTDVD*AIRVTAGVRRQ
Trigger: CTGTCTTCTAACCCCAGCTGTGACCCTAATTGCCAAGTCAACATCTGTATCTGCCATGTCACGTCCCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCATCGGGGCAGTCACTaGCATGGTCACACCTGTACT +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSHRGSH*HGHTCT
Trigger: AGTACAGGTGTGACCATGTCAGTGACTGCCCCGATG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTGTGATTGTCGCAGGTaGAGGAGGTGGGCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTCDCRR*RRWAGK
Trigger: CTTGCCCGCCCACCTCCTTCACCTGCGACAATCACA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTATCACACCTCCAGGATaGAGGGATACAGTATCCGTT +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGITPPG*RDTVSV
Trigger: AACGGATACTGTATCCCTGCATCCTGGAGGTGTGAT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGTCTGTGAACTTGTTTaGCTTCATCACCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQVCELV*LHHRHL
Trigger: AAGATGGCGGTGATGAAGGCAAACAAGTTCACAGAC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCATCACTCATGTCCCTaGAATCATTGTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGHHSCP*NHCPHH
Trigger: GTGATGGGGACAATGATTGCAGGGACATGAGTGATG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTATTCCCAGGTTGCTTaGTGGCTTGGAAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQYSQVA*WLGRLF
Trigger: GAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGAATA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATTGCTACACTGCTGCTaGTGGGTCTTGACAACTGTG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPLLHCC*WVLTTV
Trigger: CACAGTTGTCAAGACCCAGCAGCAGCAGTGTAGCAA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCCACTGCCACATTCTTaGCCACTGACTGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLPLPHS*PLTGAR
Trigger: CCTGGCGCCAGTCAGTGGCCAAGAATGTGGCAGTGG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTGAACAATCCTTATCCTaGTCACACACCCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: WLKLIKELRMTLNSHRPREQSLS*SHTQEL
Trigger: TAGCTCCTGGGTGTGTGACCAGGATAAGGATTGTTC...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCGCTGGCTTGAGCACGTaGTCCCAGGGCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGAGLST*SQGNFA
Trigger: AGCAAAATTGCCCTGGGACCACGTGCTCAAGCCAGC...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTTCATCACCAGAATCCTaGCAATCATCGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRSSPES*QSSSPS
Trigger: TGATGGGGACGATGATTGCCAGGATTCTGGTGATGA...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGAGTATCGTCCACTTGTaGCATTGTTCTCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQSIVHL*HCSHPL
Trigger: GAGAGGATGAGAACAATGCCACAAGTGGACGATACT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCTGGAAGTTTGGAACTaGGAAGCAGAAATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGLEVWN*EAEMAA
Trigger: TGCAGCCATTTCTGCTTCCCAGTTCCAAACTTCCAG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACACCCGCTGGAAGTTTaGAACTGGGAAGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPHPLEV*NWEAEM
Trigger: CATTTCTGCTTCCCAGTTCCAAACTTCCAGCGGGTG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCACATACCAGGAGGCCTaGTCGGACAGCCCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTTYQEA*SDSPPH
Trigger: ATGAGGCGGGCTGTCCGACCAGGCCTCCTGGTATGT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTTCCAATGTATATTCTaGGTCACAAGCGCACCGGAA +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQFQCIF*VTSAPE
Trigger: TTCCGGTGCGCTTGTGACCCAGAATATACATTGGAA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCGGTTGCCTGGAGGGATaGATGGCAATTATTCCGAGC +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSGCLEG*MAIIPS
Trigger: GCTCGGAATAATTGCCATCCATCCCTCCAGGCAACC...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCGAAAGCAGGCAAAGATaGCTGCAAGTGGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSESRQR*LQVAEA
Trigger: TGCCTCTGCCACTTGCAGCCATCTTTGCCTGCTTTC...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTCTTATCACTGTTGGTaGGTCTGTATTCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQSYHCW*VCIPRL
Trigger: CAACCTGGGAATACAGACCCACCAACAGTGATAAGA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGATCTCTTATCACTGTTaGTGGGTCTGTATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQISYHC*WVCIPR
Trigger: CCTGGGAATACAGACCCACCAACAGTGATAAGAGAT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGGCTGGTGTTCACAATaGGGACCCGGAAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILGWCSQ*GPGSSL
Trigger: GAGGGAACTTCCGGGTCCCCATTGTGAACACCAGCC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACGTTAAGCCAAAGGAATaGAAGGCAGTGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHVKPKE*KAVLMT
Trigger: TGTCATCAGCACTGCCTTCCATTCCTTTGGCTTAAC...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATTTGCGAAGTCCGGCTaGCAAGTGATGGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILFAKSG*QVMGGQ
Trigger: CTGCCCTCCCATCACTTGCCAGCCGGACTTCGCAAA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGCATCCACACAGTGCTaGGCTAGCATTTTGCGTTGT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPASTQC*ASILRC
Trigger: ACAACGCAAAATGCTAGCCCAGCACTGTGTGGATGC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATTGCCATCTCGGCACTaGAACTGTCCCAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILLPSRH*NCPRRQ
Trigger: CTGCCGTCTGGGACAGTTCCAGTGCCGAGATGGCAA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCAGCTCCAGGGGAGGCTaGCTTTGGCTCTGGAACTAT +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSSSRGG*LWLWNY
Trigger: ATAGTTCCAGAGCCAAAGCCAGCCTCCCCTGGAGCT...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CAA 72 bp AACTCAGTGTGGGACGTGACATGGCAGATACAGATGTaGACTTGGCAATTAGGGTCACAGCTGGGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: NSVWDVTWQIQM*TWQLGSQLGLE
Trigger: TTCTAACCCCAGCTGTGACCCTAATTGCCAAGTCAACATCTGTATCTGCCATGTCACGTCCCACACTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATGGGCACTGCCACTGTaGGCTAGGACAGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILWALPL*ARTVKR
Trigger: CCTTTTCACTGTCCTAGCTCACAGTGGCAGTGCCCA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGTCCGTCCCGTGGTCTaGCCAATACAGTTTCCCACG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTVRPVV*PIQFPT
Trigger: CGTGGGAAACTGTATTGGTCAGACCACGGGACGGAC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGAGTAACCCCTATATTTaGGAGCAGGATAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQSNPYI*EQDSWR
Trigger: TCTCCAACTATCCTGCTCTCAAATATAGGGGTTACT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTCACATTTCCAATCCTaGGAGATACAACGCCCATTA +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQSHFQS*EIQRPL
Trigger: TAATGGGCGTTGTATCTCTCAGGATTGGAAATGTGA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTAAATGTAGGAGCCTATaGCATTCTCACACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIKCRSL*HSHTSG
Trigger: GCCAGAAGTGTGAGAATGTCATAGGCTCCTACATTT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCACTGTGTGTCGATGGTaGCCCTCCAAATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSTVCRW*PSKSEN
Trigger: GTTCTCTGATTTGGAGGGTCACCATCGACACACAGT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTACTCACATGGAACATTaGAGCACAGGTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGTHMEH*STGESP
Trigger: AGGAGATTCACCTGTGCTTCAATGTTCCATGTGAGT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGAATTGAGAGCCCTGTaGCAGCACAGTGTAGTATAC +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPELRAL*QHSVVY
Trigger: GTATACTACACTGTGCTGTCACAGGGCTCTCAATTC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTAGATCCATCGCTCCATaGTCTCATAATCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGRSIAP*SHNLCR
Trigger: CCTGCAAAGATTATGAGAGCATGGAGCGATGGATCT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCCCACGAGTTGTAGATaGAGTTTCCATTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGPTSCR*SFHCHR
Trigger: TCTGTGACAATGGAAACTGCATCTACAACTCGTGGG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCGGACCATGGCATCGTTaGTCTTCACCTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSGPWHR*SSPQDQ
Trigger: TTGATCCTGAGGTGAAGAGCAACGATGCCATGGTCC...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACCAGGGCCACAACATTaGCCAATCCTTGCAAAATCA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPPGPQH*PILAKS
Trigger: TGATTTTGCAAGGATTGGGCAATGTTGTGGCCCTGG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATTTGCATCCACACAGTaGTGGGCTAGCATTTTGCGT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPFASTQ*WASILR
Trigger: ACGCAAAATGCTAGCCCAGCACTGTGTGGATGCAAA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGACTCAATTTTAGGCTaGTTTCCCTGGTCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPDSILG*FPWSVQ
Trigger: CTGGACTGACCAGGGAAAGCAGCCTAAAATTGAGTC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGAACAATCCTTATCCTaGTCACACACCCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPEQSLS*SHTQEL
Trigger: TAGCTCCTGGGTGTGTGACCAGGATAAGGATTGTTC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCCACACCTGTACTCGATaGGAACACACTGACCATTGG +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSHTCTR*EHTDHW
Trigger: CCAATGGTCAGTGTGTTCCCATCGAGTACAGGTGTG...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCAGGCTCTCTCCACCTTaGGTTGCCCAGAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTRLSPP*VAQRGF
Trigger: GAAGCCTCTCTGGGCAACCCAAGGTGGAGAGAGCCT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGTCATCTGGTCAACATaGCCCAGTCTTTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPVIWST*PSLFLS
Trigger: AGACAGGAAAAGACTGGGCCATGTTGACCAGATGAC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCACGACGGTGAACGAGTaGGGCAGTTTTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSTTVNE*GSFAHH
Trigger: GTGATGAGCAAAACTGCCCCACTCGTTCACCGTCGT...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACCATCTTCACAGGTCTTaGTATCATTGGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHHLHRS*YHWQVG
Trigger: ACCAACTTGCCAATGATACCAAGACCTGTGAAGATG...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACCTGGCTGCAAAAGCCTaGAATATCACACTCATTTAC +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHLAAKA*NITLIY
Trigger: GTAAATGAGTGTGATATTCCAGGCTTTTGCAGCCAG...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGAGACCCCTCAGGTATaGGATGTTATCTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPETPQV*DVISED
Trigger: GTCTTCAGAGATAACATCCCATACCTGAGGGGTCTC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGGCAGGCAGATCTGCTaGCAAGCATTTGGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSGRQIC*QAFGLL
Trigger: CAACAACCCAAATGCTTGCCAGCAGATCTGCCTGCC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACCACAGTCATTTTCTTaGTCACAGACCCATCGAGAG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPPQSFS*SQTHRE
Trigger: CTCTCGATGGGTCTGTGACCAAGAAAATGACTGTGG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCTTCGAACATGGCAGCTaGGCAGTAGGTACCATTGGG +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSFEHGS*AVGTIG
Trigger: CCCAATGGTACCTACTGCCCAGCTGCCATGTTCGAA...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTTTTTACATTCGAACATaGCAGCTGGGCAGTAGGTAC +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIFYIRT*QLGSRY
Trigger: GTACCTACTGCCCAGCTGCCATGTTCGAATGTAAAA...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCACAGCTGTAGCCTCCTaGTCTCAGCAGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTTAVAS*SQQAEV
Trigger: CACCTCTGCCTGCTGAGACCAGGAGGCTACAGCTGT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTGAAAAACCCTGTCTCTaGGGAAAAACGAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: WLKLIKELRMTLNSHRPREKPCL*GKTKTG
Trigger: ACCAGTCTTCGTTTTTCCCCAGAGACAGGGTTTTTC...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR TCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACAAGATGGTACTGTGTTaGGCATCAAAGTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHKMVLC*ASKSIP
Trigger: TGGAATTGACTTTGATGCTCAACACAGTACCATCTT...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATTGTCGGTTCCGTTTTaGAAGGCACTCCAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPLSVPF*KALQVL
Trigger: TAAAACCTGGAGTGCCTTTCAAAACGGAACCGACAA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTCTCAACCCAATAGATaGACTGCTCTGAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGSQPNR*TALSHQ
Trigger: TTGATGACTCAGAGCAGTTCATCTATTGGGTTGAGA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCCTGGATGTCCAGGGTaGCAACCTCCAGATGTTCCA +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLPGCPG*QPPDVP
Trigger: TGGAACATCTGGAGGTTGTCACCCTGGACATCCAGG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGCATGGAAACGACTATaGAAGAGTTATATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQAWKRL*KSYMEN
Trigger: GTTCTCCATATAACTCTTTCATAGTCGTTTCCATGC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGTCTCCAGGTCCAGAGTaGGTCCATTGGGCCAAACCA +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLSPGPE*VHWAKP
Trigger: TGGTTTGGCCCAATGGACTCACTCTGGACCTGGAGA...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGTGGGTTCTGGGGTGTaGCATAGGTGCTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTVGSGV*HRCSCS
Trigger: TGAACAGGAGCACCTATGTCACACCCCAGAACCCAC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCTGGTGTAGTCAATGGTaGTGGCATTGGGCCATTCGA +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSWCSQW*WHWAIR
Trigger: TCGAATGGCCCAATGCCATCACCATTGACTACACCA...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTATCACATATCCAAAATaGCTGGATGCACACGTGGTT +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIITYPK*LDAHVV
Trigger: AACCACGTGTGCATCCAGTCATTTTGGATATGTGAT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCTTCCATTTTGTGCCCTaGGTTTCATCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSFHFVP*VSSAPG
Trigger: CCCTGGAGCTGATGAAACTCAGGGCACAAAATGGAA...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGATTTTGCTGTTCATCTaGACCATCGGAACAATCCTT +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQILLFI*TIGTIL
Trigger: AAGGATTGTTCCGATGGTGCAGATGAACAGCAAAAT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGTCCCAGGGCAATTTTaGTGTTCATCTGCACCATCG +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSVPGQF*CSSAPS
Trigger: CGATGGTGCAGATGAACAGCAAAATTGCCCTGGGAC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCACACTTGCCATTGTTaGAGGGAAAGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSHTCHC*RERKRS
Trigger: GCTCCTCTTCCTTTCCCTGCAACAATGGCAAGTGTG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCAACAGAGTAAGAGCGTaGGGATGGTGGAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSNRVRA*GWWRTK
Trigger: TTTGGTTCTCCACCATCCGCACGCTCTTACTCTGTT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTTCGGGGAAGATGGTTaGCTGGAGGGATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTFGEDG*LEGWMA
Trigger: TGCCATCCATCCCTCCAGGCAACCATCTTCCCCGAA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGCAGGCAAAGATGGCTaGAAGTGGCAGAGGCACATG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTAGKDG*KWQRHM
Trigger: CATGTGCCTCTGCCACTTGCAGCCATCTTTGCCTGC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCATGTCTAGGCTCCTGTaGAGAAAGCAGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSMSRLL*RKQAKM
Trigger: CATCTTTGCCTGCTTTCTGCACAGGAGCCTAGACAT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCACGGGCAGGCAGATCTaGTGGCAAGCATTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTTGRQI*WQAFGL
Trigger: CAACCCAAATGCTTGCCAGCAGATCTGCCTGCCCGT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACAATTCTTGCAATGTATaGATGATCACCCCAATCTGC +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHNSCNV*MITPIC
Trigger: GCAGATTGGGGTGATCATGCATACATTGCAAGAATT...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTGTAAGCAGCAGTCATaGATTCATGGATGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSCKQQS*IHGWAR
Trigger: ACGAGCCCATCCATGAATGCATGACTGCTGCTTACA...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGTCCAGCGGAGAGGGATaGAGTGGTGATTTCCACACC +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLSSGEG*SGDFHT
Trigger: GGTGTGGAAATCACCACTGCATCCCTCTCCGCTGGA...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCAGAAGCCAGAACACTaGGGTGCTCCCCATTCATCC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTQKPEH*GAPHSS
Trigger: GGATGAATGGGGAGCACCGCAGTGTTCTGGCTTCTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGCTGGCTTGAGCACGTaGTCCCAGGGCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTAGLST*SQGNFA
Trigger: AGCAAAATTGCCCTGGGACCACGTGCTCAAGCCAGC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTTCTCCACTGCCACATTaGAATTCTTTTTGCGAACAC +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLISPLPH*NSFCEH
Trigger: GTGTTCGCAAAAAGAATTCCAATGTGGCAGTGGAGA...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTATGAAAGAGTTATATaGAGAACAGGAGCGACCATC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQYERVI*RTGATI
Trigger: GATGGTCGCTCCTGTTCTCCATATAACTCTTTCATA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACAACAACGATATGCCTaGGCATATCCACTGAGACTT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPQQRYA*AYPLRL
Trigger: AAGTCTCAGTGGATATGCCCAGGCATATCGTTGTTG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACGGTTGCTTGCTGGCTTaGAAGACTTTTCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHGCLLA*KTFLKF
Trigger: AAATTTGAGAAAAGTCTTCCAAGCCAGCAAGCAACC...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGCCGGTGAGAGGGGCTaGACATGCTCATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTAGERG*TCSSKM
Trigger: CATCTTTGATGAGCATGTCCAGCCCCTCTCACCGGC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAAGCTCCGTTTGGACCTaGAGCACAGATATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILSSVWT*STDMAA
Trigger: TGCAGCCATATCTGTGCTCCAGGTCCAAACGGAGCT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCTGATTGAAGAATCCTaGCACTCATTAATGCCACAG +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGLIEES*HSLMPQ
Trigger: CTGTGGCATTAATGAGTGCCAGGATTCTTCAATCAG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGCACGTCTTAACCTGTaGCTTATGATGGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSARLNL*LMMVSW
Trigger: CCAGGAGACCATCATAAGCCACAGGTTAAGACGTGC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCCATTATCCGTCCTGTaGCTAAGAACACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSPLSVL*LRTQIC
Trigger: GCAGATCTGTGTTCTTAGTCACAGGACGGATAATGG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGACAGTTCTTTTCATCTaGTCCATCCGAACAATCATT +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQTVLFI*SIRTII
Trigger: AATGATTGTTCGGATGGATCAGATGAAAAGAACTGT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTGTGAGCTAGGACAGTaGAAAGGCTGGGTAGGACAG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTCELGQ*KGWVGQ
Trigger: CTGTCCTACCCAGCCTTTTCACTGTCCTAGCTCACA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCGCCTCTCACACAGTTaGCAGAATCATCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSRLSHS*QNHQKG
Trigger: ACCTTTCTGATGATTCTGTCAACTGTGTGAGAGGCG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGATAGATGAACTGCTCTaGGTCATCAAATTCAACATC +
Preference number: 4 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQIDELL*VIKFNI
Trigger: GATGTTGAATTTGATGACTCAGAGCAGTTCATCTAT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCGGTCTTCACTCTGTaGATTTCACCTGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSSVFTL*ISPGFS
Trigger: TGAGAATCCAGGTGAAATTCACAGAGTGAAGACCGA...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACACACAAAGGCATTGGTaGAATAAAGATTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHTQRHW*NKDFLL
Trigger: TAGCAGGAAATCTTTATTTCACCAATGCCTTTGTGT...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAACTCTCCAAAGACGGTaGTGCCATAAGGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILTLQRR*CHKELG
Trigger: ACCCAACTCCTTATGGCATCACCGTCTTTGGAGAGT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCCCCTGAGTACAGGTTaGCATAGGAAATCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLPLSTG*HRKSGH
Trigger: GTGGCCAGATTTCCTATGTCAACCTGTACTCAGGGG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGACAAGTGAAGGCTGTTaGTCGGCACGTGTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLTSEGC*SARVKG
Trigger: GCCTTTCACACGTGCCGATCAACAGCCTTCACTTGT...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGTCACAATGACTGATTaGAGAATCCTGGCACTCATT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPVTMTD*RILALI
Trigger: AATGAGTGCCAGGATTCTTCAATCAGTCATTGTGAC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCCAGTTGTGGTCACAATaGCTGATTGAAGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSQLWSQ*LIEESW
Trigger: CCAGGATTCTTCAATCAGTCATTGTGACCACAACTG...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTTGATGAGGCACAGGTaGGAACAGCCACCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTLMRHR*EQPPLL
Trigger: CAACAACGGTGGCTGTTCTCACCTGTGCCTCATCAA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTTGGCTTCACACCGGTaGTGTTCACAGAGAACACGG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTLASHR*CSQRTR
Trigger: CCGTGTTCTCTGTGAACATCACCGGTGTGAAGCCAA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCAGAGGGATGCAGTGGTaGTTTCCACACCGGAAATCC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTRGMQW*FPHRKS
Trigger: GGATTTCCGGTGTGGAAATCACCACTGCATCCCTCT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCACAGTGGTGCTCATCTaGATCCAGTTCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSTVVLI*IQFKAK
Trigger: TTTGGCTTTGAACTGGATGCAGATGAGCACCACTGT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATGCTCTCATAATCTTTaGAGGACGGAACCAATCACT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPCSHNL*RTEPIT
Trigger: AGTGATTGGTTCCGTCCTGCAAAGATTATGAGAGCA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGCAGGTGTTATTAAGTaGCCCACACTGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSAGVIK*PTLMLI
Trigger: GATGAGCATCAGTGTGGGGCACTTAATAACACCTGC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTAGTTTTGCTCATCACTaGCATCTAGACAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLISFAHH*HLDSHS
Trigger: AGAATGACTGTCTAGATGGCAGTGATGAGCAAAACT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACAGGATCAACAGCTATaGCAACCGGGAAACCAACAC +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILQDQQL*QPGNQH
Trigger: GTGTTGGTTTCCCGGTTGGCATAGCTGTTGATCCTG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACAAGGATTGCTACACTaGTGCTGCTGGGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILQGLLH*CCWVLT
Trigger: TGTCAAGACCCAGCAGCAGCAGTGTAGCAATCCTTG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTACATTGCCCAATCCTTaGAAAATCAGAGAGTATGAC +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGTLPNP*KIREYD
Trigger: GTCATACTCTCTGATTTTGCAAGGATTGGGCAATGT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACTCCACAGTCATCAATaGCGTCACATTTCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILLHSHQ*RHISSG
Trigger: TCCGCTGGAAATGTGACGGCATTGATGACTGTGGAG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCATCCAAACAGTCTCTaGTCCCATCACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLHPNSL*SHHTSR
Trigger: CCTGGAGGTGTGATGGGACCAGAGACTGTTTGGATG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCTGAACCGCAGGACCTaGGAGGACAGCCAATTTCAT +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLLNRRT*EDSQFH
Trigger: ATGAAATTGGCTGTCCTCCCAGGTCCTGCGGTTCAG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCTCATCACCAGAATCCTaGCAATCATCGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSSSPES*QSSSPS
Trigger: TGATGGGGACGATGATTGCCAGGATTCTGGTGATGA...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTCAAATTCCCCATATCTaGCAGTCATCGAAATCAATG +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIQIPHI*QSSKSM
Trigger: CATTGATTTCGATGACTGCCAGATATGGGGAATTTG...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTCAAATTCCCCATATCTaGCAGTCATCGAAATCAATG +
Preference number: 4 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRQIPHI*QSSKSM
Trigger: CATTGATTTCGATGACTGCCAGATATGGGGAATTTG...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCACCATGACATCTTCCTaGGTGGAGAGGGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTTMTSS*VERVNG
Trigger: CCCATTCACCCTCTCCACCCAGGAAGATGTCATGGT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCAACGGATGTGTCATCTaGTCAACATGGCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSNGCVI*STWPSL
Trigger: AAGACTGGGCCATGTTGACCAGATGACACATCCGTT...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCCACAGACCCACTCTTTaGGGATACACATGTGATTGT +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSHRPTL*GYTCDC
Trigger: ACAATCACATGTGTATCCCCAAAGAGTGGGTCTGTG...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGTATCATTGGCAAGTTaGTATCCTATTGGACACACG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPVSLAS*YPIGHT
Trigger: CGTGTGTCCAATAGGATACCAACTTGCCAATGATAC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTCGTCACGATGGATCCTaGCAATTATATCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIRHDGS*QLYLRN
Trigger: ATTCCTTAGATATAATTGCCAGGATCCATCGTGACG...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCAAGGCAAAGCAAAAGTaGGAACACCCACCATTGCTT +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSKAKQK*EHPPLL
Trigger: AAGCAATGGTGGGTGTTCCCACTTTTGCTTTGCCTT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCTACACTGCTGCTGCTaGGTCTTGACAACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLLHCCC*VLTTVE
Trigger: CTCCACAGTTGTCAAGACCCAGCAGCAGCAGTGTAG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAAATGCACCTCCTGTTTaGAGGTCTGCTGTTTATACA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPNAPPV*RSAVYT
Trigger: TGTATAAACAGCAGACCTCCAAACAGGAGGTGCATT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGAGCAGTCATCCACATaGTTACAGACAGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILEQSST*LQTVPI
Trigger: GATGGGGACTGTCTGTAACCATGTGGATGACTGCTC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACAGGAACAGTAGAAACTaGTTATGGTATCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHRNSRN*LWYLYS
Trigger: ACTGTACAGATACCATAACCAGTTTCTACTGTTCCT...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATTAGGCTGCTTTCCCTaGTCAGTCCAGAACATGAGC +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILLGCFP*SVQNMS
Trigger: GCTCATGTTCTGGACTGACCAGGGAAAGCAGCCTAA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCACAAACTTTATCCATTaGGATGCATCGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSTNFIH*DASSRP
Trigger: GGGTCTGGACGATGCATCTCAATGGATAAAGTTTGT...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGAGGCTTCCCCAATCTaGGAAAAACAAATAGCCCAC +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILEASPI*EKQIAH
Trigger: GTGGGCTATTTGTTTTTCTCAGATTGGGGAAGCCTC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGCTACCGTCTTCCTTTaGATTCCATCATATGTTACA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPATVFL*IPSYVT
Trigger: TGTAACATATGATGGAATTCAAAGGAAGACGGTAGC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGTCTTTTCCTGGACAATaGCTGTGCGCATGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLSFPGQ*LCAWCH
Trigger: ATGGCACCATGCGCACAGTCATTGTCCAGGAAAAGA...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGACCATGGCCTCTGAGTaGTCAGACAACTCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLTMASE*SDNSKL
Trigger: TAGCTTGGAGTTGTCTGATCACTCAGAGGCCATGGT...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTTGACTCTTAGCATCTaGCCAGTAAATATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSLTLSI*PVNMPS
Trigger: GGAAGGCATATTTACTGGTCAGATGCTAAGAGTCAA...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCGAGTGGGGCAGTTTTaGTCATCACTGCCATCTAGA +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTRVGQF*SSLPSR
Trigger: TCTAGATGGCAGTGATGAGCAAAACTGCCCCACTCG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTCGCTAGCAATGACCTaGCTTCGGTTCTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTSLAMT*LRFCPS
Trigger: TGATGGACAGAACCGAAGGCAGGTCATTGCTAGCGA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGAGTTGGGTAACGACTaGCATAACGAACCACTTGGG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTELGND*HNEPLG
Trigger: CCCAAGTGGTTCGTTATGGCAGTCGTTACCCAACTC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGGAGAGGGGCTGGACATaGTCATCAAAGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLERGWT*SSKMVT
Trigger: TGTGACCATCTTTGATGAGCATGTCCAGCCCCTCTC...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAACAGAAGGTATTGTTTaGATCCACACAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILTEGIV*IHTVLG
Trigger: GCCCAGCACTGTGTGGATGCAAACAATACCTTCTGT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCTACACTTTTCATTGTTaGCACACAGGAACTGCGTGC +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSYTFHC*HTGTAC
Trigger: GCACGCAGTTCCTGTGTGGCAACAATGAAAAGTGTA...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCATTGCTTAACTGGGTaGAGTTCTGTTCACATATTT +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGHCLTG*SSVHIF
Trigger: AAATATGTGAACAGAACTGCACCCAGTTAAGCAATG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCATTCATAACTTCCTTTaGTGTTTCGGCAGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSIHNFL*CFGSFG
Trigger: CCCAAAGCTGCCGAAACAGCAAAGGAAGTTATGAAT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCTCACAAACCCAGTTCTaGTTAATGCACTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSSQTQF*LMHWPL
Trigger: CAATGGCCAGTGCATTAACCAGAACTGGGTTTGTGA...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCAGTATCGTCCACTTGTaGCATTGTTCTCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGSIVHL*HCSHPL
Trigger: GAGAGGATGAGAACAATGCCACAAGTGGACGATACT...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACACAGCCAGATTCTCTaGAGCATCAATAGAAACATT +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPHSQIL*SINRNI
Trigger: AATGTTTCTATTGATGCTCCAGAGAATCTGGCTGTG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCACAGCGGAAGATACTaGGCACACACTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTHSGRY*AHTCHC
Trigger: ACAATGGCAAGTGTGTGCCCAGTATCTTCCGCTGTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCATGTTGACACAGTGCTaGCTGCAAAAGCCTGGAATA +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSMLTQC*LQKPGI
Trigger: TATTCCAGGCTTTTGCAGCCAGCACTGTGTCAACAT...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCAGTTCCCTCCCAGTGTaGCTCTTTCAATTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSSSLPV*LFQFWH
Trigger: ATGCCAAAATTGAAAGAGCCACACTGGGAGGGAACT...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCCTCCATTGCTTAACTaGGTGCAGTTCTGTTCACAT +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSPPLLN*VQFCSH
Trigger: ATGTGAACAGAACTGCACCCAGTTAAGCAATGGAGG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCCCAGTCGTAGTCAATaGCTTGGATATGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSPSRSQ*LGYVPL
Trigger: AAGAGGAACATATCCAAGCCATTGACTACGACTGGG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGGATTTTCAGATGCTGTaGCTTTGCAAGTCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLDFQML*LCKSAH
Trigger: ATGGGCGGACTTGCAAAGTCACAGCATCTGAAAATC...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGGACACGACCAGTGACTaGATCAAAATCCAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLDTTSD*IKIQSN
Trigger: GTTGCTCTGGATTTTGATTCAGTCACTGGTCGTGTC...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGCAGTTTTTCTCATCTaGGGTGTCATTGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILAVFLI*GVIVMA
Trigger: TGCCATGACAATGACACCTCAGATGAGAAAAACTGC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGTGTCCACTCGTACACTaGAAATGTTCAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLCPLVH*KCSGWH
Trigger: GTGCCATCCTGAACATTTTCAGTGTACGAGTGGACA...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTCAGTAAAGAACACGTaGTCCTCAAATAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGSVKNT*SSNKLI
Trigger: AATAAGCTTATTTGAGGAGCACGTGTTCTTTACTGA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAACCTATCCAGTCTACTaGAATCATTTCTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPTYPVY*NHFCQR
Trigger: TCTTTGACAGAAATGATTGCAGTAGACTGGATAGGT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACTGTCCAGTAAATGTTaGGACCTATCCAGTCTACTG +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILLSSKC*DLSSLL
Trigger: CAGTAGACTGGATAGGTCGCAACATTTACTGGACAG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGATACAGTTTCCCACGTaGAGGATCAACAGCTATGCC +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLIQFPT*RINSYA
Trigger: GGCATAGCTGTTGATCCTGCACGTGGGAAACTGTAT...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCAGCTGTTTAGAGAATaGCCACAAGTGTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLQLFRE*PQVSGS
Trigger: TGAGCCTGACACTTGTGGGCATTCTCTAAACAGCTG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATATTGGTTCCATCCATaGCAATTCTTGCAATGTATG +
Preference number: 4 (lower is better)
Translates to: TISSLERPKALSQLLSSPYWFHP*QFLQCM
Trigger: CATACATTGCAAGAATTGGCATGGATGGAACCAATA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATACATTACAACAGATTaGTTCCTCCCGTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILYITTD*FLPCHL
Trigger: CAAGTGGCACGGGAGGAACCAATCTGTTGTAATGTA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTGTTGCTACAGCCATTaGAAGAGTCAGCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTCCYSH*KSQQHC
Trigger: GCAATGCTGCTGACTCTTCCAATGGCTGTAGCAACA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGTCCCAGGTTGCTTGCTaGCTTGGAAGACTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLSQVAC*LGRLFS
Trigger: TGAGAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGA...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
3UTR CAA 72 bp TGGTATCTGTTTGGCACCCTACTTTATGAAGTAGGTTaGGTTTTAGTCAGTCAGCTCCAGAATTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WYLFGTLLYEVG*VLVSQLQNSSH
Trigger: GTGACTGGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCCAAACAGATACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACGGAAGTTTCTTCCATaGAGATCTCCAACTAGCAAA +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILRKFLP*RSPTSK
Trigger: TTTGCTAGTTGGAGATCTTCATGGAAGAAACTTCCG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAAAAAGACACGACCAGTaGCTGAATCAAAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILKRHDQ*LNQNPE
Trigger: CTCTGGATTTTGATTCAGTCACTGGTCGTGTCTTTT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTACGTTTGTCAGACATaGGTTTGTACCCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTYVCQT*VCTQED
Trigger: GTCTTCCTGGGTACAAACTCATGTCTGACAAACGTA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGGCTTGCCTACCTCCATaGCGAATTGTTCATTCATTG +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLACLPP*RIVHSL
Trigger: CAATGAATGAACAATTCGTCATGGAGGTAGGCAAGC...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCATTTTGCTGTTCATCTaGACCATCGGAACAATCCTT +
Preference number: 4 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGILLFI*TIGTIL
Trigger: AAGGATTGTTCCGATGGTGCAGATGAACAGCAAAAT...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR GCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGCAATTCCTCTAGGATaGCCCAAGTTTTCAGTTATG +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILAIPLG*PKFSVM
Trigger: CATAACTGAAAACTTGGGGCATCCTAGAGGAATTGC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCATTTTGCAACCTGTTTaGTGTGATGACTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSILQPV*CDDFFS
Trigger: GGAAAAGAAGTCATCACAGCAAACAGGTTGCAAAAT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCACCCACCATTGCTTTaGAAACAAGGGTTATTGTTA +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSHPPLL*KQGLLL
Trigger: TAACAATAACCCTTGTTTGCAAAGCAATGGTGGGTG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGGGGAACACCCACCATTaGTTTGCAAACAAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLGNTHH*FANKGY
Trigger: ATAACCCTTGTTTGCAAAGCAATGGTGGGTGTTCCC...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCAAATAGCCCACAGTTaGATCAAGGGCAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTQIAHS*IKGNSS
Trigger: AGAGGAATTGCCCTTGATCCAACTGTGGGCTATTTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCATCCTCCATTGAACTaGTCACAAGGATTGCTACAC +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLHPPLN*SQGLLH
Trigger: GTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCATTTTCAGAGGGTTTaGCAAGGCTGCTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLHFQRV*QGCLSL
Trigger: CAAGCTTAAGCAGCCTTGCCAAACCCTCTGAAAATG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATCTCAGAAGGATCTATaGACCTTCCATAGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILSQKDL*TFHSSG
Trigger: ACCAGAACTATGGAAGGTCCATAGATCCTTCTGAGA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAATCAGTACTGTCCTGTaGCTTCCATCAATTTTAGAG +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILISTVL*LPSILE
Trigger: CTCTAAAATTGATGGAAGTCACAGGACAGTACTGAT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCTATTTAAGGAATAGATaGGGAAATCTTCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSYLRNR*GNLLGK
Trigger: CTTCCCGAGAAGATTTCCTCATCTATTCCTTAAATA...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTTCTTCCAGATACTCTaGGAACTTCTCAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTFFQIL*ELLRGD
Trigger: ATCTCCTCTGAGAAGTTCTCAGAGTATCTGGAAGAA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAAGTCGAACTTCTTTTTaGAGCTTTAGCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILSRTSF*SFSRKR
Trigger: TCTCTTCCTGCTAAAGCTTCAAAAAGAAGTTCGACT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGCTAATCCATCTGGCTaGATTAAATATTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTANPSG*IKYFRP
Trigger: GGGCCTGAAATATTTAATGCAGCCAGATGGATTAGC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAAGATATTCCATTTTGTaGCCTGAGTTTCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILRYSIL*PEFHQL
Trigger: GAGCTGATGAAACTCAGGGCACAAAATGGAATATCT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGTTCCTTCACAAGGTTTaGGGTGTCTTTAAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLFLHKV*GVFKGV
Trigger: GACACCTTTAAAGACACCGCAAACCTTGTGAAGGAA...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCAGTATATCTTTTCCTaGACAATGACTGTGCGCATG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTQYIFS*TMTVRM
Trigger: CATGCGCACAGTCATTGTCCAGGAAAAGATATACTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCATCCATCTTCAGCCATaGAATTTATTGTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: MSTISSLERPKALSQLLSIHLQP*NLLSDL
Trigger: CAAATCAGACAATAAATTCCATGGCTGAAGATGGAT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGCAAGGTTTGTGTGTTaGTTTTCTACAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILARFVC*FSTVFF
Trigger: GAAGAACACTGTAGAAAACCAACACACAAACCTTGC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATGGAAGTACTGTCTTTaGCTGCATACATTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILWKYCL*LHTLGF
Trigger: AAAACCCAATGTATGCAGCCAAAGACAGTACTTCCA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCATCTCTGCATAGATTaGATTTTCGAAGTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSHLCID*IFEVRC
Trigger: ACAACGAACTTCGAAAATCCAATCTATGCAGAGATG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGCTTGGGTTTTCGTTTaGAGATATTCCATTTTGTGC +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTAWVFV*RYSILC
Trigger: GCACAAAATGGAATATCTTCAAACGAAAACCCAAGC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCTTATGATGGTCTCCTaGTTTGTCTTATTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSLMMVS*FVLFKN
Trigger: GTTTTTGAATAAGACAAACCAGGAGACCATCATAAG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR TCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGTTCCATGTTCCCAGTaGAGAGAATTTTTAAAGATG +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTVPCSQ*REFLKM
Trigger: CATCTTTAAAAATTCTCTTCACTGGGAACATGGAAC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCTAAACCATCAAGGTTaGTGTGCTCAATCTTATCAA +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLLNHQG*CAQSYQ
Trigger: TTGATAAGATTGAGCACAGCAACCTTGATGGTTTAG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR GCA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGAGTACTGTCTTTGGCTaGATACATTGGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLSTVFG*IHWVFK
Trigger: TTTGAAAACCCAATGTATGCAGCCAAAGACAGTACT...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CCA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCAGTAGAAACTGGTTATaGTATCTGTACAGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTSRNWL*YLYSCG
Trigger: ACCACAACTGTACAGATACCATAACCAGTTTCTACT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GCCGGGCCTGCAGGTCCGGCTGGCACAGTGCGAAGGGTCTTCATCTaGATTATCCAGGCAGTCGTCCACGGAGTCACACTGCCAGTACTC +
Preference number: 5 (lower is better)
Translates to: AGPAGPAGTVRRVFI*IIQAVVHGVTLPVL
Trigger: GAGTACTGGCAGTGTGACTCCGTGGACGACTGCCTGGATAATTCAGATGAAGACCCTTCGCACTGTGCCAGCCGGACCTGCAGGCCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp CATCGGCACAATCCTGGCGAGCATTGCACAAAGCCTGGGGGCTCGTaGAGTTGCCATCTCGGCACTGGAACTGTCCCAGACGGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: HRHNPGEHCTKPGGS*SCHLGTGTVPDGRS
Trigger: GCTTCTGCCGTCTGGGACAGTTCCAGTGCCGAGATGGCAACTGCACGAGCCCCCAGGCTTTGTGCAATGCTCGCCAGGATTGTGCCGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp TCTCATGGTGCAGTTCTGCAGCTCGTCGAGGGCATCCGCGCAGTCTaGGTCGCCGTCACAGACCCAGTGTTGTGGAATGCACCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SHGAVLQLVEGIRAV*VAVTDPVLWNAPPV
Trigger: AACAGGAGGTGCATTCCACAACACTGGGTCTGTGACGGCGACGCAGACTGCGCGGATGCCCTCGACGAGCTGCAGAACTGCACCATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CAGTCCTTGTCCCCATCACAGACATACAGTGGGCTGATACACCGGTaGTCAGGGCAGCGAAACTGGGTAGGGTGGCAGGTCCCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: QSLSPSQTYSGLIHR*SGQRNWVGWQVPEA
Trigger: AGCTTCGGGGACCTGCCACCCTACCCAGTTTCGCTGCCCTGACCACCGGTGTATCAGCCCACTGTATGTCTGTGATGGGGACAAGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp GGTGTTAGGGATGCAGGTACCATCTCCCTGGCACTGAAACTCATCTaGGTGGCACATACCAGGAGGCCTGGTCGGACAGCCCGCCTCATC +
Preference number: 5 (lower is better)
Translates to: GVRDAGTISLALKLI*VAHTRRPGRTARLI
Trigger: GATGAGGCGGGCTGTCCGACCAGGCCTCCTGGTATGTGCCACCCAGATGAGTTTCAGTGCCAGGGAGATGGTACCTGCATCCCTAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp GCATTGCACAAAGCCTGGGGGCTCGTGCAGTTGCCATCTCGGCACTaGAACTGTCCCAGACGGCAGAAGCGGTGTGGACACAGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: ALHKAWGLVQLPSRH*NCPRRQKRCGHRSD
Trigger: ATCAGACCTGTGTCCACACCGCTTCTGCCGTCTGGGACAGTTCCAGTGCCGAGATGGCAACTGCACGAGCCCCCAGGCTTTGTGCAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GGAACACAGCCGTTGTGTTCATCCGAGCCCTGGATACAGTCCGGGTaGCCATCACACTCCCAGGTGTTAGGGATGCAGGTACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: GTQPLCSSEPWIQSG*PSHSQVLGMQVPSP
Trigger: GGGAGATGGTACCTGCATCCCTAACACCTGGGAGTGTGATGGGCACCCGGACTGTATCCAGGGCTCGGATGAACACAACGGCTGTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 90 bp GGTGACACGGCACCGATTCACAGCCTTGCTCGTCACTGTTGTCCCTaGAGTCGTCAAAACCATTGCACACTGCCCACTGCGGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: GDTAPIHSLARHCCP*SRQNHCTLPTAGCS
Trigger: GCTGCATCCCGCAGTGGGCAGTGTGCAATGGTTTTGACGACTGCAGGGACAACAGTGACGAGCAAGGCTGTGAATCGGTGCCGTGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp ACTTGCCATTGTTGCAGGGAAAGGAAGAGGAGCCACACTGCTGTGTaGGGGGCTCTCGGGCTGGGTCTCCCTCACAAGTCATTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: TCHCCRERKRSHTAV*GALGLGLPHKSFGP
Trigger: GGGACCAAATGACTTGTGAGGGAGACCCAGCCCGAGAGCCCCCCACACAGCAGTGTGGCTCCTCTTCCTTTCCCTGCAACAATGGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp GGGGAGCAGGTCTTAGGAACACAGCCGTTGTGTTCATCCGAGCCCTaGATACAGTCCGGGTGCCCATCACACTCCCAGGTGTTAGGGATG +
Preference number: 5 (lower is better)
Translates to: GEQVLGTQPLCSSEP*IQSGCPSHSQVLGM
Trigger: CATCCCTAACACCTGGGAGTGTGATGGGCACCCGGACTGTATCCAGGGCTCGGATGAACACAACGGCTGTGTTCCTAAGACCTGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp GCTGAGCTTGAACCCACTGGCACAGGCGCAGGAGAACATTCCGCCTaGTACGGGCAGGCAGATCTGCTGGCAAGCATTTGGGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: AELEPTGTGAGEHSA*YGQADLLASIWVVA
Trigger: AGCAACAACCCAAATGCTTGCCAGCAGATCTGCCTGCCCGTACCAGGCGGAATGTTCTCCTGCGCCTGTGCCAGTGGGTTCAAGCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TCATCAGAGCCATCGGCACAATCCTGGCGAGCATTGCACAAAGCCTaGGGGCTCGTGCAGTTGCCATCTCGGCACTGGAACTGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SSEPSAQSWRALHKA*GLVQLPSRHWNCPR
Trigger: TCTGGGACAGTTCCAGTGCCGAGATGGCAACTGCACGAGCCCCCAGGCTTTGTGCAATGCTCGCCAGGATTGTGCCGATGGCTCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp AGTTACGAAGTCGGAGCCTTGGGGACAGGCACAGCTGTAGCCTCCTaGTCTCAGCAGGCAGAGGTGGCTACAGACCTGCTTGCAAGGGTT +
Preference number: 5 (lower is better)
Translates to: SYEVGALGTGTAVAS*SQQAEVATDLLARV
Trigger: AACCCTTGCAAGCAGGTCTGTAGCCACCTCTGCCTGCTGAGACCAGGAGGCTACAGCTGTGCCTGTCCCCAAGGCTCCGACTTCGTAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GGGCAGTCACTGACATGGTCACACCTGTACTCGATGGGAACACACTaGCCATTGGAGCACGTCAGCTGCTGGCTTGAGCACGTGGTCCCA +
Preference number: 5 (lower is better)
Translates to: GQSLTWSHLYSMGTH*PLEHVSCWLEHVVP
Trigger: TGGGACCACGTGCTCAAGCCAGCAGCTGACGTGCTCCAATGGTCAGTGTGTTCCCATCGAGTACAGGTGTGACCATGTCAGTGACTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 90 bp ATACAGTATCCGTTGTCACAGCGAAAATTCCCACTGCCACATTCTTaGCCACTGACTGGCGCCAGGCAGGCAGCGATCGCCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: IQYPLSQRKFPLPHS*PLTGARQAAIASSS
Trigger: GCTGCTGCTGGCGATCGCTGCCTGCCTGGCGCCAGTCAGTGGCCAAGAATGTGGCAGTGGGAATTTTCGCTGTGACAACGGATACTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 90 bp CTCCCTGGCACTGAAACTCATCTGGGTGGCACATACCAGGAGGCCTaGTCGGACAGCCCGCCTCATCAGAGTTGTCCTTGCAATCGTACA +
Preference number: 5 (lower is better)
Translates to: LPGTETHLGGTYQEA*SDSPPHQSCPCNRT
Trigger: TGTACGATTGCAAGGACAACTCTGATGAGGCGGGCTGTCCGACCAGGCCTCCTGGTATGTGCCACCCAGATGAGTTTCAGTGCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp GGAGCTAGGGATGCAGGTGCCTTCGGCAGGACACAGGAAAAAGCCTaGACCGCAGGACCTGGGAGGACAGCCAATTTCATCAGTGTCATC +
Preference number: 5 (lower is better)
Translates to: GARDAGAFGRTQEKA*TAGPGRTANFISVI
Trigger: GATGACACTGATGAAATTGGCTGTCCTCCCAGGTCCTGCGGTTCAGGCTTTTTCCTGTGTCCTGCCGAAGGCACCTGCATCCCTAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS TCA 90 bp TGCGTGCTGGAGCACATGGGCATACAGAGTGTCCTGTCTCGAAGCTaGACGGTCTGGAAGTCATCGGGACACTCGCAGGTGAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: CVLEHMGIQSVLSRS*TVWKSSGHSQVNPL
Trigger: GAGAGGATTCACCTGCGAGTGTCCCGATGACTTCCAGACCGTTCAGCTTCGAGACAGGACACTCTGTATGCCCATGTGCTCCAGCACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GCACAGGCGCAGGAGAACATTCCGCCTGGTACGGGCAGGCAGATCTaGTGGCAAGCATTTGGGTTGTTGCTACAGCCATTGGAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: AQAQENIPPGTGRQI*WQAFGLLLQPLEES
Trigger: TGACTCTTCCAATGGCTGTAGCAACAACCCAAATGCTTGCCAGCAGATCTGCCTGCCCGTACCAGGCGGAATGTTCTCCTGCGCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GGTCTGGAAGTCATCGGGACACTCGCAGGTGAATCCTCTCCCTCCTaGTTTGATGAGGCACAGGTGAGAACAGCCACCGTTGTTGGTAGC +
Preference number: 5 (lower is better)
Translates to: GLEVIGTLAGESSPS*FDEAQVRTATVVGS
Trigger: GCTACCAACAACGGTGGCTGTTCTCACCTGTGCCTCATCAAAGCAGGAGGGAGAGGATTCACCTGCGAGTGTCCCGATGACTTCCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp TATCCAGGCAGTCGTCCACGGAGTCACACTGCCAGTACTCAGGGATaGAACGCTTGTTGGCACACTGCCACTCATTGGCTTCACACCGGT +
Preference number: 5 (lower is better)
Translates to: YPGSRPRSHTASTQG*NACWHTATHWLHTG
Trigger: ACCGGTGTGAAGCCAATGAGTGGCAGTGTGCCAACAAGCGTTGCATCCCTGAGTACTGGCAGTGTGACTCCGTGGACGACTGCCTGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GCAAAGATGGCTGCAAGTGGCAGAGGCACATGGATTCGGGGAAGATaGTTGCCTGGAGGGATGGATGGCAATTATTCCGAGCGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: AKMAASGRGTWIRGR*LPGGMDGNYSERLG
Trigger: CCCCAACCGCTCGGAATAATTGCCATCCATCCCTCCAGGCAACCATCTTCCCCGAATCCATGTGCCTCTGCCACTTGCAGCCATCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTACGTCAGCTGCTGGCTaGAGCACGTGGTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLITSAAG*STWSQG
Trigger: GCCCTGGGACCACGTGCTCAAGCCAGCAGCTGACGT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp TGGCTCAAACTTATTAAGGAGTTGAGGATGACCTTGAACTCCCACCGCCCACGTACGTCAGCTGCTGGCTaGAGCACGTGGTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: WLKLIKELRMTLNSHRPRTSAAG*STWSQG
Trigger: GCCCTGGGACCACGTGCTCAAGCCAGCAGCTGACGT...ACGTGGGCGGTGGGAGTTCAAGGTCATCCTCAACTCCTTAATAAGTTTGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS TCA 90 bp GGCGCTCAGATTGACACAGATGCTGTAGCCTGGGCACTGCCACTGTaGGCTAGGACAGTGAAAAGGCTGGGTAGGACAGTCCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: GAQIDTDAVAWALPL*ARTVKRLGRTVLLI
Trigger: GATGAGAAGGACTGTCCTACCCAGCCTTTTCACTGTCCTAGCTCACAGTGGCAGTGCCCAGGCTACAGCATCTGTGTCAATCTGAGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp ACACATCGCCCATTGGCACAAGTGAAGGCTGTTGATCGGCACGTGTaGAAGGCACAGACTGTGGGCAGCTCATCACTGCCATCACCACAG +
Preference number: 5 (lower is better)
Translates to: THRPLAQVKAVDRHV*KAQTVGSSSLPSPQ
Trigger: CTGTGGTGATGGCAGTGATGAGCTGCCCACAGTCTGTGCCTTTCACACGTGCCGATCAACAGCCTTCACTTGTGCCAATGGGCGATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp CTGCATCCTCCATTGAACTGGTCACAAGGATTGCTACACTGCTGCTaGTGGGTCTTGACAACTGTGGAGATGCCACTAGGCTGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LHPPLNWSQGLLHCC*WVLTTVEMPLGWVG
Trigger: GCCCACCCAGCCTAGTGGCATCTCCACAGTTGTCAAGACCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp CTGTGTCCACCACACAGTACTTGTTATCGTTGGCCAGATACCAGCTaGCTTCGTGTGGACACTGGCACTCAGCTCCGTTTGGACCTGGAG +
Preference number: 5 (lower is better)
Translates to: LCPPHSTCYRWPDTS*LRVDTGTQLRLDLE
Trigger: CTCCAGGTCCAAACGGAGCTGAGTGCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGATAACAAGTACTGTGTGGTGGACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GCAGGCAGATCTGCTGGCAAGCATTTGGGTTGTTGCTACAGCCATTaGAAGAGTCAGCAGCATTGCGATGGTGGTAAACCCGGAGACCCC +
Preference number: 5 (lower is better)
Translates to: AGRSAGKHLGCCYSH*KSQQHCDGGKPGDP
Trigger: GGGGTCTCCGGGTTTACCACCATCGCAATGCTGCTGACTCTTCCAATGGCTGTAGCAACAACCCAAATGCTTGCCAGCAGATCTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GATTACAGCGGGCACCTGTGTCCACCACACAGTACTTGTTATCGTTaGCCAGATACCAGCTGCCTTCGTGTGGACACTGGCACTCAGCTC +
Preference number: 5 (lower is better)
Translates to: DYSGHLCPPHSTCYR*PDTSCLRVDTGTQL
Trigger: GAGCTGAGTGCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGATAACAAGTACTGTGTGGTGGACACAGGTGCCCGCTGTAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CGCACTGGAACTCATTGCTGCGGCATGTGTGTGAGGCGCAGTAAATaGGGTTCTCGTCGCTCCCATCTCCACAGTCATTGTCTCCATCAC +
Preference number: 5 (lower is better)
Translates to: RTGTHCCGMCVRRSK*GSRRSHLHSHCLHH
Trigger: GTGATGGAGACAATGACTGTGGAGATGGGAGCGACGAGAACCCCATTTACTGCGCCTCACACACATGCCGCAGCAATGAGTTCCAGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GAGGGCATCCGCGCAGTCTGCGTCGCCGTCACAGACCCAGTGTTGTaGAATGCACCTCCTGTTTGGAGGTCTGCTGTTTATACAGGTAAA +
Preference number: 5 (lower is better)
Translates to: EGIRAVCVAVTDPVL*NAPPVWRSAVYTGK
Trigger: TTTACCTGTATAAACAGCAGACCTCCAAACAGGAGGTGCATTCCACAACACTGGGTCTGTGACGGCGACGCAGACTGCGCGGATGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GAGGTAGGGCTCAATGTTGCTATTCTGCCGGCAGCTCTTCCCATCTaGCTCACGGATGTAGCCAGGGGCACACTTACAAATGTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: EVGLNVAILPAALPI*LTDVARGTLTNVGA
Trigger: GGCTCCTACATTTGTAAGTGTGCCCCTGGCTACATCCGTGAGCCAGATGGGAAGAGCTGCCGGCAGAATAGCAACATTGAGCCCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CGTCCACGGAGTCACACTGCCAGTACTCAGGGATGCAACGCTTGTTaGCACACTGCCACTCATTGGCTTCACACCGGTGATGTTCACAGA +
Preference number: 5 (lower is better)
Translates to: RPRSHTASTQGCNAC*HTATHWLHTGDVHR
Trigger: TCTGTGAACATCACCGGTGTGAAGCCAATGAGTGGCAGTGTGCCAACAAGCGTTGCATCCCTGAGTACTGGCAGTGTGACTCCGTGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CTGAAACTCAGCGGAGCAGTGGCGCACGCCTTTAATCTCAGCACTCAGGAGGCAGGTCCCAGGGCAATTTaGCTGTTCATCTGCACCATC +
Preference number: 5 (lower is better)
Translates to: LKLSGAVAHAFNLSTQEAGPRAI*LFICTI
Trigger: GATGGTGCAGATGAACAGCAAAATTGCCCTGGGACC...TGCCTCCTGAGTGCTGAGATTAAAGGCGTGCGCCACTGCTCCGCTGAGTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS TCA 90 bp ACAGATTGGTTCCTCCCGTGCCACTTGTTGGCCTGCATGACCTGGTaGGTGCCGCGGTCAGTCCAGAACACAGAGTCTTCAAACAGAGTA +
Preference number: 5 (lower is better)
Translates to: TDWFLPCHLLACMTW*VPRSVQNTESSNRV
Trigger: TACTCTGTTTGAAGACTCTGTGTTCTGGACTGACCGCGGCACTCACCAGGTCATGCAGGCCAACAAGTGGCACGGGAGGAACCAATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp CACCGAATTGAGAGCCCTGTGACAGCACAGTGTAGTATACAACACTaGGGCCTATGCCCTCGGGGTCCCAGTCGTAGTCAATGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: HRIESPVTAQCSIQH*GLCPRGPSRSQWLG
Trigger: TCCAAGCCATTGACTACGACTGGGACCCCGAGGGCATAGGCCTCAGTGTTGTATACTACACTGTGCTGTCACAGGGCTCTCAATTCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GTCGGGAAGGTAGGCACGTTTGATTGCACCGAATTGAGAGCCCTGTaGCAGCACAGTGTAGTATACAACACTGAGGCCTATGCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: VGKVGTFDCTELRAL*QHSVVYNTEAYALG
Trigger: CCCGAGGGCATAGGCCTCAGTGTTGTATACTACACTGTGCTGTCACAGGGCTCTCAATTCGGTGCAATCAAACGTGCCTACCTTCCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp CAGAACATGAGCCCTAGCTTAGGATTCACAGCAATGGCGGCTGGTTaGTCCAGTTGGGTGGTGATCAGCCACTTCCGGTACCTTCCGTCA +
Preference number: 5 (lower is better)
Translates to: QNMSPSLGFTAMAAG*SSWVVISHFRYLPS
Trigger: TGACGGAAGGTACCGGAAGTGGCTGATCACCACCCAACTGGATCAACCAGCCGCCATTGCTGTGAATCCTAAGCTAGGGCTCATGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GAGCACGTCAGCTGCTGGCTTGAGCACGTGGTCCCAGGGCAATTTTaGTGTTCATCTGCACCATCGGAACAATCCTTATCCTGGTCACAC +
Preference number: 5 (lower is better)
Translates to: EHVSCWLEHVVPGQF*CSSAPSEQSLSWSH
Trigger: GTGTGACCAGGATAAGGATTGTTCCGATGGTGCAGATGAACAGCAAAATTGCCCTGGGACCACGTGCTCAAGCCAGCAGCTGACGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS GCA 90 bp CCGCGGTCAGTCCAGAACACAGAGTCTTCAAACAGAGTAAGAGCGTaGGGATGGTGGAGAACCAAATCGCTAGCAATGACCTGCCTTCGG +
Preference number: 5 (lower is better)
Translates to: PRSVQNTESSNRVRA*GWWRTKSLAMTCLR
Trigger: CCGAAGGCAGGTCATTGCTAGCGATTTGGTTCTCCACCATCCGCACGCTCTTACTCTGTTTGAAGACTCTGTGTTCTGGACTGACCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GGGTCTTCATCTGAATTATCCAGGCAGTCGTCCACGGAGTCACACTaGCAGTACTCAGGGATGCAACGCTTGTTGGCACACTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: GSSSELSRQSSTESH*QYSGMQRLLAHCHS
Trigger: TGAGTGGCAGTGTGCCAACAAGCGTTGCATCCCTGAGTACTGGCAGTGTGACTCCGTGGACGACTGCCTGGATAATTCAGATGAAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp AGACCATTTGGCCAGCCAAGGTTCGCAGAAGCCAGAACACTGCGGTaGTCCCCATTCATCCAGGCAGACTCAATTTTAGGCTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: RPFGQPRFAEARTLR*SPFIQADSILGCFP
Trigger: GGGAAAGCAGCCTAAAATTGAGTCTGCCTGGATGAATGGGGAGCACCGCAGTGTTCTGGCTTCTGCGAACCTTGGCTGGCCAAATGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp AGGTGCCTTCGGCAGGACACAGGAAAAAGCCTGAACCGCAGGACCTaGGAGGACAGCCAATTTCATCAGTGTCATCCAAACAGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: RCLRQDTGKSLNRRT*EDSQFHQCHPNSLW
Trigger: CCAGAGACTGTTTGGATGACACTGATGAAATTGGCTGTCCTCCCAGGTCCTGCGGTTCAGGCTTTTTCCTGTGTCCTGCCGAAGGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 90 bp GTGGCAGAGGCACATGGATTCGGGGAAGATGGTTGCCTGGAGGGATaGATGGCAATTATTCCGAGCGGTTGGGGAACGCTGTACATTACA +
Preference number: 5 (lower is better)
Translates to: VAEAHGFGEDGCLEG*MAIIPSGWGTLYIT
Trigger: TGTAATGTACAGCGTTCCCCAACCGCTCGGAATAATTGCCATCCATCCCTCCAGGCAACCATCTTCCCCGAATCCATGTGCCTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CAGAAGCATCCAGACAGTCTGCTCTCCCATCGCATGCCAACGCCTTaGGCACACAGTGTCCACTCGTACACTGAAAATGTTCAGGATGGC +
Preference number: 5 (lower is better)
Translates to: QKHPDSLLSHRMPTP*AHSVHSYTENVQDG
Trigger: GCCATCCTGAACATTTTCAGTGTACGAGTGGACACTGTGTGCCCAAGGCGTTGGCATGCGATGGGAGAGCAGACTGTCTGGATGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CTGAAACTCAGCGGAGCAGTGGCGCACGCCTTTAATCTCAGCACTCAGGAGGCATTAATGCACTGGCCATaGGAGCAAGTGAACTGGTGG +
Preference number: 5 (lower is better)
Translates to: LKLSGAVAHAFNLSTQEALMHWP*EQVNWW
Trigger: CCACCAGTTCACTTGCTCCAATGGCCAGTGCATTAA...TGCCTCCTGAGTGCTGAGATTAAAGGCGTGCGCCACTGCTCCGCTGAGTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CAA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACCAGGGGAGGCTGGCTTaGGCTCTGGAACTATCTCAG +
Preference number: 5 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHQGRLA*ALELSQ
Trigger: CTGAGATAGTTCCAGAGCCAAAGCCAGCCTCCCCTG...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp ACCCCAATTTGGTCGTTACCAGGTCTTTCCGATTGCTACCATCCATaGAGGCTCTCTCCACCTTGGGTTGCCCAGAGAGGCTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: TPIWSLPGLSDCYHP*RLSPPWVAQRGFPN
Trigger: ATTGGGGAAGCCTCTCTGGGCAACCCAAGGTGGAGAGAGCCTTCATGGATGGTAGCAATCGGAAAGACCTGGTAACGACCAAATTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp CGGTCTGGAGGTCAGCATCGTACGCTTTCACGTGCATTATGCTGCTaGTGCCACGTCGAACAACGGTCATATCACCACCATCAGACTTCC +
Preference number: 5 (lower is better)
Translates to: RSGGQHRTLSRALCC*CHVEQRSYHHHQTS
Trigger: GGAAGTCTGATGGTGGTGATATGACCGTTGTTCGACGTGGCATCAGCAGCATAATGCACGTGAAAGCGTACGATGCTGACCTCCAGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp CAATCATTGTCTGTGTCACAGACCCACTCTTTGGGGATACACATGTaGTTGTCGCAGGTGAAGGAGGTGGGCGGGCAAGTAGACGACGGT +
Preference number: 5 (lower is better)
Translates to: QSLSVSQTHSLGIHM*LSQVKEVGGQVDDG
Trigger: ACCGTCGTCTACTTGCCCGCCCACCTCCTTCACCTGCGACAATCACATGTGTATCCCCAAAGAGTGGGTCTGTGACACAGACAATGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp ACATTACAACAGATTGGTTCCTCCCGTGCCACTTGTTGGCCTGCATaGCCTGGTGAGTGCCGCGGTCAGTCCAGAACACAGAGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: TLQQIGSSRATCWPA*PGECRGQSRTQSLQ
Trigger: TTGAAGACTCTGTGTTCTGGACTGACCGCGGCACTCACCAGGTCATGCAGGCCAACAAGTGGCACGGGAGGAACCAATCTGTTGTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp ATGCAGAACATTTCGTCCTTGGCCAGCCACTGGCACCATGGCCTCTaGGTGATCAGACAACTCCAAGCTAAAGCCTCTAACTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MQNISSLASHWHHGL*VIRQLQAKASNCRQ
Trigger: CTGCCTGCAGTTAGAGGCTTTAGCTTGGAGTTGTCTGATCACTCAGAGGCCATGGTGCCAGTGGCTGGCCAAGGACGAAATGTTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GCTCACGGATGTAGCCAGGGGCACACTTACAAATGTAGGAGCCTATaGCATTCTCACACTTCTGGCTACAGAGCTGGGGTGTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: AHGCSQGHTYKCRSL*HSHTSGYRAGVSPC
Trigger: GCAAGGAGACACCCCAGCTCTGTAGCCAGAAGTGTGAGAATGTCATAGGCTCCTACATTTGTAAGTGTGCCCCTGGCTACATCCGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp CACTCGCAGGTGAATCCTCTCCCTCCTGCTTTGATGAGGCACAGGTaGGAACAGCCACCGTTGTTGGTAGCACAGGGATTGCTCATAATC +
Preference number: 5 (lower is better)
Translates to: HSQVNPLPPALMRHR*EQPPLLVAQGLLII
Trigger: GATTATGAGCAATCCCTGTGCTACCAACAACGGTGGCTGTTCTCACCTGTGCCTCATCAAAGCAGGAGGGAGAGGATTCACCTGCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp CCATCGCATGCCAACGCCTTGGGCACACAGTGTCCACTCGTACACTaGAAATGTTCAGGATGGCACGTCTTCATCTCACAGTCCCGTTCA +
Preference number: 5 (lower is better)
Translates to: PSHANALGTQCPLVH*KCSGWHVFISQSRS
Trigger: TGAACGGGACTGTGAGATGAAGACGTGCCATCCTGAACATTTTCAGTGTACGAGTGGACACTGTGTGCCCAAGGCGTTGGCATGCGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GAACACACTGACCATTGGAGCACGTCAGCTGCTGGCTTGAGCACGTaGTCCCAGGGCAATTTTGCTGTTCATCTGCACCATCGGAACAAT +
Preference number: 5 (lower is better)
Translates to: EHTDHWSTSAAGLST*SQGNFAVHLHHRNN
Trigger: ATTGTTCCGATGGTGCAGATGAACAGCAAAATTGCCCTGGGACCACGTGCTCAAGCCAGCAGCTGACGTGCTCCAATGGTCAGTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 90 bp GAAGATGGTTGCCTGGAGGGATGGATGGCAATTATTCCGAGCGGTTaGGGAACGCTGTACATTACAACAGATTGGTTCCTCCCGTGCCAC +
Preference number: 5 (lower is better)
Translates to: EDGCLEGWMAIIPSG*GTLYITTDWFLPCH
Trigger: GTGGCACGGGAGGAACCAATCTGTTGTAATGTACAGCGTTCCCCAACCGCTCGGAATAATTGCCATCCATCCCTCCAGGCAACCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CAGAGGCACATGGATTCGGGGAAGATGGTTGCCTGGAGGGATGGATaGCAATTATTCCGAGCGGTTGGGGAACGCTGTACATTACAACAG +
Preference number: 5 (lower is better)
Translates to: QRHMDSGKMVAWRDG*QLFRAVGERCTLQQ
Trigger: CTGTTGTAATGTACAGCGTTCCCCAACCGCTCGGAATAATTGCCATCCATCCCTCCAGGCAACCATCTTCCCCGAATCCATGTGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CTGTGCAGAAAGCAGGCAAAGATGGCTGCAAGTGGCAGAGGCACATaGATTCGGGGAAGATGGTTGCCTGGAGGGATGGATGGCAATTAT +
Preference number: 5 (lower is better)
Translates to: LCRKQAKMAASGRGT*IRGRWLPGGMDGNY
Trigger: ATAATTGCCATCCATCCCTCCAGGCAACCATCTTCCCCGAATCCATGTGCCTCTGCCACTTGCAGCCATCTTTGCCTGCTTTCTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GCCTCTAACTGCAGGCAGCATGGAAACGACTATGAAAGAGTTATATaGAGAACAGGAGCGACCATCGGGGCTGAGCTTGAACCCACTGGC +
Preference number: 5 (lower is better)
Translates to: ASNCRQHGNDYERVI*RTGATIGAELEPTG
Trigger: GCCAGTGGGTTCAAGCTCAGCCCCGATGGTCGCTCCTGTTCTCCATATAACTCTTTCATAGTCGTTTCCATGCTGCCTGCAGTTAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CATCCTCCATTGAACTGGTCACAAGGATTGCTACACTGCTGCTGCTaGGTCTTGACAACTGTGGAGATGCCACTAGGCTGGGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: HPPLNWSQGLLHCCC*VLTTVEMPLGWVGK
Trigger: TTTGCCCACCCAGCCTAGTGGCATCTCCACAGTTGTCAAGACCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TACTTGTTATCGTTGGCCAGATACCAGCTGCCTTCGTGTGGACACTaGCACTCAGCTCCGTTTGGACCTGGAGCACAGATATGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: YLLSLARYQLPSCGH*HSAPFGPGAQIWLH
Trigger: ATGCAGCCATATCTGTGCTCCAGGTCCAAACGGAGCTGAGTGCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGATAACAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CACACAGTACTTGTTATCGTTGGCCAGATACCAGCTGCCTTCGTGTaGACACTGGCACTCAGCTCCGTTTGGACCTGGAGCACAGATATG +
Preference number: 5 (lower is better)
Translates to: HTVLVIVGQIPAAFV*TLALSSVWTWSTDM
Trigger: CATATCTGTGCTCCAGGTCCAAACGGAGCTGAGTGCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGATAACAAGTACTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GCACAGGGATTGCTCATAATCGGCTGCCGGTATGGATGTAACACGTaGATGTCAAAGGGTTTGTGGGTTGTGTTCACCAGCACGACTCGC +
Preference number: 5 (lower is better)
Translates to: AQGLLIIGCRYGCNT*MSKGLWVVFTSTTR
Trigger: GCGAGTCGTGCTGGTGAACACAACCCACAAACCCTTTGACATCCACGTGTTACATCCATACCGGCAGCCGATTATGAGCAATCCCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GCCAGTACTCAGGGATGCAACGCTTGTTGGCACACTGCCACTCATTaGCTTCACACCGGTGATGTTCACAGAGAACACGGTCTTCATCAG +
Preference number: 5 (lower is better)
Translates to: ASTQGCNACWHTATH*LHTGDVHREHGLHQ
Trigger: CTGATGAAGACCGTGTTCTCTGTGAACATCACCGGTGTGAAGCCAATGAGTGGCAGTGTGCCAACAAGCGTTGCATCCCTGAGTACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CGTGGTTTTTACATTCGAACATGGCAGCTGGGCAGTAGGTACCATTaGGAAAGCGAGTCGGGCAAGCGGACTCATCAGAAGCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: RGFYIRTWQLGSRYH*ESESGKRTHQKHPD
Trigger: GTCTGGATGCTTCTGATGAGTCCGCTTGCCCGACTCGCTTTCCCAATGGTACCTACTGCCCAGCTGCCATGTTCGAATGTAAAAACCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CTGGTCTCAGCAGGCAGAGGTGGCTACAGACCTGCTTGCAAGGGTTaGACACTGACTGGTTGTATCTCAGTTGATGGAAGATGCGGACTT +
Preference number: 5 (lower is better)
Translates to: LVSAGRGGYRPACKG*TLTGCISVDGRCGL
Trigger: AAGTCCGCATCTTCCATCAACTGAGATACAACCAGTCAGTGTCCAACCCTTGCAAGCAGGTCTGTAGCCACCTCTGCCTGCTGAGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTATTCGGGGAAGATGGTaGCCTGGAGGGATGGATGGC +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGIRGRW*PGGMDG
Trigger: GCCATCCATCCCTCCAGGCAACCATCTTCCCCGAAT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTTCCAGAGTGAGTCCATaGGGCCAAACCAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLISRVSP*GQTRLV
Trigger: CACCAGCCTGGTTTGGCCCAATGGACTCACTCTGGA...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTGCTGCTGCTGGGTCTaGACAACTGTGGAGATGCCA +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQCCCWV*TTVEMP
Trigger: TGGCATCTCCACAGTTGTCAAGACCCAGCAGCAGCA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp AACGAGAGTCCACCCAGTAAACTCGCTTGGATACAAGATCCAGAGTaGTCCCAGCAGGCCACCCCAATTTGGTCGTTACCAGGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: NESPPSKLAWIQDPE*SQQATPIWSLPGLS
Trigger: GGAAAGACCTGGTAACGACCAAATTGGGGTGGCCTGCTGGGATCACTCTGGATCTTGTATCCAAGCGAGTTTACTGGGTGGACTCTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp AGTCAATACTTAAGCCACAGGGCCAGTATATCTTTTCCTGGACAATaGCTGTGCGCATGGTGCCATCCATGCTGGCCCGCTCAATGCGAG +
Preference number: 5 (lower is better)
Translates to: SQYLSHRASISFPGQ*LCAWCHPCWPAQCE
Trigger: CTCGCATTGAGCGGGCCAGCATGGATGGCACCATGCGCACAGTCATTGTCCAGGAAAAGATATACTGGCCCTGTGGCTTAAGTATTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp ATAATGGTATGGCACACATCGCCCATTGGCACAAGTGAAGGCTGTTaGTCGGCACGTGTGAAAGGCACAGACTGTGGGCAGCTCATCACT +
Preference number: 5 (lower is better)
Translates to: IMVWHTSPIGTSEGC*SARVKGTDCGQLIT
Trigger: AGTGATGAGCTGCCCACAGTCTGTGCCTTTCACACGTGCCGATCAACAGCCTTCACTTGTGCCAATGGGCGATGTGTGCCATACCATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp AATCACAGCGATAATGGTATGGCACACATCGCCCATTGGCACAAGTaGAGGCTGTTGATCGGCACGTGTGAAAGGCACAGACTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: NHSDNGMAHIAHWHK*RLLIGTCERHRLWA
Trigger: TGCCCACAGTCTGTGCCTTTCACACGTGCCGATCAACAGCCTTCACTTGTGCCAATGGGCGATGTGTGCCATACCATTATCGCTGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp TGTCTCCACAGTCATTTTCTTGGTCACAGACCCATCGAGAGGGGATaGATTGCTGATCAGCACATCGAAACTCGCTCTCTGTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: CLHSHFLGHRPIERG*IADQHIETRSLCTP
Trigger: GGGAGTGCACAGAGAGCGAGTTTCGATGTGCTGATCAGCAATGCATCCCCTCTCGATGGGTCTGTGACCAAGAAAATGACTGTGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp CCAGATACTCTGAGAACTTCTCAGAGGAGATATTGTACTTCCGGATaGGGACGTTCTCAGGCAGGAGCAAGAGAGGAGGGCTTCCATCAG +
Preference number: 5 (lower is better)
Translates to: PDTLRTSQRRYCTSG*GRSQAGAREEGFHQ
Trigger: CTGATGGAAGCCCTCCTCTCTTGCTCCTGCCTGAGAACGTCCGCATCCGGAAGTACAATATCTCCTCTGAGAAGTTCTCAGAGTATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp ACACTGCGGTGCTCCCCATTCATCCAGGCAGACTCAATTTTAGGCTaGTTTCCCTGGTCAGTCCAGAACATGAGCCCTAGCTTAGGATTC +
Preference number: 5 (lower is better)
Translates to: TLRCSPFIQADSILG*FPWSVQNMSPSLGF
Trigger: GAATCCTAAGCTAGGGCTCATGTTCTGGACTGACCAGGGAAAGCAGCCTAAAATTGAGTCTGCCTGGATGAATGGGGAGCACCGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp CGGTCCCTGCACTGCCAGGCCCACTTTGGAAGTACTGTCTTTGGCTaGATACATTGGGTTTTCAAATATCACAGGCTGCTTGCCTACCTC +
Preference number: 5 (lower is better)
Translates to: RSLHCQAHFGSTVFG*IHWVFKYHRLLAYL
Trigger: GAGGTAGGCAAGCAGCCTGTGATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGTGCAGGGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp TCCACATTTTCTGGTACAGTCACCTGTGAGCTTACTGACGGTCCCTaGACTGCCAGGCCCACTTTGGAAGTACTGTCTTTGGCTGCATAC +
Preference number: 5 (lower is better)
Translates to: STFSGTVTCELTDGP*TARPTLEVLSLAAY
Trigger: GTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGTGCAGGGACCGTCAGTAAGCTCACAGGTGACTGTACCAGAAAATGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp ACAAAGAAGGAAGGACTCCCTGTAACAGGAACCATGACATCTTCCTaGGTGGAGAGGGTGAATGGGATCCCACGCACAGCCGTTTGTGAT +
Preference number: 5 (lower is better)
Translates to: TKKEGLPVTGTMTSS*VERVNGIPRTAVCD
Trigger: ATCACAAACGGCTGTGCGTGGGATCCCATTCACCCTCTCCACCCAGGAAGATGTCATGGTTCCTGTTACAGGGAGTCCTTCCTTCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp CACTGTTGTCATGGCAATCATCCACTCCATCACAGCGGAAGATACTaGGCACACACTTGCCATTGTTGCAGGGAAAGGAAGAGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: HCCHGNHPLHHSGRY*AHTCHCCRERKRSH
Trigger: GTGGCTCCTCTTCCTTTCCCTGCAACAATGGCAAGTGTGTGCCCAGTATCTTCCGCTGTGATGGAGTGGATGATTGCCATGACAACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp TTCTGTTTGTCACAGCGCCACTGGCCAGGGATGCACTGTCCACCGTaGACACAAGTAAAAGCCGAAGATGAGCAGGTGTTATTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: FCLSQRHWPGMHCPP*TQVKAEDEQVLLSA
Trigger: GGCACTTAATAACACCTGCTCATCTTCGGCTTTTACTTGTGTCCACGGTGGACAGTGCATCCCTGGCCAGTGGCGCTGTGACAAACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp ATGTTAGCACTTGCAATCTTGGCAGGAACCCCACTGTCCGTCCCGTaGTCTGACCAATACAGTTTCCCACGTGCAGGATCAACAGCTATG +
Preference number: 5 (lower is better)
Translates to: MLALAILAGTPLSVP*SDQYSFPRAGSTAM
Trigger: CATAGCTGTTGATCCTGCACGTGGGAAACTGTATTGGTCAGACCACGGGACGGACAGTGGGGTTCCTGCCAAGATTGCAAGTGCTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CCGTTTGGACCTGGAGCACAGATATGGCTGCATCCTCCATTGAACTaGTCACAAGGATTGCTACACTGCTGCTGCTGGGTCTTGACAACT +
Preference number: 5 (lower is better)
Translates to: PFGPGAQIWLHPPLN*SQGLLHCCCWVLTT
Trigger: AGTTGTCAAGACCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATGCAGCCATATCTGTGCTCCAGGTCCAAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGCACAGCCCCCATTGTaGTTTCCGCACGGATTGGTG +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPAQPPL*FPHGLV
Trigger: CACCAATCCGTGCGGAAACAACAATGGGGGCTGTGC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTTAGCACTTGCAATCTaGGCAGGAACCCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHLALAI*AGTPLS
Trigger: GGACAGTGGGGTTCCTGCCAAGATTGCAAGTGCTAA...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTGAACAGCCACCGTTGTaGGTAGCACAGGGATTGCTC +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIEQPPL*VAQGLL
Trigger: GAGCAATCCCTGTGCTACCAACAACGGTGGCTGTTC...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp CTCTCCTTCTGGACAGTCGGGAACTCCATCACAAACTTTATCCATTaGGATGCATCGTCCAGACCCAGGACACGCCCATTCTCTTGGGTA +
Preference number: 5 (lower is better)
Translates to: LSFWTVGNSITNFIH*DASSRPRTRPFSWV
Trigger: TACCCAAGAGAATGGGCGTGTCCTGGGTCTGGACGATGCATCTCAATGGATAAAGTTTGTGATGGAGTTCCCGACTGTCCAGAAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS TCA 90 bp GAAGGCTCTCTCCACCTTGGGTTGCCCAGAGAGGCTTCCCCAATCTaGGAAAAACAAATAGCCCACAGTTGGATCAAGGGCAATTCCTCT +
Preference number: 5 (lower is better)
Translates to: EGSLHLGLPREASPI*EKQIAHSWIKGNSS
Trigger: AGAGGAATTGCCCTTGATCCAACTGTGGGCTATTTGTTTTTCTCAGATTGGGGAAGCCTCTCTGGGCAACCCAAGGTGGAGAGAGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp AAGCCATTGGGCCACCCCAGACTAGTGTTGACTATGGGCATTAGGTaGGATCCATCGCTCCATGCTCTCATAATCTTTGCAGGACGGAAC +
Preference number: 5 (lower is better)
Translates to: KPLGHPRLVLTMGIR*DPSLHALIIFAGRN
Trigger: GTTCCGTCCTGCAAAGATTATGAGAGCATGGAGCGATGGATCTCACCTAATGCCCATAGTCAACACTAGTCTGGGGTGGCCCAATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp CGGTACCTGCTATTAATGCAAGAACTCCCGTCAGCACACTTGAACTaGGAGCTTGTGCAGTTTAACACACAGCCTGCCTCATCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: RYLLLMQELPSAHLN*ELVQFNTQPASSEP
Trigger: TGGCTCGGATGAGGCAGGCTGTGTGTTAAACTGCACAAGCTCTCAGTTCAAGTGTGCTGACGGGAGTTCTTGCATTAATAGCAGGTACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp AAAGGTGTCTTCTGTGGCAGTGTAGCCTGGAGTCGAACTTCTTTTTaGAGCTTTAGCAGGAAGAGAAGGAGATGGAGGGGGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: KGVFCGSVAWSRTSF*SFSRKRRRWRGSHS
Trigger: GCTGTGGCTCCCCCTCCATCTCCTTCTCTTCCTGCTAAAGCTTCAAAAAGAAGTTCGACTCCAGGCTACACTGCCACAGAAGACACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp ATCAGTGTCATCCAAACAGTCTCTGGTCCCATCACACCTCCAGGATaGAGGGATACAGTATCCGTTGTCACAGCGAAAATTCCCACTGCC +
Preference number: 5 (lower is better)
Translates to: ISVIQTVSGPITPPG*RDTVSVVTAKIPTA
Trigger: GGCAGTGGGAATTTTCGCTGTGACAACGGATACTGTATCCCTGCATCCTGGAGGTGTGATGGGACCAGAGACTGTTTGGATGACACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS GCA 90 bp TGTCCCTGCAATCATTGTCCCCATCACAGACCCACGAGTTGTAGATaGAGTTTCCATTGTCACAGAGGAAATGAGACGGGGAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: CPCNHCPHHRPTSCR*SFHCHRGNETGSRS
Trigger: AGACCTGCTCCCCGTCTCATTTCCTCTGTGACAATGGAAACTGCATCTACAACTCGTGGGTCTGTGATGGGGACAATGATTGCAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 90 bp TTCCACCAGATAGGGATACACTTTTCATTGTTGCCACACAGGAACTaGGTGCTGGAGCACATGGGCATACAGAGTGTCCTGTCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: FHQIGIHFSLLPHRN*VLEHMGIQSVLSRS
Trigger: GCTTCGAGACAGGACACTCTGTATGCCCATGTGCTCCAGCACGCAGTTCCTGTGTGGCAACAATGAAAAGTGTATCCCTATCTGGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp TTGCTCGTCACTGTTGTCCCTGCAGTCGTCAAAACCATTGCACACTaGCCACTGCGGGATGCAGCGGTAATTAGTTTTGCAGCTGAATTC +
Preference number: 5 (lower is better)
Translates to: LLVTVVPAVVKTIAH*PLRDAAVISFAAEF
Trigger: GAATTCAGCTGCAAAACTAATTACCGCTGCATCCCGCAGTGGGCAGTGTGCAATGGTTTTGACGACTGCAGGGACAACAGTGACGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp ACCTGGGAGGACAGCCAATTTCATCAGTGTCATCCAAACAGTCTCTaGTCCCATCACACCTCCAGGATGCAGGGATACAGTATCCGTTGT +
Preference number: 5 (lower is better)
Translates to: TWEDSQFHQCHPNSL*SHHTSRMQGYSIRC
Trigger: ACAACGGATACTGTATCCCTGCATCCTGGAGGTGTGATGGGACCAGAGACTGTTTGGATGACACTGATGAAATTGGCTGTCCTCCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 90 bp CGGCCCTGTCGGCTCTCACACTTCTGGTCACAAATTCCCCATATCTaGCAGTCATCGAAATCAATGCAAGTACGGCTGTCATTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RPCRLSHFWSQIPHI*QSSKSMQVRLSLLL
Trigger: CAACAGCAATGACAGCCGTACTTGCATTGATTTCGATGACTGCCAGATATGGGGAATTTGTGACCAGAAGTGTGAGAGCCGACAGGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 90 bp TACATCTTCACAGGTCTTGGTATCATTGGCAAGTTGGTATCCTATTaGACACACGCAGGTGGCTCCAAAGGGCCCTTGTATGCACCGGTG +
Preference number: 5 (lower is better)
Translates to: YIFTGLGIIGKLVSY*THAGGSKGPLYAPV
Trigger: CACCGGTGCATACAAGGGCCCTTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GGGTCACAAGCGCACCGGAAGGACCCTCTCATGTTGACACAGTGCTaGCTGCAAAAGCCTGGAATATCACACTCATTTACATCTTCACAG +
Preference number: 5 (lower is better)
Translates to: GSQAHRKDPLMLTQC*LQKPGISHSFTSSQ
Trigger: CTGTGAAGATGTAAATGAGTGTGATATTCCAGGCTTTTGCAGCCAGCACTGTGTCAACATGAGAGGGTCCTTCCGGTGCGCTTGTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TGCTGTGACTTTGCAAGTCCGCCCATCACTTTCCAATGTATATTCTaGGTCACAAGCGCACCGGAAGGACCCTCTCATGTTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: CCDFASPPITFQCIF*VTSAPEGPSHVDTV
Trigger: CACTGTGTCAACATGAGAGGGTCCTTCCGGTGCGCTTGTGACCCAGAATATACATTGGAAAGTGATGGGCGGACTTGCAAAGTCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GTCCAGAACACAGAGTCTTCAAACAGAGTAAGAGCGTGCGGATGGTaGAGAACCAAATCGCTAGCAATGACCTGCCTTCGGTTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: VQNTESSNRVRACGW*RTKSLAMTCLRFCP
Trigger: TGGACAGAACCGAAGGCAGGTCATTGCTAGCGATTTGGTTCTCCACCATCCGCACGCTCTTACTCTGTTTGAAGACTCTGTGTTCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GTCAGCAGCATTGCGATGGTGGTAAACCCGGAGACCCCTCAGGTATaGGATGTTATCTCTGAAGACGACTTTGTTACTCCCAGAGGACTT +
Preference number: 5 (lower is better)
Translates to: VSSIAMVVNPETPQV*DVISEDDFVTPRGL
Trigger: AAGTCCTCTGGGAGTAACAAAGTCGTCTTCAGAGATAACATCCCATACCTGAGGGGTCTCCGGGTTTACCACCATCGCAATGCTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CACCCAAATGATCGACTCTCCAAAGACGGTGATGCCATAAGGAGTTaGGTAACGACTGCCATAACGAACCACTTGGGATTCTCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: HPNDRLSKDGDAIRS*VTTAITNHLGFSSV
Trigger: GACGGAGGAGAATCCCAAGTGGTTCGTTATGGCAGTCGTTACCCAACTCCTTATGGCATCACCGTCTTTGGAGAGTCGATCATTTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp ATCGGCTGCCGGTATGGATGTAACACGTGGATGTCAAAGGGTTTGTaGGTTGTGTTCACCAGCACGACTCGCCCTGATCCATCATATTTG +
Preference number: 5 (lower is better)
Translates to: IGCRYGCNTWMSKGL*VVFTSTTRPDPSYL
Trigger: CAAATATGATGGATCAGGGCGAGTCGTGCTGGTGAACACAACCCACAAACCCTTTGACATCCACGTGTTACATCCATACCGGCAGCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TACACTTTTCATTGTTGCCACACAGGAACTGCGTGCTGGAGCACATaGGCATACAGAGTGTCCTGTCTCGAAGCTGAACGGTCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: YTFHCCHTGTACWST*AYRVSCLEAERSGS
Trigger: ACTTCCAGACCGTTCAGCTTCGAGACAGGACACTCTGTATGCCCATGTGCTCCAGCACGCAGTTCCTGTGTGGCAACAATGAAAAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CTGACGGTCCCTGCACTGCCAGGCCCACTTTGGAAGTACTGTCTTTaGCTGCATACATTGGGTTTTCAAATATCACAGGCTGCTTGCCTA +
Preference number: 5 (lower is better)
Translates to: LTVPALPGPLWKYCL*LHTLGFQISQAACL
Trigger: TAGGCAAGCAGCCTGTGATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGTGCAGGGACCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCTCGATGGCCAAGCCATaGGGCCACCCCAGACTAGTG +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSSMAKP*GHPRLV
Trigger: CACTAGTCTGGGGTGGCCCAATGGCTTGGCCATCGA...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCCATCGGGGCTGAGCTaGAACCCACTGGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTPSGLS*NPLAQA
Trigger: CGCCTGTGCCAGTGGGTTCAAGCTCAGCCCCGATGG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTGTCTGTATTCCCAGGTaGCTTGCTGGCTTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIVCIPR*LAGLED
Trigger: GTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGAC...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTAACTGGTCACAAGGATaGCTACACTGCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLINWSQG*LHCCCW
Trigger: CCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTGTCACAGACCCAGTGTaGTGGAATGCACCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIVTDPV*WNAPPV
Trigger: AACAGGAGGTGCATTCCACAACACTGGGTCTGTGAC...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCCAGGGCCACAACATaGCCCAATCCTTGCAAAATC +
Preference number: 5 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHSRATT*PNPCKI
Trigger: GATTTTGCAAGGATTGGGCAATGTTGTGGCCCTGGA...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTCAAAGGGTTTGTGGGTaGTGTTCACCAGCACGACTC +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIQRVCG*CSPARL
Trigger: GAGTCGTGCTGGTGAACACAACCCACAAACCCTTTG...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATCAGGGATGCAACGCTaGTTGGCACACTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPSGMQR*LAHCHS
Trigger: TGAGTGGCAGTGTGCCAACAAGCGTTGCATCCCTGA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCACACCGATTCACAGCCTaGCTCGTCACTGTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPHRFTA*LVTVVP
Trigger: AGGGACAACAGTGACGAGCAAGGCTGTGAATCGGTG...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTACGAAGTCGGAGCCTaGGGGACAGGCACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: MSTISSLERPKALSQLLSYEVGA*GTGTAV
Trigger: TACAGCTGTGCCTGTCCCCAAGGCTCCGACTTCGTA...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp CTGGGTAGGGTGGCAGGTCCCCGAAGCTTGACAGTTCTTTTCATCTaGTCCATCCGAACAATCATTGTCTGTGTCACAGACCCACTCTTT +
Preference number: 5 (lower is better)
Translates to: LGRVAGPRSLTVLFI*SIRTIIVCVTDPLF
Trigger: AAAGAGTGGGTCTGTGACACAGACAATGATTGTTCGGATGGATCAGATGAAAAGAACTGTCAAGCTTCGGGGACCTGCCACCCTACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp CACCGGAAACGCTGTGGTGACTCACATGGAACATTGAAGCACAGGTaGATCTCCTCATCAGAACCGTCGACACAGTCATTTTCCCCATCA +
Preference number: 5 (lower is better)
Translates to: HRKRCGDSHGTLKHR*ISSSEPSTQSFSPS
Trigger: TGATGGGGAAAATGACTGTGTCGACGGTTCTGATGAGGAGATTCACCTGTGCTTCAATGTTCCATGTGAGTCACCACAGCGTTTCCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp CTTCTGGACAGTCGGGAACTCCATCACAAACTTTATCCATTGAGATaGATCGTCCAGACCCAGGACACGCCCATTCTCTTGGGTAACATG +
Preference number: 5 (lower is better)
Translates to: LLDSRELHHKLYPLR*IVQTQDTPILLGNM
Trigger: CATGTTACCCAAGAGAATGGGCGTGTCCTGGGTCTGGACGATGCATCTCAATGGATAAAGTTTGTGATGGAGTTCCCGACTGTCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS GCA 90 bp TCTGGGTCACAAGCGCACCGGAAGGACCCTCTCATGTTGACACAGTaGTGGCTGCAAAAGCCTGGAATATCACACTCATTTACATCTTCA +
Preference number: 5 (lower is better)
Translates to: SGSQAHRKDPLMLTQ*WLQKPGISHSFTSS
Trigger: TGAAGATGTAAATGAGTGTGATATTCCAGGCTTTTGCAGCCAGCACTGTGTCAACATGAGAGGGTCCTTCCGGTGCGCTTGTGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp AACTCAGGTAAGGCAAAGCAAAAGTGGGAACACCCACCATTGCTTTaGAAACAAGGGTTATTGTTAAGCTCTGCCGGTGAGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NSGKAKQKWEHPPLL*KQGLLLSSAGERGW
Trigger: CCAGCCCCTCTCACCGGCAGAGCTTAACAATAACCCTTGTTTGCAAAGCAATGGTGGGTGTTCCCACTTTTGCTTTGCCTTACCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TCAGTCCAGAACACAGAGTCTTCAAACAGAGTAAGAGCGTGCGGATaGTGGAGAACCAAATCGCTAGCAATGACCTGCCTTCGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: SVQNTESSNRVRACG*WRTKSLAMTCLRFC
Trigger: ACAGAACCGAAGGCAGGTCATTGCTAGCGATTTGGTTCTCCACCATCCGCACGCTCTTACTCTGTTTGAAGACTCTGTGTTCTGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TGCGTCGCCGTCACAGACCCAGTGTTGTGGAATGCACCTCCTGTTTaGAGGTCTGCTGTTTATACAGGTAAACTCAGTACTGGAACAGTT +
Preference number: 5 (lower is better)
Translates to: CVAVTDPVLWNAPPV*RSAVYTGKLSTGTV
Trigger: AACTGTTCCAGTACTGAGTTTACCTGTATAAACAGCAGACCTCCAAACAGGAGGTGCATTCCACAACACTGGGTCTGTGACGGCGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TGCTCCCCATTCATCCAGGCAGACTCAATTTTAGGCTGCTTTCCCTaGTCAGTCCAGAACATGAGCCCTAGCTTAGGATTCACAGCAATG +
Preference number: 5 (lower is better)
Translates to: CSPFIQADSILGCFP*SVQNMSPSLGFTAM
Trigger: CATTGCTGTGAATCCTAAGCTAGGGCTCATGTTCTGGACTGACCAGGGAAAGCAGCCTAAAATTGAGTCTGCCTGGATGAATGGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CCATTTTGTGCCCTGAGTTTCATCAGCTCCAGGGGAGGCTGGCTTTaGCTCTGGAACTATCTCAGAAGGATCTATGGACCTTCCATAGTT +
Preference number: 5 (lower is better)
Translates to: PFCALSFISSRGGWL*LWNYLRRIYGPSIV
Trigger: AACTATGGAAGGTCCATAGATCCTTCTGAGATAGTTCCAGAGCCAAAGCCAGCCTCCCCTGGAGCTGATGAAACTCAGGGCACAAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTTAATGCACTGGCCATaGGAGCAAGTGAACTGGTGG +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGLMHWP*EQVNWW
Trigger: CCACCAGTTCACTTGCTCCAATGGCCAGTGCATTAA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCGTCCACTTGTGGCATaGTTCTCATCCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGRPLVA*FSSSPS
Trigger: AGAAGGAGAGGATGAGAACAATGCCACAAGTGGACG...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATCTCTCCACCTTGGGTaGCCCAGAGAGGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILSLHLG*PREASP
Trigger: TGGGGAAGCCTCTCTGGGCAACCCAAGGTGGAGAGA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTATACTGGGCACACACTaGCCATTGTTGCAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIILGTH*PLLQGK
Trigger: CTTTCCCTGCAACAATGGCAAGTGTGTGCCCAGTAT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGACTCATCGGTCCCATaGGGACAGTCAAAGACGCCG +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSDSSVP*GQSKTP
Trigger: CGGCGTCTTTGACTGTCCCAATGGGACCGATGAGTC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGGCTCCAAAGGGCCCTaGTATGCACCGGTGAGTACA +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSGSKGP*YAPVST
Trigger: TGTACTCACCGGTGCATACAAGGGCCCTTTGGAGCC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGCTTGTCGGTTCCGTTTaGAAAGGCACTCCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQLVGSV*KGTPGF
Trigger: AAAACCTGGAGTGCCTTTCAAAACGGAACCGACAAG...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCGGGACCATGGCATCGTaGCTCTTCACCTCAGGATCA +
Preference number: 5 (lower is better)
Translates to: MSTISSLERPKALSQLLSGTMAS*LFTSGS
Trigger: TGATCCTGAGGTGAAGAGCAACGATGCCATGGTCCC...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTGCAAACAAGGGTTATaGTTAAGCTCTGCCGGTGAG +
Preference number: 5 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHCKQGL*LSSAGE
Trigger: CTCACCGGCAGAGCTTAACAATAACCCTTGTTTGCA...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGACAATAGCTCTTGGTTaGGAAACACGGGCGATCACA +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQTIALG*ETRAIT
Trigger: TGTGATCGCCCGTGTTTCCAAACCAAGAGCTATTGT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CTTTCCTCACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACGTGGCTCTTTCAATTTaGGCATTGGTACCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: LSSPDHLFFSSATPLSRHVALSI*ALVPQS
Trigger: TGACTGGGGTACCAATGCCAAAATTGAAAGAGCCAC...GTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTGGATGTCAAAGGGTTaGTGGGTTGTGTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGWMSKG*WVVFTS
Trigger: GCTGGTGAACACAACCCACAAACCCTTTGACATCCA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTCCACAGTCATTTTCTaGGTCACAGACCCATCGAGA +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQSTVIF*VTDPSR
Trigger: TCTCGATGGGTCTGTGACCAAGAAAATGACTGTGGA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTTCTCAGAGGAGATATaGTACTTCCGGATGCGGACG +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGFSEEI*YFRMRT
Trigger: CGTCCGCATCCGGAAGTACAATATCTCCTCTGAGAA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAACTGCCAGGCCCACTTaGGAAGTACTGTCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPTARPT*EVLSLA
Trigger: AGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp ATATCTGTGCTTGGGGTCAACAACGATATGCCTGGGCATATCCACTaGGACTTTGAGGAGGACACGGCGGTATGTGGTATTGATCCGTAT +
Preference number: 5 (lower is better)
Translates to: ISVLGVNNDMPGHIH*DFEEDTAVCGIDPY
Trigger: ATACGGATCAATACCACATACCGCCGTGTCCTCCTCAAAGTCTCAGTGGATATGCCCAGGCATATCGTTGTTGACCCCAAGCACAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp TGCGAAGTCCGGCTGGCAAGTGATGGGAGGGCAGTTTTTCTCATCTaGGGTGTCATTGTCATGGCAGTTGTTTATGCCATTGCAGACATA +
Preference number: 5 (lower is better)
Translates to: CEVRLASDGRAVFLI*GVIVMAVVYAIADI
Trigger: TATGTCTGCAATGGCATAAACAACTGCCATGACAATGACACCTCAGATGAGAAAAACTGCCCTCCCATCACTTGCCAGCCGGACTTCGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp CGGGATTGTTGCTACCAGATTCAAAGTCGGGAAGGTAGGCACGTTTaGTTGCACCGAATTGAGAGCCCTGTGACAGCACAGTGTAGTATA +
Preference number: 5 (lower is better)
Translates to: RDCCYQIQSREGRHV*LHRIESPVTAQCSI
Trigger: TATACTACACTGTGCTGTCACAGGGCTCTCAATTCGGTGCAATCAAACGTGCCTACCTTCCCGACTTTGAATCTGGTAGCAACAATCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GCAGGACGGAACCAATCACTCAGGAACATATACCCAGCAGCGGGATaGACCACAATGGATCGAGGGTTGTTTAAGTTGCTGATTATCTGT +
Preference number: 5 (lower is better)
Translates to: AGRNQSLRNIYPAAG*TTMDRGLFKLLIIC
Trigger: ACAGATAATCAGCAACTTAAACAACCCTCGATCCATTGTGGTGCATCCCGCTGCTGGGTATATGTTCCTGAGTGATTGGTTCCGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 90 bp CGTCCACATTATCACACACATAGTGCTGCGAGACGCAGTTCCCATTaGTGCACTTGTATTCGGTGTCTGTGCAAGGTTTGTGTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: RPHYHTHSAARRSSH*CTCIRCLCKVCVLV
Trigger: AACCAACACACAAACCTTGCACAGACACCGAATACAAGTGCAGCAATGGGAACTGCGTCTCGCAGCACTATGTGTGTGATAATGTGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TATCTCCCCGGAGTGTCAACACCTCAATGGACCGACTTGCAGGAGTaGTATAATAAATGTTTCTTGATACCCAGTCTAAGGCCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: YLPGVSTPQWTDLQE*YNKCFLIPSLRPGP
Trigger: TGGGCCTGGCCTTAGACTGGGTATCAAGAAACATTTATTATACCACTCCTGCAAGTCGGTCCATTGAGGTGTTGACACTCCGGGGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CACTGCCAGGCCCACTTTGGAAGTACTGTCTTTGGCTGCATACATTaGGTTTTCAAATATCACAGGCTGCTTGCCTACCTCCATGACGAA +
Preference number: 5 (lower is better)
Translates to: HCQAHFGSTVFGCIH*VFKYHRLLAYLHDE
Trigger: TTCGTCATGGAGGTAGGCAAGCAGCCTGTGATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TCACCTGTGAGCTTACTGACGGTCCCTGCACTGCCAGGCCCACTTTaGAAGTACTGTCTTTGGCTGCATACATTGGGTTTTCAAATATCA +
Preference number: 5 (lower is better)
Translates to: SPVSLLTVPALPGPL*KYCLWLHTLGFQIS
Trigger: TGATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGTGCAGGGACCGTCAGTAAGCTCACAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTACCACATCAATGCGGTaGACTCTTGTCTCTACCAGA +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLITTSMR*TLVSTR
Trigger: TCTGGTAGAGACAAGAGTCAACCGCATTGATGTGGT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATTGGTGTCTGTGAACTaGTTTGCCTTCATCACCGCC +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPLVSVN*FAFITA
Trigger: GGCGGTGATGAAGGCAAACAAGTTCACAGACACCAA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTTCATCAGAGTTGTCCTaGCAATCGTACACCCCATCA +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLISSELS*QSYTPS
Trigger: TGATGGGGTGTACGATTGCAAGGACAACTCTGATGA...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACGCCCAGTAGAGCTTTaGCTCCTGGATGTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILRPVEL*LLDVQG
Trigger: ACCCTGGACATCCAGGAGCAAAAGCTCTACTGGGCG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCGGTATACACCTCCCGTaGCTGCAAGTGAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: MSTISSLERPKALSQLLSGIHLP*LQVNSV
Trigger: CACAGAGTTCACTTGCAGCAACGGGAGGTGTATACC...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTAACAGAAGGTATTGTTaGCATCCACACAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLINRRYC*HPHSAG
Trigger: CCCAGCACTGTGTGGATGCAAACAATACCTTCTGTT...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTCCATTTTCAGAGGGTTaGGCAAGGCTGCTTAAGCTT +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIPFSEG*ARLLKL
Trigger: AAGCTTAAGCAGCCTTGCCAAACCCTCTGAAAATGG...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp ATGTATATTCTGGGTCACAAGCGCACCGGAAGGACCCTCTCATGTTaGCACAGTGCTGGCTGCAAAAGCCTGGAATATCACACTCATTTA +
Preference number: 5 (lower is better)
Translates to: MYILGHKRTGRTLSC*HSAGCKSLEYHTHL
Trigger: TAAATGAGTGTGATATTCCAGGCTTTTGCAGCCAGCACTGTGTCAACATGAGAGGGTCCTTCCGGTGCGCTTGTGACCCAGAATATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GATGGTGGTAAACCCGGAGACCCCTCAGGTATGGGATGTTATCTCTaGAGACGACTTTGTTACTCCCAGAGGACTTGTCAACTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: DGGKPGDPSGMGCYL*RRLCYSQRTCQLFQ
Trigger: TTGAAAGAGTTGACAAGTCCTCTGGGAGTAACAAAGTCGTCTTCAGAGATAACATCCCATACCTGAGGGGTCTCCGGGTTTACCACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GGGGCTGGACATGCTCATCAAAGATGGTCACATCCCGTAGCAAGTTaGTACTATCTCTTATCACTGTTGGTGGGTCTGTATTCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: GAGHAHQRWSHPVAS*YYLLSLLVGLYSQV
Trigger: AACCTGGGAATACAGACCCACCAACAGTGATAAGAGATAGTATCAACTTGCTACGGGATGTGACCATCTTTGATGAGCATGTCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GTGGCCATAAATACAGCGACTGTTATCACACCGGAAACGCTGTGGTaGCTCACATGGAACATTGAAGCACAGGTGAATCTCCTCATCAGA +
Preference number: 5 (lower is better)
Translates to: VAINTATVITPETLW*LTWNIEAQVNLLIR
Trigger: TCTGATGAGGAGATTCACCTGTGCTTCAATGTTCCATGTGAGTCACCACAGCGTTTCCGGTGTGATAACAGTCGCTGTATTTATGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GGAAGACTGGTGGTACACTTGAGGGTTGGTGTCTGTGAACTTGTTTaGCTTCATCACCGCCATCTTTGTCCAATCAGTAAAGAACACGTG +
Preference number: 5 (lower is better)
Translates to: GRLVVHLRVGVCELV*LHHRHLCPISKEHV
Trigger: CACGTGTTCTTTACTGATTGGACAAAGATGGCGGTGATGAAGGCAAACAAGTTCACAGACACCAACCCTCAAGTGTACCACCAGTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 90 bp GTTTGTGATGAGAAGAGCAGGAAGTTCTTAACGGCAACACAGTGGTaGTCATCTGCATCCAGTTCAAAGCCAAATTCACACTTGCACCGG +
Preference number: 5 (lower is better)
Translates to: VCDEKSRKFLTATQW*SSASSSKPNSHLHR
Trigger: CCGGTGCAAGTGTGAATTTGGCTTTGAACTGGATGCAGATGAGCACCACTGTGTTGCCGTTAAGAACTTCCTGCTCTTCTCATCACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 90 bp GTGACCCTCCAAATCAGAGAACTCGATGTAACCCAGGTGAGCATCTaGCCAGTACAAGAGATCATTGGTGTAGTCAATGGTGATGGCATT +
Preference number: 5 (lower is better)
Translates to: VTLQIRELDVTQVSI*PVQEIIGVVNGDGI
Trigger: AATGCCATCACCATTGACTACACCAATGATCTCTTGTACTGGGCAGATGCTCACCTGGGTTACATCGAGTTCTCTGATTTGGAGGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp CCACATTATCACACACATAGTGCTGCGAGACGCAGTTCCCATTGCTaGACTTGTATTCGGTGTCTGTGCAAGGTTTGTGTGTTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: PHYHTHSAARRSSHC*TCIRCLCKVCVLVF
Trigger: GAAAACCAACACACAAACCTTGCACAGACACCGAATACAAGTGCAGCAATGGGAACTGCGTCTCGCAGCACTATGTGTGTGATAATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp GCCGTTTGTGATGAGAAGAGCAGGAAGTTCTTAACGGCAACACAGTaGTGCTCATCTGCATCCAGTTCAAAGCCAAATTCACACTTGCAC +
Preference number: 5 (lower is better)
Translates to: AVCDEKSRKFLTATQ*CSSASSSKPNSHLH
Trigger: GTGCAAGTGTGAATTTGGCTTTGAACTGGATGCAGATGAGCACCACTGTGTTGCCGTTAAGAACTTCCTGCTCTTCTCATCACAAACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp TCACACTCATTTACATCTTCACAGGTCTTGGTATCATTGGCAAGTTaGTATCCTATTGGACACACGCAGGTGGCTCCAAAGGGCCCTTGT +
Preference number: 5 (lower is better)
Translates to: SHSFTSSQVLVSLAS*YPIGHTQVAPKGPC
Trigger: ACAAGGGCCCTTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CTTTGCAAACAAGGGTTATTGTTAAGCTCTGCCGGTGAGAGGGGCTaGACATGCTCATCAAAGATGGTCACATCCCGTAGCAAGTTGATA +
Preference number: 5 (lower is better)
Translates to: LCKQGLLLSSAGERG*TCSSKMVTSRSKLI
Trigger: TATCAACTTGCTACGGGATGTGACCATCTTTGATGAGCATGTCCAGCCCCTCTCACCGGCAGAGCTTAACAATAACCCTTGTTTGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGGTCCCAGGGCAATTTaGCTGTTCATCTGCACCATC +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSGPRAI*LFICTI
Trigger: GATGGTGCAGATGAACAGCAAAATTGCCCTGGGACC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGAAGGCTCTCTCCACCTaGGGTTGCCCAGAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLKALST*GCPERL
Trigger: AAGCCTCTCTGGGCAACCCAAGGTGGAGAGAGCCTT...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTGGTATCATTGGCAAGTaGGTATCCTATTGGACACAC +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGGIIGK*VSYWTH
Trigger: GTGTGTCCAATAGGATACCAACTTGCCAATGATACC...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGGTTTTGTGACATTTTaGCTGATCAGTACTGTCCTG +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQGFVTF*LISTVL
Trigger: CAGGACAGTACTGATCAGCAAAAATGTCACAAAACC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATCTCTGAAGACGACTTaGTTACTCCCAGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPSLKTT*LLPEDL
Trigger: CAAGTCCTCTGGGAGTAACAAAGTCGTCTTCAGAGA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTATCTCTTATCACTGTaGGTGGGTCTGTATTCCCAG +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGYLLSL*VGLYSQ
Trigger: CTGGGAATACAGACCCACCAACAGTGATAAGAGATA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTGGCTGCATCCTCCATaGAACTGGTCACAAGGATTG +
Preference number: 5 (lower is better)
Translates to: MSTISSLERPKALSQLLSWLHPP*NWSQGL
Trigger: CAATCCTTGTGACCAGTTCAATGGAGGATGCAGCCA...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCAACTCTGTGGTGCTGTaGCAGCTCCTGAATAGGCAT +
Preference number: 5 (lower is better)
Translates to: MSTISSLERPKALSQLLSNSVVL*QLLNRH
Trigger: ATGCCTATTCAGGAGCTGCAACAGCACCACAGAGTT...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGTCATCTGAGGTGTCATaGTCATGGCAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQSSEVS*SWQLFM
Trigger: CATAAACAACTGCCATGACAATGACACCTCAGATGA...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTTGTCAGACATGAGTTaGTACCCAGGAAGACAGGAA +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGLSDMS*YPGRQE
Trigger: TTCCTGTCTTCCTGGGTACAAACTCATGTCTGACAA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTCCACGCAAGTACGTTaGTCAGACATGAGTTTGTAC +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGSTQVR*SDMSLY
Trigger: GTACAAACTCATGTCTGACAAACGTACTTGCGTGGA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGCATCCATGCCAATTCTaGCAATGTATGCATGATCAC +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQHPCQF*QCMHDH
Trigger: GTGATCATGCATACATTGCAAGAATTGGCATGGATG...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCAGTCGTCAAAACCATaGCACACTGCCCACTGCGGG +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTQSSKP*HTAHCG
Trigger: CCCGCAGTGGGCAGTGTGCAATGGTTTTGACGACTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCTATGGAAAGACCATTaGGCCAGCCAAGGTTCGCAG +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSLWKDH*ASQGSQ
Trigger: CTGCGAACCTTGGCTGGCCAAATGGTCTTTCCATAG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATGGCTACAGACCTGCTaGCAAGGGTTGGACACTGAC +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILWLQTC*QGLDTD
Trigger: GTCAGTGTCCAACCCTTGCAAGCAGGTCTGTAGCCA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp AATAAATATAGCCAGTGTCATGGTCCACTGCCAGGCCCCGAGGGGTaGCAATGCCTTCAGAAACAAGTACAGTTCTATTGGTACAGTCAA +
Preference number: 5 (lower is better)
Translates to: NKYSQCHGPLPGPEG*QCLQKQVQFYWYSQ
Trigger: TTGACTGTACCAATAGAACTGTACTTGTTTCTGAAGGCATTGTCACCCCTCGGGGCCTGGCAGTGGACCATGACACTGGCTATATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GATGTCAAAGGGTTTGTGGGTTGTGTTCACCAGCACGACTCGCCCTaGTCCATCATATTTGTTTCCCTTTTCAACTGTCCGTGTATTCCA +
Preference number: 5 (lower is better)
Translates to: DVKGFVGCVHQHDSP*SIIFVSLFNCPCIP
Trigger: TGGAATACACGGACAGTTGAAAAGGGAAACAAATATGATGGATCAGGGCGAGTCGTGCTGGTGAACACAACCCACAAACCCTTTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp TATCTTCACAGTCATTGTCATGGTCACAGACATAGGCACGAAGGATaGACTCTCCACTGCCACATTGGAATTCTTTTTGCGAACACAGCG +
Preference number: 5 (lower is better)
Translates to: YLHSHCHGHRHRHEG*TLHCHIGILFANTA
Trigger: CGCTGTGTTCGCAAAAAGAATTCCAATGTGGCAGTGGAGAGTGCATCCTTCGTGCCTATGTCTGTGACCATGACAATGACTGTGAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS GCA 90 bp AAACAAGGGTTATTGTTAAGCTCTGCCGGTGAGAGGGGCTGGACATaGTCATCAAAGATGGTCACATCCCGTAGCAAGTTGATACTATCT +
Preference number: 5 (lower is better)
Translates to: KQGLLLSSAGERGWT*SSKMVTSRSKLILS
Trigger: AGATAGTATCAACTTGCTACGGGATGTGACCATCTTTGATGAGCATGTCCAGCCCCTCTCACCGGCAGAGCTTAACAATAACCCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CTGAGTCATCAAATTCAACATCATAACCATGCTGTATCCCCGATATaGGGACCATGGCATCGTTGCTCTTCACCTCAGGATCAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: LSHQIQHHNHAVSPI*GPWHRCSSPQDQGK
Trigger: TTTCCCTTGATCCTGAGGTGAAGAGCAACGATGCCATGGTCCCCATATCGGGGATACAGCATGGTTATGATGTTGAATTTGATGACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CTGCTGACCCAGTCTACAGCCAGACTTTCAGCACGTCTTAACCTGTaGCTTATGATGGTCTCCTGGTTTGTCTTATTCAAAAACATCCTC +
Preference number: 5 (lower is better)
Translates to: LLTQSTARLSARLNL*LMMVSWFVLFKNIL
Trigger: GAGGATGTTTTTGAATAAGACAAACCAGGAGACCATCATAAGCCACAGGTTAAGACGTGCTGAAAGTCTGGCTGTAGACTGGGTCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCCGTCCACTTGTGGCATaGTTCTCATCCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGRPLVA*FSSSPS
Trigger: AGAAGGAGAGGATGAGAACAATGCCACAAGTGGACG...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCACCAGGTCTTTCCGATaGCTACCATCCATGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSTRSFR*LPSMKA
Trigger: AGCCTTCATGGATGGTAGCAATCGGAAAGACCTGGT...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTCAGACACTCAACATTTaGCAACCTGTTTGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLIQTLNI*QPVCCD
Trigger: ATCACAGCAAACAGGTTGCAAAATGTTGAGTGTCTG...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCACACACTTGCCATTGTaGCAGGGAAAGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSTHLPL*QGKEEE
Trigger: CTCCTCTTCCTTTCCCTGCAACAATGGCAAGTGTGT...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGGCACACACTTGCCATaGTTGCAGGGAAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILGTHLP*LQGKEE
Trigger: CTCTTCCTTTCCCTGCAACAATGGCAAGTGTGTGCC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAAAGGACCCTCTCATGTaGACACAGTGCTGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILKDPLM*TQCWLQ
Trigger: TTGCAGCCAGCACTGTGTCAACATGAGAGGGTCCTT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCGCCTCTCACACAGTaGACAGAATCATCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: MSTISSLERPKALSQLLSSPLTQ*TESSER
Trigger: CCTTTCTGATGATTCTGTCAACTGTGTGAGAGGCGA...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTACACCCACCATTGCTTaGCAAACAAGGGTTATTGTT +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGTPTIA*QTRVIV
Trigger: AACAATAACCCTTGTTTGCAAAGCAATGGTGGGTGT...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGGCACACATCGCCCATaGGCACAAGTGAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTGTHRP*AQVKAV
Trigger: AACAGCCTTCACTTGTGCCAATGGGCGATGTGTGCC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACCTTGCTCGTCACTGTaGTCCCTGCAGTCGTCAAAA +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILPCSSL*SLQSSK
Trigger: TTTTGACGACTGCAGGGACAACAGTGACGAGCAAGG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACAGAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTTTGGAAGTACTGTCTTaGGCTGCATACATTGGGTTT +
Preference number: 5 (lower is better)
Translates to: TEARGRVQLNHFVYLLCGLEVLS*AAYIGF
Trigger: AAACCCAATGTATGCAGCCAAAGACAGTACTTCCAA...ACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp ATTCCTCTAGGATGCCCCAAGTTTTCAGTTATGAGAGTAACACGCTaGTTTCCCTCCAAGTTGACCACATCAATGCGGTTGACTCTTGTC +
Preference number: 5 (lower is better)
Translates to: IPLGCPKFSVMRVTR*FPSKLTTSMRLTLV
Trigger: GACAAGAGTCAACCGCATTGATGTGGTCAACTTGGAGGGAAATCAGCGTGTTACTCTCATAACTGAAAACTTGGGGCATCCTAGAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 90 bp TCTCCTTGCACTCGTCAATATCCACGCAAGTACGTTTGTCAGACATaGGTTTGTACCCAGGAAGACAGGAACAGTAGAAACTGGTTATGG +
Preference number: 5 (lower is better)
Translates to: SPCTRQYPRKYVCQT*VCTQEDRNSRNWLW
Trigger: CCATAACCAGTTTCTACTGTTCCTGTCTTCCTGGGTACAAACTCATGTCTGACAAACGTACTTGCGTGGATATTGACGAGTGCAAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TCTTTAAAAACGGTGAGTCCAAACGGATGTGTCATCTGGTCAACATaGCCCAGTCTTTTCCTGTCTAAACCATCAAGGTTGCTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SLKTVSPNGCVIWST*PSLFLSKPSRLLCS
Trigger: TGAGCACAGCAACCTTGATGGTTTAGACAGGAAAAGACTGGGCCATGTTGACCAGATGACACATCCGTTTGGACTCACCGTTTTTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 90 bp CTGGAATATCACACTCATTTACATCTTCACAGGTCTTGGTATCATTaGCAAGTTGGTATCCTATTGGACACACGCAGGTGGCTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: LEYHTHLHLHRSWYH*QVGILLDTRRWLQR
Trigger: CCTTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTGATATTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGTTGGCACAAGTAAGTaGATCACATGTTGGATAATA +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQVGTSK*ITCWII
Trigger: TATTATCCAACATGTGATCAACTTACTTGTGCCAAC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACCATCCGAACAATCATaGTCTGTGTCACAGACCCAC +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILPSEQS*SVSQTH
Trigger: GTGGGTCTGTGACACAGACAATGATTGTTCGGATGG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGGTAAAATTAGACCCGTaGGGTTTGATTCTACGAATT +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQVKLDP*GLILRI
Trigger: AATTCGTAGAATCAAACCCAACGGGTCTAATTTTAC...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGAATGCACCTCCTGTTaGGAGGTCTGCTGTTTATAC +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSECTSC*EVCCLY
Trigger: GTATAAACAGCAGACCTCCAAACAGGAGGTGCATTC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAGGCACGTGGAAGGGTCCAACTGAATCACTTTGTGTACCTTCTGTGTGGTCAGATAATCACAGTCTTATaGGTTCCATCCATGCCAATT +
Preference number: 5 (lower is better)
Translates to: EARGRVQLNHFVYLLCGQIITVL*VPSMPI
Trigger: AATTGGCATGGATGGAACCAATAAGACTGTGATTAT...CTGACCACACAGAAGGTACACAAAGTGATTCAGTTGGACCCTTCCACGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCGGGATACACTTTTCATaGTTGCCACACAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSGIHFS*LPHRNC
Trigger: GCAGTTCCTGTGTGGCAACAATGAAAAGTGTATCCC...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTTGCAAGGTTTGTGTGTaGGTTTTCTACAGTGTTCTT +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLICKVCV*VFYSVL
Trigger: AAGAACACTGTAGAAAACCAACACACAAACCTTGCA...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp CTTTTGTGTGAAGAAGATTCTATTATTTCTGCGGTCATAGTCCAGTaGGATGGCCATTCCTTCCACACTTATCGCTTGGAAAGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: LLCEEDSIISAVIVQ*DGHSFHTYRLERQV
Trigger: AACCTGCCTTTCCAAGCGATAAGTGTGGAAGGAATGGCCATCGCACTGGACTATGACCGCAGAAATAATAGAATCTTCTTCACACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp AATCACAGTCTTATTGGTTCCATCCATGCCAATTCTTGCAATGTATaGATGATCACCCCAATCTGCCCAGTAGACATACCCTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: NHSLIGSIHANSCNV*MITPICPVDIPSLR
Trigger: CCTCAAAGAGGGTATGTCTACTGGGCAGATTGGGGTGATCATGCATACATTGCAAGAATTGGCATGGATGGAACCAATAAGACTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GGTAGAGATAATCACAGTCTTATTGGTTCCATCCATGCCAATTCTTaGAATGTATGCATGATCACCCCAATCTGCCCAGTAGACATACCC +
Preference number: 5 (lower is better)
Translates to: GRDNHSLIGSIHANS*NVCMITPICPVDIP
Trigger: GGGTATGTCTACTGGGCAGATTGGGGTGATCATGCATACATTGCAAGAATTGGCATGGATGGAACCAATAAGACTGTGATTATCTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CAAATTCAACATCATAACCATGCTGTATCCCCGATATGGGGACCATaGCATCGTTGCTCTTCACCTCAGGATCAAGGGAAATTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: QIQHHNHAVSPIWGP*HRCSSPQDQGKFQK
Trigger: TTTTTGGAATTTCCCTTGATCCTGAGGTGAAGAGCAACGATGCCATGGTCCCCATATCGGGGATACAGCATGGTTATGATGTTGAATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp CTTATCACTGTTGGTGGGTCTGTATTCCCAGGTTGCTTGCTGGCTTaGAAGACTTTTCTCAAATTTCTATCCACCCAAATGATCGACTCT +
Preference number: 5 (lower is better)
Translates to: LITVGGSVFPGCLLA*KTFLKFLSTQMIDS
Trigger: AGAGTCGATCATTTGGGTGGATAGAAATTTGAGAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGACCCACCAACAGTGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp AAAAGAAAAATGGTTGCTCATGTGGGTCACATGAGCAGTGCACTTTCAGAAGGCCACAAACTTTATCCATaGAGATGCATCGTCCAGACC +
Preference number: 5 (lower is better)
Translates to: KRKMVAHVGHMSSALSEGHKLYP*RCIVQT
Trigger: GGTCTGGACGATGCATCTCAATGGATAAAGTTTGTG...GCCTTCTGAAAGTGCACTGCTCATGTGACCCACATGAGCAACCATTTTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092551.5
CDS-3UTR CAA 90 bp ATGAGTACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCCGCTACCGTCTTCCTTaGAATTCCATCATATGTTAC +
Preference number: 5 (lower is better)
Translates to: MSTISSLERPKALSQLLSRYRLP*NSIICY
Trigger: GTAACATATGATGGAATTCAAAGGAAGACGGTAGCG...GGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGTACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCATCTAAACCATCAAGGTaGCTGTGCTCAATCTTATCA +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPSKPSR*LCSILS
Trigger: TGATAAGATTGAGCACAGCAACCTTGATGGTTTAGA...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGACACCCGCTGGAAGTTaGGAACTGGGAAGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLTPAGS*ELGSRN
Trigger: ATTTCTGCTTCCCAGTTCCAAACTTCCAGCGGGTGT...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAGACCAAAACATTACATaGTCACCCATTCTAGGATCT +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPDQNIT*SPILGS
Trigger: AGATCCTAGAATGGGTGACAATGTAATGTTTTGGTC...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCATATCCACTGAGACTTaGAGGAGGACACGGCGGTAT +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTISTET*RRTRRY
Trigger: ATACCGCCGTGTCCTCCTCAAAGTCTCAGTGGATAT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGAAGTAGCACAGTTCTaGCCATCATCTTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILEVAQF*PSSSRV
Trigger: GACTCTGGAAGATGATGGCAAGAACTGTGCTACTTC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GGCACCCTACTTTATGAAGTAGGTTTGGTTTTAGTCAGTCAGCTCCAGAATTCCCTTTCAATTTTGGCATaGGTACCCCAGTCAGTCCAA +
Preference number: 5 (lower is better)
Translates to: GTLLYEVGLVLVSQLQNSLSILA*VPQSVQ
Trigger: TTGGACTGACTGGGGTACCAATGCCAAAATTGAAAG...GGAATTCTGGAGCTGACTGACTAAAACCAAACCTACTTCATAAAGTAGGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCAGTACTTGTTATCGTaGGCCAGATACCAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTQYLLS*ARYQLP
Trigger: AGGCAGCTGGTATCTGGCCAACGATAACAAGTACTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATCCACCACACAGTACTaGTTATCGTTGGCCAGATAC +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILSTTQY*LSLARY
Trigger: GTATCTGGCCAACGATAACAAGTACTGTGTGGTGGA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CACCAGATCATTTATTCTTCAGCTCAGCGACCCCACTCAGCAGGCACTCTCATTCTATTTTCTCCTAGATaGCAACCAGTTTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: HQIIYSSAQRPHSAGTLILFSPR*QPVSSE
Trigger: TTCTGATGAAACTGGTTGCAATCTAGGAGAAAATAG...AATGAGAGTGCCTGCTGAGTGGGGTCGCTGAGCTGAAGAATAAATGATCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp AAGAGTATAGTCTGTCCAGTAAATGTTGCGACCTATCCAGTCTACTaGAATCATTTCTGTCAAAGAGAGACCACTGTCATGGACCACTCT +
Preference number: 5 (lower is better)
Translates to: KSIVCPVNVATYPVY*NHFCQRETTVMDHS
Trigger: AGAGTGGTCCATGACAGTGGTCTCTCTTTGACAGAAATGATTGCAGTAGACTGGATAGGTCGCAACATTTACTGGACAGACTATACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp GTACTGTCTTTGGCTGCATACATTGGGTTTTCAAATATCACAGGCTaGTTGCCTACCTCCATGACGAATTGTTCATTCATTGCCATGGAT +
Preference number: 5 (lower is better)
Translates to: VLSLAAYIGFSNITG*LPTSMTNCSFIAMD
Trigger: ATCCATGGCAATGAATGAACAATTCGTCATGGAGGTAGGCAAGCAGCCTGTGATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 90 bp TGCCATAACGAACCACTTGGGATTCTCCTCCGTCACGATGGATCCTaGCAATTATATCTAAGGAATCATCAACCCAATAAATATAGCCAG +
Preference number: 5 (lower is better)
Translates to: CHNEPLGILLRHDGS*QLYLRNHQPNKYSQ
Trigger: CTGGCTATATTTATTGGGTTGATGATTCCTTAGATATAATTGCCAGGATCCATCGTGACGGAGGAGAATCCCAAGTGGTTCGTTATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGTCCCTCACAAGTCATTaGGTCCCTCTGAAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLSLTSH*VPLKLH
Trigger: ATGAAGCTTCAGAGGGACCAAATGACTTGTGAGGGA...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCGTACATTACAACAGATaGGTTCCTCCCGTGCCACTT +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTVHYNR*VPPVPL
Trigger: AAGTGGCACGGGAGGAACCAATCTGTTGTAATGTAC...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATTACTCCCAGAGGACTaGTCAACTCTTTCAATGACC +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILLLPED*STLSMT
Trigger: GGTCATTGAAAGAGTTGACAAGTCCTCTGGGAGTAA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGTAGACATACCCTCTTaGAGGATGAAGGACAATTCC +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILVDIPS*RMKDNS
Trigger: GGAATTGTCCTTCATCCTCAAAGAGGGTATGTCTAC...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTCAATGGTGATGGCATaGGGCCATTCGATCTTGGTA +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTSMVMA*GHSILV
Trigger: TACCAAGATCGAATGGCCCAATGCCATCACCATTGA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ACTATCTCTTCTCTAGAGAGACCCAAAGCCCTAAGCCAACTCCTTTCCTCACCAACCAGCAATTTCTCTTaGTTCCCTTTCCCAAATTTA +
Preference number: 5 (lower is better)
Translates to: TISSLERPKALSQLLSSPTSNFS*FPFPNL
Trigger: TAAATTTGGGAAAGGGAACAAAGAGAAATTGCTGGT...TGGTGAGGAAAGGAGTTGGCTTAGGGCTTTGGGTCTCTCTAGAGAAGAGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp ATTCCACGGTTCTTAGACTCTGCTAGAATCCGGAAGTTTCTTCCATaGAGATCTCCAACTAGCAAATCCCGACCATTAGAGAAGATAATG +
Preference number: 5 (lower is better)
Translates to: IPRFLDSARIRKFLP*RSPTSKSRPLEKIM
Trigger: CATTATCTTCTCTAATGGTCGGGATTTGCTAGTTGGAGATCTTCATGGAAGAAACTTCCGGATTCTAGCAGAGTCTAAGAACCGTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 90 bp TTGATACTATCTCTTATCACTGTTGGTGGGTCTGTATTCCCAGGTTaGTTGCTGGCTTGGAAGACTTTTCTCAAATTTCTATCCACCCAA +
Preference number: 5 (lower is better)
Translates to: LILSLITVGGSVFPG*LLAWKTFLKFLSTQ
Trigger: TTGGGTGGATAGAAATTTGAGAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGACCCACCAACAGTGATAAGAGATAGTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 90 bp TCCTCTACTCTATCAAAGTCCAGGGCCACAACATTGCCCAATCCTTaGAAAATCAGAGAGTATGACGTGCCATCTATAGTTAAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SSTLSKSRATTLPNP*KIREYDVPSIVKFL
Trigger: AAGAAACTTAACTATAGATGGCACGTCATACTCTCTGATTTTGCAAGGATTGGGCAATGTTGTGGCCCTGGACTTTGATAGAGTAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCACAAACTTTATCCATaGAGATGCATCGTCCAGACC +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTHKLYP*RCIVQT
Trigger: GGTCTGGACGATGCATCTCAATGGATAAAGTTTGTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCACATCTTCACAGGTCTaGGTATCATTGGCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTTSSQV*VSLASW
Trigger: CCAACTTGCCAATGATACCAAGACCTGTGAAGATGT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCATACACTTTTCATTGTaGCCACACAGGAACTGCGTG +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTIHFSL*PHRNCV
Trigger: CACGCAGTTCCTGTGTGGCAACAATGAAAAGTGTAT...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCAGATAAATCCTCCATaGCTTAACTGGGTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTQINPP*LNWVQF
Trigger: GAACTGCACCCAGTTAAGCAATGGAGGATTTATCTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTACCATCTCTGCATAGATaGGATTTTCGAAGTTCGTTG +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILPSLHR*DFRSSL
Trigger: CAACGAACTTCGAAAATCCAATCTATGCAGAGATGG...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAACAATGGATCGAGGGTaGTTTAAGTTGCTGATTATC +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILTMDRG*FKLLII
Trigger: GATAATCAGCAACTTAAACAACCCTCGATCCATTGT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp GAAATAAATAGTCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGCAGGTCTTGGTATCATaGGCAAGTTGGTATCCTATT +
Preference number: 5 (lower is better)
Translates to: EINSQYNNSLHPEPNTQLQVLVS*ASWYPI
Trigger: AATAGGATACCAACTTGCCAATGATACCAAGACCTG...CAGCTGGGTGTTTGGCTCTGGGTGCAAACTGTTATTGTATTGACTATTTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAACATCCCGTAGCAAGTaGATACTATCTCTTATCACT +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILTSRSK*ILSLIT
Trigger: AGTGATAAGAGATAGTATCAACTTGCTACGGGATGT...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCTCAAAACAGAAGGTATaGTTTGCATCCACACAGTGC +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTSKQKV*FASTQC
Trigger: GCACTGTGTGGATGCAAACAATACCTTCTGTTTTGA...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp CATTCATCCACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTATGCTTGGGTTTTCGTTaGAAGATATTCCATTTTGTG +
Preference number: 5 (lower is better)
Translates to: HSSTLPPFHSFVNTRAILCLGFR*KIFHFV
Trigger: CACAAAATGGAATATCTTCAAACGAAAACCCAAGCA...TAATATTGCACGTGTGTTAACGAATGAATGGAAGGGTGGGAGAGTGGATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS-3UTR CAA 90 bp ATATATTCACAGCATCACCTCCTGACAACATCAGTGCAAGATATACACAGTACCCAGCCATGGAATTTATaGTCTGATTTGAAAAGTCAC +
Preference number: 5 (lower is better)
Translates to: IYSQHHLLTTSVQDIHSTQPWNL*SDLKSH
Trigger: GTGACTTTTCAAATCAGACAATAAATTCCATGGCTG...GGTACTGTGTATATCTTGCACTGATGTTGTCAGGAGGTGATGCTGTGAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 90 bp GAAATTCCAAAAATTACATTTTCTCTTACGGATATCAAGAAAGGTTaGTCGCCTCTCACACAGTTGACAGAATCATCAGAAAGGTTCCAC +
Preference number: 5 (lower is better)
Translates to: EIPKITFSLTDIKKG*SPLTQLTESSERFH
Trigger: GTGGAACCTTTCTGATGATTCTGTCAACTGTGTGAGAGGCGATCAACCTTTCTTGATATCCGTAAGAGAAAATGTAATTTTTGGAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GAGCCGTGGACCACAAGACCCCACGGGTGGGCCAGGTaGTGCACCAGGATCATCCTCTCTGTACCGTCCACA +
Preference number: 6 (lower is better)
Translates to: EPWTTRPHGWAR*CTRIILSVPST
Trigger: TGTGGACGGTACAGAGAGGATGATCCTGGTGCACCACCTGGCCCACCCGTGGGGTCTTGTGGTCCACGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GCAGTTCTGCAGCTCGTCGAGGGCATCCGCGCAGTCTaGGTCGCCGTCACAGACCCAGTGTTGTGGAATGCA +
Preference number: 6 (lower is better)
Translates to: AVLQLVEGIRAV*VAVTDPVLWNA
Trigger: TGCATTCCACAACACTGGGTCTGTGACGGCGACGCAGACTGCGCGGATGCCCTCGACGAGCTGCAGAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp AAAGCCTGGGGGCTCGTGCAGTTGCCATCTCGGCACTaGAACTGTCCCAGACGGCAGAAGCGGTGTGGACAC +
Preference number: 6 (lower is better)
Translates to: KAWGLVQLPSRH*NCPRRQKRCGH
Trigger: GTGTCCACACCGCTTCTGCCGTCTGGGACAGTTCCAGTGCCGAGATGGCAACTGCACGAGCCCCCAGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CCGTTGTCACAGCGAAAATTCCCACTGCCACATTCTTaGCCACTGACTGGCGCCAGGCAGGCAGCGATCGCC +
Preference number: 6 (lower is better)
Translates to: PLSQRKFPLPHS*PLTGARQAAIA
Trigger: GGCGATCGCTGCCTGCCTGGCGCCAGTCAGTGGCCAAGAATGTGGCAGTGGGAATTTTCGCTGTGACAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 72 bp TGTTGCAGGGAAAGGAAGAGGAGCCACACTGCTGTGTaGGGGGCTCTCGGGCTGGGTCTCCCTCACAAGTCA +
Preference number: 6 (lower is better)
Translates to: CCRERKRSHTAV*GALGLGLPHKS
Trigger: TGACTTGTGAGGGAGACCCAGCCCGAGAGCCCCCCACACAGCAGTGTGGCTCCTCTTCCTTTCCCTGCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 72 bp GAACCCACTGGCACAGGCGCAGGAGAACATTCCGCCTaGTACGGGCAGGCAGATCTGCTGGCAAGCATTTGG +
Preference number: 6 (lower is better)
Translates to: EPTGTGAGEHSA*YGQADLLASIW
Trigger: CCAAATGCTTGCCAGCAGATCTGCCTGCCCGTACCAGGCGGAATGTTCTCCTGCGCCTGTGCCAGTGGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CCATCGGCACAATCCTGGCGAGCATTGCACAAAGCCTaGGGGCTCGTGCAGTTGCCATCTCGGCACTGGAAC +
Preference number: 6 (lower is better)
Translates to: PSAQSWRALHKA*GLVQLPSRHWN
Trigger: GTTCCAGTGCCGAGATGGCAACTGCACGAGCCCCCAGGCTTTGTGCAATGCTCGCCAGGATTGTGCCGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GCAGGTGAAGGAGGTGGGCGGGCAAGTAGACGACGGTaGACGAGTGGGGCAGTTTTGCTCATCACTGCCATC +
Preference number: 6 (lower is better)
Translates to: AGEGGGRASRRR*TSGAVLLITAI
Trigger: GATGGCAGTGATGAGCAAAACTGCCCCACTCGTTCACCGTCGTCTACTTGCCCGCCCACCTCCTTCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp CAGATTGGTTCCTCCCGTGCCACTTGTTGGCCTGCATaGCCTGGTGAGTGCCGCGGTCAGTCCAGAACACAG +
Preference number: 6 (lower is better)
Translates to: QIGSSRATCWPA*PGECRGQSRTQ
Trigger: CTGTGTTCTGGACTGACCGCGGCACTCACCAGGTCATGCAGGCCAACAAGTGGCACGGGAGGAACCAATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AATCCTGGCGAGCATTGCACAAAGCCTGGGGGCTCGTaGAGTTGCCATCTCGGCACTGGAACTGTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: NPGEHCTKPGGS*SCHLGTGTVPD
Trigger: GTCTGGGACAGTTCCAGTGCCGAGATGGCAACTGCACGAGCCCCCAGGCTTTGTGCAATGCTCGCCAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TGGGGAGTTCACTGGCTGCATCACACTCAACGGTGCTaGCAGTTACGAAGTCGGAGCCTTGGGGACAGGCAC +
Preference number: 6 (lower is better)
Translates to: WGVHWLHHTQRC*QLRSRSLGDRH
Trigger: GTGCCTGTCCCCAAGGCTCCGACTTCGTAACTGGCAGCACCGTTGAGTGTGATGCAGCCAGTGAACTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TCCCCATCACAGACATACAGTGGGCTGATACACCGGTaGTCAGGGCAGCGAAACTGGGTAGGGTGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: SPSQTYSGLIHR*SGQRNWVGWQV
Trigger: GACCTGCCACCCTACCCAGTTTCGCTGCCCTGACCACCGGTGTATCAGCCCACTGTATGTCTGTGATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 72 bp GATGCAGGTACCATCTCCCTGGCACTGAAACTCATCTaGGTGGCACATACCAGGAGGCCTGGTCGGACAGCC +
Preference number: 6 (lower is better)
Translates to: DAGTISLALKLI*VAHTRRPGRTA
Trigger: GGCTGTCCGACCAGGCCTCCTGGTATGTGCCACCCAGATGAGTTTCAGTGCCAGGGAGATGGTACCTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 72 bp TCCGTTGTCACAGCGAAAATTCCCACTGCCACATTCTaGGCCACTGACTGGCGCCAGGCAGGCAGCGATCGC +
Preference number: 6 (lower is better)
Translates to: SVVTAKIPTATF*ATDWRQAGSDR
Trigger: GCGATCGCTGCCTGCCTGGCGCCAGTCAGTGGCCAAGAATGTGGCAGTGGGAATTTTCGCTGTGACAACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 90 bp GATACAGTATCCGTTGTCACAGCGAAAATTCCCACTGCCACATTCTaGGCCACTGACTGGCGCCAGGCAGGCAGCGATCGCCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: DTVSVVTAKIPTATF*ATDWRQAGSDRQQQ
Trigger: CTGCTGCTGGCGATCGCTGCCTGCCTGGCGCCAGTCAGTGGCCAAGAATGTGGCAGTGGGAATTTTCGCTGTGACAACGGATACTGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 90 bp GTCGAGGGCATCCGCGCAGTCTGCGTCGCCGTCACAGACCCAGTGTaGTGGAATGCACCTCCTGTTTGGAGGTCTGCTGTTTATACAGGT +
Preference number: 6 (lower is better)
Translates to: VEGIRAVCVAVTDPV*WNAPPVWRSAVYTG
Trigger: ACCTGTATAAACAGCAGACCTCCAAACAGGAGGTGCATTCCACAACACTGGGTCTGTGACGGCGACGCAGACTGCGCGGATGCCCTCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TTCCTCCCGTGCCACTTGTTGGCCTGCATGACCTGGTaGGTGCCGCGGTCAGTCCAGAACACAGAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: FLPCHLLACMTW*VPRSVQNTESS
Trigger: TGAAGACTCTGTGTTCTGGACTGACCGCGGCACTCACCAGGTCATGCAGGCCAACAAGTGGCACGGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GCAGGTCCGGCTGGCACAGTGCGAAGGGTCTTCATCTaGATTATCCAGGCAGTCGTCCACGGAGTCACACTG +
Preference number: 6 (lower is better)
Translates to: AGPAGTVRRVFI*IIQAVVHGVTL
Trigger: CAGTGTGACTCCGTGGACGACTGCCTGGATAATTCAGATGAAGACCCTTCGCACTGTGCCAGCCGGACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GGTCACACCTGTACTCGATGGGAACACACTGACCATTaGAGCACGTCAGCTGCTGGCTTGAGCACGTGGTCC +
Preference number: 6 (lower is better)
Translates to: GHTCTRWEHTDH*STSAAGLSTWS
Trigger: GGACCACGTGCTCAAGCCAGCAGCTGACGTGCTCCAATGGTCAGTGTGTTCCCATCGAGTACAGGTGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 90 bp TGGCACATACCAGGAGGCCTGGTCGGACAGCCCGCCTCATCAGAGTaGTCCTTGCAATCGTACACCCCATCACAGCGGTACCTGCTATTA +
Preference number: 6 (lower is better)
Translates to: WHIPGGLVGQPASSE*SLQSYTPSQRYLLL
Trigger: TAATAGCAGGTACCGCTGTGATGGGGTGTACGATTGCAAGGACAACTCTGATGAGGCGGGCTGTCCGACCAGGCCTCCTGGTATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp GATGCAGGTGCCTTCGGCAGGACACAGGAAAAAGCCTaGACCGCAGGACCTGGGAGGACAGCCAATTTCATC +
Preference number: 6 (lower is better)
Translates to: DAGAFGRTQEKA*TAGPGRTANFI
Trigger: GATGAAATTGGCTGTCCTCCCAGGTCCTGCGGTTCAGGCTTTTTCCTGTGTCCTGCCGAAGGCACCTGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS TCA 72 bp TGGCACACATCGCCCATTGGCACAAGTGAAGGCTGTTaGTCGGCACGTGTGAAAGGCACAGACTGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: WHTSPIGTSEGC*SARVKGTDCGQ
Trigger: CTGCCCACAGTCTGTGCCTTTCACACGTGCCGATCAACAGCCTTCACTTGTGCCAATGGGCGATGTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GAGCACATGGGCATACAGAGTGTCCTGTCTCGAAGCTaGACGGTCTGGAAGTCATCGGGACACTCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: EHMGIQSVLSRS*TVWKSSGHSQV
Trigger: CACCTGCGAGTGTCCCGATGACTTCCAGACCGTTCAGCTTCGAGACAGGACACTCTGTATGCCCATGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GTCATCGGGACACTCGCAGGTGAATCCTCTCCCTCCTaGTTTGATGAGGCACAGGTGAGAACAGCCACCGTT +
Preference number: 6 (lower is better)
Translates to: VIGTLAGESSPS*FDEAQVRTATV
Trigger: AACGGTGGCTGTTCTCACCTGTGCCTCATCAAAGCAGGAGGGAGAGGATTCACCTGCGAGTGTCCCGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GCACCGATTCACAGCCTTGCTCGTCACTGTTGTCCCTaGAGTCGTCAAAACCATTGCACACTGCCCACTGCG +
Preference number: 6 (lower is better)
Translates to: APIHSLARHCCP*SRQNHCTLPTA
Trigger: CGCAGTGGGCAGTGTGCAATGGTTTTGACGACTGCAGGGACAACAGTGACGAGCAAGGCTGTGAATCGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GGCCAGCCAAGGTTCGCAGAAGCCAGAACACTGCGGTaGTCCCCATTCATCCAGGCAGACTCAATTTTAGGC +
Preference number: 6 (lower is better)
Translates to: GQPRFAEARTLR*SPFIQADSILG
Trigger: GCCTAAAATTGAGTCTGCCTGGATGAATGGGGAGCACCGCAGTGTTCTGGCTTCTGCGAACCTTGGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CCTCCTGGTCTCAGCAGGCAGAGGTGGCTACAGACCTaGTTGCAAGGGTTGGACACTGACTGGTTGTATCTC +
Preference number: 6 (lower is better)
Translates to: PPGLSRQRWLQT*LQGLDTDWLYL
Trigger: GAGATACAACCAGTCAGTGTCCAACCCTTGCAAGCAGGTCTGTAGCCACCTCTGCCTGCTGAGACCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GCATGGGGAAGGCATGGTGATGGGGAGTTCACTGGCTaGATCACACTCAACGGTGCTGCCAGTTACGAAGTC +
Preference number: 6 (lower is better)
Translates to: AWGRHGDGEFTG*ITLNGAASYEV
Trigger: GACTTCGTAACTGGCAGCACCGTTGAGTGTGATGCAGCCAGTGAACTCCCCATCACCATGCCTTCCCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CCGAGCGGTTGGGGAACGCTGTACATTACAACAGATTaGTTCCTCCCGTGCCACTTGTTGGCCTGCATGACC +
Preference number: 6 (lower is better)
Translates to: PSGWGTLYITTD*FLPCHLLACMT
Trigger: GGTCATGCAGGCCAACAAGTGGCACGGGAGGAACCAATCTGTTGTAATGTACAGCGTTCCCCAACCGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GCACATGGATTCGGGGAAGATGGTTGCCTGGAGGGATaGATGGCAATTATTCCGAGCGGTTGGGGAACGCTG +
Preference number: 6 (lower is better)
Translates to: AHGFGEDGCLEG*MAIIPSGWGTL
Trigger: CAGCGTTCCCCAACCGCTCGGAATAATTGCCATCCATCCCTCCAGGCAACCATCTTCCCCGAATCCATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TCGTTGGCCAGATACCAGCTGCCTTCGTGTGGACACTaGCACTCAGCTCCGTTTGGACCTGGAGCACAGATA +
Preference number: 6 (lower is better)
Translates to: SLARYQLPSCGH*HSAPFGPGAQI
Trigger: TATCTGTGCTCCAGGTCCAAACGGAGCTGAGTGCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CTTGTTATCGTTGGCCAGATACCAGCTGCCTTCGTGTaGACACTGGCACTCAGCTCCGTTTGGACCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LVIVGQIPAAFV*TLALSSVWTWS
Trigger: GCTCCAGGTCCAAACGGAGCTGAGTGCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGATAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GGGCACCTGTGTCCACCACACAGTACTTGTTATCGTTaGCCAGATACCAGCTGCCTTCGTGTGGACACTGGC +
Preference number: 6 (lower is better)
Translates to: GHLCPPHSTCYR*PDTSCLRVDTG
Trigger: GCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGATAACAAGTACTGTGTGGTGGACACAGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CGCGCAGTCTGCGTCGCCGTCACAGACCCAGTGTTGTaGAATGCACCTCCTGTTTGGAGGTCTGCTGTTTAT +
Preference number: 6 (lower is better)
Translates to: RAVCVAVTDPVL*NAPPVWRSAVY
Trigger: ATAAACAGCAGACCTCCAAACAGGAGGTGCATTCCACAACACTGGGTCTGTGACGGCGACGCAGACTGCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GCAAGTGGCAGAGGCACATGGATTCGGGGAAGATGGTaGCCTGGAGGGATGGATGGCAATTATTCCGAGCGG +
Preference number: 6 (lower is better)
Translates to: ASGRGTWIRGRW*PGGMDGNYSER
Trigger: CCGCTCGGAATAATTGCCATCCATCCCTCCAGGCAACCATCTTCCCCGAATCCATGTGCCTCTGCCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TTATATGGAGAACAGGAGCGACCATCGGGGCTGAGCTaGAACCCACTGGCACAGGCGCAGGAGAACATTCCG +
Preference number: 6 (lower is better)
Translates to: LYGEQERPSGLS*NPLAQAQENIP
Trigger: CGGAATGTTCTCCTGCGCCTGTGCCAGTGGGTTCAAGCTCAGCCCCGATGGTCGCTCCTGTTCTCCATATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp CGGGCACCTGTGTCCACCACACAGTACTTGTTATCGTaGGCCAGATACCAGCTGCCTTCGTGTGGACACTGG +
Preference number: 6 (lower is better)
Translates to: RAPVSTTQYLLS*ARYQLPSCGHW
Trigger: CCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGATAACAAGTACTGTGTGGTGGACACAGGTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp ACGGAGTCACACTGCCAGTACTCAGGGATGCAACGCTaGTTGGCACACTGCCACTCATTGGCTTCACACCGG +
Preference number: 6 (lower is better)
Translates to: TESHCQYSGMQR*LAHCHSLASHR
Trigger: CCGGTGTGAAGCCAATGAGTGGCAGTGTGCCAACAAGCGTTGCATCCCTGAGTACTGGCAGTGTGACTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp ATCCCCAGAAGGGTGACACGGCACCGATTCACAGCCTaGCTCGTCACTGTTGTCCCTGCAGTCGTCAAAACC +
Preference number: 6 (lower is better)
Translates to: IPRRVTRHRFTA*LVTVVPAVVKT
Trigger: GGTTTTGACGACTGCAGGGACAACAGTGACGAGCAAGGCTGTGAATCGGTGCCGTGTCACCCTTCTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ATTCCGCCTGGTACGGGCAGGCAGATCTGCTGGCAAGCATTTGGGTaGTTGCTACAGCCATTGGAAGAGTCAGCAGCATTGCGATGGTGG +
Preference number: 6 (lower is better)
Translates to: IPPGTGRQICWQAFG*LLQPLEESAALRWW
Trigger: CCACCATCGCAATGCTGCTGACTCTTCCAATGGCTGTAGCAACAACCCAAATGCTTGCCAGCAGATCTGCCTGCCCGTACCAGGCGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ATGAAAGAGTTATATGGAGAACAGGAGCGACCATCGGGGCTGAGCTaGAACCCACTGGCACAGGCGCAGGAGAACATTCCGCCTGGTACG +
Preference number: 6 (lower is better)
Translates to: MKELYGEQERPSGLS*NPLAQAQENIPPGT
Trigger: CGTACCAGGCGGAATGTTCTCCTGCGCCTGTGCCAGTGGGTTCAAGCTCAGCCCCGATGGTCGCTCCTGTTCTCCATATAACTCTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ACACCGGAAATCCCCAGAAGGGTGACACGGCACCGATTCACAGCCTaGCTCGTCACTGTTGTCCCTGCAGTCGTCAAAACCATTGCACAC +
Preference number: 6 (lower is better)
Translates to: TPEIPRRVTRHRFTA*LVTVVPAVVKTIAH
Trigger: GTGTGCAATGGTTTTGACGACTGCAGGGACAACAGTGACGAGCAAGGCTGTGAATCGGTGCCGTGTCACCCTTCTGGGGATTTCCGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp CTGACATGGTCACACCTGTACTCGATGGGAACACACTaGCCATTGGAGCACGTCAGCTGCTGGCTTGAGCAC +
Preference number: 6 (lower is better)
Translates to: LTWSHLYSMGTH*PLEHVSCWLEH
Trigger: GTGCTCAAGCCAGCAGCTGACGTGCTCCAATGGTCAGTGTGTTCCCATCGAGTACAGGTGTGACCATGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS TCA 72 bp TGGTCGTTACCAGGTCTTTCCGATTGCTACCATCCATaGAGGCTCTCTCCACCTTGGGTTGCCCAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: WSLPGLSDCYHP*RLSPPWVAQRG
Trigger: GCCTCTCTGGGCAACCCAAGGTGGAGAGAGCCTTCATGGATGGTAGCAATCGGAAAGACCTGGTAACGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp CTGGGTCACAAGCGCACCGGAAGGACCCTCTCATGTTaGCACAGTGCTGGCTGCAAAAGCCTGGAATATCAC +
Preference number: 6 (lower is better)
Translates to: LGHKRTGRTLSC*HSAGCKSLEYH
Trigger: GTGATATTCCAGGCTTTTGCAGCCAGCACTGTGTCAACATGAGAGGGTCCTTCCGGTGCGCTTGTGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GAGAGCCCTGTGACAGCACAGTGTAGTATACAACACTaGGGCCTATGCCCTCGGGGTCCCAGTCGTAGTCAA +
Preference number: 6 (lower is better)
Translates to: ESPVTAQCSIQH*GLCPRGPSRSQ
Trigger: TTGACTACGACTGGGACCCCGAGGGCATAGGCCTCAGTGTTGTATACTACACTGTGCTGTCACAGGGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp AGCCCTAGCTTAGGATTCACAGCAATGGCGGCTGGTTaGTCCAGTTGGGTGGTGATCAGCCACTTCCGGTAC +
Preference number: 6 (lower is better)
Translates to: SPSLGFTAMAAG*SSWVVISHFRY
Trigger: GTACCGGAAGTGGCTGATCACCACCCAACTGGATCAACCAGCCGCCATTGCTGTGAATCCTAAGCTAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CACAGCGGAAGATACTGGGCACACACTTGCCATTGTTaGAGGGAAAGGAAGAGGAGCCACACTGCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: HSGRYWAHTCHC*RERKRSHTAVW
Trigger: CCACACAGCAGTGTGGCTCCTCTTCCTTTCCCTGCAACAATGGCAAGTGTGTGCCCAGTATCTTCCGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 72 bp AGTCATCCACATGGTTACAGACAGTCCCCATCTCGATaGAGTGCCCGTTGTCACACCGGAACTGATGAGGGG +
Preference number: 6 (lower is better)
Translates to: SHPHGYRQSPSR*SARCHTGTDEG
Trigger: CCCCTCATCAGTTCCGGTGTGACAACGGGCACTGCATCGAGATGGGGACTGTCTGTAACCATGTGGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AGTCGTCCACGGAGTCACACTGCCAGTACTCAGGGATaGAACGCTTGTTGGCACACTGCCACTCATTGGCTT +
Preference number: 6 (lower is better)
Translates to: SRPRSHTASTQG*NACWHTATHWL
Trigger: AAGCCAATGAGTGGCAGTGTGCCAACAAGCGTTGCATCCCTGAGTACTGGCAGTGTGACTCCGTGGACGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GACCATTGGAGCACGTCAGCTGCTGGCTTGAGCACGTaGTCCCAGGGCAATTTTGCTGTTCATCTGCACCAT +
Preference number: 6 (lower is better)
Translates to: DHWSTSAAGLST*SQGNFAVHLHH
Trigger: ATGGTGCAGATGAACAGCAAAATTGCCCTGGGACCACGTGCTCAAGCCAGCAGCTGACGTGCTCCAATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 72 bp TCGTCCCCATCACAAACCCAGTTCTGGTTAATGCACTaGCCATTGGAGCAAGTGAACTGGTGGCCTCCGCAG +
Preference number: 6 (lower is better)
Translates to: SSPSQTQFWLMH*PLEQVNWWPPQ
Trigger: CTGCGGAGGCCACCAGTTCACTTGCTCCAATGGCCAGTGCATTAACCAGAACTGGGTTTGTGATGGGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 72 bp TCACAGCGCCACTGGCCAGGGATGCACTGTCCACCGTaGACACAAGTAAAAGCCGAAGATGAGCAGGTGTTA +
Preference number: 6 (lower is better)
Translates to: SQRHWPGMHCPP*TQVKAEDEQVL
Trigger: TAACACCTGCTCATCTTCGGCTTTTACTTGTGTCCACGGTGGACAGTGCATCCCTGGCCAGTGGCGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 72 bp AAGCAGGCAAAGATGGCTGCAAGTGGCAGAGGCACATaGATTCGGGGAAGATGGTTGCCTGGAGGGATGGAT +
Preference number: 6 (lower is better)
Translates to: KQAKMAASGRGT*IRGRWLPGGMD
Trigger: ATCCATCCCTCCAGGCAACCATCTTCCCCGAATCCATGTGCCTCTGCCACTTGCAGCCATCTTTGCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CTTGCAATCTTGGCAGGAACCCCACTGTCCGTCCCGTaGTCTGACCAATACAGTTTCCCACGTGCAGGATCA +
Preference number: 6 (lower is better)
Translates to: LAILAGTPLSVP*SDQYSFPRAGS
Trigger: TGATCCTGCACGTGGGAAACTGTATTGGTCAGACCACGGGACGGACAGTGGGGTTCCTGCCAAGATTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CCCGTTCTGACAAGTAAATTGATCATCTCGGCAGGGTaGGTACGAGCAGCCCCTCTCATCACTGTAGTCCCC +
Preference number: 6 (lower is better)
Translates to: PVLTSKLIISAG*VRAAPLITVVP
Trigger: GGGGACTACAGTGATGAGAGGGGCTGCTCGTACCCACCCTGCCGAGATGATCAATTTACTTGTCAGAACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CATTGTTGCCACACAGGAACTGCGTGCTGGAGCACATaGGCATACAGAGTGTCCTGTCTCGAAGCTGAACGG +
Preference number: 6 (lower is better)
Translates to: HCCHTGTACWST*AYRVSCLEAER
Trigger: CCGTTCAGCTTCGAGACAGGACACTCTGTATGCCCATGTGCTCCAGCACGCAGTTCCTGTGTGGCAACAATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TCCGAGCGGTTGGGGAACGCTGTACATTACAACAGATaGGTTCCTCCCGTGCCACTTGTTGGCCTGCATGAC +
Preference number: 6 (lower is better)
Translates to: SERLGNAVHYNR*VPPVPLVGLHD
Trigger: GTCATGCAGGCCAACAAGTGGCACGGGAGGAACCAATCTGTTGTAATGTACAGCGTTCCCCAACCGCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp CTTAGGATTCACAGCAATGGCGGCTGGTTGATCCAGTaGGGTGGTGATCAGCCACTTCCGGTACCTTCCGTC +
Preference number: 6 (lower is better)
Translates to: LRIHSNGGWLIQ*GGDQPLPVPSV
Trigger: GACGGAAGGTACCGGAAGTGGCTGATCACCACCCAACTGGATCAACCAGCCGCCATTGCTGTGAATCCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp CCTGGTCTCAGCAGGCAGAGGTGGCTACAGACCTGCTaGCAAGGGTTGGACACTGACTGGTTGTATCTCAGT +
Preference number: 6 (lower is better)
Translates to: PGLSRQRWLQTC*QGLDTDWLYLS
Trigger: ACTGAGATACAACCAGTCAGTGTCCAACCCTTGCAAGCAGGTCTGTAGCCACCTCTGCCTGCTGAGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ATACCAGGAGGCCTGGTCGGACAGCCCGCCTCATCAGAGTTGTCCTaGCAATCGTACACCCCATCACAGCGGTACCTGCTATTAATGCAA +
Preference number: 6 (lower is better)
Translates to: IPGGLVGQPASSELS*QSYTPSQRYLLLMQ
Trigger: TTGCATTAATAGCAGGTACCGCTGTGATGGGGTGTACGATTGCAAGGACAACTCTGATGAGGCGGGCTGTCCGACCAGGCCTCCTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp AACACGTGCTCCTCAAATAAGCTTATTCCAAACGGATaGGGGACGAGGGAGCCTCCACGCGCTACCGTCTTC +
Preference number: 6 (lower is better)
Translates to: NTCSSNKLIPNG*GTREPPRATVF
Trigger: GAAGACGGTAGCGCGTGGAGGCTCCCTCGTCCCTCATCCGTTTGGAATAAGCTTATTTGAGGAGCACGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp TCTGTGTCACAGACCCACTCTTTGGGGATACACATGTaGTTGTCGCAGGTGAAGGAGGTGGGCGGGCAAGTA +
Preference number: 6 (lower is better)
Translates to: SVSQTHSLGIHM*LSQVKEVGGQV
Trigger: TACTTGCCCGCCCACCTCCTTCACCTGCGACAATCACATGTGTATCCCCAAAGAGTGGGTCTGTGACACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp ATTGACACAGATGCTGTAGCCTGGGCACTGCCACTGTaGGCTAGGACAGTGAAAAGGCTGGGTAGGACAGTC +
Preference number: 6 (lower is better)
Translates to: IDTDAVAWALPL*ARTVKRLGRTV
Trigger: GACTGTCCTACCCAGCCTTTTCACTGTCCTAGCTCACAGTGGCAGTGCCCAGGCTACAGCATCTGTGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp CGTCCACATTTCCTCTTTCAATCACGCCTCTGCTGGTaGCCGCCCAGTAGAGCTTTTGCTCCTGGATGTCCA +
Preference number: 6 (lower is better)
Translates to: RPHFLFQSRLCW*PPSRAFAPGCP
Trigger: TGGACATCCAGGAGCAAAAGCTCTACTGGGCGGTCACCAGCAGAGGCGTGATTGAAAGAGGAAATGTGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GTGAATCCTCTCCCTCCTGCTTTGATGAGGCACAGGTaGGAACAGCCACCGTTGTTGGTAGCACAGGGATTG +
Preference number: 6 (lower is better)
Translates to: VNPLPPALMRHR*EQPPLLVAQGL
Trigger: CAATCCCTGTGCTACCAACAACGGTGGCTGTTCTCACCTGTGCCTCATCAAAGCAGGAGGGAGAGGATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp CTGTCCCAGACGGCAGAAGCGGTGTGGACACAGGTCTaGTTCATCAGAACCATCAGAGCAGTCTTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LSQTAEAVWTQV*FIRTIRAVFLS
Trigger: GGACAGAAAGACTGCTCTGATGGTTCTGATGAATCAGACCTGTGTCCACACCGCTTCTGCCGTCTGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TCTTGGTCACAGACCCATCGAGAGGGGATGCATTGCTaGTCAGCACATCGAAACTCGCTCTCTGTGCACTCC +
Preference number: 6 (lower is better)
Translates to: SWSQTHREGMHC*SAHRNSLSVHS
Trigger: GGAGTGCACAGAGAGCGAGTTTCGATGTGCTGATCAGCAATGCATCCCCTCTCGATGGGTCTGTGACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GCTCATCTGCATCCAGTTCAAAGCCAAATTCACACTTaGACCGGTAGCCCAGGCCGCCATTATCCGTCCTGT +
Preference number: 6 (lower is better)
Translates to: AHLHPVQSQIHT*TGSPGRHYPSC
Trigger: ACAGGACGGATAATGGCGGCCTGGGCTACCGGTGCAAGTGTGAATTTGGCTTTGAACTGGATGCAGATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 72 bp ACCAATACAGTTTCCCACGTGCAGGATCAACAGCTATaGCAACCGGGAAACCAACACCAAGCGGGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: TNTVSHVQDQQL*QPGNQHQAGCH
Trigger: ATGGCACCCCGCTTGGTGTTGGTTTCCCGGTTGGCATAGCTGTTGATCCTGCACGTGGGAAACTGTATTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CCACACAGTACTTGTTATCGTTGGCCAGATACCAGCTaGCTTCGTGTGGACACTGGCACTCAGCTCCGTTTG +
Preference number: 6 (lower is better)
Translates to: PHSTCYRWPDTS*LRVDTGTQLRL
Trigger: CAAACGGAGCTGAGTGCCAGTGTCCACACGAAGGCAGCTGGTATCTGGCCAACGATAACAAGTACTGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TCTGAATTATCCAGGCAGTCGTCCACGGAGTCACACTaGCAGTACTCAGGGATGCAACGCTTGTTGGCACAC +
Preference number: 6 (lower is better)
Translates to: SELSRQSSTESH*QYSGMQRLLAH
Trigger: GTGTGCCAACAAGCGTTGCATCCCTGAGTACTGGCAGTGTGACTCCGTGGACGACTGCCTGGATAATTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CTCAGGCAGGAGCAAGAGAGGAGGGCTTCCATCAGCTaGACACCGTTCTCCATAGTGGGTACTCATAGACTT +
Preference number: 6 (lower is better)
Translates to: LRQEQERRASIS*TPFSIVGTHRL
Trigger: AAGTCTATGAGTACCCACTATGGAGAACGGTGTGCAGCTGATGGAAGCCCTCCTCTCTTGCTCCTGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CTGAGAACTTCTCAGAGGAGATATTGTACTTCCGGATaGGGACGTTCTCAGGCAGGAGCAAGAGAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: LRTSQRRYCTSG*GRSQAGAREEG
Trigger: GCCCTCCTCTCTTGCTCCTGCCTGAGAACGTCCGCATCCGGAAGTACAATATCTCCTCTGAGAAGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CATTTGGCCAGCCAAGGTTCGCAGAAGCCAGAACACTaGGGTGCTCCCCATTCATCCAGGCAGACTCAATTT +
Preference number: 6 (lower is better)
Translates to: HLASQGSQKPEH*GAPHSSRQTQF
Trigger: AAATTGAGTCTGCCTGGATGAATGGGGAGCACCGCAGTGTTCTGGCTTCTGCGAACCTTGGCTGGCCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CGGCAGGACACAGGAAAAAGCCTGAACCGCAGGACCTaGGAGGACAGCCAATTTCATCAGTGTCATCCAAAC +
Preference number: 6 (lower is better)
Translates to: RQDTGKSLNRRT*EDSQFHQCHPN
Trigger: GTTTGGATGACACTGATGAAATTGGCTGTCCTCCCAGGTCCTGCGGTTCAGGCTTTTTCCTGTGTCCTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 72 bp CCATCTAGACAGTCATTCTGTTTGTCACAGCGCCACTaGCCAGGGATGCACTGTCCACCGTGGACACAAGTA +
Preference number: 6 (lower is better)
Translates to: PSRQSFCLSQRH*PGMHCPPWTQV
Trigger: TACTTGTGTCCACGGTGGACAGTGCATCCCTGGCCAGTGGCGCTGTGACAAACAGAATGACTGTCTAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 72 bp ATGGATTCGGGGAAGATGGTTGCCTGGAGGGATGGATaGCAATTATTCCGAGCGGTTGGGGAACGCTGTACA +
Preference number: 6 (lower is better)
Translates to: MDSGKMVAWRDG*QLFRAVGERCT
Trigger: TGTACAGCGTTCCCCAACCGCTCGGAATAATTGCCATCCATCCCTCCAGGCAACCATCTTCCCCGAATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TCTGCCCGTAGTCGGCCCAGAAGAGATATCTGTGCTTaGGGTCAACAACGATATGCCTGGGCATATCCACTG +
Preference number: 6 (lower is better)
Translates to: SARSRPRRDICA*GQQRYAWAYPL
Trigger: CAGTGGATATGCCCAGGCATATCGTTGTTGACCCCAAGCACAGATATCTCTTCTGGGCCGACTACGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp ACTCATTGCTGCGGCATGTGTGTGAGGCGCAGTAAATaGGGTTCTCGTCGCTCCCATCTCCACAGTCATTGT +
Preference number: 6 (lower is better)
Translates to: THCCGMCVRRSK*GSRRSHLHSHC
Trigger: ACAATGACTGTGGAGATGGGAGCGACGAGAACCCCATTTACTGCGCCTCACACACATGCCGCAGCAATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp AGTCACACTGCCAGTACTCAGGGATGCAACGCTTGTTaGCACACTGCCACTCATTGGCTTCACACCGGTGAT +
Preference number: 6 (lower is better)
Translates to: SHTASTQGCNAC*HTATHWLHTGD
Trigger: ATCACCGGTGTGAAGCCAATGAGTGGCAGTGTGCCAACAAGCGTTGCATCCCTGAGTACTGGCAGTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CCAGACAGTCTGCTCTCCCATCGCATGCCAACGCCTTaGGCACACAGTGTCCACTCGTACACTGAAAATGTT +
Preference number: 6 (lower is better)
Translates to: PDSLLSHRMPTP*AHSVHSYTENV
Trigger: AACATTTTCAGTGTACGAGTGGACACTGTGTGCCCAAGGCGTTGGCATGCGATGGGAGAGCAGACTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TACATTCGAACATGGCAGCTGGGCAGTAGGTACCATTaGGAAAGCGAGTCGGGCAAGCGGACTCATCAGAAG +
Preference number: 6 (lower is better)
Translates to: YIRTWQLGSRYH*ESESGKRTHQK
Trigger: CTTCTGATGAGTCCGCTTGCCCGACTCGCTTTCCCAATGGTACCTACTGCCCAGCTGCCATGTTCGAATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GGCCACCCCAATTTGGTCGTTACCAGGTCTTTCCGATaGCTACCATCCATGAAGGCTCTCTCCACCTTGGGT +
Preference number: 6 (lower is better)
Translates to: GHPNLVVTRSFR*LPSMKALSTLG
Trigger: ACCCAAGGTGGAGAGAGCCTTCATGGATGGTAGCAATCGGAAAGACCTGGTAACGACCAAATTGGGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 72 bp TCACAGCGGAAGATACTGGGCACACACTTGCCATTGTaGCAGGGAAAGGAAGAGGAGCCACACTGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: SQRKILGTHLPL*QGKEEEPHCCV
Trigger: CACACAGCAGTGTGGCTCCTCTTCCTTTCCCTGCAACAATGGCAAGTGTGTGCCCAGTATCTTCCGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 72 bp TCCACTCCATCACAGCGGAAGATACTGGGCACACACTaGCCATTGTTGCAGGGAAAGGAAGAGGAGCCACAC +
Preference number: 6 (lower is better)
Translates to: STPSQRKILGTH*PLLQGKEEEPH
Trigger: GTGTGGCTCCTCTTCCTTTCCCTGCAACAATGGCAAGTGTGTGCCCAGTATCTTCCGCTGTGATGGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 72 bp ACGGGCAGGCAGATCTGCTGGCAAGCATTTGGGTTGTaGCTACAGCCATTGGAAGAGTCAGCAGCATTGCGA +
Preference number: 6 (lower is better)
Translates to: TGRQICWQAFGL*LQPLEESAALR
Trigger: TCGCAATGCTGCTGACTCTTCCAATGGCTGTAGCAACAACCCAAATGCTTGCCAGCAGATCTGCCTGCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GGTACGGGCAGGCAGATCTGCTGGCAAGCATTTGGGTaGTTGCTACAGCCATTGGAAGAGTCAGCAGCATTG +
Preference number: 6 (lower is better)
Translates to: GTGRQICWQAFG*LLQPLEESAAL
Trigger: CAATGCTGCTGACTCTTCCAATGGCTGTAGCAACAACCCAAATGCTTGCCAGCAGATCTGCCTGCCCGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TGGCAATCATCCACTCCATCACAGCGGAAGATACTGGGCACACACTaGCCATTGTTGCAGGGAAAGGAAGAGGAGCCACACTGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: WQSSTPSQRKILGTH*PLLQGKEEEPHCCV
Trigger: CACACAGCAGTGTGGCTCCTCTTCCTTTCCCTGCAACAATGGCAAGTGTGTGCCCAGTATCTTCCGCTGTGATGGAGTGGATGATTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 90 bp GGCAATTATTCCGAGCGGTTGGGGAACGCTGTACATTACAACAGATaGGTTCCTCCCGTGCCACTTGTTGGCCTGCATGACCTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: GNYSERLGNAVHYNR*VPPVPLVGLHDLVS
Trigger: ACTCACCAGGTCATGCAGGCCAACAAGTGGCACGGGAGGAACCAATCTGTTGTAATGTACAGCGTTCCCCAACCGCTCGGAATAATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TCCTCTTTCAATCACGCCTCTGCTGGTGACCGCCCAGTAGAGCTTTaGCTCCTGGATGTCCAGGGTGACAACCTCCAGATGTTCCATGTT +
Preference number: 6 (lower is better)
Translates to: SSFNHASAGDRPVEL*LLDVQGDNLQMFHV
Trigger: AACATGGAACATCTGGAGGTTGTCACCCTGGACATCCAGGAGCAAAAGCTCTACTGGGCGGTCACCAGCAGAGGCGTGATTGAAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TCAGCTCCGTTTGGACCTGGAGCACAGATATGGCTGCATCCTCCATaGAACTGGTCACAAGGATTGCTACACTGCTGCTGCTGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SAPFGPGAQIWLHPP*NWSQGLLHCCCWVL
Trigger: CAAGACCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATGCAGCCATATCTGTGCTCCAGGTCCAAACGGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp CTCCACCTTGGGTTGCCCAGAGAGGCTTCCCCAATCTaGGAAAAACAAATAGCCCACAGTTGGATCAAGGGC +
Preference number: 6 (lower is better)
Translates to: LHLGLPREASPI*EKQIAHSWIKG
Trigger: GCCCTTGATCCAACTGTGGGCTATTTGTTTTTCTCAGATTGGGGAAGCCTCTCTGGGCAACCCAAGGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp CCACCCAGTAAACTCGCTTGGATACAAGATCCAGAGTaGTCCCAGCAGGCCACCCCAATTTGGTCGTTACCA +
Preference number: 6 (lower is better)
Translates to: PPSKLAWIQDPE*SQQATPIWSLP
Trigger: TGGTAACGACCAAATTGGGGTGGCCTGCTGGGATCACTCTGGATCTTGTATCCAAGCGAGTTTACTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp ACGCAGGTGGCTCCAAAGGGCCCTTGTATGCACCGGTaGGTACAGCCACCATTAAAATGTAAGCAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: TQVAPKGPCMHR*VQPPLKCKQLS
Trigger: AGACAGCTGCTTACATTTTAATGGTGGCTGTACTCACCGGTGCATACAAGGGCCCTTTGGAGCCACCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp ATTTCGTCCTTGGCCAGCCACTGGCACCATGGCCTCTaGGTGATCAGACAACTCCAAGCTAAAGCCTCTAAC +
Preference number: 6 (lower is better)
Translates to: ISSLASHWHHGL*VIRQLQAKASN
Trigger: GTTAGAGGCTTTAGCTTGGAGTTGTCTGATCACTCAGAGGCCATGGTGCCAGTGGCTGGCCAAGGACGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GAGATACAACGCCCATTAAGGCAGGTGAACTGGAACTaGTTACAGCGGGCACCTGTGTCCACCACACAGTAC +
Preference number: 6 (lower is better)
Translates to: EIQRPLRQVNWN*LQRAPVSTTQY
Trigger: GTACTGTGTGGTGGACACAGGTGCCCGCTGTAATCAGTTCCAGTTCACCTGCCTTAATGGGCGTTGTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GTAGTCCCCACAGTCGTTGCGCCTATCACACCTGAATaGCTGCCTGATACACCGTCCATTTGCACAGCTGAA +
Preference number: 6 (lower is better)
Translates to: VVPTVVAPITPE*LPDTPSICTAE
Trigger: TTCAGCTGTGCAAATGGACGGTGTATCAGGCAGTCATTCAGGTGTGATAGGCGCAACGACTGTGGGGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GCCAACGCCTTGGGCACACAGTGTCCACTCGTACACTaGAAATGTTCAGGATGGCACGTCTTCATCTCACAG +
Preference number: 6 (lower is better)
Translates to: ANALGTQCPLVH*KCSGWHVFISQ
Trigger: CTGTGAGATGAAGACGTGCCATCCTGAACATTTTCAGTGTACGAGTGGACACTGTGTGCCCAAGGCGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AGCTGCTGGCTTGAGCACGTGGTCCCAGGGCAATTTTaGTGTTCATCTGCACCATCGGAACAATCCTTATCC +
Preference number: 6 (lower is better)
Translates to: SCWLEHVVPGQF*CSSAPSEQSLS
Trigger: GGATAAGGATTGTTCCGATGGTGCAGATGAACAGCAAAATTGCCCTGGGACCACGTGCTCAAGCCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS GCA 72 bp ACGACGGTGAACGAGTGGGGCAGTTTTGCTCATCACTaGCATCTAGACAGTCATTCTGTTTGTCACAGCGCC +
Preference number: 6 (lower is better)
Translates to: TTVNEWGSFAHH*HLDSHSVCHSA
Trigger: GGCGCTGTGACAAACAGAATGACTGTCTAGATGGCAGTGATGAGCAAAACTGCCCCACTCGTTCACCGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 72 bp CCAGCAGAGACAGAGGAGCAAACGCTGTCCTGTTGCTaGCATCGGTCTTCACTCTGTGAATTTCACCTGGAT +
Preference number: 6 (lower is better)
Translates to: PAETEEQTLSCC*HRSSLCEFHLD
Trigger: ATCCAGGTGAAATTCACAGAGTGAAGACCGATGGCAGCAACAGGACAGCGTTTGCTCCTCTGTCTCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AGTCATCAATGCCGTCACATTTCCAGCGGAGAGGGATaGAGTGGTGATTTCCACACCGGAAATCCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: SHQCRHISSGEG*SGDFHTGNPQK
Trigger: CTTCTGGGGATTTCCGGTGTGGAAATCACCACTGCATCCCTCTCCGCTGGAAATGTGACGGCATTGATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TGCTCCCCATTCATCCAGGCAGACTCAATTTTAGGCTaGTTTCCCTGGTCAGTCCAGAACATGAGCCCTAGC +
Preference number: 6 (lower is better)
Translates to: CSPFIQADSILG*FPWSVQNMSPS
Trigger: GCTAGGGCTCATGTTCTGGACTGACCAGGGAAAGCAGCCTAAAATTGAGTCTGCCTGGATGAATGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CAAGGGTTATTGTTAAGCTCTGCCGGTGAGAGGGGCTaGACATGCTCATCAAAGATGGTCACATCCCGTAGC +
Preference number: 6 (lower is better)
Translates to: QGLLLSSAGERG*TCSSKMVTSRS
Trigger: GCTACGGGATGTGACCATCTTTGATGAGCATGTCCAGCCCCTCTCACCGGCAGAGCTTAACAATAACCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TTGAACTGGTCACAAGGATTGCTACACTGCTGCTGCTaGGTCTTGACAACTGTGGAGATGCCACTAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LNWSQGLLHCCC*VLTTVEMPLGW
Trigger: CCAGCCTAGTGGCATCTCCACAGTTGTCAAGACCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TGGCACTCAGCTCCGTTTGGACCTGGAGCACAGATATaGCTGCATCCTCCATTGAACTGGTCACAAGGATTG +
Preference number: 6 (lower is better)
Translates to: WHSAPFGPGAQI*LHPPLNWSQGL
Trigger: CAATCCTTGTGACCAGTTCAATGGAGGATGCAGCCATATCTGTGCTCCAGGTCCAAACGGAGCTGAGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CTCAATGTTGCTATTCTGCCGGCAGCTCTTCCCATCTaGCTCACGGATGTAGCCAGGGGCACACTTACAAAT +
Preference number: 6 (lower is better)
Translates to: LNVAILPAALPI*LTDVARGTLTN
Trigger: ATTTGTAAGTGTGCCCCTGGCTACATCCGTGAGCCAGATGGGAAGAGCTGCCGGCAGAATAGCAACATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp CAGAGACCCGTACCACAGTATCGTCCACTTGTGGCATaGTTCTCATCCTCTCCTTCTGGACAGTCGGGAACT +
Preference number: 6 (lower is better)
Translates to: QRPVPQYRPLVA*FSSSPSGQSGT
Trigger: AGTTCCCGACTGTCCAGAAGGAGAGGATGAGAACAATGCCACAAGTGGACGATACTGTGGTACGGGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 72 bp TTCCGATTGCTACCATCCATGAAGGCTCTCTCCACCTaGGGTTGCCCAGAGAGGCTTCCCCAATCTGAGAAA +
Preference number: 6 (lower is better)
Translates to: FRLLPSMKALST*GCPERLPQSEK
Trigger: TTTCTCAGATTGGGGAAGCCTCTCTGGGCAACCCAAGGTGGAGAGAGCCTTCATGGATGGTAGCAATCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 72 bp ACAAGATCCAGAGTGATCCCAGCAGGCCACCCCAATTaGGTCGTTACCAGGTCTTTCCGATTGCTACCATCC +
Preference number: 6 (lower is better)
Translates to: TRSRVIPAGHPN*VVTRSFRLLPS
Trigger: GGATGGTAGCAATCGGAAAGACCTGGTAACGACCAAATTGGGGTGGCCTGCTGGGATCACTCTGGATCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 72 bp TACAACCGGGAAGTACTCCAATCGATGGCCAAGCCATaGGGCCACCCCAGACTAGTGTTGACTATGGGCATT +
Preference number: 6 (lower is better)
Translates to: YNREVLQSMAKP*GHPRLVLTMGI
Trigger: AATGCCCATAGTCAACACTAGTCTGGGGTGGCCCAATGGCTTGGCCATCGATTGGAGTACTTCCCGGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 72 bp TCCTATTGGACACACGCAGGTGGCTCCAAAGGGCCCTaGTATGCACCGGTGAGTACAGCCACCATTAAAATG +
Preference number: 6 (lower is better)
Translates to: SYWTHAGGSKGP*YAPVSTATIKM
Trigger: CATTTTAATGGTGGCTGTACTCACCGGTGCATACAAGGGCCCTTTGGAGCCACCTGCGTGTGTCCAATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TGGGAACACCCACCATTGCTTTGCAAACAAGGGTTATaGTTAAGCTCTGCCGGTGAGAGGGGCTGGACATGC +
Preference number: 6 (lower is better)
Translates to: WEHPPLLCKQGL*LSSAGERGWTC
Trigger: GCATGTCCAGCCCCTCTCACCGGCAGAGCTTAACAATAACCCTTGTTTGCAAAGCAATGGTGGGTGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TGCCGGTATGGATGTAACACGTGGATGTCAAAGGGTTaGTGGGTTGTGTTCACCAGCACGACTCGCCCTGAT +
Preference number: 6 (lower is better)
Translates to: CRYGCNTWMSKG*WVVFTSTTRPD
Trigger: ATCAGGGCGAGTCGTGCTGGTGAACACAACCCACAAACCCTTTGACATCCACGTGTTACATCCATACCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TCTCTGGTCCCATCACACCTCCAGGATGCAGGGATACAGTATCCGTaGTCACAGCGAAAATTCCCACTGCCACATTCTTGGCCACTGACT +
Preference number: 6 (lower is better)
Translates to: SLVPSHLQDAGIQYP*SQRKFPLPHSWPLT
Trigger: AGTCAGTGGCCAAGAATGTGGCAGTGGGAATTTTCGCTGTGACAACGGATACTGTATCCCTGCATCCTGGAGGTGTGATGGGACCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 90 bp CCTCTCCTTCTGGACAGTCGGGAACTCCATCACAAACTTTATCCATaGAGATGCATCGTCCAGACCCAGGACACGCCCATTCTCTTGGGT +
Preference number: 6 (lower is better)
Translates to: PLLLDSRELHHKLYP*RCIVQTQDTPILLG
Trigger: ACCCAAGAGAATGGGCGTGTCCTGGGTCTGGACGATGCATCTCAATGGATAAAGTTTGTGATGGAGTTCCCGACTGTCCAGAAGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 90 bp CGCTTGGATACAAGATCCAGAGTGATCCCAGCAGGCCACCCCAATTaGGTCGTTACCAGGTCTTTCCGATTGCTACCATCCATGAAGGCT +
Preference number: 6 (lower is better)
Translates to: RLDTRSRVIPAGHPN*VVTRSFRLLPSMKA
Trigger: AGCCTTCATGGATGGTAGCAATCGGAAAGACCTGGTAACGACCAAATTGGGGTGGCCTGCTGGGATCACTCTGGATCTTGTATCCAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 90 bp GGAGCACAGATATGGCTGCATCCTCCATTGAACTGGTCACAAGGATaGCTACACTGCTGCTGCTGGGTCTTGACAACTGTGGAGATGCCA +
Preference number: 6 (lower is better)
Translates to: GAQIWLHPPLNWSQG*LHCCCWVLTTVEMP
Trigger: TGGCATCTCCACAGTTGTCAAGACCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATGCAGCCATATCTGTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp GTAAACTGTCACTCCGAAAGGCGTCAGGGAAGACTGGTGGTACACTaGAGGGTTGGTGTCTGTGAACTTGTTTGCCTTCATCACCGCCAT +
Preference number: 6 (lower is better)
Translates to: VNCHSERRQGRLVVH*RVGVCELVCLHHRH
Trigger: ATGGCGGTGATGAAGGCAAACAAGTTCACAGACACCAACCCTCAAGTGTACCACCAGTCTTCCCTGACGCCTTTCGGAGTGACAGTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 90 bp ACTGACGGTCCCTGCACTGCCAGGCCCACTTTGGAAGTACTGTCTTaGGCTGCATACATTGGGTTTTCAAATATCACAGGCTGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: TDGPCTARPTLEVLS*AAYIGFSNITGCLP
Trigger: AGGCAAGCAGCCTGTGATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGTGCAGGGACCGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TGGACAGTCGGGAACTCCATCACAAACTTTATCCATTaGGATGCATCGTCCAGACCCAGGACACGCCCATTC +
Preference number: 6 (lower is better)
Translates to: WTVGNSITNFIH*DASSRPRTRPF
Trigger: GAATGGGCGTGTCCTGGGTCTGGACGATGCATCTCAATGGATAAAGTTTGTGATGGAGTTCCCGACTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS TCA 72 bp GGGAAGACTGGTGGTACACTTGAGGGTTGGTGTCTGTaGACTTGTTTGCCTTCATCACCGCCATCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: GKTGGTLEGWCL*TCLPSSPPSLS
Trigger: GGACAAAGATGGCGGTGATGAAGGCAAACAAGTTCACAGACACCAACCCTCAAGTGTACCACCAGTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp ACTCCGAAAGGCGTCAGGGAAGACTGGTGGTACACTTaGGGGTTGGTGTCTGTGAACTTGTTTGCCTTCATC +
Preference number: 6 (lower is better)
Translates to: TPKGVREDWWYT*GLVSVNLFAFI
Trigger: GATGAAGGCAAACAAGTTCACAGACACCAACCCTCAAGTGTACCACCAGTCTTCCCTGACGCCTTTCGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp GGTCAGCATCGTACGCTTTCACGTGCATTATGCTGCTaGTGCCACGTCGAACAACGGTCATATCACCACCAT +
Preference number: 6 (lower is better)
Translates to: GQHRTLSRALCC*CHVEQRSYHHH
Trigger: ATGGTGGTGATATGACCGTTGTTCGACGTGGCATCAGCAGCATAATGCACGTGAAAGCGTACGATGCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp CTTGGGGTCAACAACGATATGCCTGGGCATATCCACTaGGACTTTGAGGAGGACACGGCGGTATGTGGTATT +
Preference number: 6 (lower is better)
Translates to: LGVNNDMPGHIH*DFEEDTAVCGI
Trigger: AATACCACATACCGCCGTGTCCTCCTCAAAGTCTCAGTGGATATGCCCAGGCATATCGTTGTTGACCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TTGGACCTGGAGCACAGATATGGCTGCATCCTCCATTaGACTGGTCACAAGGATTGCTACACTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LDLEHRYGCILH*TGHKDCYTAAA
Trigger: AGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATGCAGCCATATCTGTGCTCCAGGTCCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GATAATGGTATGGCACACATCGCCCATTGGCACAAGTaGAGGCTGTTGATCGGCACGTGTGAAAGGCACAGA +
Preference number: 6 (lower is better)
Translates to: DNGMAHIAHWHK*RLLIGTCERHR
Trigger: TCTGTGCCTTTCACACGTGCCGATCAACAGCCTTCACTTGTGCCAATGGGCGATGTGTGCCATACCATTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TGTAGCCAGGGGCACACTTACAAATGTAGGAGCCTATaGCATTCTCACACTTCTGGCTACAGAGCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: CSQGHTYKCRSL*HSHTSGYRAGV
Trigger: CACCCCAGCTCTGTAGCCAGAAGTGTGAGAATGTCATAGGCTCCTACATTTGTAAGTGTGCCCCTGGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TGCTACCAGATTCAAAGTCGGGAAGGTAGGCACGTTTaGTTGCACCGAATTGAGAGCCCTGTGACAGCACAG +
Preference number: 6 (lower is better)
Translates to: CYQIQSREGRHV*LHRIESPVTAQ
Trigger: CTGTGCTGTCACAGGGCTCTCAATTCGGTGCAATCAAACGTGCCTACCTTCCCGACTTTGAATCTGGTAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp ATCAACCCAATAAATATAGCCAGTGTCATGGTCCACTaGCAGGCCCCGAGGGGTGACAATGCCTTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: INPINIASVMVH*QAPRGDNAFRN
Trigger: GTTTCTGAAGGCATTGTCACCCCTCGGGGCCTGGCAGTGGACCATGACACTGGCTATATTTATTGGGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CATCCTCCATTGAACTGGTCACAAGGATTGCTACACTaGTGCTGCTGGGTCTTGACAACTGTGGAGATGCCA +
Preference number: 6 (lower is better)
Translates to: HPPLNWSQGLLH*CCWVLTTVEMP
Trigger: TGGCATCTCCACAGTTGTCAAGACCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TATCACCATCACAGACCCAGCTACTTGAGATGCACCTaGCGTTATCACAGTGGAACTGATTGGCTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: YHHHRPSYLRCT*RYHSGTDWLSS
Trigger: GCTGCTCAGCCAATCAGTTCCACTGTGATAACGGCAGGTGCATCTCAAGTAGCTGGGTCTGTGATGGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TCTCACACTTCTGGCTACAGAGCTGGGGTGTCTCCTTaGACTCGTCAATATCCACGCAAGTACGTTTGTCAG +
Preference number: 6 (lower is better)
Translates to: SHTSGYRAGVSP*TRQYPRKYVCQ
Trigger: CTGACAAACGTACTTGCGTGGATATTGACGAGTGCAAGGAGACACCCCAGCTCTGTAGCCAGAAGTGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GGATACACTTTTCATTGTTGCCACACAGGAACTGCGTaGTGGAGCACATGGGCATACAGAGTGTCCTGTCTC +
Preference number: 6 (lower is better)
Translates to: GYTFHCCHTGTA*WSTWAYRVSCL
Trigger: GAGACAGGACACTCTGTATGCCCATGTGCTCCAGCACGCAGTTCCTGTGTGGCAACAATGAAAAGTGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp ACTGTTGTCCCTGCAGTCGTCAAAACCATTGCACACTaGCCACTGCGGGATGCAGCGGTAATTAGTTTTGCA +
Preference number: 6 (lower is better)
Translates to: TVVPAVVKTIAH*PLRDAAVISFA
Trigger: TGCAAAACTAATTACCGCTGCATCCCGCAGTGGGCAGTGTGCAATGGTTTTGACGACTGCAGGGACAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp ATTTCAGGCCCAGGTCAACTTCACGGACGGGATTGTTaGTACCAGATTCAAAGTCGGGAAGGTAGGCACGTT +
Preference number: 6 (lower is better)
Translates to: ISGPGQLHGRDC*YQIQSREGRHV
Trigger: AACGTGCCTACCTTCCCGACTTTGAATCTGGTAGCAACAATCCCGTCCGTGAAGTTGACCTGGGCCTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TGCCTTCCAACCCAGTCCACGGCTAATCCATCTGGCTaGATTAAATATTTCAGGCCCAGGTCAACTTCACGG +
Preference number: 6 (lower is better)
Translates to: CLPTQSTANPSG*IKYFRPRSTSR
Trigger: CCGTGAAGTTGACCTGGGCCTGAAATATTTAATGCAGCCAGATGGATTAGCCGTGGACTGGGTTGGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CATGGCAATCATCCACTCCATCACAGCGGAAGATACTaGGCACACACTTGCCATTGTTGCAGGGAAAGGAAG +
Preference number: 6 (lower is better)
Translates to: HGNHPLHHSGRY*AHTCHCCRERK
Trigger: CTTCCTTTCCCTGCAACAATGGCAAGTGTGTGCCCAGTATCTTCCGCTGTGATGGAGTGGATGATTGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 72 bp GCGCACCGGAAGGACCCTCTCATGTTGACACAGTGCTaGCTGCAAAAGCCTGGAATATCACACTCATTTACA +
Preference number: 6 (lower is better)
Translates to: AHRKDPLMLTQC*LQKPGISHSFT
Trigger: TGTAAATGAGTGTGATATTCCAGGCTTTTGCAGCCAGCACTGTGTCAACATGAGAGGGTCCTTCCGGTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TCTGCTGGCAAGCATTTGGGTTGTTGCTACAGCCATTaGAAGAGTCAGCAGCATTGCGATGGTGGTAAACCC +
Preference number: 6 (lower is better)
Translates to: SAGKHLGCCYSH*KSQQHCDGGKP
Trigger: GGGTTTACCACCATCGCAATGCTGCTGACTCTTCCAATGGCTGTAGCAACAACCCAAATGCTTGCCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GAGCCTATGACATTCTCACACTTCTGGCTACAGAGCTaGGGTGTCTCCTTGCACTCGTCAATATCCACGCAA +
Preference number: 6 (lower is better)
Translates to: EPMTFSHFWLQS*GVSLHSSISTQ
Trigger: TTGCGTGGATATTGACGAGTGCAAGGAGACACCCCAGCTCTGTAGCCAGAAGTGTGAGAATGTCATAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp CCATCACACCTCCAGGATGCAGGGATACAGTATCCGTaGTCACAGCGAAAATTCCCACTGCCACATTCTTGG +
Preference number: 6 (lower is better)
Translates to: PSHLQDAGIQYP*SQRKFPLPHSW
Trigger: CCAAGAATGTGGCAGTGGGAATTTTCGCTGTGACAACGGATACTGTATCCCTGCATCCTGGAGGTGTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 72 bp CTGGACAGTCGGGAACTCCATCACAAACTTTATCCATaGAGATGCATCGTCCAGACCCAGGACACGCCCATT +
Preference number: 6 (lower is better)
Translates to: LDSRELHHKLYP*RCIVQTQDTPI
Trigger: AATGGGCGTGTCCTGGGTCTGGACGATGCATCTCAATGGATAAAGTTTGTGATGGAGTTCCCGACTGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 72 bp CACTCCGAAAGGCGTCAGGGAAGACTGGTGGTACACTaGAGGGTTGGTGTCTGTGAACTTGTTTGCCTTCAT +
Preference number: 6 (lower is better)
Translates to: HSERRQGRLVVH*RVGVCELVCLH
Trigger: ATGAAGGCAAACAAGTTCACAGACACCAACCCTCAAGTGTACCACCAGTCTTCCCTGACGCCTTTCGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CAA 72 bp CACAGGTCTTGGTATCATTGGCAAGTTGGTATCCTATaGGACACACGCAGGTGGCTCCAAAGGGCCCTTGTA +
Preference number: 6 (lower is better)
Translates to: HRSWYHWQVGIL*DTRRWLQRALV
Trigger: TACAAGGGCCCTTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GTCCAGTGCGATGGCCATTCCTTCCACACTTATCGCTaGGAAAGGCAGGTTATGGTCTTGAGGGTCAAAGTG +
Preference number: 6 (lower is better)
Translates to: VQCDGHSFHTYR*ERQVMVLRVKV
Trigger: CACTTTGACCCTCAAGACCATAACCTGCCTTTCCAAGCGATAAGTGTGGAAGGAATGGCCATCGCACTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TTTGGACCTGGAGCACAGATATGGCTGCATCCTCCATaGAACTGGTCACAAGGATTGCTACACTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FGPGAQIWLHPP*NWSQGLLHCCC
Trigger: GCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATGCAGCCATATCTGTGCTCCAGGTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GAGCTTAGTGATACATTGCCCGTTCTGACAAGTAAATaGATCATCTCGGCAGGGTGGGTACGAGCAGCCCCT +
Preference number: 6 (lower is better)
Translates to: ELSDTLPVLTSK*IISAGWVRAAP
Trigger: AGGGGCTGCTCGTACCCACCCTGCCGAGATGATCAATTTACTTGTCAGAACGGGCAATGTATCACTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GATCTGAAAGTCACCCCGTTTCCATTTTCAGAGGGTTaGGCAAGGCTGCTTAAGCTTGGCAGCTTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: DLKVTPFPFSEG*ARLLKLGSLGR
Trigger: TCTGCCCAAGCTGCCAAGCTTAAGCAGCCTTGCCAAACCCTCTGAAAATGGAAACGGGGTGACTTTCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp AGGAGATGGAGGGGGAGCCACAGCCACAGCTTCCTTTaGCTCAGTGTCCATCTCTGCATAGATTGGATTTTC +
Preference number: 6 (lower is better)
Translates to: RRWRGSHSHSFL*LSVHLCIDWIF
Trigger: GAAAATCCAATCTATGCAGAGATGGACACTGAGCAAAAGGAAGCTGTGGCTGTGGCTCCCCCTCCATCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TTACATCTTCACAGGTCTTGGTATCATTGGCAAGTTGGTATCCTATaGGACACACGCAGGTGGCTCCAAAGGGCCCTTGTATGCACCGGT +
Preference number: 6 (lower is better)
Translates to: LHLHRSWYHWQVGIL*DTRRWLQRALVCTG
Trigger: ACCGGTGCATACAAGGGCCCTTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TGCTTGGGGTCAACAACGATATGCCTGGGCATATCCACTGAGACTTaGAGGAGGACACGGCGGTATGTGGTATTGATCCGTATCACTTCT +
Preference number: 6 (lower is better)
Translates to: CLGSTTICLGISTET*RRTRRYVVLIRITS
Trigger: AGAAGTGATACGGATCAATACCACATACCGCCGTGTCCTCCTCAAAGTCTCAGTGGATATGCCCAGGCATATCGTTGTTGACCCCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ATAATCGGCTGCCGGTATGGATGTAACACGTGGATGTCAAAGGGTTaGTGGGTTGTGTTCACCAGCACGACTCGCCCTGATCCATCATAT +
Preference number: 6 (lower is better)
Translates to: IIGCRYGCNTWMSKG*WVVFTSTTRPDPSY
Trigger: ATATGATGGATCAGGGCGAGTCGTGCTGGTGAACACAACCCACAAACCCTTTGACATCCACGTGTTACATCCATACCGGCAGCCGATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TCCAATAGATTCGATCACCATTCAGGTAATCTATGGAAAGACCATTaGGCCAGCCAAGGTTCGCAGAAGCCAGAACACTGCGGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: SNRFDHHSGNLWKDH*ASQGSQKPEHCGAP
Trigger: GGGAGCACCGCAGTGTTCTGGCTTCTGCGAACCTTGGCTGGCCAAATGGTCTTTCCATAGATTACCTGAATGGTGATCGAATCTATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp GTCACCTGTGAGCTTACTGACGGTCCCTGCACTGCCAGGCCCACTTaGGAAGTACTGTCTTTGGCTGCATACATTGGGTTTTCAAATATC +
Preference number: 6 (lower is better)
Translates to: VTCELTDGPCTARPT*EVLSLAAYIGFSNI
Trigger: GATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGTGCAGGGACCGTCAGTAAGCTCACAGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TCCATTTTGTGCCCTGAGTTTCATCAGCTCCAGGGGAGGCTGGCTTaGGCTCTGGAACTATCTCAGAAGGATCTATGGACCTTCCATAGT +
Preference number: 6 (lower is better)
Translates to: SILCPEFHQLQGRLA*ALELSQKDLWTFHS
Trigger: ACTATGGAAGGTCCATAGATCCTTCTGAGATAGTTCCAGAGCCAAAGCCAGCCTCCCCTGGAGCTGATGAAACTCAGGGCACAAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp AGGAAGAGAAGGAGATGGAGGGGGAGCCACAGCCACAGCTTCCTTTaGCTCAGTGTCCATCTCTGCATAGATTGGATTTTCGAAGTTCGT +
Preference number: 6 (lower is better)
Translates to: RKRRRWRGSHSHSFL*LSVHLCIDWIFEVR
Trigger: ACGAACTTCGAAAATCCAATCTATGCAGAGATGGACACTGAGCAAAAGGAAGCTGTGGCTGTGGCTCCCCCTCCATCTCCTTCTCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GGCCACCCCAGACTAGTGTTGACTATGGGCATTAGGTaGGATCCATCGCTCCATGCTCTCATAATCTTTGCA +
Preference number: 6 (lower is better)
Translates to: GHPRLVLTMGIR*DPSLHALIIFA
Trigger: TGCAAAGATTATGAGAGCATGGAGCGATGGATCTCACCTAATGCCCATAGTCAACACTAGTCTGGGGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp GCTTTGCAAACAAGGGTTATTGTTAAGCTCTGCCGGTaGGAGGGGCTGGACATGCTCATCAAAGATGGTCAC +
Preference number: 6 (lower is better)
Translates to: ALQTRVIVKLCR*EGLDMLIKDGH
Trigger: GTGACCATCTTTGATGAGCATGTCCAGCCCCTCTCACCGGCAGAGCTTAACAATAACCCTTGTTTGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GGGTTTGTGGGTTGTGTTCACCAGCACGACTCGCCCTaGTCCATCATATTTGTTTCCCTTTTCAACTGTCCG +
Preference number: 6 (lower is better)
Translates to: GFVGCVHQHDSP*SIIFVSLFNCP
Trigger: CGGACAGTTGAAAAGGGAAACAAATATGATGGATCAGGGCGAGTCGTGCTGGTGAACACAACCCACAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TTCTGTGGCAGTGTAGCCTGGAGTCGAACTTCTTTTTaGAGCTTTAGCAGGAAGAGAAGGAGATGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: FCGSVAWSRTSF*SFSRKRRRWRG
Trigger: CCCCCTCCATCTCCTTCTCTTCCTGCTAAAGCTTCAAAAAGAAGTTCGACTCCAGGCTACACTGCCACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AGTCGGGAACTCCATCACAAACTTTATCCATTGAGATaGATCGTCCAGACCCAGGACACGCCCATTCTCTTG +
Preference number: 6 (lower is better)
Translates to: SRELHHKLYPLR*IVQTQDTPILL
Trigger: CAAGAGAATGGGCGTGTCCTGGGTCTGGACGATGCATCTCAATGGATAAAGTTTGTGATGGAGTTCCCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS GCA 72 bp TTATTGTTAAGCTCTGCCGGTGAGAGGGGCTGGACATaGTCATCAAAGATGGTCACATCCCGTAGCAAGTTG +
Preference number: 6 (lower is better)
Translates to: LLLSSAGERGWT*SSKMVTSRSKL
Trigger: CAACTTGCTACGGGATGTGACCATCTTTGATGAGCATGTCCAGCCCCTCTCACCGGCAGAGCTTAACAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TGCATTGCTGATCAGCACATCGAAACTCGCTCTCTGTaGACTCCCGAGGAACACAACTTTCCTCATCTGAGT +
Preference number: 6 (lower is better)
Translates to: CIADQHIETRSL*TPEEHNFPHLS
Trigger: ACTCAGATGAGGAAAGTTGTGTTCCTCGGGAGTGCACAGAGAGCGAGTTTCGATGTGCTGATCAGCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AGTCATTTTCTTGGTCACAGACCCATCGAGAGGGGATaGATTGCTGATCAGCACATCGAAACTCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SHFLGHRPIERG*IADQHIETRSL
Trigger: CAGAGAGCGAGTTTCGATGTGCTGATCAGCAATGCATCCCCTCTCGATGGGTCTGTGACCAAGAAAATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AATTTGTGTCCAGCAAACTGTGATCAGGGAACTTACTaGAAAGCGGGGACTCATCGGTCCCATTGGGACAGT +
Preference number: 6 (lower is better)
Translates to: NLCPANCDQGTY*KAGTHRSHWDS
Trigger: ACTGTCCCAATGGGACCGATGAGTCCCCGCTTTGCAGTAAGTTCCCTGATCACAGTTTGCTGGACACAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100051.9
CDS CCA 72 bp GACAGCCAATTTCATCAGTGTCATCCAAACAGTCTCTaGTCCCATCACACCTCCAGGATGCAGGGATACAGT +
Preference number: 6 (lower is better)
Translates to: DSQFHQCHPNSL*SHHTSRMQGYS
Trigger: ACTGTATCCCTGCATCCTGGAGGTGTGATGGGACCAGAGACTGTTTGGATGACACTGATGAAATTGGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 72 bp GCAGGCTCCGTTGGCACAAGTAAGTTGATCACATGTTaGATAATAGCAGTTTCTCTCGTCAGAGCCATCGGG +
Preference number: 6 (lower is better)
Translates to: AGSVGTSKLITC*IIAVSLVRAIG
Trigger: CCCGATGGCTCTGACGAGAGAAACTGCTATTATCCAACATGTGATCAACTTACTTGTGCCAACGGAGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 72 bp TTTGCAAGTCCGCCCATCACTTTCCAATGTATATTCTaGGTCACAAGCGCACCGGAAGGACCCTCTCATGTT +
Preference number: 6 (lower is better)
Translates to: FASPPITFQCIF*VTSAPEGPSHV
Trigger: AACATGAGAGGGTCCTTCCGGTGCGCTTGTGACCCAGAATATACATTGGAAAGTGATGGGCGGACTTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CATCATAACCATGCTGTATCCCCGATATGGGGACCATaGCATCGTTGCTCTTCACCTCAGGATCAAGGGAAA +
Preference number: 6 (lower is better)
Translates to: HHNHAVSPIWGP*HRCSSPQDQGK
Trigger: TTTCCCTTGATCCTGAGGTGAAGAGCAACGATGCCATGGTCCCCATATCGGGGATACAGCATGGTTATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp ATTGCGATGGTGGTAAACCCGGAGACCCCTCAGGTATaGGATGTTATCTCTGAAGACGACTTTGTTACTCCC +
Preference number: 6 (lower is better)
Translates to: IAMVVNPETPQV*DVISEDDFVTP
Trigger: GGGAGTAACAAAGTCGTCTTCAGAGATAACATCCCATACCTGAGGGGTCTCCGGGTTTACCACCATCGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TGCAGGCAGCATGGAAACGACTATGAAAGAGTTATATaGAGAACAGGAGCGACCATCGGGGCTGAGCTTGAA +
Preference number: 6 (lower is better)
Translates to: CRQHGNDYERVI*RTGATIGAELE
Trigger: TTCAAGCTCAGCCCCGATGGTCGCTCCTGTTCTCCATATAACTCTTTCATAGTCGTTTCCATGCTGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GATCGACTCTCCAAAGACGGTGATGCCATAAGGAGTTaGGTAACGACTGCCATAACGAACCACTTGGGATTC +
Preference number: 6 (lower is better)
Translates to: DRLSKDGDAIRS*VTTAITNHLGF
Trigger: GAATCCCAAGTGGTTCGTTATGGCAGTCGTTACCCAACTCCTTATGGCATCACCGTCTTTGGAGAGTCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CCCGCAGTCATTGTAGAAATCACAGCGATAATGGTATaGCACACATCGCCCATTGGCACAAGTGAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: PAVIVEITAIMV*HTSPIGTSEGC
Trigger: ACAGCCTTCACTTGTGCCAATGGGCGATGTGTGCCATACCATTATCGCTGTGATTTCTACAATGACTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TTGCTCATAATCGGCTGCCGGTATGGATGTAACACGTaGATGTCAAAGGGTTTGTGGGTTGTGTTCACCAGC +
Preference number: 6 (lower is better)
Translates to: LLIIGCRYGCNT*MSKGLWVVFTS
Trigger: GCTGGTGAACACAACCCACAAACCCTTTGACATCCACGTGTTACATCCATACCGGCAGCCGATTATGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TACACTTTTCATTGTTGCCACACAGGAACTGCGTGCTaGAGCACATGGGCATACAGAGTGTCCTGTCTCGAA +
Preference number: 6 (lower is better)
Translates to: YTFHCCHTGTAC*STWAYRVSCLE
Trigger: TTCGAGACAGGACACTCTGTATGCCCATGTGCTCCAGCACGCAGTTCCTGTGTGGCAACAATGAAAAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp ATGACTGGATGCACACGTGGTTTTTACATTCGAACATaGCAGCTGGGCAGTAGGTACCATTGGGAAAGCGAG +
Preference number: 6 (lower is better)
Translates to: MTGCTRGFYIRT*QLGSRYHWESE
Trigger: CTCGCTTTCCCAATGGTACCTACTGCCCAGCTGCCATGTTCGAATGTAAAAACCACGTGTGCATCCAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TTTAAAGATGTTCCATCCATGTTAGCACTTGCAATCTaGGCAGGAACCCCACTGTCCGTCCCGTGGTCTGAC +
Preference number: 6 (lower is better)
Translates to: FKDVPSMLALAI*AGTPLSVPWSD
Trigger: GTCAGACCACGGGACGGACAGTGGGGTTCCTGCCAAGATTGCAAGTGCTAACATGGATGGAACATCTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp ATAAGGAGTTGGGTAACGACTGCCATAACGAACCACTaGGGATTCTCCTCCGTCACGATGGATCCTGGCAAT +
Preference number: 6 (lower is better)
Translates to: IRSWVTTAITNH*GFSSVTMDPGN
Trigger: ATTGCCAGGATCCATCGTGACGGAGGAGAATCCCAAGTGGTTCGTTATGGCAGTCGTTACCCAACTCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp ATATGGCTGCATCCTCCATTGAACTGGTCACAAGGATaGCTACACTGCTGCTGCTGGGTCTTGACAACTGTG +
Preference number: 6 (lower is better)
Translates to: IWLHPPLNWSQG*LHCCCWVLTTV
Trigger: CACAGTTGTCAAGACCCAGCAGCAGCAGTGTAGCAATCCTTGTGACCAGTTCAATGGAGGATGCAGCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TTCTCACACTTCTGGCTACAGAGCTGGGGTGTCTCCTaGCACTCGTCAATATCCACGCAAGTACGTTTGTCA +
Preference number: 6 (lower is better)
Translates to: FSHFWLQSWGVS*HSSISTQVRLS
Trigger: TGACAAACGTACTTGCGTGGATATTGACGAGTGCAAGGAGACACCCCAGCTCTGTAGCCAGAAGTGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp ATTTTCTTGGTCACAGACCCATCGAGAGGGGATGCATaGCTGATCAGCACATCGAAACTCGCTCTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: IFLVTDPSRGDA*LISTSKLALCA
Trigger: TGCACAGAGAGCGAGTTTCGATGTGCTGATCAGCAATGCATCCCCTCTCGATGGGTCTGTGACCAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp CCCTGCACTGCCAGGCCCACTTTGGAAGTACTGTCTTaGGCTGCATACATTGGGTTTTCAAATATCACAGGC +
Preference number: 6 (lower is better)
Translates to: PCTARPTLEVLS*AAYIGFSNITG
Trigger: GCCTGTGATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCCTGGCAGTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ATGGTCACAGACATAGGCACGAAGGATGCACTCTCCACTGCCACATaGGAATTCTTTTTGCGAACACAGCGTAGTGCAGTTAGCTTCGTC +
Preference number: 6 (lower is better)
Translates to: MVTDIGTKDALSTAT*EFFLRTQRSAVSFV
Trigger: GACGAAGCTAACTGCACTACGCTGTGTTCGCAAAAAGAATTCCAATGTGGCAGTGGAGAGTGCATCCTTCGTGCCTATGTCTGTGACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 90 bp AGACCCAGGACACGCCCATTCTCTTGGGTAACATGTATGATGACGTaGGTTACTTTCACAGCCATCCTCATCACCAGAATCCTGGCAATC +
Preference number: 6 (lower is better)
Translates to: RPRTRPFSWVTCMMT*VTFTAILITRILAI
Trigger: GATTGCCAGGATTCTGGTGATGAGGATGGCTGTGAAAGTAACCAACGTCATCATACATGTTACCCAAGAGAATGGGCGTGTCCTGGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 90 bp AAGCAAAAGTGGGAACACCCACCATTGCTTTGCAAACAAGGGTTATaGTTAAGCTCTGCCGGTGAGAGGGGCTGGACATGCTCATCAAAG +
Preference number: 6 (lower is better)
Translates to: KQKWEHPPLLCKQGL*LSSAGERGWTCSSK
Trigger: CTTTGATGAGCATGTCCAGCCCCTCTCACCGGCAGAGCTTAACAATAACCCTTGTTTGCAAAGCAATGGTGGGTGTTCCCACTTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp GTAGGCAACTCAGGTAAGGCAAAGCAAAAGTGGGAACACCCACCATaGCTTTGCAAACAAGGGTTATTGTTAAGCTCTGCCGGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: VGNSGKAKQKWEHPP*LCKQGLLLSSAGER
Trigger: CCTCTCACCGGCAGAGCTTAACAATAACCCTTGTTTGCAAAGCAATGGTGGGTGTTCCCACTTTTGCTTTGCCTTACCTGAGTTGCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ACAGACATAGAGCTTAGTGATACATTGCCCGTTCTGACAAGTAAATaGATCATCTCGGCAGGGTGGGTACGAGCAGCCCCTCTCATCACT +
Preference number: 6 (lower is better)
Translates to: TDIELSDTLPVLTSK*IISAGWVRAAPLIT
Trigger: AGTGATGAGAGGGGCTGCTCGTACCCACCCTGCCGAGATGATCAATTTACTTGTCAGAACGGGCAATGTATCACTAAGCTCTATGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp CCTATGACATTCTCACACTTCTGGCTACAGAGCTGGGGTGTCTCCTaGCACTCGTCAATATCCACGCAAGTACGTTTGTCAGACATGAGT +
Preference number: 6 (lower is better)
Translates to: PMTFSHFWLQSWGVS*HSSISTQVRLSDMS
Trigger: ACTCATGTCTGACAAACGTACTTGCGTGGATATTGACGAGTGCAAGGAGACACCCCAGCTCTGTAGCCAGAAGTGTGAGAATGTCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TGTTCCTCTTCTTCCAGATACTCTGAGAACTTCTCAGAGGAGATATaGTACTTCCGGATGCGGACGTTCTCAGGCAGGAGCAAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: CSSSSRYSENFSEEI*YFRMRTFSGRSKRG
Trigger: TCCTCTCTTGCTCCTGCCTGAGAACGTCCGCATCCGGAAGTACAATATCTCCTCTGAGAAGTTCTCAGAGTATCTGGAAGAAGAGGAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GTGGCAGGTCCCCGAAGCTTGACAGTTCTTTTCATCTaGTCCATCCGAACAATCATTGTCTGTGTCACAGAC +
Preference number: 6 (lower is better)
Translates to: VAGPRSLTVLFI*SIRTIIVCVTD
Trigger: GTCTGTGACACAGACAATGATTGTTCGGATGGATCAGATGAAAAGAACTGTCAAGCTTCGGGGACCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp CCACTGTCATGGACCACTCTCTTGTCGGTTCCGTTTTaGAAGGCACTCCAGGTTTTACCCTCCAATAAGTCA +
Preference number: 6 (lower is better)
Translates to: PLSWTTLLSVPF*KALQVLPSNKS
Trigger: TGACTTATTGGAGGGTAAAACCTGGAGTGCCTTTCAAAACGGAACCGACAAGAGAGTGGTCCATGACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp AAACCCGGAGACCCCTCAGGTATGGGATGTTATCTCTaGAGACGACTTTGTTACTCCCAGAGGACTTGTCAA +
Preference number: 6 (lower is better)
Translates to: KPGDPSGMGCYL*RRLCYSQRTCQ
Trigger: TTGACAAGTCCTCTGGGAGTAACAAAGTCGTCTTCAGAGATAACATCCCATACCTGAGGGGTCTCCGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp CTCTGTGCACTCCCGAGGAACACAACTTTCCTCATCTaGGTTGTCTCCACAGTCATCAATGCCGTCACATTT +
Preference number: 6 (lower is better)
Translates to: LCALPRNTTFLI*VVSTVINAVTF
Trigger: AAATGTGACGGCATTGATGACTGTGGAGACAACTCAGATGAGGAAAGTTGTGTTCCTCGGGAGTGCACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp CGCTGTGGTGACTCACATGGAACATTGAAGCACAGGTaGATCTCCTCATCAGAACCGTCGACACAGTCATTT +
Preference number: 6 (lower is better)
Translates to: RCGDSHGTLKHR*ISSSEPSTQSF
Trigger: AAATGACTGTGTCGACGGTTCTGATGAGGAGATTCACCTGTGCTTCAATGTTCCATGTGAGTCACCACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GTAGGCACGTTTGATTGCACCGAATTGAGAGCCCTGTaGCAGCACAGTGTAGTATACAACACTGAGGCCTAT +
Preference number: 6 (lower is better)
Translates to: VGTFDCTELRAL*QHSVVYNTEAY
Trigger: ATAGGCCTCAGTGTTGTATACTACACTGTGCTGTCACAGGGCTCTCAATTCGGTGCAATCAAACGTGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GGTTGTATCTCAGTTGATGGAAGATGCGGACTTGAGTaGGCCAGGGGTTCACCACCAGCAATTTCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: GCISVDGRCGLE*ARGSPPAISLC
Trigger: ACAAAGAGAAATTGCTGGTGGTGAACCCCTGGCTCACTCAAGTCCGCATCTTCCATCAACTGAGATACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AACCAATCACTCAGGAACATATACCCAGCAGCGGGATaGACCACAATGGATCGAGGGTTGTTTAAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: NQSLRNIYPAAG*TTMDRGLFKLL
Trigger: CAGCAACTTAAACAACCCTCGATCCATTGTGGTGCATCCCGCTGCTGGGTATATGTTCCTGAGTGATTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 72 bp CATGCTGTATCCCCGATATGGGGACCATGGCATCGTTaGTCTTCACCTCAGGATCAAGGGAAATTCCAAAAA +
Preference number: 6 (lower is better)
Translates to: HAVSPIWGPWHR*SSPQDQGKFQK
Trigger: TTTTTGGAATTTCCCTTGATCCTGAGGTGAAGAGCAACGATGCCATGGTCCCCATATCGGGGATACAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp ATTCTGTGTGGTTGTCACAGTTGTAAGCAGCAGTCATaGATTCATGGATGGGCTCGTCGGAATAGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: ILCGCHSCKQQS*IHGWARRNSLH
Trigger: GTGGAGACTATTCCGACGAGCCCATCCATGAATGCATGACTGCTGCTTACAACTGTGACAACCACACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TATCACACACATAGTGCTGCGAGACGCAGTTCCCATTaGTGCACTTGTATTCGGTGTCTGTGCAAGGTTTGT +
Preference number: 6 (lower is better)
Translates to: YHTHSAARRSSH*CTCIRCLCKVC
Trigger: ACAAACCTTGCACAGACACCGAATACAAGTGCAGCAATGGGAACTGCGTCTCGCAGCACTATGTGTGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GATGCATCGTCCAGACCCAGGACACGCCCATTCTCTTaGGTAACATGTATGATGACGTTGGTTACTTTCACA +
Preference number: 6 (lower is better)
Translates to: DASSRPRTRPFS*VTCMMTLVTFT
Trigger: TGTGAAAGTAACCAACGTCATCATACATGTTACCCAAGAGAATGGGCGTGTCCTGGGTCTGGACGATGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 72 bp CGGCTCTCACACTTCTGGTCACAAATTCCCCATATCTaGCAGTCATCGAAATCAATGCAAGTACGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: RLSHFWSQIPHI*QSSKSMQVRLS
Trigger: TGACAGCCGTACTTGCATTGATTTCGATGACTGCCAGATATGGGGAATTTGTGACCAGAAGTGTGAGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CCA 72 bp ACGGTGAGTCCAAACGGATGTGTCATCTGGTCAACATaGCCCAGTCTTTTCCTGTCTAAACCATCAAGGTTG +
Preference number: 6 (lower is better)
Translates to: TVSPNGCVIWST*PSLFLSKPSRL
Trigger: CAACCTTGATGGTTTAGACAGGAAAAGACTGGGCCATGTTGACCAGATGACACATCCGTTTGGACTCACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 72 bp TCAATACTTAAGCCACAGGGCCAGTATATCTTTTCCTaGACAATGACTGTGCGCATGGTGCCATCCATGCTG +
Preference number: 6 (lower is better)
Translates to: SILKPQGQYIFS*TMTVRMVPSML
Trigger: CAGCATGGATGGCACCATGCGCACAGTCATTGTCCAGGAAAAGATATACTGGCCCTGTGGCTTAAGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TTGAGATGCACCTGCCGTTATCACAGTGGAACTGATTaGCTGAGCAGCTGTTTAGAGAATGCCCACAAGTGT +
Preference number: 6 (lower is better)
Translates to: LRCTCRYHSGTD*LSSCLENAHKC
Trigger: ACACTTGTGGGCATTCTCTAAACAGCTGCTCAGCCAATCAGTTCCACTGTGATAACGGCAGGTGCATCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp AGATGCATCGTCCAGACCCAGGACACGCCCATTCTCTaGGGTAACATGTATGATGACGTTGGTTACTTTCAC +
Preference number: 6 (lower is better)
Translates to: RCIVQTQDTPIL*GNMYDDVGYFH
Trigger: GTGAAAGTAACCAACGTCATCATACATGTTACCCAAGAGAATGGGCGTGTCCTGGGTCTGGACGATGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 72 bp GTATTGTTTGCATCCACACAGTGCTGGGCTAGCATTTaGCGTTGTCGACCTTCAAGGTCAGAGACAAACAGG +
Preference number: 6 (lower is better)
Translates to: VLFASTQCWASI*RCRPSRSETNR
Trigger: CCTGTTTGTCTCTGACCTTGAAGGTCGACAACGCAAAATGCTAGCCCAGCACTGTGTGGATGCAAACAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TTCGATCACCATTCAGGTAATCTATGGAAAGACCATTaGGCCAGCCAAGGTTCGCAGAAGCCAGAACACTGC +
Preference number: 6 (lower is better)
Translates to: FDHHSGNLWKDH*ASQGSQKPEHC
Trigger: GCAGTGTTCTGGCTTCTGCGAACCTTGGCTGGCCAAATGGTCTTTCCATAGATTACCTGAATGGTGATCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TATCCATTGAGATGCATCGTCCAGACCCAGGACACGCCCATTCTCTaGGGTAACATGTATGATGACGTTGGTTACTTTCACAGCCATCCT +
Preference number: 6 (lower is better)
Translates to: YPLRCIVQTQDTPIL*GNMYDDVGYFHSHP
Trigger: AGGATGGCTGTGAAAGTAACCAACGTCATCATACATGTTACCCAAGAGAATGGGCGTGTCCTGGGTCTGGACGATGCATCTCAATGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 90 bp ATCACACTCATTTACATCTTCACAGGTCTTGGTATCATTGGCAAGTaGGTATCCTATTGGACACACGCAGGTGGCTCCAAAGGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: ITLIYIFTGLGIIGK*VSYWTHAGGSKGPL
Trigger: CAAGGGCCCTTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp AATGTATATTCTGGGTCACAAGCGCACCGGAAGGACCCTCTCATGTaGACACAGTGCTGGCTGCAAAAGCCTGGAATATCACACTCATTT +
Preference number: 6 (lower is better)
Translates to: NVYSGSQAHRKDPLM*TQCWLQKPGISHSF
Trigger: AAATGAGTGTGATATTCCAGGCTTTTGCAGCCAGCACTGTGTCAACATGAGAGGGTCCTTCCGGTGCGCTTGTGACCCAGAATATACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ACCCGGAGACCCCTCAGGTATGGGATGTTATCTCTGAAGACGACTTaGTTACTCCCAGAGGACTTGTCAACTCTTTCAATGACCTCATAC +
Preference number: 6 (lower is better)
Translates to: TRRPLRYGMLSLKTT*LLPEDLSTLSMTSY
Trigger: GTATGAGGTCATTGAAAGAGTTGACAAGTCCTCTGGGAGTAACAAAGTCGTCTTCAGAGATAACATCCCATACCTGAGGGGTCTCCGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp AGGGGCTGGACATGCTCATCAAAGATGGTCACATCCCGTAGCAAGTaGATACTATCTCTTATCACTGTTGGTGGGTCTGTATTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: RGWTCSSKMVTSRSK*ILSLITVGGSVFPG
Trigger: ACCTGGGAATACAGACCCACCAACAGTGATAAGAGATAGTATCAACTTGCTACGGGATGTGACCATCTTTGATGAGCATGTCCAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp CAATACATGTACCCTCGGCAAGGATCTAATACAATAGCTCTTGGTTaGGAAACACGGGCGATCACAGCGCGATTAGATCCATCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: QYMYPRQGSNTIALG*ETRAITARLDPSSA
Trigger: GGCTGAAGATGGATCTAATCGCGCTGTGATCGCCCGTGTTTCCAAACCAAGAGCTATTGTATTAGATCCTTGCCGAGGGTACATGTATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp GGCATATCCACTGAGACTTTGAGGAGGACACGGCGGTATGTGGTATaGATCCGTATCACTTCTATCAGTGTCTCATACACAAAGGCATTG +
Preference number: 6 (lower is better)
Translates to: GISTETLRRTRRYVV*IRITSISVSYTKAL
Trigger: CAATGCCTTTGTGTATGAGACACTGATAGAAGTGATACGGATCAATACCACATACCGCCGTGTCCTCCTCAAAGTCTCAGTGGATATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp AAACAGAAGGTATTGTTTGCATCCACACAGTGCTGGGCTAGCATTTaGCGTTGTCGACCTTCAAGGTCAGAGACAAACAGGCAATCTAGG +
Preference number: 6 (lower is better)
Translates to: KQKVLFASTQCWASI*RCRPSRSETNRQSR
Trigger: CCTAGATTGCCTGTTTGTCTCTGACCTTGAAGGTCGACAACGCAAAATGCTAGCCCAGCACTGTGTGGATGCAAACAATACCTTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GGATGCCCCAAGTTTTCAGTTATGAGAGTAACACGCTaGTTTCCCTCCAAGTTGACCACATCAATGCGGTTG +
Preference number: 6 (lower is better)
Translates to: GCPKFSVMRVTR*FPSKLTTSMRL
Trigger: CAACCGCATTGATGTGGTCAACTTGGAGGGAAATCAGCGTGTTACTCTCATAACTGAAAACTTGGGGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp AATACAGCGACTGTTATCACACCGGAAACGCTGTGGTaGCTCACATGGAACATTGAAGCACAGGTGAATCTC +
Preference number: 6 (lower is better)
Translates to: NTATVITPETLW*LTWNIEAQVNL
Trigger: GAGATTCACCTGTGCTTCAATGTTCCATGTGAGTCACCACAGCGTTTCCGGTGTGATAACAGTCGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp AGTCATTGTCATGGTCACAGACATAGGCACGAAGGATaGACTCTCCACTGCCACATTGGAATTCTTTTTGCG +
Preference number: 6 (lower is better)
Translates to: SHCHGHRHRHEG*TLHCHIGILFA
Trigger: CGCAAAAAGAATTCCAATGTGGCAGTGGAGAGTGCATCCTTCGTGCCTATGTCTGTGACCATGACAATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS GCA 72 bp GAGAAGAGCAGGAAGTTCTTAACGGCAACACAGTGGTaGTCATCTGCATCCAGTTCAAAGCCAAATTCACAC +
Preference number: 6 (lower is better)
Translates to: EKSRKFLTATQW*SSASSSKPNSH
Trigger: GTGTGAATTTGGCTTTGAACTGGATGCAGATGAGCACCACTGTGTTGCCGTTAAGAACTTCCTGCTCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 72 bp AAGGCAAAGCAAAAGTGGGAACACCCACCATTGCTTTaGAAACAAGGGTTATTGTTAAGCTCTGCCGGTGAG +
Preference number: 6 (lower is better)
Translates to: KAKQKWEHPPLL*KQGLLLSSAGE
Trigger: CTCACCGGCAGAGCTTAACAATAACCCTTGTTTGCAAAGCAATGGTGGGTGTTCCCACTTTTGCTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp TCTCCTCTACTCTATCAAAGTCCAGGGCCACAACATTaGCCAATCCTTGCAAAATCAGAGAGTATGACGTGC +
Preference number: 6 (lower is better)
Translates to: SPLLYQSPGPQH*PILAKSESMTC
Trigger: GCACGTCATACTCTCTGATTTTGCAAGGATTGGGCAATGTTGTGGCCCTGGACTTTGATAGAGTAGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GCCAATTCTTGCAATGTATGCATGATCACCCCAATCTaGCCAGTAGACATACCCTCTTTGAGGATGAAGGAC +
Preference number: 6 (lower is better)
Translates to: ANSCNVCMITPI*PVDIPSLRMKD
Trigger: GTCCTTCATCCTCAAAGAGGGTATGTCTACTGGGCAGATTGGGGTGATCATGCATACATTGCAAGAATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CTGGTCTTCAAAGATGTCCAGACTGAAGGGCTTCATTaGATCGTTTATGATGAGTCTCCTGTCAGTCCCATC +
Preference number: 6 (lower is better)
Translates to: LVFKDVQTEGLH*IVYDESPVSPI
Trigger: GATGGGACTGACAGGAGACTCATCATAAACGATGCAATGAAGCCCTTCAGTCTGGACATCTTTGAAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TCACTGTTGGTGGGTCTGTATTCCCAGGTTGCTTGCTaGCTTGGAAGACTTTTCTCAAATTTCTATCCACCC +
Preference number: 6 (lower is better)
Translates to: SLLVGLYSQVAC*LGRLFSNFYPP
Trigger: GGGTGGATAGAAATTTGAGAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGACCCACCAACAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GTCACAGACCCAGTGTTGTGGAATGCACCTCCTGTTTaGAGGTCTGCTGTTTATACAGGTAAACTCAGTACT +
Preference number: 6 (lower is better)
Translates to: VTDPVLWNAPPV*RSAVYTGKLST
Trigger: AGTACTGAGTTTACCTGTATAAACAGCAGACCTCCAAACAGGAGGTGCATTCCACAACACTGGGTCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GTCTCCTTGCACTCGTCAATATCCACGCAAGTACGTTaGTCAGACATGAGTTTGTACCCAGGAAGACAGGAA +
Preference number: 6 (lower is better)
Translates to: VSLHSSISTQVR*SDMSLYPGRQE
Trigger: TTCCTGTCTTCCTGGGTACAAACTCATGTCTGACAAACGTACTTGCGTGGATATTGACGAGTGCAAGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GGCCCACTTTGGAAGTACTGTCTTTGGCTGCATACATaGGGTTTTCAAATATCACAGGCTGCTTGCCTACCT +
Preference number: 6 (lower is better)
Translates to: GPLWKYCLWLHT*GFQISQAACLP
Trigger: AGGTAGGCAAGCAGCCTGTGATATTTGAAAACCCAATGTATGCAGCCAAAGACAGTACTTCCAAAGTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp CCTGGAATATCACACTCATTTACATCTTCACAGGTCTTGGTATCATaGGCAAGTTGGTATCCTATTGGACACACGCAGGTGGCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: PGISHSFTSSQVLVS*ASWYPIGHTQVAPK
Trigger: CTTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTGATATTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp AAGAGAATTTTTAAAGATGTTCCATCCATGTTAGCACTTGCAATCTaGGCAGGAACCCCACTGTCCGTCCCGTGGTCTGACCAATACAGT +
Preference number: 6 (lower is better)
Translates to: KRIFKDVPSMLALAI*AGTPLSVPWSDQYS
Trigger: ACTGTATTGGTCAGACCACGGGACGGACAGTGGGGTTCCTGCCAAGATTGCAAGTGCTAACATGGATGGAACATCTTTAAAAATTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TCCCATTGCTGCACTTGTATTCGGTGTCTGTGCAAGGTTTGTGTGTaGGTTTTCTACAGTGTTCTTCTTTCTCATCGCTTCCATCTCCAC +
Preference number: 6 (lower is better)
Translates to: SHCCTCIRCLCKVCV*VFYSVLLSHRFHLH
Trigger: GTGGAGATGGAAGCGATGAGAAAGAAGAACACTGTAGAAAACCAACACACAAACCTTGCACAGACACCGAATACAAGTGCAGCAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GTGGTACACTTGAGGGTTGGTGTCTGTGAACTTGTTTaGCTTCATCACCGCCATCTTTGTCCAATCAGTAAA +
Preference number: 6 (lower is better)
Translates to: VVHLRVGVCELV*LHHRHLCPISK
Trigger: TTTACTGATTGGACAAAGATGGCGGTGATGAAGGCAAACAAGTTCACAGACACCAACCCTCAAGTGTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 72 bp CAAATCAGAGAACTCGATGTAACCCAGGTGAGCATCTaGCCAGTACAAGAGATCATTGGTGTAGTCAATGGT +
Preference number: 6 (lower is better)
Translates to: QIRELDVTQVSI*PVQEIIGVVNG
Trigger: ACCATTGACTACACCAATGATCTCTTGTACTGGGCAGATGCTCACCTGGGTTACATCGAGTTCTCTGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CACAGCCACAGCTTCCTTTTGCTCAGTGTCCATCTCTaGATAGATTGGATTTTCGAAGTTCGTTGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: HSHSFLLLSVHL*IDWIFEVRCLL
Trigger: AAGCAGACAACGAACTTCGAAAATCCAATCTATGCAGAGATGGACACTGAGCAAAAGGAAGCTGTGGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GATGAGAAGAGCAGGAAGTTCTTAACGGCAACACAGTaGTGCTCATCTGCATCCAGTTCAAAGCCAAATTCA +
Preference number: 6 (lower is better)
Translates to: DEKSRKFLTATQ*CSSASSSKPNS
Trigger: TGAATTTGGCTTTGAACTGGATGCAGATGAGCACCACTGTGTTGCCGTTAAGAACTTCCTGCTCTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 72 bp TTTACATCTTCACAGGTCTTGGTATCATTGGCAAGTTaGTATCCTATTGGACACACGCAGGTGGCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: FTSSQVLVSLAS*YPIGHTQVAPK
Trigger: CTTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CACACTCATTTACATCTTCACAGGTCTTGGTATCATTaGCAAGTTGGTATCCTATTGGACACACGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: HTHLHLHRSWYH*QVGILLDTRRW
Trigger: CCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp AGATTCTATTATTTCTGCGGTCATAGTCCAGTGCGATaGCCATTCCTTCCACACTTATCGCTTGGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: RFYYFCGHSPVR*PFLPHLSLGKA
Trigger: TGCCTTTCCAAGCGATAAGTGTGGAAGGAATGGCCATCGCACTGGACTATGACCGCAGAAATAATAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp TCAAAACAGAAGGTATTGTTTGCATCCACACAGTGCTaGGCTAGCATTTTGCGTTGTCGACCTTCAAGGTCA +
Preference number: 6 (lower is better)
Translates to: SKQKVLFASTQC*ASILRCRPSRS
Trigger: TGACCTTGAAGGTCGACAACGCAAAATGCTAGCCCAGCACTGTGTGGATGCAAACAATACCTTCTGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CACTCCAATAGATTCGATCACCATTCAGGTAATCTATaGAAAGACCATTTGGCCAGCCAAGGTTCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: HSNRFDHHSGNL*KDHLASQGSQK
Trigger: CTTCTGCGAACCTTGGCTGGCCAAATGGTCTTTCCATAGATTACCTGAATGGTGATCGAATCTATTGGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp ACACGCCCATTCTCTTGGGTAACATGTATGATGACGTaGGTTACTTTCACAGCCATCCTCATCACCAGAATC +
Preference number: 6 (lower is better)
Translates to: TRPFSWVTCMMT*VTFTAILITRI
Trigger: GATTCTGGTGATGAGGATGGCTGTGAAAGTAACCAACGTCATCATACATGTTACCCAAGAGAATGGGCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 72 bp GTGTTCACCAGCACGACTCGCCCTGATCCATCATATTaGTTTCCCTTTTCAACTGTCCGTGTATTCCAATCT +
Preference number: 6 (lower is better)
Translates to: VFTSTTRPDPSY*FPFSTVRVFQS
Trigger: AGATTGGAATACACGGACAGTTGAAAAGGGAAACAAATATGATGGATCAGGGCGAGTCGTGCTGGTGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp CTGCAAAAGCCTGGAATATCACACTCATTTACATCTTCACAGGTCTaGGTATCATTGGCAAGTTGGTATCCTATTGGACACACGCAGGTG +
Preference number: 6 (lower is better)
Translates to: LQKPGISHSFTSSQV*VSLASWYPIGHTQV
Trigger: CACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTGATATTCCAGGCTTTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TCTTATCACTGTTGGTGGGTCTGTATTCCCAGGTTGCTTGCTGGCTaGGAAGACTTTTCTCAAATTTCTATCCACCCAAATGATCGACTC +
Preference number: 6 (lower is better)
Translates to: SYHCWWVCIPRLLAG*EDFSQISIHPNDRL
Trigger: GAGTCGATCATTTGGGTGGATAGAAATTTGAGAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGACCCACCAACAGTGATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TTGTGGGTTGTGTTCACCAGCACGACTCGCCCTGATCCATCATATTaGTTTCCCTTTTCAACTGTCCGTGTATTCCAATCTGTCCAAAAA +
Preference number: 6 (lower is better)
Translates to: LWVVFTSTTRPDPSY*FPFSTVRVFQSVQK
Trigger: TTTTTGGACAGATTGGAATACACGGACAGTTGAAAAGGGAAACAAATATGATGGATCAGGGCGAGTCGTGCTGGTGAACACAACCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp TGGGTTTTCAAATATCACAGGCTGCTTGCCTACCTCCATGACGAATaGTTCATTCATTGCCATGGATCTGTCAATAATTGTCTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: WVFKYHRLLAYLHDE*FIHCHGSVNNCLRA
Trigger: GGCCCTGAGACAATTATTGACAGATCCATGGCAATGAATGAACAATTCGTCATGGAGGTAGGCAAGCAGCCTGTGATATTTGAAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp CTGTCTTTGGCTGCATACATTGGGTTTTCAAATATCACAGGCTGCTaGCCTACCTCCATGACGAATTGTTCATTCATTGCCATGGATCTG +
Preference number: 6 (lower is better)
Translates to: LSLAAYIGFSNITGC*PTSMTNCSFIAMDL
Trigger: CAGATCCATGGCAATGAATGAACAATTCGTCATGGAGGTAGGCAAGCAGCCTGTGATATTTGAAAACCCAATGTATGCAGCCAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp ACTCGTCAATATCCACGCAAGTACGTTTGTCAGACATaGGTTTGTACCCAGGAAGACAGGAACAGTAGAAAC +
Preference number: 6 (lower is better)
Translates to: TRQYPRKYVCQT*VCTQEDRNSRN
Trigger: GTTTCTACTGTTCCTGTCTTCCTGGGTACAAACTCATGTCTGACAAACGTACTTGCGTGGATATTGACGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GTCTGTCCAGTAAATGTTGCGACCTATCCAGTCTACTaGAATCATTTCTGTCAAAGAGAGACCACTGTCATG +
Preference number: 6 (lower is better)
Translates to: VCPVNVATYPVY*NHFCQRETTVM
Trigger: CATGACAGTGGTCTCTCTTTGACAGAAATGATTGCAGTAGACTGGATAGGTCGCAACATTTACTGGACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GAAGAAGATTCTATTATTTCTGCGGTCATAGTCCAGTaGGATGGCCATTCCTTCCACACTTATCGCTTGGAA +
Preference number: 6 (lower is better)
Translates to: EEDSIISAVIVQ*DGHSFHTYRLE
Trigger: TTCCAAGCGATAAGTGTGGAAGGAATGGCCATCGCACTGGACTATGACCGCAGAAATAATAGAATCTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CTATCAAAGTCCAGGGCCACAACATTGCCCAATCCTTaGAAAATCAGAGAGTATGACGTGCCATCTATAGTT +
Preference number: 6 (lower is better)
Translates to: LSKSRATTLPNP*KIREYDVPSIV
Trigger: AACTATAGATGGCACGTCATACTCTCTGATTTTGCAAGGATTGGGCAATGTTGTGGCCCTGGACTTTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CTGCTTGCCTACCTCCATGACGAATTGTTCATTCATTaGCATGGATCTGTCAATAATTGTCTCAGGGCCAAA +
Preference number: 6 (lower is better)
Translates to: LLAYLHDELFIH*HGSVNNCLRAK
Trigger: TTTGGCCCTGAGACAATTATTGACAGATCCATGGCAATGAATGAACAATTCGTCATGGAGGTAGGCAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GGAGTGTCAACACCTCAATGGACCGACTTGCAGGAGTaGTATAATAAATGTTTCTTGATACCCAGTCTAAGG +
Preference number: 6 (lower is better)
Translates to: GVSTPQWTDLQE*YNKCFLIPSLR
Trigger: CCTTAGACTGGGTATCAAGAAACATTTATTATACCACTCCTGCAAGTCGGTCCATTGAGGTGTTGACACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp CAGTCTACAGCCAGACTTTCAGCACGTCTTAACCTGTaGCTTATGATGGTCTCCTGGTTTGTCTTATTCAAA +
Preference number: 6 (lower is better)
Translates to: QSTARLSARLNL*LMMVSWFVLFK
Trigger: TTTGAATAAGACAAACCAGGAGACCATCATAAGCCACAGGTTAAGACGTGCTGAAAGTCTGGCTGTAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp ACTCGTGTTATAGCAGGCTCCGTTGGCACAAGTAAGTaGATCACATGTTGGATAATAGCAGTTTCTCTCGTC +
Preference number: 6 (lower is better)
Translates to: TRVIAGSVGTSK*ITCWIIAVSLV
Trigger: GACGAGAGAAACTGCTATTATCCAACATGTGATCAACTTACTTGTGCCAACGGAGCCTGCTATAACACGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080953.12
ENSMUST00000092551.5
ENSMUST00000100051.9
CDS CAA 72 bp ATTTACATCTTCACAGGTCTTGGTATCATTGGCAAGTaGGTATCCTATTGGACACACGCAGGTGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: IYIFTGLGIIGK*VSYWTHAGGSK
Trigger: TTTGGAGCCACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TCACACTCATTTACATCTTCACAGGTCTTGGTATCATaGGCAAGTTGGTATCCTATTGGACACACGCAGGTG +
Preference number: 6 (lower is better)
Translates to: SHSFTSSQVLVS*ASWYPIGHTQV
Trigger: CACCTGCGTGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GGGGTGACAATGCCTTCAGAAACAAGTACAGTTCTATaGGTACAGTCAAGAAAAGAGCGTTCAATCTTCGGC +
Preference number: 6 (lower is better)
Translates to: GVTMPSETSTVL*VQSRKERSIFG
Trigger: GCCGAAGATTGAACGCTCTTTTCTTGACTGTACCAATAGAACTGTACTTGTTTCTGAAGGCATTGTCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GCTGCATACATTGGGTTTTCAAATATCACAGGCTGCTaGCCTACCTCCATGACGAATTGTTCATTCATTGCC +
Preference number: 6 (lower is better)
Translates to: AAYIGFSNITGC*PTSMTNCSFIA
Trigger: GGCAATGAATGAACAATTCGTCATGGAGGTAGGCAAGCAGCCTGTGATATTTGAAAACCCAATGTATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp GTTGATACTATCTCTTATCACTGTTGGTGGGTCTGTATTCCCAGGTaGCTTGCTGGCTTGGAAGACTTTTCTCAAATTTCTATCCACCCA +
Preference number: 6 (lower is better)
Translates to: VDTISYHCWWVCIPR*LAGLEDFSQISIHP
Trigger: TGGGTGGATAGAAATTTGAGAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGACCCACCAACAGTGATAAGAGATAGTATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ATCGACACAGAAACATTCATAACTTCCTTTGCTGTTTCGGCAGCTTaGGGGGCAAATGCCAAACTCCTCACATTCATTGATGTCTTGACA +
Preference number: 6 (lower is better)
Translates to: IDTETFITSFAVSAA*GANAKLLTFIDVLT
Trigger: TGTCAAGACATCAATGAATGTGAGGAGTTTGGCATTTGCCCCCAAAGCTGCCGAAACAGCAAAGGAAGTTATGAATGTTTCTGTGTCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TTCTTAGACTCTGCTAGAATCCGGAAGTTTCTTCCATaGAGATCTCCAACTAGCAAATCCCGACCATTAGAG +
Preference number: 6 (lower is better)
Translates to: FLDSARIRKFLP*RSPTSKSRPLE
Trigger: CTCTAATGGTCGGGATTTGCTAGTTGGAGATCTTCATGGAAGAAACTTCCGGATTCTAGCAGAGTCTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS TCA 72 bp CATGCTCATCAAAGATGGTCACATCCCGTAGCAAGTTaGTACTATCTCTTATCACTGTTGGTGGGTCTGTAT +
Preference number: 6 (lower is better)
Translates to: HAHQRWSHPVAS*YYLLSLLVGLY
Trigger: ATACAGACCCACCAACAGTGATAAGAGATAGTATCAACTTGCTACGGGATGTGACCATCTTTGATGAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GGTTTTCAAATATCACAGGCTGCTTGCCTACCTCCATaGCGAATTGTTCATTCATTGCCATGGATCTGTCAA +
Preference number: 6 (lower is better)
Translates to: GFQISQAACLPP*RIVHSLPWICQ
Trigger: TTGACAGATCCATGGCAATGAATGAACAATTCGTCATGGAGGTAGGCAAGCAGCCTGTGATATTTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CTTGAGATCCAGTCAAAGGACAGACACTCAACATTTTaGAACCTGTTTGCTGTGATGACTTCTTTTCCTGTG +
Preference number: 6 (lower is better)
Translates to: LEIQSKDRHSTF*NLFAVMTSFPV
Trigger: CACAGGAAAAGAAGTCATCACAGCAAACAGGTTGCAAAATGTTGAGTGTCTGTCCTTTGACTGGATCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS GCA 72 bp TCTCTTATCACTGTTGGTGGGTCTGTATTCCCAGGTTaGTTGCTGGCTTGGAAGACTTTTCTCAAATTTCTA +
Preference number: 6 (lower is better)
Translates to: SLITVGGSVFPG*LLAWKTFLKFL
Trigger: TAGAAATTTGAGAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGACCCACCAACAGTGATAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CCA 72 bp GAACCACTTGGGATTCTCCTCCGTCACGATGGATCCTaGCAATTATATCTAAGGAATCATCAACCCAATAAA +
Preference number: 6 (lower is better)
Translates to: EPLGILLRHDGS*QLYLRNHQPNK
Trigger: TTTATTGGGTTGATGATTCCTTAGATATAATTGCCAGGATCCATCGTGACGGAGGAGAATCCCAAGTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp ACATGCTCATCAAAGATGGTCACATCCCGTAGCAAGTaGATACTATCTCTTATCACTGTTGGTGGGTCTGTA +
Preference number: 6 (lower is better)
Translates to: TCSSKMVTSRSK*ILSLITVGGSV
Trigger: TACAGACCCACCAACAGTGATAAGAGATAGTATCAACTTGCTACGGGATGTGACCATCTTTGATGAGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp CCATTGCTGCACTTGTATTCGGTGTCTGTGCAAGGTTaGTGTGTTGGTTTTCTACAGTGTTCTTCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: PLLHLYSVSVQG*CVGFLQCSSFS
Trigger: TGAGAAAGAAGAACACTGTAGAAAACCAACACACAAACCTTGCACAGACACCGAATACAAGTGCAGCAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp TTGAACCCAGGTCGACAGGAGCAGATAAATCCTCCATaGCTTAACTGGGTGCAGTTCTGTTCACATATTTTT +
Preference number: 6 (lower is better)
Translates to: LNPGRQEQINPP*LNWVQFCSHIF
Trigger: AAAAATATGTGAACAGAACTGCACCCAGTTAAGCAATGGAGGATTTATCTGCTCCTGTCGACCTGGGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GAAACATTCATAACTTCCTTTGCTGTTTCGGCAGCTTaGGGGGCAAATGCCAAACTCCTCACATTCATTGAT +
Preference number: 6 (lower is better)
Translates to: ETFITSFAVSAA*GANAKLLTFID
Trigger: ATCAATGAATGTGAGGAGTTTGGCATTTGCCCCCAAAGCTGCCGAAACAGCAAAGGAAGTTATGAATGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp ATACTATCTCTTATCACTGTTGGTGGGTCTGTATTCCCAGGTTGCTaGCTGGCTTGGAAGACTTTTCTCAAATTTCTATCCACCCAAATG +
Preference number: 6 (lower is better)
Translates to: ILSLITVGGSVFPGC*LAWKTFLKFLSTQM
Trigger: CATTTGGGTGGATAGAAATTTGAGAAAAGTCTTCCAAGCCAGCAAGCAACCTGGGAATACAGACCCACCAACAGTGATAAGAGATAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp AATGGCTTGGATATGTTCCTCTTCTTCCAGATACTCTaGGAACTTCTCAGAGGAGATATTGTACTTCCGGAT +
Preference number: 6 (lower is better)
Translates to: NGLDMFLFFQIL*ELLRGDIVLPD
Trigger: ATCCGGAAGTACAATATCTCCTCTGAGAAGTTCTCAGAGTATCTGGAAGAAGAGGAACATATCCAAGCCATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp CCTGGAATATCACACTCATTTACATCTTCACAGGTCTaGGTATCATTGGCAAGTTGGTATCCTATTGGACAC +
Preference number: 6 (lower is better)
Translates to: PGISHSFTSSQV*VSLASWYPIGH
Trigger: GTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTGATATTCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp GGCCATTCGATCTTGGTAGAGATAATCACAGTCTTATaGGTTCCATCCATGCCAATTCTTGCAATGTATGCA +
Preference number: 6 (lower is better)
Translates to: GHSILVEIITVL*VPSMPILAMYA
Trigger: TGCATACATTGCAAGAATTGGCATGGATGGAACCAATAAGACTGTGATTATCTCTACCAAGATCGAATGGCC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp TCCACACTTATCGCTTGGAAAGGCAGGTTATGGTCTTaGGGGTCAAAGTGTAAACTTCTCAAGGAATTATTT +
Preference number: 6 (lower is better)
Translates to: STLIAWKGRLWS*GSKCKLLKELF
Trigger: AAATAATTCCTTGAGAAGTTTACACTTTGACCCTCAAGACCATAACCTGCCTTTCCAAGCGATAAGTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp GTCAAAGGACAGACACTCAACATTTTGCAACCTGTTTaGTGTGATGACTTCTTTTCCTGTGCCATCAATTTT +
Preference number: 6 (lower is better)
Translates to: VKGQTLNILQPV*CDDFFSCAINF
Trigger: AAAATTGATGGCACAGGAAAAGAAGTCATCACAGCAAACAGGTTGCAAAATGTTGAGTGTCTGTCCTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080953.12
ENSMUST00000100051.9
CDS CCA 72 bp CTGGAATATCACACTCATTTACATCTTCACAGGTCTTaGTATCATTGGCAAGTTGGTATCCTATTGGACACA +
Preference number: 6 (lower is better)
Translates to: LEYHTHLHLHRS*YHWQVGILLDT
Trigger: TGTGTCCAATAGGATACCAACTTGCCAATGATACCAAGACCTGTGAAGATGTAAATGAGTGTGATATTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 72 bp AAATATCACAGGCTGCTTGCCTACCTCCATGACGAATaGTTCATTCATTGCCATGGATCTGTCAATAATTGT +
Preference number: 6 (lower is better)
Translates to: KYHRLLAYLHDE*FIHCHGSVNNC
Trigger: ACAATTATTGACAGATCCATGGCAATGAATGAACAATTCGTCATGGAGGTAGGCAAGCAGCCTGTGATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS TCA 72 bp GGGCAAATGCCAAACTCCTCACATTCATTGATGTCTTaGCATGAATTTTTGTCCAAAGTACTAGGTTTGAAC +
Preference number: 6 (lower is better)
Translates to: GQMPNSSHSLMS*HEFLSKVLGLN
Trigger: GTTCAAACCTAGTACTTTGGACAAAAATTCATGTCAAGACATCAATGAATGTGAGGAGTTTGGCATTTGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS GCA 72 bp CTTATTCAAAAACATCCTCTCGATAATTTGTTTCTCTaGATCGATCCAATACAGCCTCTCCTCTACTCTATC +
Preference number: 6 (lower is better)
Translates to: LIQKHPLDNLFL*IDPIQPLLYSI
Trigger: GATAGAGTAGAGGAGAGGCTGTATTGGATCGATGCAGAGAAACAAATTATCGAGAGGATGTTTTTGAATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12
CDS CAA 90 bp GGAAATTCCAAAAATTACATTTTCTCTTACGGATATCAAGAAAGGTaGATCGCCTCTCACACAGTTGACAGAATCATCAGAAAGGTTCCA +
Preference number: 6 (lower is better)
Translates to: GNSKNYIFSYGYQER*IASHTVDRIIRKVP
Trigger: TGGAACCTTTCTGATGATTCTGTCAACTGTGTGAGAGGCGATCAACCTTTCTTGATATCCGTAAGAGAAAATGTAATTTTTGGAATTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080953.12