Pregenerated sensors for LRP12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022305Ensembl transcript IDs: ENSMUST00000022916.13, ENSMUST00000110305.3, ENSMUST00000228575.2
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACTGGAACTGGTTGTAGGCACAGGGTTGGAAAGCAGTCGTGGTTaGGGGGTGAGCATCGCTGGCACAGACCTCCTCGTCAGAACTGTC | + |
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Preference number: 1 (lower is better) Translates to: TLELVVGTGLESSRG*GVSIAGTDLLVRTV Trigger: GACAGTTCTGACGAGGAGGTCTGTGCCAGCGATGCTCACCCCCCAACCACGACTGCTTTCCAACCCTGTGCCTACAACCAGTTCCAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR CCA 90 bp | CTGGACACGCTGTCATCTGAGTGGAACCGGATCCAAACGTGGTCTTaGGAAGAGATATATGGTGGCGGAATTGTGGACCCACACGCTCGG | + |
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Preference number: 1 (lower is better) Translates to: LDTLSSEWNRIQTWS*EEIYGGGIVDPHAR Trigger: CCGAGCGTGTGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTTGGATCCGGTTCCACTCAGATGACAGCGTGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR TCA 90 bp | AGGCACAGTCTGGCTGCTCAGATTTCCCTGAAAAATACGCCAGCCTaGAGCCTTTCCTGGACACGCTGTCATCTGAGTGGAACCGGATCC | + |
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Preference number: 1 (lower is better) Translates to: RHSLAAQISLKNTPA*SLSWTRCHLSGTGS Trigger: GGATCCGGTTCCACTCAGATGACAGCGTGTCCAGGAAAGGCTTCAGGCTGGCGTATTTTTCAGGGAAATCTGAGCAGCCAGACTGTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR TCA 90 bp | ACAGCGGAACTGATCACAGGCACAGTCTGGCTGCTCAGATTTCCCTaGAAAATACGCCAGCCTGAAGCCTTTCCTGGACACGCTGTCATC | + |
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Preference number: 1 (lower is better) Translates to: TAELITGTVWLLRFP*KIRQPEAFPGHAVI Trigger: GATGACAGCGTGTCCAGGAAAGGCTTCAGGCTGGCGTATTTTTCAGGGAAATCTGAGCAGCCAGACTGTGCCTGTGATCAGTTCCGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR CCA 90 bp | CCTTTCCTGGACACGCTGTCATCTGAGTGGAACCGGATCCAAACGTaGTCTTGGGAAGAGATATATGGTGGCGGAATTGTGGACCCACAC | + |
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Preference number: 1 (lower is better) Translates to: PFLDTLSSEWNRIQT*SWEEIYGGGIVDPH Trigger: GTGTGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTTGGATCCGGTTCCACTCAGATGACAGCGTGTCCAGGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR CCA 90 bp | AAATACGCCAGCCTGAAGCCTTTCCTGGACACGCTGTCATCTGAGTaGAACCGGATCCAAACGTGGTCTTGGGAAGAGATATATGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: KYASLKPFLDTLSSE*NRIQTWSWEEIYGG Trigger: GCCACCATATATCTCTTCCCAAGACCACGTTTGGATCCGGTTCCACTCAGATGACAGCGTGTCCAGGAAAGGCTTCAGGCTGGCGTATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR TCA 90 bp | GTACCATCAAGTTTAAAGTCAGTGAACCGTAAGATGACTTTCCGATaGTCACCAGTGTCTATCAGCCAGGTGCAGTTACTTCCAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: VPSSLKSVNRKMTFR*SPVSISQVQLLPGG Trigger: TCCTCCTGGAAGTAACTGCACCTGGCTGATAGACACTGGTGATCATCGGAAAGTCATCTTACGGTTCACTGACTTTAAACTTGATGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR CCA 90 bp | GGATCCAAACGTGGTCTTGGGAAGAGATATATGGTGGCGGAATTGTaGACCCACACGCTCGGTAACTTTCAATATTCTTGTATGTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: GSKRGLGKRYMVAEL*THTLGNFQYSCMFL Trigger: TAGAAACATACAAGAATATTGAAAGTTACCGAGCGTGTGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTTGGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR GCA 90 bp | GGCATGTCACAGTCTATCTCGTCTCCTAGGTCCAGGCAGTCAATGTTCCCATCAACTCGTCCATGCTGTTaGACTTCCAGGCTTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GMSQSISSPRSRQSMFPSTRPCC*TSRLLE Trigger: TTCCAGAAGCCTGGAAGTGCAACAGCATGGACGAGT...TGATGGGAACATTGACTGCCTGGACCTAGGAGACGAGATAGACTGTGACATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCGTCAGAACTGTCTCCACACTCGTCCATGCTGTTGCACTTCCAGGCTTATCCAAACGTGGTCTTaGGAAGAGATATATGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PPRQNCLHTRPCCCTSRLIQTWS*EEIYGG Trigger: GCCACCATATATCTCTTCCCAAGACCACGTTTGGAT...AAGCCTGGAAGTGCAACAGCATGGACGAGTGTGGAGACAGTTCTGACGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATCACTGTGTGTTGAATaGGAGAGCAGATTCTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKSLCVE*ESRFFA Trigger: GGCAAAGAATCTGCTCTCTCATTCAACACACAGTGA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR-3UTR TCA 90 bp | GATGATCACCAGTGTCTATCAGCCAGGTGCAGTTACTTCCAGGAGGATAAAAGTAAAAATACGCCAGCCTaGAGCCTTTCCTGGACACGC | + |
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Preference number: 2 (lower is better) Translates to: DDHQCLSARCSYFQEDKSKNTPA*SLSWTR Trigger: GCGTGTCCAGGAAAGGCTTCAGGCTGGCGTATTTTT...ACTTTTATCCTCCTGGAAGTAACTGCACCTGGCTGATAGACACTGGTGATCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATGCTGTTGCACTTCCAGGCTTCTGGAATACACTTTCCATTTCCACAGCGGTTGGGAAGAGATATATaGTGGCGGAATTGTGGACCC | + |
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Preference number: 2 (lower is better) Translates to: SMLLHFQASGIHFPFPQRLGRDI*WRNCGP Trigger: GGGTCCACAATTCCGCCACCATATATCTCTTCCCAA...CCGCTGTGGAAATGGAAAGTGTATTCCAGAAGCCTGGAAGTGCAACAGCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CCA 90 bp | GGCATGTCACAGTCTATCTCGTCTCCTAGGTCCAGGCAGTCAATGTTCCCATCAGCACTTCCAGGCTTCTaGAATACACTTTCCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: GMSQSISSPRSRQSMFPSALPGF*NTLSIS Trigger: GGAAATGGAAAGTGTATTCCAGAAGCCTGGAAGTGC...TGATGGGAACATTGACTGCCTGGACCTAGGAGACGAGATAGACTGTGACATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTATCAGCCAGGTGCAGTTACTTCCAGGAGGATAAAAGTCGGGGTAGTTGGGAACCGGATCCAAACGTaGTCTTGGGAAGAGATATAT | + |
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Preference number: 2 (lower is better) Translates to: VYQPGAVTSRRIKVGVVGNRIQT*SWEEIY Trigger: ATATATCTCTTCCCAAGACCACGTTTGGATCCGGTT...CCCAACTACCCCGACTTTTATCCTCCTGGAAGTAACTGCACCTGGCTGATAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATTACAAAACAGTGAGTaGATATTGCTCCAGCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKLQNSE*ILLQLA Trigger: TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR-3UTR CCA 90 bp | GATGATCACCAGTGTCTATCAGCCAGGTGCAGTTACTTCCAGGAGGATAAAAGTGGAAGAGATATATGGTaGCGGAATTGTGGACCCACA | + |
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Preference number: 2 (lower is better) Translates to: DDHQCLSARCSYFQEDKSGRDIW*RNCGPT Trigger: TGTGGGTCCACAATTCCGCCACCATATATCTCTTCC...ACTTTTATCCTCCTGGAAGTAACTGCACCTGGCTGATAGACACTGGTGATCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR CAA 90 bp | ACCGGATCCAAACGTGGTCTTGGGAAGAGATATATGGTGGCGGAATaGTGGACCCACACGCTCGGTAACTTTCAATATTCTTGTATGTTT | + |
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Preference number: 2 (lower is better) Translates to: TGSKRGLGKRYMVAE*WTHTLGNFQYSCMF Trigger: AAACATACAAGAATATTGAAAGTTACCGAGCGTGTGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTTGGATCCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAGCATCCAAGAGTCAATaGAAAGAAGGTACCGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LHHCVLNERADSLPATGPASKSQ*KEGTVL Trigger: CAAAACGGTACCTTCTTTCCATTGACTCTTGGATGC...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR-3UTR TCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAACTTCTGTCCCTAAATTaGGATGAAAACAGAAACGTG | + |
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Preference number: 2 (lower is better) Translates to: LPRGAERVQFLYLFYKVQLLSLN*DENRNV Trigger: CACGTTTCTGTTTTCATCTCAATTTAGGGACAGAAG...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTTACAAAACAGTGAGTaGATATTGCTCCAGCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: RASKSQWKEGTVLYKPTFLQNSE*ILLQLA Trigger: TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAA...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCTGGGATTTCACCATTTaGTCTGAACCACACCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KVQNVMHSRESSSAYFCPWDFTI*SEPHQS Trigger: ACTCTGGTGTGGTTCAGACCAAATGGTGAAATCCCA...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCGCAAACGGAAGAACATaGCTGAAGACTACGAATACA | + |
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Preference number: 2 (lower is better) Translates to: KVQNVMHSRESSSAYFCPANGRT*LKTTNT Trigger: TGTATTCGTAGTCTTCAGTCATGTTCTTCCGTTTGC...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR TCA 72 bp | CGCCAGCCTGAAGCCTTTCCTGGACACGCTGTCATCTaGGTGGAACCGGATCCAAACGTGGTCTTGGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RQPEAFPGHAVI*VEPDPNVVLGR Trigger: TCTTCCCAAGACCACGTTTGGATCCGGTTCCACTCAGATGACAGCGTGTCCAGGAAAGGCTTCAGGCTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR TCA 72 bp | CTGATCACAGGCACAGTCTGGCTGCTCAGATTTCCCTaGAAAATACGCCAGCCTGAAGCCTTTCCTGGACAC | + |
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Preference number: 3 (lower is better) Translates to: LITGTVWLLRFP*KIRQPEAFPGH Trigger: GTGTCCAGGAAAGGCTTCAGGCTGGCGTATTTTTCAGGGAAATCTGAGCAGCCAGACTGTGCCTGTGATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR CCA 72 bp | CCGGATCCAAACGTGGTCTTGGGAAGAGATATATGGTaGCGGAATTGTGGACCCACACGCTCGGTAACTTTC | + |
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Preference number: 3 (lower is better) Translates to: PDPNVVLGRDIW*RNCGPTRSVTF Trigger: GAAAGTTACCGAGCGTGTGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTTGGATCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR CCA 72 bp | GAACCGGATCCAAACGTGGTCTTGGGAAGAGATATATaGTGGCGGAATTGTGGACCCACACGCTCGGTAACT | + |
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Preference number: 3 (lower is better) Translates to: EPDPNVVLGRDI*WRNCGPTRSVT Trigger: AGTTACCGAGCGTGTGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTTGGATCCGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTCCGATGATCACCAGTGTCTATCAGCCAGGTGCAGTTACTTCCAGGAGGATCACTCGTCCATGCTGTaGCACTTCCAGGCTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LSDDHQCLSARCSYFQEDHSSML*HFQASG Trigger: TCCAGAAGCCTGGAAGTGCAACAGCATGGACGAGTG...ATCCTCCTGGAAGTAACTGCACCTGGCTGATAGACACTGGTGATCATCGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAAGGATATTGCTCCAGCTaGCATACAGTCTGGCGATTC | + |
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Preference number: 3 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKGYCSS*HTVWRF Trigger: GAATCGCCAGACTGTATGCAAGCTGGAGCAATATCC...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR CCA 72 bp | CTGTCATCTGAGTGGAACCGGATCCAAACGTGGTCTTaGGAAGAGATATATGGTGGCGGAATTGTGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: LSSEWNRIQTWS*EEIYGGGIVDP Trigger: TGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTTGGATCCGGTTCCACTCAGATGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR CCA 72 bp | GACACGCTGTCATCTGAGTGGAACCGGATCCAAACGTaGTCTTGGGAAGAGATATATGGTGGCGGAATTGTG | + |
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Preference number: 3 (lower is better) Translates to: DTLSSEWNRIQT*SWEEIYGGGIV Trigger: CACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTTGGATCCGGTTCCACTCAGATGACAGCGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR TCA 72 bp | ACTTTAAGGACTCAGGGAGACACGTGTAAACTTTGGTaGAGCGGGACAGACACTGGAACTGGTTGTAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: TLRTQGDTCKLW*SGTDTGTGCRH Trigger: GTGCCTACAACCAGTTCCAGTGTCTGTCCCGCTTCACCAAAGTTTACACGTGTCTCCCTGAGTCCTTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CAA 90 bp | CGTCCATGCTGTTGCACTTCCAGGCTTCTGGAATACACTTTCCATTTCCACAGCGATCCAAACGTGGTCTaGGGAAGAGATATATGGTGG | + |
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Preference number: 3 (lower is better) Translates to: RPCCCTSRLLEYTFHFHSDPNVV*GRDIWW Trigger: CCACCATATATCTCTTCCCAAGACCACGTTTGGATC...GCTGTGGAAATGGAAAGTGTATTCCAGAAGCCTGGAAGTGCAACAGCATGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR TCA 72 bp | TCTCGAACGCCACGGAACTTTTACATCACTGTGTGTTaGATGAGAGAGCAGATTCTTTGCCTGCGACAGGTC | + |
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Preference number: 3 (lower is better) Translates to: SRTPRNFYITVC*MREQILCLRQV Trigger: GACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAAAAGTTCCGTGGCGTTCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR CCA 72 bp | CGTGGTCTTGGGAAGAGATATATGGTGGCGGAATTGTaGACCCACACGCTCGGTAACTTTCAATATTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: RGLGKRYMVAEL*THTLGNFQYSC Trigger: ACAAGAATATTGAAAGTTACCGAGCGTGTGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CAA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAAACAGTGAGTGGATATaGCTCCAGCTTGCATACAGT | + |
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Preference number: 3 (lower is better) Translates to: LHHCVLNERADSLPATGPNSEWI*LQLAYS Trigger: ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTT...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR-3UTR CAA 90 bp | TGGCAAAGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAAACAGTGAGTGGATATaGCTCCAGCTTGCATACAGT | + |
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Preference number: 3 (lower is better) Translates to: WQRASKSQWKEGTVLYKPNSEWI*LQLAYS Trigger: ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTT...TGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCTTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR TCA 72 bp | AGTTTAAAGTCAGTGAACCGTAAGATGACTTTCCGATaGTCACCAGTGTCTATCAGCCAGGTGCAGTTACTT | + |
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Preference number: 3 (lower is better) Translates to: SLKSVNRKMTFR*SPVSISQVQLL Trigger: AAGTAACTGCACCTGGCTGATAGACACTGGTGATCATCGGAAAGTCATCTTACGGTTCACTGACTTTAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| 3UTR-3UTR CAA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAGGATATTGCTCCAGCTaGCATACAGTCTGGCGATTC | + |
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Preference number: 3 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIGYCSS*HTVWRF Trigger: GAATCGCCAGACTGTATGCAAGCTGGAGCAATATCC...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR CCA 72 bp | GAGATGAAAACAGAAACGTGTTGGGATTTCACCATTTaGTCTGAACCACACCAGAGTAGTAAAGTCAGCATT | + |
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Preference number: 3 (lower is better) Translates to: EMKTETCWDFTI*SEPHQSSKVSI Trigger: AATGCTGACTTTACTACTCTGGTGTGGTTCAGACCAAATGGTGAAATCCCAACACGTTTCTGTTTTCATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR TCA 72 bp | AATCTTCATCCGCTTACTTCTGTCCCTAAATTGAGATaGAAACAGAAACGTGTTGGGATTTCACCATTTGGT | + |
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Preference number: 3 (lower is better) Translates to: NLHPLTSVPKLR*KQKRVGISPFG Trigger: ACCAAATGGTGAAATCCCAACACGTTTCTGTTTTCATCTCAATTTAGGGACAGAAGTAAGCGGATGAAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| 3UTR CCA 72 bp | AAAACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTaGATATTGCTCCAGCTTGCATACAGTCTGGCGATT | + |
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Preference number: 3 (lower is better) Translates to: KTSLIVKLQNSE*ILLQLAYSLAI Trigger: AATCGCCAGACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR TCA 90 bp | GTCTATCAGCCAGGTGCAGTTACTTCCAGGAGGATAAAAGTCGGGGTAGTTGGGGCCGACCCCCGCCGCTaGGACTCTTTTGTGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VYQPGAVTSRRIKVGVVGADPRR*DSFVLQ Trigger: CTGGAGCACAAAAGAGTCTCAGCGGCGGGGGTCGGC...CCCAACTACCCCGACTTTTATCCTCCTGGAAGTAACTGCACCTGGCTGATAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
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| CDS-3UTR GCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATGTGAGCTGGTGACGTaGTGGGCTCACACTCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKCELVT*WAHTRG Trigger: GCCCCGAGTGTGAGCCCAGCACGTCACCAGCTCACA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR CCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAAGTGGGAGGGACCTTCTaGGGCAACGGTGCTGCAACC | + |
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Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKVGGTF*GNGAAT Trigger: GGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCAC...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR TCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAACCACCTCTGGTGCTCTaGGCAGAGGAATTCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKPPLVL*AEEFPP Trigger: AGGTGGGAATTCCTCTGCTCAGAGCACCAGAGGTGG...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR GCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATGTAGCACCCCCAGTTaGCCCCACAGGGTATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKCSTPS*PHRVFP Trigger: GGGAAATACCCTGTGGGGGCAACTGGGGGTGCTACA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAAGAAGTAAATCCCAGCTaGGATCGGACAGCTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKEVNPS*DRTASL Trigger: GAGGCTAGCTGTCCGATCTCAGCTGGGATTTACTTC...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAACCCTTGTACTTGGTCTaGGGCAAGGTCAAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKPLYLV*GKVKKR Trigger: CCTCTTCTTGACCTTGCCTCAGACCAAGTACAAGGG...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAACTCCACACTCGTCCATaGTGTTGCACTTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKLHTRP*CCTSRL Trigger: AAGCCTGGAAGTGCAACAGCATGGACGAGTGTGGAG...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATTCATCCCTTCCGTTTaGGCAATGCCAGTACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKFIPSV*AMPVPV Trigger: GACGGGTACTGGCATTGCCCAAACGGAAGGGATGAA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TGGCAAAGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAGAGCTGGTGACGTGCTaGGCTCACACTCGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WQRASKSQWKEGTVLYKPELVTC*AHTRGF Trigger: GAAGCCCCGAGTGTGAGCCCAGCACGTCACCAGCTC...TGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCTTTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAGACTTAAAGCACTTGTaGGCTGGTGACGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHHCVLNERADSLPATGPDLKHL*AGDVLG Trigger: GCCCAGCACGTCACCAGCTCACAAGTGCTTTAAGTC...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATGTCTATCAGCCAGGTaGAGTTACTTCCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKCLSAR*SYFQED Trigger: ATCCTCCTGGAAGTAACTGCACCTGGCTGATAGACA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAAGTTCTCCTCGTCACTaGCGTCACCGCAGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHHCVLNERADSLPATGPSSPRH*RHRSHP Trigger: AGGATGACTGCGGTGACGGCAGTGACGAGGAGAACT...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAGCCGACCCCCGCCGCTaGGACTCTTTTGTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIADPRR*DSFVLQ Trigger: CTGGAGCACAAAAGAGTCTCAGCGGCGGGGGTCGGC...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAAGGCACATGGTACAATTaGTTTCATCCCTTCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKGTWYN*FHPFRL Trigger: CAAACGGAAGGGATGAAATCAATTGTACCATGTGCC...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCACCCTTGTACTTGGTCTaGGGCAAGGTCAAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHHCVLNERADSLPATGPPLYLV*GKVKKR Trigger: CCTCTTCTTGACCTTGCCTCAGACCAAGTACAAGGG...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAACTAAACCCTTGTACTTaGTCTGAGGCAAGGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKLNPCT*SEARSR Trigger: TCTTGACCTTGCCTCAGACCAAGTACAAGGGTTTAG...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATTTCCGTCTTCACTGTaGCTTCTAAGCAAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKFPSSL*LLSKCL Trigger: CAGACACTTGCTTAGAAGCCACAGTGAAGACGGAAA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTGCCGACCCCCGCCGCTaGGACTCTTTTGTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSADPRR*DSFVLQ Trigger: CTGGAGCACAAAAGAGTCTCAGCGGCGGGGGTCGGC...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAACGTGTAAACTTTGGTaGAGCGGGACAGACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHHCVLNERADSLPATGPTCKLW*SGTDTG Trigger: TCCAGTGTCTGTCCCGCTTCACCAAAGTTTACACGT...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAAGGTAGTTGGGAGAATTaGAGGTGCCATAGAAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKGSWEN*RCHRSI Trigger: AATACTTCTATGGCACCTTCAATTCTCCCAACTACC...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTCCACCTCTGGTGCTCTaGGCAGAGGAATTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RASKSQWKEGTVLYKPTFPPLVL*AEEFPP Trigger: AGGTGGGAATTCCTCTGCTCAGAGCACCAGAGGTGG...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATCAGAGAATAAAGCTTaGAAGTGCACCCCAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKSENKA*KCTPMQ Trigger: TTGCATTGGGGTGCACTTGCAAGCTTTATTCTCTGA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAAAACCGGATCCAAACGTaGTCTTGGGAAGAGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKNRIQT*SWEEIY Trigger: ATATATCTCTTCCCAAGACCACGTTTGGATCCGGTT...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCATCCACGCGTGACAACTaGGTCTCAAATGATCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LHHCVLNERADSLPATGPSTRDN*VSNDLR Trigger: ACGGAGATCATTTGAGACCCAGTTGTCACGCGTGGA...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCGTGGGAGGGACCTTCTaGGGCAACGGTGCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPVGGTF*GNGAAT Trigger: GGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCAC...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | TGGCAAAGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAAAAAATACGCCAGCCTaGAGCCTTTCCTGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: WQRASKSQWKEGTVLYKPKNTPA*SLSWTR Trigger: GCGTGTCCAGGAAAGGCTTCAGGCTGGCGTATTTTT...TGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCTTTGCCA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | TGGCAAAGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCACTCCACACTCGTCCATaGTGTTGCACTTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WQRASKSQWKEGTVLYKPLHTRP*CCTSRL Trigger: AAGCCTGGAAGTGCAACAGCATGGACGAGTGTGGAG...TGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCTTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATATGCAACCCCACCCGATaGTCCCGCCGTATCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNICNPTR*SRRIPS Trigger: AGAAGGGATACGGCGGGAGCATCGGGTGGGGTTGCA...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATGTGAGCTGGTGACGTaGTGGGCTCACACTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLIVKLQNSEWILLQLACELVT*WAHTRG Trigger: GCCCCGAGTGTGAGCCCAGCACGTCACCAGCTCACA...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCACGGTTGTTCTTACAGTaGAAATTCCCTGGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHHCVLNERADSLPATGPRLFLQ*KFPGWQ Trigger: TTGCCAGCCAGGGAATTTCCACTGTAAGAACAACCG...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTGAGCTGGTGACGTGCTaGGCTCACACTCGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSELVTC*AHTRGF Trigger: GAAGCCCCGAGTGTGAGCCCAGCACGTCACCAGCTC...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTTGCAACCCCACCCGATaGTCCCGCCGTATCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSCNPTR*SRRIPS Trigger: AGAAGGGATACGGCGGGAGCATCGGGTGGGGTTGCA...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAATTCTCGTCCACTCACTaGGGTGTCCAGCTGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPRGAERVQFLYLFYKVQFSSTH*GVQLSQ Trigger: TTGAGACAGCTGGACACCGCAGTGAGTGGACGAGAA...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCGGTATCTGGGCTGTGTaGACAATGCCACAGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPGIWAV*TMPQRS Trigger: CGAGCGCTGTGGCATTGTGCACACAGCCCAGATACC...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAGGTATCTGGGCTGTGTaGACAATGCCACAGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIGIWAV*TMPQRS Trigger: CGAGCGCTGTGGCATTGTGCACACAGCCCAGATACC...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAATCTCTGCTGCTGCTCTaGCTAGGGACAACCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRGAERVQFLYLFYKVQSLLLL*LGTTSS Trigger: AGATGAGGTTGTCCCTAGCCAGAGCAGCAGCAGAGA...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| 3UTR CAA 72 bp | AAACGTGGTCTTGGGAAGAGATATATGGTGGCGGAATaGTGGACCCACACGCTCGGTAACTTTCAATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRGLGKRYMVAE*WTHTLGNFQYS Trigger: AGAATATTGAAAGTTACCGAGCGTGTGGGTCCACAATTCCGCCACCATATATCTCTTCCCAAGACCACGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAGACTTAAAGCACTTGTaGGCTGGTGACGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIDLKHL*AGDVLG Trigger: GCCCAGCACGTCACCAGCTCACAAGTGCTTTAAGTC...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAAACTCGTCCATGCTGTTaGACTTCCAGGCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPRGAERVQFLYLFYKVQTRPCC*TSRLLE Trigger: TTCCAGAAGCCTGGAAGTGCAACAGCATGGACGAGT...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTACTCGTCCATGCTGTTaGACTTCCAGGCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RASKSQWKEGTVLYKPTFTRPCC*TSRLLE Trigger: TTCCAGAAGCCTGGAAGTGCAACAGCATGGACGAGT...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATGTAGCACCCCCAGTTaGCCCCACAGGGTATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLIVKLQNSEWILLQLACSTPS*PHRVFP Trigger: GGGAAATACCCTGTGGGGGCAACTGGGGGTGCTACA...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCATCAGAGAATAAAGCTTaGAAGTGCACCCCAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHHCVLNERADSLPATGPSENKA*KCTPMQ Trigger: TTGCATTGGGGTGCACTTGCAAGCTTTATTCTCTGA...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCCATGGCCACCTCTGGTaGTCTGAGCAGAGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPHGHLW*SEQRNS Trigger: GGAATTCCTCTGCTCAGAGCACCAGAGGTGGCCATG...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATACACTTCCCTTCCATCTaGATGGCCACCTCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIHFPSI*MATSGA Trigger: AGCACCAGAGGTGGCCATGCAGATGGAAGGGAAGTG...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCCACTTCCCTTCCATCTaGATGGCCACCTCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPHFPSI*MATSGA Trigger: AGCACCAGAGGTGGCCATGCAGATGGAAGGGAAGTG...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TGGCAAAGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCACGGTTGTTCTTACAGTaGAAATTCCCTGGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WQRASKSQWKEGTVLYKPRLFLQ*KFPGWQ Trigger: TTGCCAGCCAGGGAATTTCCACTGTAAGAACAACCG...TGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCTTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCGAAGTAAATCCCAGCTaGGATCGGACAGCTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPEVNPS*DRTASL Trigger: GAGGCTAGCTGTCCGATCTCAGCTGGGATTTACTTC...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCAAGTTCTCCTCGTCACTaGCGTCACCGCAGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLIVKLQNSEWILLQLASSPRH*RHRSHP Trigger: AGGATGACTGCGGTGACGGCAGTGACGAGGAGAACT...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTCATGGCCACCTCTGGTaGTCTGAGCAGAGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSHGHLW*SEQRNS Trigger: GGAATTCCTCTGCTCAGAGCACCAGAGGTGGCCATG...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAAGGAAGAGATATATGGTaGCGGAATTGTGGACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPRGAERVQFLYLFYKVQGRDIW*RNCGPT Trigger: TGTGGGTCCACAATTCCGCCACCATATATCTCTTCC...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTGGAAGAGATATATGGTaGCGGAATTGTGGACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RASKSQWKEGTVLYKPTFGRDIW*RNCGPT Trigger: TGTGGGTCCACAATTCCGCCACCATATATCTCTTCC...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAAACAGGGTATTTCCCATaGCAAACAGAAGCCATCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPRGAERVQFLYLFYKVQTGYFP*QTEAID Trigger: GTCGATGGCTTCTGTTTGCCATGGGAAATACCCTGT...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTACAGGGTATTTCCCATaGCAAACAGAAGCCATCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RASKSQWKEGTVLYKPTFTGYFP*QTEAID Trigger: GTCGATGGCTTCTGTTTGCCATGGGAAATACCCTGT...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATATCACCGCAGTCATCCTaGGAATCACACACCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNISPQSS*ESHTQL Trigger: AAGCTGGGTGTGTGATTCCCAGGATGACTGCGGTGA...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCTCACCGCAGTCATCCTaGGAATCACACACCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPSPQSS*ESHTQL Trigger: AAGCTGGGTGTGTGATTCCCAGGATGACTGCGGTGA...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAAAAGATGACTTTCCGATaGTCACCAGTGTCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPRGAERVQFLYLFYKVQKMTFR*SPVSIS Trigger: GCTGATAGACACTGGTGATCATCGGAAAGTCATCTT...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTGGCACATGGTACAATTaGTTTCATCCCTTCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RASKSQWKEGTVLYKPTFGTWYN*FHPFRL Trigger: CAAACGGAAGGGATGAAATCAATTGTACCATGTGCC...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTGGAAGCCTGATTAGGTaGACAGACAGGAAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RASKSQWKEGTVLYKPTFGSLIR*TDRKIF Trigger: GAAGATTTTCCTGTCTGTTCACCTAATCAGGCTTCC...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTAGCGTTGAACCCTCTTaGAGCATTCACTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RASKSQWKEGTVLYKPTFSVEPS*SIHFIS Trigger: GCTGATAAAGTGAATGCTGCAAGAGGGTTCAACGCT...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAAGCACTTCCAGGCTTCTaGAATACACTTTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRGAERVQFLYLFYKVQALPGF*NTLSIS Trigger: GGAAATGGAAAGTGTATTCCAGAAGCCTGGAAGTGC...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTTTCATCCCTTCCGTTTaGGCAATGCCAGTACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSFIPSV*AMPVPV Trigger: GACGGGTACTGGCATTGCCCAAACGGAAGGGATGAA...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAACCATTTCGAGAACATaGAAATTCTTCCTTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHHCVLNERADSLPATGPTISRT*KFFLLA Trigger: TGCCAAAAGGAAGAATTTCCATGTTCTCGAAATGGT...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTTCTCTGCTGCTGCTCTaGCTAGGGACAACCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSSLLLL*LGTTSS Trigger: AGATGAGGTTGTCCCTAGCCAGAGCAGCAGCAGAGA...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCGTCTGGAGCAGTCATTaGCATCAATGTCCGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPVWSSH*HQCPKL Trigger: GAGCTTCGGACATTGATGCCAATGACTGCTCCAGAC...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAGTCTGGAGCAGTCATTaGCATCAATGTCCGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIVWSSH*HQCPKL Trigger: GAGCTTCGGACATTGATGCCAATGACTGCTCCAGAC...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAATTTCCGTCTTCACTGTaGCTTCTAAGCAAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPRGAERVQFLYLFYKVQFPSSL*LLSKCL Trigger: CAGACACTTGCTTAGAAGCCACAGTGAAGACGGAAA...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATATGCTCGAATTTGTTCTaGACTCTCCCCACAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNICSNLF*TLPTSS Trigger: ACTGCTTGTGGGGAGAGTCCAGAACAAATTCGAGCA...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022916.13 |
||
| CDS-3UTR CCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTTCCACGCGTGACAACTaGGTCTCAAATGATCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSSTRDN*VSNDLR Trigger: ACGGAGATCATTTGAGACCCAGTTGTCACGCGTGGA...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCGGTCAAGAAGAGGTCTaGAGCAGTCATTGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPGQEEV*SSHWHQ Trigger: TTGATGCCAATGACTGCTCCAGACCTCTTCTTGACC...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCACAAGTGTCTGGTATCTaGGCTGTGTGCACAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLIVKLQNSEWILLQLAQVSGI*AVCTMP Trigger: TGGCATTGTGCACACAGCCCAGATACCAGACACTTG...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTCAAGTGTCTGGTATCTaGGCTGTGTGCACAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSQVSGI*AVCTMP Trigger: TGGCATTGTGCACACAGCCCAGATACCAGACACTTG...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCAAGATGACTTTCCGATaGTCACCAGTGTCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPKMTFR*SPVSIS Trigger: GCTGATAGACACTGGTGATCATCGGAAAGTCATCTT...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATACATAGGAAGCCTGATTaGAGTAAATCCCAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIHRKPD*SKSQLR Trigger: TCTCAGCTGGGATTTACTTCAATCAGGCTTCCTATG...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCCATAGGAAGCCTGATTaGAGTAAATCCCAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPHRKPD*SKSQLR Trigger: TCTCAGCTGGGATTTACTTCAATCAGGCTTCCTATG...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCGCCAATGACCCTGAATaGCGGGATCTTGCAAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPANDPE*RDLAKL Trigger: TAATTTTGCAAGATCCCGTCATTCAGGGTCATTGGC...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAAGCGTTGAACCCTCTTaGAGCATTCACTTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNISVEPS*SIHFIS Trigger: GCTGATAAAGTGAATGCTGCAAGAGGGTTCAACGCT...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAAATGGTTTTGGTAGTTaGAGCGATCAGAACGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNINGFGS*SDQNEG Trigger: ACCCTCGTTCTGATCGCTGCAACTACCAAAACCATT...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATTGGGAAGAGATATATaGTGGCGGAATTGTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLIVKLQNSEWILLQLALGRDI*WRNCGP Trigger: GGGTCCACAATTCCGCCACCATATATCTCTTCCCAA...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAATCCAAACGTGGTCTTaGGAAGAGATATATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIIQTWS*EEIYGG Trigger: GCCACCATATATCTCTTCCCAAGACCACGTTTGGAT...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCCTAAACCCTTGTACTTaGTCTGAGGCAAGGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVQNVMHSRESSSAYFCPLNPCT*SEARSR Trigger: TCTTGACCTTGCCTCAGACCAAGTACAAGGGTTTAG...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATGCTCGAATTTGTTCTaGACTCTCCCCACAAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLIVKLQNSEWILLQLACSNLF*TLPTSV Trigger: TACGCTTGTGGGGAGAGTCCAGAACAAATTCGAGCA...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATAGTCCGTCATATATTTTaGCATAATCACCATACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIVRHIF*HNHHTR Trigger: CCGGGTATGGTGATTATGTCAAAATATATGACGGAC...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTGGAAGCCTGATTAGGTaGACAGACAGGAAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSGSLIR*TDRKIF Trigger: GAAGATTTTCCTGTCTGTTCACCTAATCAGGCTTCC...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR GCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTAATGGTTTTGGTAGTTaGAGCGATCAGAACGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSNGFGS*SDQNEG Trigger: ACCCTCGTTCTGATCGCTGCAACTACCAAAACCATT...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTGCACTTCCAGGCTTCTaGAATACACTTTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSALPGF*NTLSIS Trigger: GGAAATGGAAAGTGTATTCCAGAAGCCTGGAAGTGC...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TGGCAAAGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAGGAAATTCTTCCTTTTaGCACATGGTACAATTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WQRASKSQWKEGTVLYKPGNSSF*HMVQLI Trigger: AATCAATTGTACCATGTGCCAAAAGGAAGAATTTCC...TGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCTTTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCAGGTAGTTGGGAGAATTaGAGGTGCCATAGAAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TSLIVKLQNSEWILLQLAGSWEN*RCHRSI Trigger: AATACTTCTATGGCACCTTCAATTCTCCCAACTACC...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR TCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTGTCCGTCATATATTTTaGCATAATCACCATACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSVRHIF*HNHHTR Trigger: CCGGGTATGGTGATTATGTCAAAATATATGACGGAC...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTAACCGGATCCAAACGTaGTCTTGGGAAGAGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSNRIQT*SWEEIY Trigger: ATATATCTCTTCCCAAGACCACGTTTGGATCCGGTT...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTACCATTTCGAGAACATaGAAATTCTTCCTTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIVKLQNSEWILLQLAYSTISRT*KFFLLA Trigger: TGCCAAAAGGAAGAATTTCCATGTTCTCGAAATGGT...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CCA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCAGGAAATTCTTCCTTTTaGCACATGGTACAATTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TSLIVKLQNSEWILLQLAGNSSF*HMVQLI Trigger: AATCAATTGTACCATGTGCCAAAAGGAAGAATTTCC...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS CCA 90 bp | CCTGATCCCACTGTGGCCTCCACGGCGGTCGTGGGAGGGACCTTCTaGGGCAACGGTGCTGCAACCCCACCCGATGCTCCCGCCGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PDPTVASTAVVGGTF*GNGAATPPDAPAVS Trigger: GGATACGGCGGGAGCATCGGGTGGGGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCACGACCGCCGTGGAGGCCACAGTGGGATCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS GCA 90 bp | TGTGGCCTCCACGGCGGTCGTGGGAGGGACCTTCTGGGGCAACGGTaGTGCAACCCCACCCGATGCTCCCGCCGTATCCCTTCTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: CGLHGGRGRDLLGQR*CNPTRCSRRIPSLI Trigger: AATGAGAGAAGGGATACGGCGGGAGCATCGGGTGGGGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCACGACCGCCGTGGAGGCCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS CCA 90 bp | CAGAGGAATTCCCACCTGATCCCACTGTGGCCTCCACGGCGGTCGTaGGAGGGACCTTCTGGGGCAACGGTGCTGCAACCCCACCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: QRNSHLIPLWPPRRS*EGPSGATVLQPHPM Trigger: CATCGGGTGGGGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCACGACCGCCGTGGAGGCCACAGTGGGATCAGGTGGGAATTCCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | ATCTGCATGGCCACCTCTGGTGCTCTGAGCAGAGGAATTCCCACCTaGTCCCACTGTGGCCTCCACGGCGGTCGTGGGAGGGACCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ICMATSGALSRGIPT*SHCGLHGGRGRDLL Trigger: CAGAAGGTCCCTCCCACGACCGCCGTGGAGGCCACAGTGGGATCAGGTGGGAATTCCTCTGCTCAGAGCACCAGAGGTGGCCATGCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | AGCGGACCCAGCGCAGGCCCTGAGTCATCCGACTTAAAGCACTTGTaGGCTGGTGACGTGCTGGGCTCACACTCGGGGCTTCCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPSAGPESSDLKHL*AGDVLGSHSGLPHL Trigger: CAAGTGTGGAAGCCCCGAGTGTGAGCCCAGCACGTCACCAGCTCACAAGTGCTTTAAGTCGGATGACTCAGGGCCTGCGCTGGGTCCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | TGTGAGCTGGTGACGTGCTGGGCTCACACTCGGGGCTTCCACACTTaGCACTTCCCTTCCATCTGCATGGCCACCTCTGGTGCTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CELVTCWAHTRGFHT*HFPSICMATSGALS Trigger: GCTCAGAGCACCAGAGGTGGCCATGCAGATGGAAGGGAAGTGTCAAGTGTGGAAGCCCCGAGTGTGAGCCCAGCACGTCACCAGCTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS CCA 90 bp | CGTCCACTCACTGCGGTGTCCAGCTGTCTCAAAGGACTCCGGTTCTaGGTAGTGGAGCTCGATCGACCTAGTGTAAAGCGGACCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPLTAVSSCLKGLRF*VVELDRPSVKRTQR Trigger: GCGCTGGGTCCGCTTTACACTAGGTCGATCGAGCTCCACTACCCAGAACCGGAGTCCTTTGAGACAGCTGGACACCGCAGTGAGTGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS CCA 90 bp | CTCGTTTCCGTCTTCACTGTGGCTTCTAAGCAAGTGTCTGGTATCTaGGCTGTGTGCACAATGCCACAGCGCTCGCAGGGGCCGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSVFTVASKQVSGI*AVCTMPQRSQGPSR Trigger: CCGGGACGGCCCCTGCGAGCGCTGTGGCATTGTGCACACAGCCCAGATACCAGACACTTGCTTAGAAGCCACAGTGAAGACGGAAACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | ACACTTGACACTTCCCTTCCATCTGCATGGCCACCTCTGGTGCTCTaGGCAGAGGAATTCCCACCTGATCCCACTGTGGCCTCCACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TLDTSLPSAWPPLVL*AEEFPPDPTVASTA Trigger: CGCCGTGGAGGCCACAGTGGGATCAGGTGGGAATTCCTCTGCTCAGAGCACCAGAGGTGGCCATGCAGATGGAAGGGAAGTGTCAAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS GCA 90 bp | GCCAGTACCCGTCACAGCGCTGCTGCTCTGTGTAGCACCCCCAGTTaGCCCCACAGGGTATTTCCCATGGCAAACAGAAGCCATCGACTT | + |
|
Preference number: 5 (lower is better) Translates to: ASTRHSAAALCSTPS*PHRVFPMANRSHRL Trigger: AAGTCGATGGCTTCTGTTTGCCATGGGAAATACCCTGTGGGGGCAACTGGGGGTGCTACACAGAGCAGCAGCGCTGTGACGGGTACTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS GCA 90 bp | CTGTGGCTTCTAAGCAAGTGTCTGGTATCTGGGCTGTGTGCACAATaGCACAGCGCTCGCAGGGGCCGTCCCGGTTACTTGTTCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LWLLSKCLVSGLCAQ*HSARRGRPGYLFSL Trigger: GAGTGAGAACAAGTAACCGGGACGGCCCCTGCGAGCGCTGTGGCATTGTGCACACAGCCCAGATACCAGACACTTGCTTAGAAGCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS GCA 90 bp | GTCTTCACTGTGGCTTCTAAGCAAGTGTCTGGTATCTGGGCTGTGTaGACAATGCCACAGCGCTCGCAGGGGCCGTCCCGGTTACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VFTVASKQVSGIWAV*TMPQRSQGPSRLLV Trigger: AACAAGTAACCGGGACGGCCCCTGCGAGCGCTGTGGCATTGTGCACACAGCCCAGATACCAGACACTTGCTTAGAAGCCACAGTGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | GTCTATCAGCCAGGTGCAGTTACTTCCAGGAGGATAAAAGTCGGGGTAGTTGGGGCCGCTGAGACTCTTTaGTGCTCCAGCGACGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VYQPGAVTSRRIKVGVVGAAETL*CSSDGP Trigger: TGGCCCGTCGCTGGAGCACAAAAGAGTCTCAGCGGC...CCCAACTACCCCGACTTTTATCCTCCTGGAAGTAACTGCACCTGGCTGATAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228575.2 |
||
| CDS CCA 90 bp | CTGCTCTGTGTAGCACCCCCAGTTGCCCCCACAGGGTATTTCCCATaGCAAACAGAAGCCATCGACTTGGTAAGTAGCGTTGAACCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLCVAPPVAPTGYFP*QTEAIDLVSSVEPS Trigger: AGAGGGTTCAACGCTACTTACCAAGTCGATGGCTTCTGTTTGCCATGGGAAATACCCTGTGGGGGCAACTGGGGGTGCTACACAGAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | GTTTGCCCTTATGAGCCAGCTGCAGTTGACTTGGGCAGGATAGTCTaGAGGCCAGCCTGGACTCGTGATTATTCCACTCGGTGCTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VCPYEPAAVDLGRIV*RPAWTRDYSTRCSN Trigger: ATTCGAGCACCGAGTGGAATAATCACGAGTCCAGGCTGGCCTTCAGACTATCCTGCCCAAGTCAACTGCAGCTGGCTCATAAGGGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | TTTTCTGTGTCAGTGTCATCGGACTCCACGGAGAATAAGCTTCTGTaGGGGCGACTCCTCTCAGTTTCTCTGCTGCTGCTCTGGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVSVSSDSTENKLL*GRLLSVSLLLLWLG Trigger: CCCTAGCCAGAGCAGCAGCAGAGAAACTGAGAGGAGTCGCCCTCACAGAAGCTTATTCTCCGTGGAGTCCGATGACACTGACACAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAGCCGCTGAGACTCTTTaGTGCTCCAGCGACGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHHCVLNERADSLPATGPAAETL*CSSDGP Trigger: TGGCCCGTCGCTGGAGCACAAAAGAGTCTCAGCGGC...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | TGTACTCTTATCTGTCCGGAGGAAGAAACGACCGTCAGAGGAGCGTaGGAATCGAAAGCAGTTAGCACCCGCAAGAGCTTGCGAGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: CTLICPEEETTVRGA*ESKAVSTRKSLRGF Trigger: GAATCCTCGCAAGCTCTTGCGGGTGCTAACTGCTTTCGATTCTCACGCTCCTCTGACGGTCGTTTCTTCCTCCGGACAGATAAGAGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS CCA 90 bp | ACTCCAGGGTTTCCTGCACTGTGTGGCTGTCTAAACCCTTGTACTTaGTCTGAGGCAAGGTCAAGAAGAGGTCTGGAGCAGTCATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TPGFPALCGCLNPCT*SEARSRRGLEQSLA Trigger: TGCCAATGACTGCTCCAGACCTCTTCTTGACCTTGCCTCAGACCAAGTACAAGGGTTTAGACAGCCACACAGTGCAGGAAACCCTGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS CCA 90 bp | AACACAGCAGCAAAGCCTCGTCATCACTCGTTTCCGTCTTCACTGTaGCTTCTAAGCAAGTGTCTGGTATCTGGGCTGTGTGCACAATGC | + |
|
Preference number: 5 (lower is better) Translates to: NTAAKPRHHSFPSSL*LLSKCLVSGLCAQC Trigger: GCATTGTGCACACAGCCCAGATACCAGACACTTGCTTAGAAGCCACAGTGAAGACGGAAACGAGTGATGACGAGGCTTTGCTGCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | TTAGGTGAACAGACAGGAAAATCTTCTACGGGTGGGATTAGTCCCTaGGCGATCAACTGTCCATATGAGGGAGGAGCCTCTCTTCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGEQTGKSSTGGISP*AINCPYEGGASLRR Trigger: TCTCCGAAGAGAGGCTCCTCCCTCATATGGACAGTTGATCGCTCAGGGACTAATCCCACCCGTAGAAGATTTTCCTGTCTGTTCACCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | AGGGTTTCCTGCACTGTGTGGCTGTCTAAACCCTTGTACTTGGTCTaGGGCAAGGTCAAGAAGAGGTCTGGAGCAGTCATTGGCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVSCTVWLSKPLYLV*GKVKKRSGAVIGIN Trigger: ATTGATGCCAATGACTGCTCCAGACCTCTTCTTGACCTTGCCTCAGACCAAGTACAAGGGTTTAGACAGCCACACAGTGCAGGAAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | ACTGTAGTGCAAATCCCTAGGGTCCAACTCAGGCAAACCTCCGTGTCAGGGAAATCTCCCCACAAGCAGTaGACACTCCTGAAATATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVVQIPRVQLRQTSVSGKSPHKQ*TLLKYA Trigger: TGCATATTTCAGGAGTGTCAACTGCTTGTGGGGAGA...TTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGGGATTTGCACTACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022916.13 |
||
| CDS-3UTR CAA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAGTTGTAGGCACAGGGTaGGAAAGCAGTCGTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHHCVLNERADSLPATGPVVGTG*ESSRGW Trigger: CCAACCACGACTGCTTTCCAACCCTGTGCCTACAAC...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCATTTCATCCCTTCCGTTaGGGCAATGCCAGTACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LHHCVLNERADSLPATGPFHPFR*GNASTR Trigger: ACGGGTACTGGCATTGCCCAAACGGAAGGGATGAAA...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCAGGTCTGGAGCAGTCATaGGCATCAATGTCCGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHHCVLNERADSLPATGPGLEQS*ASMSEA Trigger: AGCTTCGGACATTGATGCCAATGACTGCTCCAGACC...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS CCA 90 bp | GTACTTGGTCTGAGGCAAGGTCAAGAAGAGGTCTGGAGCAGTCATTaGCATCAATGTCCGAAGCTCCGTCTGAAACTGGAATTAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VLGLRQGQEEVWSSH*HQCPKLRLKLELAF Trigger: AAATGCTAATTCCAGTTTCAGACGGAGCTTCGGACATTGATGCCAATGACTGCTCCAGACCTCTTCTTGACCTTGCCTCAGACCAAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TGGCAAAGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAGTTGTAGGCACAGGGTaGGAAAGCAGTCGTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WQRASKSQWKEGTVLYKPVVGTG*ESSRGW Trigger: CCAACCACGACTGCTTTCCAACCCTGTGCCTACAAC...TGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCTTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TGGCAAAGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCATCGGGGCTTCCACACTaGACACTTCCCTTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: WQRASKSQWKEGTVLYKPSGLPH*TLPFHL Trigger: CAGATGGAAGGGAAGTGTCAAGTGTGGAAGCCCCGA...TGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCTTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS TCA 90 bp | CATTTCGAGAACATGGAAATTCTTCCTTTTGGCACATGGTACAATTaGTTTCATCCCTTCCGTTTGGGCAATGCCAGTACCCGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HFENMEILPFGTWYN*FHPFRLGNASTRHS Trigger: GCTGTGACGGGTACTGGCATTGCCCAAACGGAAGGGATGAAATCAATTGTACCATGTGCCAAAAGGAAGAATTTCCATGTTCTCGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS GCA 90 bp | ATTTGTTCTGGACTCTCCCCACAAGCAGTTGACACTCCTGAAATATaGACATTTTCAGAAAGTTCTGCAAGAGCACCATTTCCGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: ICSGLSPQAVDTPEI*TFSESSARAPFPYT Trigger: GGTGTACGGAAATGGTGCTCTTGCAGAACTTTCTGAAAATGTGCATATTTCAGGAGTGTCAACTGCTTGTGGGGAGAGTCCAGAACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022916.13 |
||
| CDS CCA 90 bp | GTTGCAGCGATCAGAACGAGGGTAGCAGACACCATTTCGAGAACATaGAAATTCTTCCTTTTGGCACATGGTACAATTGATTTCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VAAIRTRVADTISRT*KFFLLAHGTIDFIP Trigger: AGGGATGAAATCAATTGTACCATGTGCCAAAAGGAAGAATTTCCATGTTCTCGAAATGGTGTCTGCTACCCTCGTTCTGATCGCTGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATACACTCGTCCATGCTGTaGCACTTCCAGGCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIHSSML*HFQASG Trigger: TCCAGAAGCCTGGAAGTGCAACAGCATGGACGAGTG...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TTACATCACTGTGTGTTGAATGAGAGAGCAGATTCTTTGCCTGCGACAGGTCCATCAAACACACAGCGGTaGTTCTTACAGTGGAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LHHCVLNERADSLPATGPSNTQR*FLQWKF Trigger: GAATTTCCACTGTAAGAACAACCGCTGTGTGTTTGA...TGGACCTGTCGCAGGCAAAGAATCTGCTCTCTCATTCAACACACAGTGATGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCTCGGGGCTTCCACACTaGACACTTCCCTTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVQNVMHSRESSSAYFCPSGLPH*TLPFHL Trigger: CAGATGGAAGGGAAGTGTCAAGTGTGGAAGCCCCGA...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAAGATCCAAACGTGGTCTaGGGAAGAGATATATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPRGAERVQFLYLFYKVQDPNVV*GRDIWW Trigger: CCACCATATATCTCTTCCCAAGACCACGTTTGGATC...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTCACTCGTCCATGCTGTaGCACTTCCAGGCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIVKLQNSEWILLQLAYSHSSML*HFQASG Trigger: TCCAGAAGCCTGGAAGTGCAACAGCATGGACGAGTG...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATTTCATCCCTTCCGTTaGGGCAATGCCAGTACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TSLIVKLQNSEWILLQLAFHPFR*GNASTR Trigger: ACGGGTACTGGCATTGCCCAAACGGAAGGGATGAAA...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTCTTGTATGTTTCTATaGTCAGCCAGTCCAAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RASKSQWKEGTVLYKPTFSCMFL*SASPKC Trigger: GCACTTTGGACTGGCTGACAATAGAAACATACAAGA...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCGATCCAAACGTGGTCTaGGGAAGAGATATATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVQNVMHSRESSSAYFCPDPNVV*GRDIWW Trigger: CCACCATATATCTCTTCCCAAGACCACGTTTGGATC...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCATCCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTGGCACATGGTACAATaGATTTCATCCCTTCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RASKSQWKEGTVLYKPTFWHMVQ*ISSLPF Trigger: AAACGGAAGGGATGAAATCAATTGTACCATGTGCCA...AAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGGATGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
||
| CDS-3UTR CAA 90 bp | TTACCCCGTGGAGCTGAGCGGGTACAATTTCTGTACCTATTTTATAAAGTTCAATCAAACACACAGCGGTaGTTCTTACAGTGGAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LPRGAERVQFLYLFYKVQSNTQR*FLQWKF Trigger: GAATTTCCACTGTAAGAACAACCGCTGTGTGTTTGA...TTGAACTTTATAAAATAGGTACAGAAATTGTACCCGCTCAGCTCCACGGGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR CAA 90 bp | ACTAGTTTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCAGTTCGGACAATGGTTTaGGTAGTTGCAGCGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: TSLIVKLQNSEWILLQLAVRTMV*VVAAIR Trigger: TCTGATCGCTGCAACTACCAAAACCATTGTCCGAAC...TGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAAACTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR CAA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTGTTCGGACAATGGTTTaGGTAGTTGCAGCGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: LIVKLQNSEWILLQLAYSVRTMV*VVAAIR Trigger: TCTGATCGCTGCAACTACCAAAACCATTGTCCGAAC...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR CAA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCTCTTGTATGTTTCTATaGTCAGCCAGTCCAAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: KVQNVMHSRESSSAYFCPSCMFL*SASPKC Trigger: GCACTTTGGACTGGCTGACAATAGAAACATACAAGA...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR CAA 90 bp | AAAGTTCAAAATGTAATGCATAGTAGAGAATCTTCATCCGCTTACTTCTGTCCCTGGCACATGGTACAATaGATTTCATCCCTTCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: KVQNVMHSRESSSAYFCPWHMVQ*ISSLPF Trigger: AAACGGAAGGGATGAAATCAATTGTACCATGTGCCA...GGGACAGAAGTAAGCGGATGAAGATTCTCTACTATGCATTACATTTTGAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR CAA 90 bp | CCAAGAGTCAATGGAAAGAAGGTACCGTTTTGTACAAACCAACCTTTTAACATATGGAAATTCTTCCTTTaGGCACATGGTACAATTGAT | + |
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Preference number: 5 (lower is better) Translates to: PRVNGKKVPFCTNQPFNIWKFFL*AHGTID Trigger: ATCAATTGTACCATGTGCCAAAAGGAAGAATTTCCA...TATGTTAAAAGGTTGGTTTGTACAAAACGGTACCTTCTTTCCATTGACTCTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS-3UTR CAA 90 bp | TTAATTGTAAAGTTACAAAACAGTGAGTGGATATTGCTCCAGCTTGCATACAGTTGGAAATTCTTCCTTTaGGCACATGGTACAATTGAT | + |
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Preference number: 5 (lower is better) Translates to: LIVKLQNSEWILLQLAYSWKFFL*AHGTID Trigger: ATCAATTGTACCATGTGCCAAAAGGAAGAATTTCCA...ACTGTATGCAAGCTGGAGCAATATCCACTCACTGTTTTGTAACTTTACAATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | CACGGCGGTCGTGGGAGGGACCTTCTGGGGCAACGGTaGTGCAACCCCACCCGATGCTCCCGCCGTATCCCT | + |
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Preference number: 6 (lower is better) Translates to: HGGRGRDLLGQR*CNPTRCSRRIP Trigger: AGGGATACGGCGGGAGCATCGGGTGGGGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCACGACCGCCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | ACTGTGGCCTCCACGGCGGTCGTGGGAGGGACCTTCTaGGGCAACGGTGCTGCAACCCCACCCGATGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: TVASTAVVGGTF*GNGAATPPDAP Trigger: GGGAGCATCGGGTGGGGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCACGACCGCCGTGGAGGCCACAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | GGCGGTCGTGGGAGGGACCTTCTGGGGCAACGGTGCTaGAACCCCACCCGATGCTCCCGCCGTATCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GGRGRDLLGQRC*NPTRCSRRIPS Trigger: AGAAGGGATACGGCGGGAGCATCGGGTGGGGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCACGACCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | TCCCACCTGATCCCACTGTGGCCTCCACGGCGGTCGTaGGAGGGACCTTCTGGGGCAACGGTGCTGCAACCC | + |
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Preference number: 6 (lower is better) Translates to: SHLIPLWPPRRS*EGPSGATVLQP Trigger: GGGTTGCAGCACCGTTGCCCCAGAAGGTCCCTCCCACGACCGCCGTGGAGGCCACAGTGGGATCAGGTGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | GTGGCTTCTAAGCAAGTGTCTGGTATCTGGGCTGTGTaGACAATGCCACAGCGCTCGCAGGGGCCGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: VASKQVSGIWAV*TMPQRSQGPSR Trigger: CCGGGACGGCCCCTGCGAGCGCTGTGGCATTGTGCACACAGCCCAGATACCAGACACTTGCTTAGAAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CAA 72 bp | CAATGCCACAGCGCTCGCAGGGGCCGTCCCGGTTACTaGTTCTCACTCCAGGGTTTCCTGCACTGTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QCHSARRGRPGY*FSLQGFLHCVA Trigger: AGCCACACAGTGCAGGAAACCCTGGAGTGAGAACAAGTAACCGGGACGGCCCCTGCGAGCGCTGTGGCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | CGTCACAGCGCTGCTGCTCTGTGTAGCACCCCCAGTTaGCCCCACAGGGTATTTCCCATGGCAAACAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: RHSAAALCSTPS*PHRVFPMANRS Trigger: GCTTCTGTTTGCCATGGGAAATACCCTGTGGGGGCAACTGGGGGTGCTACACAGAGCAGCAGCGCTGTGACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | CTAAGCAAGTGTCTGGTATCTGGGCTGTGTGCACAATaGCACAGCGCTCGCAGGGGCCGTCCCGGTTACTTG | + |
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Preference number: 6 (lower is better) Translates to: LSKCLVSGLCAQ*HSARRGRPGYL Trigger: CAAGTAACCGGGACGGCCCCTGCGAGCGCTGTGGCATTGTGCACACAGCCCAGATACCAGACACTTGCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS TCA 72 bp | ACTTCCCTTCCATCTGCATGGCCACCTCTGGTGCTCTaGGCAGAGGAATTCCCACCTGATCCCACTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TSLPSAWPPLVL*AEEFPPDPTVA Trigger: GGCCACAGTGGGATCAGGTGGGAATTCCTCTGCTCAGAGCACCAGAGGTGGCCATGCAGATGGAAGGGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | GAGCAGCAGGCCACAGATGAGGCTCCCGATGACTGCTaGTGTTATGACTCTGGTAGGCACAATGACTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: EQQATDEAPDDC*CYDSGRHNDWA Trigger: TGCCCAGTCATTGTGCCTACCAGAGTCATAACAGCAGCAGTCATCGGGAGCCTCATCTGTGGCCTGCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | ACTGCGGTGTCCAGCTGTCTCAAAGGACTCCGGTTCTaGGTAGTGGAGCTCGATCGACCTAGTGTAAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: TAVSSCLKGLRF*VVELDRPSVKR Trigger: CCGCTTTACACTAGGTCGATCGAGCTCCACTACCCAGAACCGGAGTCCTTTGAGACAGCTGGACACCGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | CATTTCGACGTCATCGTCGTCTTCTCGTCCACTCACTaGGGTGTCCAGCTGTCTCAAAGGACTCCGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: HFDVIVVFSSTH*GVQLSQRTPVL Trigger: CAGAACCGGAGTCCTTTGAGACAGCTGGACACCGCAGTGAGTGGACGAGAAGACGACGATGACGTCGAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS TCA 72 bp | TATGAGCCAGCTGCAGTTGACTTGGGCAGGATAGTCTaGAGGCCAGCCTGGACTCGTGATTATTCCACTCGG | + |
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Preference number: 6 (lower is better) Translates to: YEPAAVDLGRIV*RPAWTRDYSTR Trigger: CCGAGTGGAATAATCACGAGTCCAGGCTGGCCTTCAGACTATCCTGCCCAAGTCAACTGCAGCTGGCTCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | GTAGCACCCCCAGTTGCCCCCACAGGGTATTTCCCATaGCAAACAGAAGCCATCGACTTGGTAAGTAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: VAPPVAPTGYFP*QTEAIDLVSSV Trigger: AACGCTACTTACCAAGTCGATGGCTTCTGTTTGCCATGGGAAATACCCTGTGGGGGCAACTGGGGGTGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS TCA 72 bp | CTTGGGCAGGATAGTCTGAAGGCCAGCCTGGACTCGTaGTTATTCCACTCGGTGCTCGAATTTGTTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LGQDSLKASLDS*LFHSVLEFVLD Trigger: GTCCAGAACAAATTCGAGCACCGAGTGGAATAATCACGAGTCCAGGCTGGCCTTCAGACTATCCTGCCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | TTGGCACATGGTACAATTGATTTCATCCCTTCCGTTTaGGCAATGCCAGTACCCGTCACAGCGCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LAHGTIDFIPSV*AMPVPVTALLL Trigger: GAGCAGCAGCGCTGTGACGGGTACTGGCATTGCCCAAACGGAAGGGATGAAATCAATTGTACCATGTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS TCA 72 bp | CAGACAGGAAAATCTTCTACGGGTGGGATTAGTCCCTaGGCGATCAACTGTCCATATGAGGGAGGAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QTGKSSTGGISP*AINCPYEGGAS Trigger: AGAGGCTCCTCCCTCATATGGACAGTTGATCGCTCAGGGACTAATCCCACCCGTAGAAGATTTTCCTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | CTGAGGCAAGGTCAAGAAGAGGTCTGGAGCAGTCATTaGCATCAATGTCCGAAGCTCCGTCTGAAACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LRQGQEEVWSSH*HQCPKLRLKLE Trigger: TTCCAGTTTCAGACGGAGCTTCGGACATTGATGCCAATGACTGCTCCAGACCTCTTCTTGACCTTGCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | TTTCCTGCACTGTGTGGCTGTCTAAACCCTTGTACTTaGTCTGAGGCAAGGTCAAGAAGAGGTCTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FPALCGCLNPCT*SEARSRRGLEQ Trigger: CTGCTCCAGACCTCTTCTTGACCTTGCCTCAGACCAAGTACAAGGGTTTAGACAGCCACACAGTGCAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | GCAAAGCCTCGTCATCACTCGTTTCCGTCTTCACTGTaGCTTCTAAGCAAGTGTCTGGTATCTGGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: AKPRHHSFPSSL*LLSKCLVSGLC Trigger: ACACAGCCCAGATACCAGACACTTGCTTAGAAGCCACAGTGAAGACGGAAACGAGTGATGACGAGGCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CAA 72 bp | TCTGAGGCAAGGTCAAGAAGAGGTCTGGAGCAGTCATaGGCATCAATGTCCGAAGCTCCGTCTGAAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SEARSRRGLEQS*ASMSEAPSETG Trigger: TCCAGTTTCAGACGGAGCTTCGGACATTGATGCCAATGACTGCTCCAGACCTCTTCTTGACCTTGCCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CAA 90 bp | GTTGCCCCCACAGGGTATTTCCCATGGCAAACAGAAGCCATCGACTaGGTAAGTAGCGTTGAACCCTCTTGCAGCATTCACTTTATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VAPTGYFPWQTEAID*VSSVEPSCSIHFIS Trigger: GCTGATAAAGTGAATGCTGCAAGAGGGTTCAACGCTACTTACCAAGTCGATGGCTTCTGTTTGCCATGGGAAATACCCTGTGGGGGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS TCA 72 bp | TGCACTGTGTGGCTGTCTAAACCCTTGTACTTGGTCTaGGGCAAGGTCAAGAAGAGGTCTGGAGCAGTCATT | + |
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Preference number: 6 (lower is better) Translates to: CTVWLSKPLYLV*GKVKKRSGAVI Trigger: AATGACTGCTCCAGACCTCTTCTTGACCTTGCCTCAGACCAAGTACAAGGGTTTAGACAGCCACACAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | TTTCATCAGAGCCGTTCGGACAATGGTTTTGGTAGTTaGAGCGATCAGAACGAGGGTAGCAGACACCATTTC | + |
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Preference number: 6 (lower is better) Translates to: FHQSRSDNGFGS*SDQNEGSRHHF Trigger: GAAATGGTGTCTGCTACCCTCGTTCTGATCGCTGCAACTACCAAAACCATTGTCCGAACGGCTCTGATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CAA 72 bp | ACAGGGTATTTCCCATGGCAAACAGAAGCCATCGACTaGGTAAGTAGCGTTGAACCCTCTTGCAGCATTCAC | + |
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Preference number: 6 (lower is better) Translates to: TGYFPWQTEAID*VSSVEPSCSIH Trigger: GTGAATGCTGCAAGAGGGTTCAACGCTACTTACCAAGTCGATGGCTTCTGTTTGCCATGGGAAATACCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CAA 90 bp | TGTACTTGGTCTGAGGCAAGGTCAAGAAGAGGTCTGGAGCAGTCATaGGCATCAATGTCCGAAGCTCCGTCTGAAACTGGAATTAGCATT | + |
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Preference number: 6 (lower is better) Translates to: CTWSEARSRRGLEQS*ASMSEAPSETGISI Trigger: AATGCTAATTCCAGTTTCAGACGGAGCTTCGGACATTGATGCCAATGACTGCTCCAGACCTCTTCTTGACCTTGCCTCAGACCAAGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CAA 90 bp | TGGACCCACACGCTCGGTAACTTTCAATATTCTTGTATGTTTCTATaGTCAGCCAGTCCAAAGTGCATCTTCTGGACCCCTGGATATCAA | + |
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Preference number: 6 (lower is better) Translates to: WTHTLGNFQYSCMFL*SASPKCIFWTPGYQ Trigger: TTGATATCCAGGGGTCCAGAAGATGCACTTTGGACTGGCTGACAATAGAAACATACAAGAATATTGAAAGTTACCGAGCGTGTGGGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS GCA 72 bp | GAAGCCATCGACTTGGTAAGTAGCGTTGAACCCTCTTaGAGCATTCACTTTATCAGCACAGAAATGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: EAIDLVSSVEPS*SIHFISTEMYS Trigger: AGAGTACATTTCTGTGCTGATAAAGTGAATGCTGCAAGAGGGTTCAACGCTACTTACCAAGTCGATGGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS TCA 72 bp | AACATGGAAATTCTTCCTTTTGGCACATGGTACAATTaGTTTCATCCCTTCCGTTTGGGCAATGCCAGTACC | + |
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Preference number: 6 (lower is better) Translates to: NMEILPFGTWYN*FHPFRLGNAST Trigger: GGTACTGGCATTGCCCAAACGGAAGGGATGAAATCAATTGTACCATGTGCCAAAAGGAAGAATTTCCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS TCA 72 bp | TCTCCATCTCCCGAGACCAAAGCCAATGACCCTGAATaGCGGGATCTTGCAAAATTAAAAATACGATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SPSPETKANDPE*RDLAKLKIRFQ Trigger: TTGGAATCGTATTTTTAATTTTGCAAGATCCCGTCATTCAGGGTCATTGGCTTTGGTCTCGGGAGATGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CAA 72 bp | ACGCTCGGTAACTTTCAATATTCTTGTATGTTTCTATaGTCAGCCAGTCCAAAGTGCATCTTCTGGACCCCT | + |
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Preference number: 6 (lower is better) Translates to: TLGNFQYSCMFL*SASPKCIFWTP Trigger: AGGGGTCCAGAAGATGCACTTTGGACTGGCTGACAATAGAAACATACAAGAATATTGAAAGTTACCGAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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| CDS CCA 72 bp | ATCAGAACGAGGGTAGCAGACACCATTTCGAGAACATaGAAATTCTTCCTTTTGGCACATGGTACAATTGAT | + |
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Preference number: 6 (lower is better) Translates to: IRTRVADTISRT*KFFLLAHGTID Trigger: ATCAATTGTACCATGTGCCAAAAGGAAGAATTTCCATGTTCTCGAAATGGTGTCTGCTACCCTCGTTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022916.13 ENSMUST00000110305.3 |
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