Pregenerated sensors for LRP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019796Ensembl transcript IDs: ENSMUST00000019931.12, ENSMUST00000124961.2, ENSMUST00000130590.8, ENSMUST00000134346.8, ENSMUST00000135907.8
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGGTGTGGCAGCTACCACCTTGGCCTGGTCAGAAGCATAGGGTaGGGCTGGGTGGAGAACCTATATTCCTCCCCTGTGGGACATCAC | + |
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Preference number: 1 (lower is better) Translates to: ARCGSYHLGLVRSIG*GWVENLYSSPVGHH Trigger: GTGATGTCCCACAGGGGAGGAATATAGGTTCTCCACCCAGCCCCACCCTATGCTTCTGACCAGGCCAAGGTGGTAGCTGCCACACCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR CCA 90 bp | AAAAGGGATTCTTCTAAGGTCAGCCAGGTGTGGCAGCTACCACCTTaGCCTGGTCAGAAGCATAGGGTGGGGCTGGGTGGAGAACCTATA | + |
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Preference number: 1 (lower is better) Translates to: KRDSSKVSQVWQLPP*PGQKHRVGLGGEPI Trigger: TATAGGTTCTCCACCCAGCCCCACCCTATGCTTCTGACCAGGCCAAGGTGGTAGCTGCCACACCTGGCTGACCTTAGAAGAATCCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR CCA 90 bp | TGGGAAGGTCTGCCTTTACTGTCTACAAACTTAAAGGTGTTAAGCTaGATGCCAGTTTCCTGCAAAGGGGAACTTGTGCAAAAGTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: WEGLPLLSTNLKVLS*MPVSCKGELVQKCF Trigger: AAAGCACTTTTGCACAAGTTCCCCTTTGCAGGAAACTGGCATCCAGCTTAACACCTTTAAGTTTGTAGACAGTAAAGGCAGACCTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR TCA 90 bp | TCACAAATAAAAGGCAGGACTTCCATCTGTCACCTTGTCACATGCTaGCTTTCTGTCTCAGCAAACAAGCTTCAGTCTTATGAATTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SQIKGRTSICHLVTC*LSVSANKLQSYEFL Trigger: GAGGAATTCATAAGACTGAAGCTTGTTTGCTGAGACAGAAAGTCAGCATGTGACAAGGTGACAGATGGAAGTCCTGCCTTTTATTTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGTCCCACCTCCAGCCCTGCAAGACACACGAAGGGAAGCATCAGGACCCAGTCCCTCTCCTCTGCTaGCAGCTTGTTCTCATTTCA | + |
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Preference number: 2 (lower is better) Translates to: PGSHLQPCKTHEGKHQDPVPLLC*QLVLIS Trigger: TGAAATGAGAACAAGCTGGCAGCAGAGGAGAGGGAC...TGGGTCCTGATGCTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGACCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCACCTCCAGCCCTGCAAGACACACGAAGGGAAGCATCAGGACCCATTCCCTATTTGCTTTTGCCTaGCAGGTCCCTCTCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GPTSSPARHTKGSIRTHSLFAFA*QVPLLC Trigger: GCAGAGGAGAGGGACCTGGCAGGCAAAAGCAAATAG...GGAATGGGTCCTGATGCTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTACGAATCCCACGGCTGGGGTTCTATTTGCTTTTGCCTGCCAGGTCCCTAGCATAGGGTGGGGCTaGGTGGAGAACCTATATTCC | + |
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Preference number: 2 (lower is better) Translates to: VLTNPTAGVLFAFACQVPSIGWG*VENLYS Trigger: GGAATATAGGTTCTCCACCCAGCCCCACCCTATGCT...AGGGACCTGGCAGGCAAAAGCAAATAGAACCCCAGCCGTGGGATTCGTAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGTCCCACCTCCAGCCCTaGAAGACACACGAAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SCKGELVQKCFLLWKYILSHLQP*KTHEGK Trigger: CTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGA...CAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCTCTGCTGCCAGCTTGTTCTCATTTCATAACCACCTACAGTTGCCCCTAAGCATAGGGTGGGGCTaGGTGGAGAACCTATATTCC | + |
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Preference number: 2 (lower is better) Translates to: LSSAASLFSFHNHLQLPLSIGWG*VENLYS Trigger: GGAATATAGGTTCTCCACCCAGCCCCACCCTATGCT...TAGGGGCAACTGTAGGTGGTTATGAAATGAGAACAAGCTGGCAGCAGAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTCCATGAAGCAGCATTGAGTAGATTGTCCTTACGAATCCCACGGCTGGGGCACCTTGTCACATGCTaGCTTTCTGTCTCAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PFHEAALSRLSLRIPRLGHLVTC*LSVSAN Trigger: GTTTGCTGAGACAGAAAGTCAGCATGTGACAAGGTG...CCCCAGCCGTGGGATTCGTAAGGACAATCTACTCAATGCTGCTTCATGGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACCTGTACGAATCCCACGGCTaGGGTTCTATTTGCTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: KQAPHCSPLRVASRVYNLYESHG*GSICFC Trigger: GCAAAAGCAAATAGAACCCCAGCCGTGGGATTCGTA...CAGGTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTCCATGAAGCAGCATTGAGTAGATTGTCCTTACGAATCCCACGGCTGGGGATTCCTCTCTACCTTTaGAGACATTGTACATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PFHEAALSRLSLRIPRLGIPLYL*RHCTSQ Trigger: CTGGGATGTACAATGTCTTCAAAGGTAGAGAGGAAT...CCCCAGCCGTGGGATTCGTAAGGACAATCTACTCAATGCTGCTTCATGGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR TCA 90 bp | GATTATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACCACCTTGTCACATGCTaGCTTTCTGTCTCAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: DYKQAPHCSPLRVASRVYHLVTC*LSVSAN Trigger: GTTTGCTGAGACAGAAAGTCAGCATGTGACAAGGTG...GTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CCA 90 bp | TATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACATAGGGGCCAGCAGTTaGCACCTCACAAATAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: YKQAPHCSPLRVASRVYNIGASS*HLTNKR Trigger: CCTTTTATTTGTGAGGTGCCAACTGCTGGCCCCTAT...GTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR TCA 90 bp | TCACATGCTGACTTTCTGTCTCAGCAAACAAGCTTCAGTCTTATGAATTCCTCTTGGGCCGGGCTTTCTTaGGTTTCTGCTTCACCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SHADFLSQQTSFSLMNSSWAGLS*VSASPV Trigger: GACTGGTGAAGCAGAAACTCAAGAAAGCCCGGCCCA...AGAGGAATTCATAAGACTGAAGCTTGTTTGCTGAGACAGAAAGTCAGCATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTATATTCCCTCACCAAAATCAAACCCCTTGTTAAAGGAACCACCTACTTTAGGCTGGGGTTCTATTTaGTTTTGCCTGCCAGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: GYIPSPKSNPLLKEPPTLGWGSI*FCLPGP Trigger: GGGACCTGGCAGGCAAAAGCAAATAGAACCCCAGCC...TAAAGTAGGTGGTTCCTTTAACAAGGGGTTTGATTTTGGTGAGGGAATATAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGACAAGAAAGTGTAGCTCATaGGAACTCAGTGGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CKGELVQKCFLLWKYILTRKCSS*ELSGEK Trigger: CTTCTCTCCACTGAGTTCTCATGAGCTACACTTTCT...TGTCAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTATATTCCCTCACCAAAATCAAACCCCTTGTTAAAGGAACCACCTACTTTAGTCCCTCTCCTCTGCTaGCAGCTTGTTCTCATTTCA | + |
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Preference number: 2 (lower is better) Translates to: GYIPSPKSNPLLKEPPTLVPLLC*QLVLIS Trigger: TGAAATGAGAACAAGCTGGCAGCAGAGGAGAGGGAC...TAAAGTAGGTGGTTCCTTTAACAAGGGGTTTGATTTTGGTGAGGGAATATAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGACATTAATAGGGGCCAGCAGTTaGCACCTCACAAATAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KGELVQKCFLLWKYILTLIGASS*HLTNKR Trigger: CCTTTTATTTGTGAGGTGCCAACTGCTGGCCCCTAT...TAATGTCAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTATATTCCCTCACCAAAATCAAACCCCTTGTTAAAGGAACCACCTACTTTACTCATGAGAACTCAGTaGAGAGAAGAGAGCCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GYIPSPKSNPLLKEPPTLLMRTQ*REESQK Trigger: CTTCTGGCTCTCTTCTCTCCACTGAGTTCTCATGAG...TAAAGTAGGTGGTTCCTTTAACAAGGGGTTTGATTTTGGTGAGGGAATATAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGAAGTGCTTTCTGCTCTaGAAATACATCCTGACATTA | + |
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Preference number: 2 (lower is better) Translates to: SCKGELVQKCFLLWKYILKCFLL*KYILTL Trigger: TAATGTCAGGATGTATTTCCAGAGCAGAAAGCACTT...CAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR GCA 90 bp | ACATGCCTTATCAGTTTCTATTTACTGGGTATGGCTATAGGTGACCTCTATGAAGCAAAGGGGAACTTGTaGAAAAGTGCTTTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TCLISFYLLGMAIGDLYEAKGNL*KSAFCS Trigger: AGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGC...TTCATAGAGGTCACCTATAGCCATACCCAGTAAATAGAAACTGATAAGGCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR CAA 90 bp | CAAACAAGCTTCAGTCTTATGAATTCCTCTCTACCTTTGAAGACATaGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: QTSFSLMNSSLPLKT*YIPGKLFHDKSRLV Trigger: CACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCTTCAAAGGTAGAGAGGAATTCATAAGACTGAAGCTTGTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
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| 3UTR CAA 90 bp | CTGTCTCAGCAAACAAGCTTCAGTCTTATGAATTCCTCTCTACCTTaGAAGACATTGTACATCCCAGGGAAATTATTTCATGATAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LSQQTSFSLMNSSLP*KTLYIPGKLFHDKS Trigger: TGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCTTCAAAGGTAGAGAGGAATTCATAAGACTGAAGCTTGTTTGCTGAGACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
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| 3UTR CAA 90 bp | AGACATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTaGTGTTTGCACTGTCTTCTAGCACAGTTTAAAACAAAACATCTT | + |
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Preference number: 2 (lower is better) Translates to: RHCTSQGNYFMISQG*CLHCLLAQFKTKHL Trigger: AAGATGTTTTGTTTTAAACTGTGCTAGAAGACAGTGCAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
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| 3UTR CCA 72 bp | GGCAGCTACCACCTTGGCCTGGTCAGAAGCATAGGGTaGGGCTGGGTGGAGAACCTATATTCCTCCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: GSYHLGLVRSIG*GWVENLYSSPV Trigger: CACAGGGGAGGAATATAGGTTCTCCACCCAGCCCCACCCTATGCTTCTGACCAGGCCAAGGTGGTAGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGGGTCCCACCTCCAGCCCTGCAAGACACACGAAGGGAAGCATCAGGACCCACATAACCACCTACAGTaGCCCCTAGCCAAAAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: PGSHLQPCKTHEGKHQDPHNHLQ*PLAKRD Trigger: ATCCCTTTTGGCTAGGGGCAACTGTAGGTGGTTATG...TGGGTCCTGATGCTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGACCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR GCA 72 bp | GATTGTCCTTACGAATCCCACGGCTGGGGTTCTATTTaGTTTTGCCTGCCAGGTCCCTCTCCTCTGCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: DCPYESHGWGSI*FCLPGPSPLLP Trigger: TGGCAGCAGAGGAGAGGGACCTGGCAGGCAAAAGCAAATAGAACCCCAGCCGTGGGATTCGTAAGGACAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR CCA 72 bp | CTAGCCAAAAGGGATTCTTCTAAGGTCAGCCAGGTGTaGCAGCTACCACCTTGGCCTGGTCAGAAGCATAGG | + |
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Preference number: 3 (lower is better) Translates to: LAKRDSSKVSQV*QLPPWPGQKHR Trigger: CCTATGCTTCTGACCAGGCCAAGGTGGTAGCTGCCACACCTGGCTGACCTTAGAAGAATCCCTTTTGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR GCA 72 bp | TCCTCAGATGTAATGGGCCGGGCTTTCTTGAGTTTCTaGTTCACCAGTCGGAGTCGGCATGTCACCATGAGA | + |
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Preference number: 3 (lower is better) Translates to: SSDVMGRAFLSF*FTSRSRHVTMR Trigger: TCTCATGGTGACATGCCGACTCCGACTGGTGAAGCAGAAACTCAAGAAAGCCCGGCCCATTACATCTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
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| 3UTR CCA 72 bp | AGCCAGAAGATAAGAAAGCTGATAGGGGCCAGCAGTTaGCACCTCACAAATAAAAGGCAGGACTTCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: SQKIRKLIGASS*HLTNKRQDFHL Trigger: CAGATGGAAGTCCTGCCTTTTATTTGTGAGGTGCCAACTGCTGGCCCCTATCAGCTTTCTTATCTTCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGCCAGCTTGTTCTCATTTCATAACCACCTACAGTTGCCCCTAGCCAAAAGGCTACCTTTGAAGACATaGTACATCCCAGGGAAATTA | + |
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Preference number: 3 (lower is better) Translates to: AASLFSFHNHLQLPLAKRLPLKT*YIPGKL Trigger: TAATTTCCCTGGGATGTACAATGTCTTCAAAGGTAG...CCTTTTGGCTAGGGGCAACTGTAGGTGGTTATGAAATGAGAACAAGCTGGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGACACTTCCATCTGTCACCTaGTCACATGCTGACTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: CKGELVQKCFLLWKYILTLPSVT*SHADFL Trigger: CAGAAAGTCAGCATGTGACAAGGTGACAGATGGAAG...TGTCAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CAA 90 bp | GATTATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACTTCCATGAAGCAGCATaGAGTAGATTGTCCTTACGA | + |
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Preference number: 3 (lower is better) Translates to: DYKQAPHCSPLRVASRVYFHEAA*SRLSLR Trigger: TCGTAAGGACAATCTACTCAATGCTGCTTCATGGAA...GTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR TCA 72 bp | AAAGGCAGGACTTCCATCTGTCACCTTGTCACATGCTaGCTTTCTGTCTCAGCAAACAAGCTTCAGTCTTAT | + |
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Preference number: 3 (lower is better) Translates to: KGRTSICHLVTC*LSVSANKLQSY Trigger: ATAAGACTGAAGCTTGTTTGCTGAGACAGAAAGTCAGCATGTGACAAGGTGACAGATGGAAGTCCTGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR GCA 72 bp | ATGCCAGTTTCCTGCAAAGGGGAACTTGTGCAAAAGTaGTTTCTGCTCTGGAAATACATCCTGACATTAGCT | + |
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Preference number: 3 (lower is better) Translates to: MPVSCKGELVQK*FLLWKYILTLA Trigger: AGCTAATGTCAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGAAACTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR GCA 72 bp | ACAAACTTAAAGGTGTTAAGCTGGATGCCAGTTTCCTaGAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: TNLKVLSWMPVS*KGELVQKCFLL Trigger: GAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGAAACTGGCATCCAGCTTAACACCTTTAAGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR CCA 72 bp | CTGCCTTTACTGTCTACAAACTTAAAGGTGTTAAGCTaGATGCCAGTTTCCTGCAAAGGGGAACTTGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: LPLLSTNLKVLS*MPVSCKGELVQ Trigger: TTGCACAAGTTCCCCTTTGCAGGAAACTGGCATCCAGCTTAACACCTTTAAGTTTGTAGACAGTAAAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGACATTACTTCCATCTGTCACCTaGTCACATGCTGACTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: KGELVQKCFLLWKYILTLLPSVT*SHADFL Trigger: CAGAAAGTCAGCATGTGACAAGGTGACAGATGGAAG...TAATGTCAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR CCA 72 bp | TGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTaGAAATACATCCTGACATTAGCTGATTGTACATTA | + |
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Preference number: 3 (lower is better) Translates to: CKGELVQKCFLL*KYILTLADCTL Trigger: TAATGTACAATCAGCTAATGTCAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR-3UTR CAA 90 bp | TGGACATGGCAACATGTTTACAAACACCCAGACATCACCTTTTGGATTGATAATCTACCTTTGAAGACATaGTACATCCCAGGGAAATTA | + |
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Preference number: 3 (lower is better) Translates to: WTWQHVYKHPDITFWIDNLPLKT*YIPGKL Trigger: TAATTTCCCTGGGATGTACAATGTCTTCAAAGGTAG...ATTATCAATCCAAAAGGTGATGTCTGGGTGTTTGTAAACATGTTGCCATGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| 3UTR CCA 72 bp | CTACTTTATATTGAGTCTAAACTAATGAGACTACAGTaGTTTTTAGTGTTTTGTAACGTTTGCCACTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LLYIESKLMRLQ*FLVFCNVCHSG Trigger: CCCTGAGTGGCAAACGTTACAAAACACTAAAAACCACTGTAGTCTCATTAGTTTAGACTCAATATAAAGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| CDS-3UTR GCA 90 bp | CCTGGGTCCCACCTCCAGCCCTGCAAGACACACGAAGGGAAGCATCAGGACCCAGGAGTGGCGCGAACTTaGAGACGCTGCGGCCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PGSHLQPCKTHEGKHQDPGVART*RRCGRA Trigger: CGCGCGGCCGCAGCGTCTGCAAGTTCGCGCCACTCC...TGGGTCCTGATGCTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGACCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| CDS-3UTR GCA 90 bp | GCCAAAAGGGATTCTTCTAAGGTCAGCCAGGTGTGGCAGCTACCACCTTGGCCTCCGCACGCTCCCGGGTaGGCGCAGGAAGCTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AKRDSSKVSQVWQLPPWPPHAPG*AQEAGS Trigger: GGAGCCAGCTTCCTGCGCGCACCCGGGAGCGTGCGG...AGGCCAAGGTGGTAGCTGCCACACCTGGCTGACCTTAGAAGAATCCCTTTTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| CDS-3UTR CCA 90 bp | GGTCCCACCTCCAGCCCTGCAAGACACACGAAGGGAAGCATCAGGACCCATTCCGCGGTACCCGCGGAGTaGCGCGAACTTGCAGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPTSSPARHTKGSIRTHSAVPAE*RELADA Trigger: AGCGTCTGCAAGTTCGCGCCACTCCGCGGGTACCGC...GGAATGGGTCCTGATGCTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | GTAATGGGCCGGGCTTTCTTGAGTTTCTGCTTCACCAGTCGGAGTCGGCATGTCGGAGTGGCGCGAACTTaGAGACGCTGCGGCCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: VMGRAFLSFCFTSRSRHVGVART*RRCGRA Trigger: CGCGCGGCCGCAGCGTCTGCAAGTTCGCGCCACTCC...GACATGCCGACTCCGACTGGTGAAGCAGAAACTCAAGAAAGCCCGGCCCATTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTTACGAATCCCACGGCTGGGGTTCTATTTGCTTTTGCCTGCCAGGTCCCTCGCGCGCCGTGCAGTTaGACAGGTAGCAGCGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLTNPTAGVLFAFACQVPRAPCS*TGSSGV Trigger: CACCCCGCTGCTACCTGTTCAACTGCACGGCGCGCG...AGGGACCTGGCAGGCAAAAGCAAATAGAACCCCAGCCGTGGGATTCGTAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACCTGGGCCCCCGGGGCAGCTaGACCACTGCCACCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQAPHCSPLRVASRVYNLGPRGS*TTATEQ Trigger: CTGCTCGGTGGCAGTGGTGCAGCTGCCCCGGGGGCC...CAGGTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTCCCACCTCCAGCCCTGCAAGACACACGAAGGGAAGCATCAGGACCCATGGGCCGGGCTTTCTTaGGTTTCTGCTTCACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSHLQPCKTHEGKHQDPWAGLS*VSASPV Trigger: GACTGGTGAAGCAGAAACTCAAGAAAGCCCGGCCCA...TGGGTCCTGATGCTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGACCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019931.12 |
||
| CDS-3UTR GCA 90 bp | ATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCGAGCTGCCGCACGCTCCCGGGTaGGCGCAGGAAGCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MIEPKEQIVSDSHPCPELPHAPG*AQEAGS Trigger: GGAGCCAGCTTCCTGCGCGCACCCGGGAGCGTGCGG...CAGCTCGGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGAGCCAGAAGATAAGAAAGCTGATAGGGGCCAGCAGTTGGCACCTCACCGAACTTGCAGACGCTaGGGCCGCGCGCCGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RREPEDKKADRGQQLAPHRTCRR*GRAPCS Trigger: ACTGCACGGCGCGCGGCCGCAGCGTCTGCAAGTTCG...GTGAGGTGCCAACTGCTGGCCCCTATCAGCTTTCTTATCTTCTGGCTCTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTGTCACCTTGTCACATGCTGACTTTCTGTCTCAGCAAACAAGCTTCAGTGGCCCCCGGGGCAGCTaGACCACTGCCACCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSVTLSHADFLSQQTSFSGPRGS*TTATEQ Trigger: CTGCTCGGTGGCAGTGGTGCAGCTGCCCCGGGGGCC...ACTGAAGCTTGTTTGCTGAGACAGAAAGTCAGCATGTGACAAGGTGACAGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR GCA 90 bp | GATTATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACCGAACTTGCAGACGCTaGGGCCGCGCGCCGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DYKQAPHCSPLRVASRVYRTCRR*GRAPCS Trigger: ACTGCACGGCGCGCGGCCGCAGCGTCTGCAAGTTCG...GTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGAGAACTCAGTGGAGAGAAGAGAGCCAGAAGATAAGAAAGCTGATAGGGGCTTCCGGGGCCGGGTaGTCCCCTCCTGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMRTQWREESQKIRKLIGASGAG*SPPAWP Trigger: TGGCCAAGCAGGAGGGGAGCACCCGGCCCCGGAAGC...CCCTATCAGCTTTCTTATCTTCTGGCTCTCTTCTCTCCACTGAGTTCTCATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTCTGCTGCCAGCTTGTTCTCATTTCATAACCACCTACAGTTGCCCCTAGTGCGCGCAGGAAGCTaGCTCCCGCCGCGATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSAASLFSFHNHLQLPLVRAGS*LPPRWN Trigger: ATTCCATCGCGGCGGGAGCCAGCTTCCTGCGCGCAC...TAGGGGCAACTGTAGGTGGTTATGAAATGAGAACAAGCTGGCAGCAGAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTCCCACCTCCAGCCCTGCAAGACACACGAAGGGAAGCATCAGGACCCAGAACTACCCCGTCTGTaGGCAGATGTAAAACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGSHLQPCKTHEGKHQDPELPRL*ADVKPH Trigger: ATGTGGTTTTACATCTGCCCACAGACGGGGTAGTTC...TGGGTCCTGATGCTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGACCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | TTAATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCGAGGGAGTGGCGCGAACTTaGAGACGCTGCGGCCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LMIEPKEQIVSDSHPCPEGVART*RRCGRA Trigger: CGCGCGGCCGCAGCGTCTGCAAGTTCGCGCCACTCC...CTCGGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCCACCTCCAGCCCTGCAAGACACACGAAGGGAAGCATCAGGACCCATTCCGAACTACCCCGTCTGTaGGCAGATGTAAAACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GPTSSPARHTKGSIRTHSELPRL*ADVKPH Trigger: ATGTGGTTTTACATCTGCCCACAGACGGGGTAGTTC...GGAATGGGTCCTGATGCTTCCCTTCGTGTGTCTTGCAGGGCTGGAGGTGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | CCATTCCATGAAGCAGCATTGAGTAGATTGTCCTTACGAATCCCACGGCTGGGGCTGGCGCCTTCTGGGTaGAGTGGATCCTCGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFHEAALSRLSLRIPRLGLAPSG*SGSSSL Trigger: CAGAGACGAGGATCCACTCCACCCAGAAGGCGCCAG...CCCCAGCCGTGGGATTCGTAAGGACAATCTACTCAATGCTGCTTCATGGAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| 3UTR CAA 72 bp | AGATTGTCCTTACGAATCCCACGGCTGGGGTTCTATTaGCTTTTGCCTGCCAGGTCCCTCTCCTCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLRIPRLGFY*LLPARSLSSAA Trigger: GGCAGCAGAGGAGAGGGACCTGGCAGGCAAAAGCAAATAGAACCCCAGCCGTGGGATTCGTAAGGACAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTCTGCTGCCAGCTTGTTCTCATTTCATAACCACCTACAGTTGCCCCTACCCATGGCTCCTGGCTaGGCAGAAGTAGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSAASLFSFHNHLQLPLPMAPG*AEVATV Trigger: CACAGTGGCTACTTCTGCCCAGCCAGGAGCCATGGG...TAGGGGCAACTGTAGGTGGTTATGAAATGAGAACAAGCTGGCAGCAGAGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTAATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCCGCGCGCCGTGCAGTTaGACAGGTAGCAGCGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILMIEPKEQIVSDSHPCPRAPCS*TGSSGV Trigger: CACCCCGCTGCTACCTGTTCAACTGCACGGCGCGCG...GGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCATTAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCCAGCTTGTTCTCATTTCATAACCACCTACAGTTGCCCCTAGCCAAAAGGGCCTGGGAAGCACAGTaGCAGAGACGTTATCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AASLFSFHNHLQLPLAKRAWEAQ*QRRYRS Trigger: GCTCCGATAACGTCTCTGTCACTGTGCTTCCCAGGC...CCTTTTGGCTAGGGGCAACTGTAGGTGGTTATGAAATGAGAACAAGCTGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | CATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGCACCCGCACGCTCCCGGGTaGGCGCAGGAAGCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCTSQGNYFMISQGLCLHPHAPG*AQEAGS Trigger: GGAGCCAGCTTCCTGCGCGCACCCGGGAGCGTGCGG...GTGCAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | TTAATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCGAGGCGGTACCCGCGGAGTaGCGCGAACTTGCAGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMIEPKEQIVSDSHPCPEAVPAE*RELADA Trigger: AGCGTCTGCAAGTTCGCGCCACTCCGCGGGTACCGC...CTCGGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTGCTTCACCAGTCGGAGTCGGCATGTCACCATGAGAAGCAACAAAACACCCATGGCTCCTGGCTaGGCAGAAGTAGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFCFTSRSRHVTMRSNKTPMAPG*AEVATV Trigger: CACAGTGGCTACTTCTGCCCAGCCAGGAGCCATGGG...TGTTTTGTTGCTTCTCATGGTGACATGCCGACTCCGACTGGTGAAGCAGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAAAGGGATTCTTCTAAGGTCAGCCAGGTGTGGCAGCTACCACCTTGGCCTCTTCATTTAATCCCATaGCTCCTGGCTGGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKRDSSKVSQVWQLPPWPLHLIP*LLAGQK Trigger: CTTCTGCCCAGCCAGGAGCCATGGGATTAAATGAAG...AGGCCAAGGTGGTAGCTGCCACACCTGGCTGACCTTAGAAGAATCCCTTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAAAGGGATTCTTCTAAGGTCAGCCAGGTGTGGCAGCTACCACCTTGGCCTTGGGTAGTGGCTCTCTaGGATTTTTCCAACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKRDSSKVSQVWQLPPWPWVVAL*DFSNLG Trigger: CCCCAAGTTGGAAAAATCCCAGAGAGCCACTACCCA...AGGCCAAGGTGGTAGCTGCCACACCTGGCTGACCTTAGAAGAATCCCTTTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | ATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCGAGCTGCTGGCGCCTTCTGGGTaGAGTGGATCCTCGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MIEPKEQIVSDSHPCPELLAPSG*SGSSSL Trigger: CAGAGACGAGGATCCACTCCACCCAGAAGGCGCCAG...CAGCTCGGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | TATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACGCCGCGATGGAATCCTaGGTGCGGATGATGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: YKQAPHCSPLRVASRVYNAAMES*VRMMVS Trigger: CGATACCATCATCCGCACCCAGGATTCCATCGCGGC...GTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | TATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACCAGCCTCAGGGTTCCTaGCTGAGGCACCTTCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKQAPHCSPLRVASRVYNQPQGS*LRHLHV Trigger: GACATGAAGGTGCCTCAGCCAGGAACCCTGAGGCTG...GTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGAACTCAGTGGAGAGAAGAGAGCCAGAAGATAAGAAAGCTGATAGGGGCCTTCTGGGTGGAGTaGATCCTCGTCTCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMRTQWREESQKIRKLIGAFWVE*ILVSGW Trigger: CCACCCAGAGACGAGGATCCACTCCACCCAGAAGGC...CCCTATCAGCTTTCTTATCTTCTGGCTCTCTTCTCTCCACTGAGTTCTCATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | CTCATGAGAACTCAGTGGAGAGAAGAGAGCCAGAAGATAAGAAAGCTGATAGGGCACCTTCATGTCCACTaGCGATGGGTCACCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMRTQWREESQKIRKLIGHLHVH*RWVTLL Trigger: CAGCAGGGTGACCCATCGTCAGTGGACATGAAGGTG...CCCTATCAGCTTTCTTATCTTCTGGCTCTCTTCTCTCCACTGAGTTCTCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | ATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCGAGCTGTCTTTCCTGAGGAATTaGTGTCTGGCCGGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MIEPKEQIVSDSHPCPELSFLRN*CLAGEG Trigger: TCCCTCCCCGGCCAGACAGCAATTCCTCAGGAAAGA...CAGCTCGGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGCCTTCTGGGTGGAGTaGATCCTCGTCTCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLQRGTCAKVLSALEIHPAFWVE*ILVSGW Trigger: CCACCCAGAGACGAGGATCCACTCCACCCAGAAGGC...AGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | CCATCTGTCACCTTGTCACATGCTGACTTTCTGTCTCAGCAAACAAGCTTCAGTTGGGCCGGGCTTTCTTaGGTTTCTGCTTCACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSVTLSHADFLSQQTSFSWAGLS*VSASPV Trigger: GACTGGTGAAGCAGAAACTCAAGAAAGCCCGGCCCA...ACTGAAGCTTGTTTGCTGAGACAGAAAGTCAGCATGTGACAAGGTGACAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000135907.8 |
||
| CDS-3UTR GCA 90 bp | AGACATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGCGAACTTGCAGACGCTaGGGCCGCGCGCCGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHCTSQGNYFMISQGLCLRTCRR*GRAPCS Trigger: ACTGCACGGCGCGCGGCCGCAGCGTCTGCAAGTTCG...CAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGTGTTTGCACTGTCTTCTAGCACAGTTTAAAACAAAACATCTTAATGATGCTTCCGGGGCCGGGTaGTCCCCTCCTGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLCLHCLLAQFKTKHLNDASGAG*SPPAWP Trigger: TGGCCAAGCAGGAGGGGAGCACCCGGCCCCGGAAGC...ATCATTAAGATGTTTTGTTTTAAACTGTGCTAGAAGACAGTGCAAACACAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR GCA 90 bp | AAGACATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGCTTCCGGGGCCGGGTaGTCCCCTCCTGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTLYIPGKLFHDKSRLVFASGAG*SPPAWP Trigger: TGGCCAAGCAGGAGGGGAGCACCCGGCCCCGGAAGC...AAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | TTAATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCGAGGCCGCGATGGAATCCTaGGTGCGGATGATGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: LMIEPKEQIVSDSHPCPEAAMES*VRMMVS Trigger: CGATACCATCATCCGCACCCAGGATTCCATCGCGGC...CTCGGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | TGGACATGGCAACATGTTTACAAACACCCAGACATCACCTTTTGGATTGATAATGTGCGCGCAGGAAGCTaGCTCCCGCCGCGATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WTWQHVYKHPDITFWIDNVRAGS*LPPRWN Trigger: ATTCCATCGCGGCGGGAGCCAGCTTCCTGCGCGCAC...ATTATCAATCCAAAAGGTGATGTCTGGGTGTTTGTAAACATGTTGCCATGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | GATTATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACATTGATCTGACTCTCTaGCGCCTTCTGGGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DYKQAPHCSPLRVASRVYIDLTL*RLLGGV Trigger: CACTCCACCCAGAAGGCGCCAGAGAGTCAGATCAAT...GTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACCTGTTCCTGAGGAATTGCTaGCTGGACAGGATTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQAPHCSPLRVASRVYNLFLRNC*LDRIDL Trigger: CAGATCAATCCTGTCCAGCCAGCAATTCCTCAGGAA...CAGGTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
||
| 3UTR CAA 72 bp | CACACCGCTCCATTCCATGAAGCAGCATTGAGTAGATaGTCCTTACGAATCCCACGGCTGGGGTTCTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTAPFHEAALSR*SLRIPRLGFYL Trigger: CAAATAGAACCCCAGCCGTGGGATTCGTAAGGACAATCTACTCAATGCTGCTTCATGGAATGGAGCGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGTCAAGGCTTGTGTTTGCACTGTCTTCTAGCACAGTTTAAAACAAAACATCGCGCGCCGTGCAGTTaGACAGGTAGCAGCGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISQGLCLHCLLAQFKTKHRAPCS*TGSSGV Trigger: CACCCCGCTGCTACCTGTTCAACTGCACGGCGCGCG...ATGTTTTGTTTTAAACTGTGCTAGAAGACAGTGCAAACACAAGCCTTGACTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | TATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACCTTCATTTAATCCCATaGCTCCTGGCTGGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKQAPHCSPLRVASRVYNLHLIP*LLAGQK Trigger: CTTCTGCCCAGCCAGGAGCCATGGGATTAAATGAAG...GTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGAGCCAGAAGATAAGAAAGCTGATAGGGGCCAGCAGTTGGCACCTCACTCAAGAGCCAAGTTTTaGCAGAAGTCTTCATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RREPEDKKADRGQQLAPHSRAKF*QKSSSD Trigger: GTCTGATGAAGACTTCTGTCAAAACTTGGCTCTTGA...GTGAGGTGCCAACTGCTGGCCCCTATCAGCTTTCTTATCTTCTGGCTCTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTGTCACCTTGTCACATGCTGACTTTCTGTCTCAGCAAACAAGCTTCAGTGCTTTCTTGAGTTTCTaGTTCACCAGTCGGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSVTLSHADFLSQQTSFSAFLSF*FTSRSR Trigger: CCGACTCCGACTGGTGAAGCAGAAACTCAAGAAAGC...ACTGAAGCTTGTTTGCTGAGACAGAAAGTCAGCATGTGACAAGGTGACAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTGTGTTTGCACTGTCTTCTAGCACAGTTTAAAACAAAACATCTTAATGATGCGGTACCCGCGGAGTaGCGCGAACTTGCAGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLCLHCLLAQFKTKHLNDAVPAE*RELADA Trigger: AGCGTCTGCAAGTTCGCGCCACTCCGCGGGTACCGC...ATCATTAAGATGTTTTGTTTTAAACTGTGCTAGAAGACAGTGCAAACACAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTCTGCTGCCAGCTTGTTCTCATTTCATAACCACCTACAGTTGCCCCTATCAAGAGCCAAGTTTTaGCAGAAGTCTTCATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSAASLFSFHNHLQLPLSRAKF*QKSSSD Trigger: GTCTGATGAAGACTTCTGTCAAAACTTGGCTCTTGA...TAGGGGCAACTGTAGGTGGTTATGAAATGAGAACAAGCTGGCAGCAGAGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCTCTACCTTTGAAGACATTGTACATCCCAGGGAAATTATTTCATGATAAGCACCTTCATGTCCACTaGCGATGGGTCACCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLPLKTLYIPGKLFHDKHLHVH*RWVTLL Trigger: CAGCAGGGTGACCCATCGTCAGTGGACATGAAGGTG...CTTATCATGAAATAATTTCCCTGGGATGTACAATGTCTTCAAAGGTAGAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | TATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACGGCCACTCTTGGACTTaGGATCATAATTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YKQAPHCSPLRVASRVYNGHSWT*DHNFLL Trigger: AAGAAGGAAATTATGATCTCAAGTCCAAGAGTGGCC...GTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGTCTTTCCTGAGGAATTaGTGGCTGGACAGGATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCKGELVQKCFLLWKYILSFLRN*WLDRID Trigger: ATCAATCCTGTCCAGCCAGCAATTCCTCAGGAAAGA...CAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | AGACATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGGCCGCGATGGAATCCTaGGTGCGGATGATGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: RHCTSQGNYFMISQGLCLAAMES*VRMMVS Trigger: CGATACCATCATCCGCACCCAGGATTCCATCGCGGC...CAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | AGACATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGCAGCCTCAGGGTTCCTaGCTGAGGCACCTTCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHCTSQGNYFMISQGLCLQPQGS*LRHLHV Trigger: GACATGAAGGTGCCTCAGCCAGGAACCCTGAGGCTG...CAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGAACTCAGTGGAGAGAAGAGAGCCAGAAGATAAGAAAGCTGATAGGGGGGATTTTTCCAACTTaGGGTCTCCTTCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMRTQWREESQKIRKLIGGIFPT*GLLHLH Trigger: ATGAAGGTGAAGGAGACCCCAAGTTGGAAAAATCCC...CCCTATCAGCTTTCTTATCTTCTGGCTCTCTTCTCTCCACTGAGTTCTCATGAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGTCAAGGCTTGTGTTTGCACTGTCTTCTAGCACAGTTTAAAACAAAACATGCCTGGGAAGCACAGTaGCAGAGACGTTATCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISQGLCLHCLLAQFKTKHAWEAQ*QRRYRS Trigger: GCTCCGATAACGTCTCTGTCACTGTGCTTCCCAGGC...ATGTTTTGTTTTAAACTGTGCTAGAAGACAGTGCAAACACAAGCCTTGACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTAATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCTTCTTGGTTCTTTCCTaGGGAATTGCTGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILMIEPKEQIVSDSHPCPFLVLS*GIAVWL Trigger: CAGCCAGACAGCAATTCCTCAGGAAAGAACCAAGAA...GGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCATTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019931.12 |
||
| CDS-3UTR TCA 90 bp | TCCTGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGGGCCACTCTTGGACTTaGGATCATAATTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCKGELVQKCFLLWKYILGHSWT*DHNFLL Trigger: AAGAAGGAAATTATGATCTCAAGTCCAAGAGTGGCC...CAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | TCACATGCTGACTTTCTGTCTCAGCAAACAAGCTTCAGTCTTATGAATTCCTCTTTCTTGGTTCTTTCCTaGGGAATTGCTGTCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHADFLSQQTSFSLMNSSFLVLS*GIAVWP Trigger: CGGCCAGACAGCAATTCCTCAGGAAAGAACCAAGAA...AGAGGAATTCATAAGACTGAAGCTTGTTTGCTGAGACAGAAAGTCAGCATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | TGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGCACTGTATTGATCTGACTCTCTaGCGCCTTCTGGGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTSQGNYFMISQGLCLHCIDLTL*RLLGGV Trigger: CACTCCACCCAGAAGGCGCCAGAGAGTCAGATCAAT...ACAGTGCAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR TCA 90 bp | TTAATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCGAGGGCCACTCTTGGACTTaGGATCATAATTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LMIEPKEQIVSDSHPCPEGHSWT*DHNFLL Trigger: AAGAAGGAAATTATGATCTCAAGTCCAAGAGTGGCC...CTCGGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR GCA 90 bp | TGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGCACTGTGCTTTCTTGAGTTTCTaGTTCACCAGTCGGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CTSQGNYFMISQGLCLHCAFLSF*FTSRSR Trigger: CCGACTCCGACTGGTGAAGCAGAAACTCAAGAAAGC...ACAGTGCAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000135907.8 |
||
| CDS-3UTR CCA 90 bp | ACATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGCATGGGTAGTGGCTCTCTaGGATTTTTCCAACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLYIPGKLFHDKSRLVFAWVVAL*DFSNLG Trigger: CCCCAAGTTGGAAAAATCCCAGAGAGCCACTACCCA...TGCAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CCA 90 bp | AGACATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGGGGATTTTTCCAACTTaGGGTCTCCTTCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHCTSQGNYFMISQGLCLGIFPT*GLLHLH Trigger: ATGAAGGTGAAGGAGACCCCAAGTTGGAAAAATCCC...CAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| 3UTR CAA 72 bp | CAAACAAGCTTCAGTCTTATGAATTCCTCTCTACCTTaGAAGACATTGTACATCCCAGGGAAATTATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSFSLMNSSLP*KTLYIPGKLFH Trigger: ATGAAATAATTTCCCTGGGATGTACAATGTCTTCAAAGGTAGAGAGGAATTCATAAGACTGAAGCTTGTTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| 3UTR CAA 72 bp | CAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTaGCACTGTCTTCTAGCACAGTTTAAAACAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGNYFMISQGLC*HCLLAQFKTKH Trigger: ATGTTTTGTTTTAAACTGTGCTAGAAGACAGTGCAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| 3UTR CAA 72 bp | TTCAGTCTTATGAATTCCTCTCTACCTTTGAAGACATaGTACATCCCAGGGAAATTATTTCATGATAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLMNSSLPLKT*YIPGKLFHDKS Trigger: TGACTTATCATGAAATAATTTCCCTGGGATGTACAATGTCTTCAAAGGTAGAGAGGAATTCATAAGACTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS GCA 90 bp | GGGCATAGGTGCGGGCACGCTGGGCCCCCGGGGCAGCTGCACCACTaGCACCGAGCAGCTCGGCTCGGAGCAGCAGGCCGTCACGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GHRCGHAGPPGQLHH*HRAARLGAAGRHAL Trigger: CAGTGCGTGACGGCCTGCTGCTCCGAGCCGAGCTGCTCGGTGGCAGTGGTGCAGCTGCCCCGGGGGCCCAGCGTGCCCGCACCTATGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 ENSMUST00000135907.8 |
||
| CDS GCA 90 bp | ACTGCCACCGAGCAGCTCGGCTCGGAGCAGCAGGCCGTCACGCACTaGCGCCAACCCCGCACGCTCCCGGGTGCGCGCAGGAAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TATEQLGSEQQAVTH*RQPRTLPGARRKLA Trigger: AGCCAGCTTCCTGCGCGCACCCGGGAGCGTGCGGGGTTGGCGGCAGTGCGTGACGGCCTGCTGCTCCGAGCCGAGCTGCTCGGTGGCAGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 ENSMUST00000135907.8 |
||
| CDS TCA 90 bp | CGCGCAGGAAGCTGGCTCCCGCCGCGATGGAATCCTGGGTGCGGATaGTGGTATCGGGCACCGCCCGGTAGACCGCCGTACCGCCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAGSWLPPRWNPGCG*WYRAPPGRPPYRPH Trigger: GTGCGGGCGGTACGGCGGTCTACCGGGCGGTGCCCGATACCATCATCCGCACCCAGGATTCCATCGCGGCGGGAGCCAGCTTCCTGCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 ENSMUST00000135907.8 |
||
| CDS CCA 90 bp | GGCGTCCTCGGCGCGACTGAGGGTGTAAGTGCGGTACCCGCGGAGTaGCGCGAACTTGCAGACGCTGCGGCCGCGCGCCGTGCAGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVLGATEGVSAVPAE*RELADAAAARRAVE Trigger: TTCAACTGCACGGCGCGCGGCCGCAGCGTCTGCAAGTTCGCGCCACTCCGCGGGTACCGCACTTACACCCTCAGTCGCGCCGAGGACGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 ENSMUST00000135907.8 |
||
| CDS TCA 90 bp | CCTCATCTGGCCGGGGAGGGATCCCAGCGGCGTCCTCGGCGCGACTaGGGGTGTAAGTGCGGTACCCGCGGAGTGGCGCGAACTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PHLAGEGSQRRPRRD*GCKCGTRGVARTCR Trigger: TCTGCAAGTTCGCGCCACTCCGCGGGTACCGCACTTACACCCTCAGTCGCGCCGAGGACGCCGCTGGGATCCCTCCCCGGCCAGATGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
||
| CDS TCA 90 bp | TGCTGTCTGGCCGGGGAGGGATCCCAGCGGCGTCCTCGGCGCGACTaGGGGTGTAAGTGCGGTACCCGCGGAGTGGCGCGAACTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCLAGEGSQRRPRRD*GCKCGTRGVARTCR Trigger: TCTGCAAGTTCGCGCCACTCCGCGGGTACCGCACTTACACCCTCAGTCGCGCCGAGGACGCCGCTGGGATCCCTCCCCGGCCAGACAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135907.8 |
||
| CDS CCA 90 bp | AACCACATCCTTCCCAGCCTTGCTAACGGGAGGCTTGTCCTCATCTaGCCGGGGAGGGATCCCAGCGGCGTCCTCGGCGCGACTGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NHILPSLANGRLVLI*PGRDPSGVLGATEG Trigger: ACCCTCAGTCGCGCCGAGGACGCCGCTGGGATCCCTCCCCGGCCAGATGAGGACAAGCCTCCCGTTAGCAAGGCTGGGAAGGATGTGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
||
| CDS-3UTR CAA 90 bp | CCATTCCATGAAGCAGCATTGAGTAGATTGTCCTTACGAATCCCACGGCTGGGGCGGAGTGGCGCGAACTaGCAGACGCTGCGGCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PFHEAALSRLSLRIPRLGRSGAN*QTLRPR Trigger: GCGCGGCCGCAGCGTCTGCAAGTTCGCGCCACTCCG...CCCCAGCCGTGGGATTCGTAAGGACAATCTACTCAATGCTGCTTCATGGAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS TCA 90 bp | TGCGGTCAAGAGCCACTCCCGTGGAGTAGGGCCTGGGAAGCACAGTaGCAGAGACGTTATCGGAGCTTCTCTGACCCACGGAGTCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CGQEPLPWSRAWEAQ*QRRYRSFSDPRSQS Trigger: TGACTGACTCCGTGGGTCAGAGAAGCTCCGATAACGTCTCTGTCACTGTGCTTCCCAGGCCCTACTCCACGGGAGTGGCTCTTGACCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124961.2 |
||
| CDS-3UTR CAA 90 bp | TTAATGATAGAACCCAAAGAACAGATTGTGAGTGATAGCCATCCTTGCCCCGAGCGGAGTGGCGCGAACTaGCAGACGCTGCGGCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LMIEPKEQIVSDSHPCPERSGAN*QTLRPR Trigger: GCGCGGCCGCAGCGTCTGCAAGTTCGCGCCACTCCG...CTCGGGGCAAGGATGGCTATCACTCACAATCTGTTCTTTGGGTTCTATCATTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS TCA 90 bp | TGGTTCTTTCCTGAGGAATTGCTGTCTGGCTGGACAGGATTGATCTaGCTCTCTGGCGCCTTCTGGGTGGAGTGGATCCTCGTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WFFPEELLSGWTGLI*LSGAFWVEWILVSG Trigger: CCCAGAGACGAGGATCCACTCCACCCAGAAGGCGCCAGAGAGTCAGATCAATCCTGTCCAGCCAGACAGCAATTCCTCAGGAAAGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 |
||
| CDS TCA 90 bp | GGTTCCTGGCTGAGGCACCTGCCATACAAACAGCTTCATGTCCACTaGCGATGGGTCACCCTGCTGCAGCGTCCACTCATAAAGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSWLRHLPYKQLHVH*RWVTLLQRPLIKDN Trigger: ATTGTCCTTTATGAGTGGACGCTGCAGCAGGGTGACCCATCGTCAGTGGACATGAAGCTGTTTGTATGGCAGGTGCCTCAGCCAGGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134346.8 |
||
| CDS CCA 90 bp | GAGTGGATCCTCGTCTCTGGGTGGGATACAGTAGCGGGTTGGTTGTaGGTAGTGGCTCTCTGGGATTTTTCCAACTTGGGGTCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EWILVSGWDTVAGWL*VVALWDFSNLGSPS Trigger: TGAAGGAGACCCCAAGTTGGAAAAATCCCAGAGAGCCACTACCCACAACCAACCCGCTACTGTATCCCACCCAGAGACGAGGATCCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
||
| CDS TCA 90 bp | CTTCTTGGTTCTTTCCTGAGGAATTGCTGTCTGGCTGGACAGGATTaGTCTGACTCTCTGGCGCCTTCTGGGTGGAGTGGATCCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLGSFLRNCCLAGQD*SDSLAPSGWSGSSS Trigger: AGACGAGGATCCACTCCACCCAGAAGGCGCCAGAGAGTCAGATCAATCCTGTCCAGCCAGACAGCAATTCCTCAGGAAAGAACCAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 |
||
| CDS TCA 90 bp | CCTTCTTCTTGGTTCTTTCCTGAGGAATTGCTGGCTGGACAGGATTaGTCTGACTCTCTGGCGCCTTCTGGGTGGAGTGGATCCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSWFFPEELLAGQD*SDSLAPSGWSGSSS Trigger: AGACGAGGATCCACTCCACCCAGAAGGCGCCAGAGAGTCAGATCAATCCTGTCCAGCCAGCAATTCCTCAGGAAAGAACCAAGAAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
||
| CDS-3UTR CAA 90 bp | TATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACAACGTGCTCCCCTCCTGCTaGGCCACTCTTGGACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YKQAPHCSPLRVASRVYNVLPSC*ATLGLE Trigger: CTCAAGTCCAAGAGTGGCCAAGCAGGAGGGGAGCAC...GTTGTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS CCA 90 bp | AACTTGGGGTCTCCTTCACCTTCATTTAATCCCATGGCTCCTGGCTaGGCAGAAGTAGCCACTGTGTGTGTCACCAACTTGCGGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLGSPSPSFNPMAPG*AEVATVCVTNLRSR Trigger: TCTTGACCGCAAGTTGGTGACACACACAGTGGCTACTTCTGCCCAGCCAGGAGCCATGGGATTAAATGAAGGTGAAGGAGACCCCAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGGTGCTCCCCTCCTGCTaGGCCACTCTTGGACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCKGELVQKCFLLWKYILVLPSC*ATLGLE Trigger: CTCAAGTCCAAGAGTGGCCAAGCAGGAGGGGAGCAC...CAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS CCA 90 bp | TCTGGGTGGGATACAGTAGCGGGTTGGTTGTGGGTAGTGGCTCTCTaGGATTTTTCCAACTTGGGGTCTCCTTCACCTTCATTTAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGWDTVAGWLWVVAL*DFSNLGSPSPSFNP Trigger: GGGATTAAATGAAGGTGAAGGAGACCCCAAGTTGGAAAAATCCCAGAGAGCCACTACCCACAACCAACCCGCTACTGTATCCCACCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGTGTTTGCACTGTCTTCTAGCACAGTTTAAAACAAAACATCTTAATGATCGGAGTGGCGCGAACTaGCAGACGCTGCGGCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GLCLHCLLAQFKTKHLNDRSGAN*QTLRPR Trigger: GCGCGGCCGCAGCGTCTGCAAGTTCGCGCCACTCCG...ATCATTAAGATGTTTTGTTTTAAACTGTGCTAGAAGACAGTGCAAACACAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
||
| CDS-3UTR CAA 90 bp | GATTATAAACAGGCACCACACTGCAGTCCCCTCAGAGTAGCCTCTAGAGTATACTGGGATTTTTCCAACTaGGGGTCTCCTTCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DYKQAPHCSPLRVASRVYWDFSN*GSPSPS Trigger: TGAAGGTGAAGGAGACCCCAAGTTGGAAAAATCCCA...GTATACTCTAGAGGCTACTCTGAGGGGACTGCAGTGTGGTGCCTGTTTATAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGCAAAGGGGAACTTGTGCAAAAGTGCTTTCTGCTCTGGAAATACATCCTGTTCTTTCCTGAGGAATaGCTGTCTGGCTGGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SCKGELVQKCFLLWKYILFFPEE*LSGWTG Trigger: TCCTGTCCAGCCAGACAGCAATTCCTCAGGAAAGAA...CAGGATGTATTTCCAGAGCAGAAAGCACTTTTGCACAAGTTCCCCTTTGCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019931.12 |
||
| CDS-3UTR CAA 90 bp | CATTGTACATCCCAGGGAAATTATTTCATGATAAGTCAAGGCTTGTGTTTGCACGTGCTCCCCTCCTGCTaGGCCACTCTTGGACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HCTSQGNYFMISQGLCLHVLPSC*ATLGLE Trigger: CTCAAGTCCAAGAGTGGCCAAGCAGGAGGGGAGCAC...GTGCAAACACAAGCCTTGACTTATCATGAAATAATTTCCCTGGGATGTACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000135907.8 |
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| CDS-3UTR CAA 90 bp | GGCTTGTGTTTGCACTGTCTTCTAGCACAGTTTAAAACAAAACATCTTAATGATTTCTTTCCTGAGGAATaGCTGTCTGGCCGGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GLCLHCLLAQFKTKHLNDFFPEE*LSGRGG Trigger: CCCTCCCCGGCCAGACAGCAATTCCTCAGGAAAGAA...ATCATTAAGATGTTTTGTTTTAAACTGTGCTAGAAGACAGTGCAAACACAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135907.8 |
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| CDS-3UTR CAA 90 bp | TCCTCTCTACCTTTGAAGACATTGTACATCCCAGGGAAATTATTTCATGATAAGTGGGATTTTTCCAACTaGGGGTCTCCTTCACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SSLPLKTLYIPGKLFHDKWDFSN*GSPSPS Trigger: TGAAGGTGAAGGAGACCCCAAGTTGGAAAAATCCCA...CTTATCATGAAATAATTTCCCTGGGATGTACAATGTCTTCAAAGGTAGAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 |
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| CDS GCA 72 bp | GAGCAGCTCGGCTCGGAGCAGCAGGCCGTCACGCACTaGCGCCAACCCCGCACGCTCCCGGGTGCGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: EQLGSEQQAVTH*RQPRTLPGARR Trigger: CCTGCGCGCACCCGGGAGCGTGCGGGGTTGGCGGCAGTGCGTGACGGCCTGCTGCTCCGAGCCGAGCTGCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 ENSMUST00000135907.8 |
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| CDS GCA 72 bp | GGCATAGGTGCGGGCACGCTGGGCCCCCGGGGCAGCTaGACCACTGCCACCGAGCAGCTCGGCTCGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GIGAGTLGPRGS*TTATEQLGSEQ Trigger: CTGCTCCGAGCCGAGCTGCTCGGTGGCAGTGGTGCAGCTGCCCCGGGGGCCCAGCGTGCCCGCACCTATGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 ENSMUST00000135907.8 |
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| CDS CCA 72 bp | GGCGCGACTGAGGGTGTAAGTGCGGTACCCGCGGAGTaGCGCGAACTTGCAGACGCTGCGGCCGCGCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: GATEGVSAVPAE*RELADAAAARR Trigger: ACGGCGCGCGGCCGCAGCGTCTGCAAGTTCGCGCCACTCCGCGGGTACCGCACTTACACCCTCAGTCGCGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 ENSMUST00000135907.8 |
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| CDS CCA 72 bp | CTTCCCAGCCTTGCTAACGGGAGGCTTGTCCTCATCTaGCCGGGGAGGGATCCCAGCGGCGTCCTCGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: LPSLANGRLVLI*PGRDPSGVLGA Trigger: CGCGCCGAGGACGCCGCTGGGATCCCTCCCCGGCCAGATGAGGACAAGCCTCCCGTTAGCAAGGCTGGGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS GCA 72 bp | GCCAGAGGTAGCACCGCACCTGCTTCCGGGGCCGGGTaGTCCCCTCCTGCTTGGCCACTCTTGGACTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ARGSTAPASGAG*SPPAWPLLDLR Trigger: TCTCAAGTCCAAGAGTGGCCAAGCAGGAGGGGAGCACCCGGCCCCGGAAGCAGGTGCGGTGCTACCTCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000135907.8 |
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| CDS CAA 90 bp | GGCAGATGTAAAACCACATCCTTCCCAGCCTTGCTAACGGGAGGCTaGTCCTCATCTGGCCGGGGAGGGATCCCAGCGGCGTCCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: GRCKTTSFPALLTGG*SSSGRGGIPAASSA Trigger: CGCCGAGGACGCCGCTGGGATCCCTCCCCGGCCAGATGAGGACAAGCCTCCCGTTAGCAAGGCTGGGAAGGATGTGGTTTTACATCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CAA 72 bp | AAAACCACATCCTTCCCAGCCTTGCTAACGGGAGGCTaGTCCTCATCTGGCCGGGGAGGGATCCCAGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: KTTSFPALLTGG*SSSGRGGIPAA Trigger: CGCCGCTGGGATCCCTCCCCGGCCAGATGAGGACAAGCCTCCCGTTAGCAAGGCTGGGAAGGATGTGGTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS TCA 72 bp | GAGCCACTCCCGTGGAGTAGGGCCTGGGAAGCACAGTaGCAGAGACGTTATCGGAGCTTCTCTGACCCACGG | + |
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Preference number: 6 (lower is better) Translates to: EPLPWSRAWEAQ*QRRYRSFSDPR Trigger: CCGTGGGTCAGAGAAGCTCCGATAACGTCTCTGTCACTGTGCTTCCCAGGCCCTACTCCACGGGAGTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124961.2 |
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| CDS GCA 72 bp | CACCGCACCTGCTTCCGGGGCCGGGTGCTCCCCTCCTaGTTGGCCACTCTTGGACTTGAGATCATAATTTCC | + |
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Preference number: 6 (lower is better) Translates to: HRTCFRGRVLPS*LATLGLEIIIS Trigger: GGAAATTATGATCTCAAGTCCAAGAGTGGCCAAGCAGGAGGGGAGCACCCGGCCCCGGAAGCAGGTGCGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000135907.8 |
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| CDS TCA 72 bp | CCTCAGGGTTCCTGGCTGAGGCACCTTCATGTCCACTaGCGATGGGTCACCCTGCTGCAGCGTCCACTCATA | + |
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Preference number: 6 (lower is better) Translates to: PQGSWLRHLHVH*RWVTLLQRPLI Trigger: TATGAGTGGACGCTGCAGCAGGGTGACCCATCGTCAGTGGACATGAAGGTGCCTCAGCCAGGAACCCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 |
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| CDS CAA 72 bp | CGCACCTGCTTCCGGGGCCGGGTGCTCCCCTCCTGCTaGGCCACTCTTGGACTTGAGATCATAATTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RTCFRGRVLPSC*ATLGLEIIISF Trigger: GAAGGAAATTATGATCTCAAGTCCAAGAGTGGCCAAGCAGGAGGGGAGCACCCGGCCCCGGAAGCAGGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000135907.8 |
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| CDS CAA 72 bp | TCTGTGGGCAGATGTAAAACCACATCCTTCCCAGCCTaGCTAACGGGAGGCTTGTCCTCATCTGGCCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SVGRCKTTSFPA*LTGGLSSSGRG Trigger: TCCCCGGCCAGATGAGGACAAGCCTCCCGTTAGCAAGGCTGGGAAGGATGTGGTTTTACATCTGCCCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS TCA 72 bp | CTGAGGCACCTGCCATACAAACAGCTTCATGTCCACTaGCGATGGGTCACCCTGCTGCAGCGTCCACTCATA | + |
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Preference number: 6 (lower is better) Translates to: LRHLPYKQLHVH*RWVTLLQRPLI Trigger: TATGAGTGGACGCTGCAGCAGGGTGACCCATCGTCAGTGGACATGAAGCTGTTTGTATGGCAGGTGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134346.8 |
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| CDS CCA 72 bp | CTCGTCTCTGGGTGGGATACAGTAGCGGGTTGGTTGTaGGTAGTGGCTCTCTGGGATTTTTCCAACTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LVSGWDTVAGWL*VVALWDFSNLG Trigger: CCCCAAGTTGGAAAAATCCCAGAGAGCCACTACCCACAACCAACCCGCTACTGTATCCCACCCAGAGACGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS TCA 72 bp | TCTTTCCTGAGGAATTGCTGTCTGGCTGGACAGGATTaGTCTGACTCTCTGGCGCCTTCTGGGTGGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SFLRNCCLAGQD*SDSLAPSGWSG Trigger: TCCACTCCACCCAGAAGGCGCCAGAGAGTCAGATCAATCCTGTCCAGCCAGACAGCAATTCCTCAGGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000134346.8 |
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| CDS TCA 72 bp | TGGTTCTTTCCTGAGGAATTGCTGGCTGGACAGGATTaGTCTGACTCTCTGGCGCCTTCTGGGTGGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: WFFPEELLAGQD*SDSLAPSGWSG Trigger: TCCACTCCACCCAGAAGGCGCCAGAGAGTCAGATCAATCCTGTCCAGCCAGCAATTCCTCAGGAAAGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
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| CDS CCA 72 bp | CCGAGCTTTCTCGACCATCTAGAACTACCCCGTCTGTaGGCAGATGTAAAACCACATCCTTCCCAGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PSFLDHLELPRL*ADVKPHPSQPC Trigger: GCAAGGCTGGGAAGGATGTGGTTTTACATCTGCCCACAGACGGGGTAGTTCTAGATGGTCGAGAAAGCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CCA 72 bp | TGGATCCTCGTCTCTGGGTGGGATACAGTAGCGGGTTaGTTGTGGGTAGTGGCTCTCTGGGATTTTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: WILVSGWDTVAG*LWVVALWDFSN Trigger: GTTGGAAAAATCCCAGAGAGCCACTACCCACAACCAACCCGCTACTGTATCCCACCCAGAGACGAGGATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CAA 72 bp | GTGGATCCTCGTCTCTGGGTGGGATACAGTAGCGGGTaGGTTGTGGGTAGTGGCTCTCTGGGATTTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: VDPRLWVGYSSG*VVGSGSLGFFQ Trigger: TTGGAAAAATCCCAGAGAGCCACTACCCACAACCAACCCGCTACTGTATCCCACCCAGAGACGAGGATCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CAA 90 bp | GTAGCGGGTTGGTTGTGGGTAGTGGCTCTCTGGGATTTTTCCAACTaGGGGTCTCCTTCACCTTCATTTAATCCCATGGCTCCTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VAGWLWVVALWDFSN*GSPSPSFNPMAPGW Trigger: CCAGCCAGGAGCCATGGGATTAAATGAAGGTGAAGGAGACCCCAAGTTGGAAAAATCCCAGAGAGCCACTACCCACAACCAACCCGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS TCA 72 bp | GTGTGTGTCACCAACTTGCGGTCAAGAGCCAAGTTTTaGCAGAAGTCTTCATCAGACCCGTCGGGACACTGC | + |
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Preference number: 6 (lower is better) Translates to: VCVTNLRSRAKF*QKSSSDPSGHC Trigger: GCAGTGTCCCGACGGGTCTGATGAAGACTTCTGTCAAAACTTGGCTCTTGACCGCAAGTTGGTGACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CAA 72 bp | ATCCTCGTCTCTGGGTGGGATACAGTAGCGGGTTGGTaGTGGGTAGTGGCTCTCTGGGATTTTTCCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: ILVSGWDTVAGW*WVVALWDFSNL Trigger: CAAGTTGGAAAAATCCCAGAGAGCCACTACCCACAACCAACCCGCTACTGTATCCCACCCAGAGACGAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS TCA 72 bp | CCGGGTGCTCCCCTCCTGCTTGGCCACTCTTGGACTTaGGATCATAATTTCCTTCTTCTTGGTTCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PGAPLLLGHSWT*DHNFLLLGSFL Trigger: CAGGAAAGAACCAAGAAGAAGGAAATTATGATCTCAAGTCCAAGAGTGGCCAAGCAGGAGGGGAGCACCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000135907.8 |
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| CDS CCA 72 bp | TCTCCTTCACCTTCATTTAATCCCATGGCTCCTGGCTaGGCAGAAGTAGCCACTGTGTGTGTCACCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SPSPSFNPMAPG*AEVATVCVTNL Trigger: CAAGTTGGTGACACACACAGTGGCTACTTCTGCCCAGCCAGGAGCCATGGGATTAAATGAAGGTGAAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CCA 72 bp | GATACAGTAGCGGGTTGGTTGTGGGTAGTGGCTCTCTaGGATTTTTCCAACTTGGGGTCTCCTTCACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: DTVAGWLWVVAL*DFSNLGSPSPS Trigger: TGAAGGTGAAGGAGACCCCAAGTTGGAAAAATCCCAGAGAGCCACTACCCACAACCAACCCGCTACTGTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CAA 72 bp | TGTGTGTGTCACCAACTTGCGGTCAAGAGCCAAGTTTaGACAGAAGTCTTCATCAGACCCGTCGGGACACTG | + |
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Preference number: 6 (lower is better) Translates to: CVCHQLAVKSQV*TEVFIRPVGTL Trigger: CAGTGTCCCGACGGGTCTGATGAAGACTTCTGTCAAAACTTGGCTCTTGACCGCAAGTTGGTGACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019931.12 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CAA 72 bp | TGGTTGTGGGTAGTGGCTCTCTGGGATTTTTCCAACTaGGGGTCTCCTTCACCTTCATTTAATCCCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: WLWVVALWDFSN*GSPSPSFNPMA Trigger: AGCCATGGGATTAAATGAAGGTGAAGGAGACCCCAAGTTGGAAAAATCCCAGAGAGCCACTACCCACAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019931.12 ENSMUST00000124961.2 ENSMUST00000130590.8 ENSMUST00000134346.8 |
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| CDS CCA 72 bp | AATTTCCTTCTTCTTGGTTCTTTCCTGAGGAATTGCTaGCTGGACAGGATTGATCTGACTCTCTGGCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: NFLLLGSFLRNC*LDRIDLTLWRL Trigger: AAGGCGCCAGAGAGTCAGATCAATCCTGTCCAGCCAGCAATTCCTCAGGAAAGAACCAAGAAGAAGGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130590.8 |
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