Pregenerated sensors for LRMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030263Ensembl transcript IDs: ENSMUST00000032396.13, ENSMUST00000132948.2, ENSMUST00000135984.8, ENSMUST00000152571.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGTCTCTCCCGGGGCACTGCCCTTCCCTCCGTTTTCTGTGGTTCTaGGTTCCTCTCCTGCTTCCAGCTGGGATGCAGCCTTGGCCACGC | + |
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Preference number: 1 (lower is better) Translates to: PSLPGHCPSLRFLWF*VPLLLPAGMQPWPR Trigger: GCGTGGCCAAGGCTGCATCCCAGCTGGAAGCAGGAGAGGAACTCAGAACCACAGAAAACGGAGGGAAGGGCAGTGCCCCGGGAGAGACGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CCA 90 bp | CCCAGGCCAATGTGCTGCTTCTCCTCTCAGAAAGGCTGGGCTTCCTaGTCCCCTCCACTGCCTCTTCGCCTTGTGGTTCTGGGGCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: PRPMCCFSSQKGWAS*SPPLPLRLVVLGRL Trigger: GAGACGCCCCAGAACCACAAGGCGAAGAGGCAGTGGAGGGGACCAGGAAGCCCAGCCTTTCTGAGAGGAGAAGCAGCACATTGGCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR TCA 90 bp | GGCTCTTCTGAAGGACGCCTGCAGGTGAGTGACCCAGGAAGCCACTaGGCTGCAGATTGTGCCCCTGTCCCAGGCCAATGTGCTGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: GSSEGRLQVSDPGSH*AADCAPVPGQCAAS Trigger: AGAAGCAGCACATTGGCCTGGGACAGGGGCACAATCTGCAGCTCAGTGGCTTCCTGGGTCACTCACCTGCAGGCGTCCTTCAGAAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR TCA 90 bp | TCCCCCTCCTGTGTGGGCGCAGCCTCCACGGCTGTCTGGAAGAGCTaGCCTGTGAGGAAGCTCATCAGCGCTGCGATCAGTATGATGATG | + |
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Preference number: 1 (lower is better) Translates to: SPSCVGAASTAVWKS*PVRKLISAAISMMM Trigger: CATCATCATACTGATCGCAGCGCTGATGAGCTTCCTCACAGGTCAGCTCTTCCAGACAGCCGTGGAGGCTGCGCCCACACAGGAGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | CGCCCACACTCGTGTAGTCTCCATAAGCAGCAGGAGCTAGGCTGGTaGCTTGCATGGCAGAGGCGGCTCTTGCTTCCTCCTCCTTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: RPHSCSLHKQQELGW*LAWQRRLLLPPPSH Trigger: GTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCCATGCAAGGCACCAGCCTAGCTCCTGCTGCTTATGGAGACTACACGAGTGTGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | GGCACTGCCCTTCCCTCCGTTTTCTGTGGTTCTGAGTTCCTCTCCTaGTTCCAGCTGGGATGCAGCCTTGGCCACGCCCACACTCGTGTA | + |
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Preference number: 1 (lower is better) Translates to: GTALPSVFCGSEFLS*FQLGCSLGHAHTRV Trigger: TACACGAGTGTGGGCGTGGCCAAGGCTGCATCCCAGCTGGAAGCAGGAGAGGAACTCAGAACCACAGAAAACGGAGGGAAGGGCAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | AAGCCACTGAGCTGCAGATTGTGCCCCTGTCCCAGGCCAATGTGCTaGTTCTCCTCTCAGAAAGGCTGGGCTTCCTGGTCCCCTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: KPLSCRLCPCPRPMC*FSSQKGWASWSPPL Trigger: CAGTGGAGGGGACCAGGAAGCCCAGCCTTTCTGAGAGGAGAAGCAGCACATTGGCCTGGGACAGGGGCACAATCTGCAGCTCAGTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | AGCTCTGCGTGCTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTaGTGGATCATCACCTCCACCGCTCTACTCACCCGGCTTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: SSACSLAYIRFRFST*WIITSTALLTRLSW Trigger: CCAGGAAAGCCGGGTGAGTAGAGCGGTGGAGGTGATGATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | CATCAGCGCTGCGATCAGTATGATGATGAGCCCCGTGAGCCAGAGTaGTCTGTTGGCTCTTCTGAAGGACGCCTGCAGGTGAGTGACCCA | + |
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Preference number: 1 (lower is better) Translates to: HQRCDQYDDEPREPE*SVGSSEGRLQVSDP Trigger: TGGGTCACTCACCTGCAGGCGTCCTTCAGAAGAGCCAACAGAGCACTCTGGCTCACGGGGCTCATCATCATACTGATCGCAGCGCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CCA 90 bp | TCTGCGTGCTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTGCTaGATCATCACCTCCACCGCTCTACTCACCCGGCTTTCCTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: SACSLAYIRFRFSTC*IITSTALLTRLSWL Trigger: CAACCAGGAAAGCCGGGTGAGTAGAGCGGTGGAGGTGATGATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | CTGTCGTTCTGCAGCAGTGCTTGCTTCAGATCCTCCAGCTCTGCGTaGTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTGCTGGATC | + |
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Preference number: 1 (lower is better) Translates to: LSFCSSACFRSSSSA*SLAYIRFRFSTCWI Trigger: GATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGCTGGAGGATCTGAAGCAAGCACTGCTGCAGAACGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | CACGGCTGTCTGGAAGAGCTGACCTGTGAGGAAGCTCATCAGCGCTaGGATCAGTATGATGATGAGCCCCGTGAGCCAGAGTGCTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: HGCLEELTCEEAHQR*DQYDDEPREPECSV Trigger: AACAGAGCACTCTGGCTCACGGGGCTCATCATCATACTGATCGCAGCGCTGATGAGCTTCCTCACAGGTCAGCTCTTCCAGACAGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CCA 90 bp | TCGTGTAGTCTCCATAAGCAGCAGGAGCTAGGCTGGTGCCTTGCATaGCAGAGGCGGCTCTTGCTTCCTCCTCCTTCTCACAGAGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: SCSLHKQQELGWCLA*QRRLLLPPPSHREV Trigger: AACCTCTCTGTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCCATGCAAGGCACCAGCCTAGCTCCTGCTGCTTATGGAGACTACACGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | TCATCTGGCAGAGAGTTAAAAGACCTGTCGTTCTGCAGCAGTGCTTaGTTCAGATCCTCCAGCTCTGCGTGCTCTTTGGCGTACATCCGC | + |
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Preference number: 1 (lower is better) Translates to: SSGRELKDLSFCSSA*FRSSSSACSLAYIR Trigger: GCGGATGTACGCCAAAGAGCACGCAGAGCTGGAGGATCTGAAGCAAGCACTGCTGCAGAACGACAGGTCTTTTAACTCTCTGCCAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | GGGTACATTGAGCTGCACGTCAGTCACACTGGCAGTGGTCCATCATaGCCGAGTCTGGTAAATGGCCATAAGATGTGTTCTAGAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: GYIELHVSHTGSGPS*PSLVNGHKMCSRDS Trigger: GCTGTCTCTAGAACACATCTTATGGCCATTTACCAGACTCGGGCATGATGGACCACTGCCAGTGTGACTGACGTGCAGCTCAATGTACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 90 bp | ATCTTCATCTGGCAGAGAGTTAAAAGACCTGTCGTTCTGCAGCAGTaGTTGCTTCAGATCCTCCAGCTCTGCGTGCTCTTTGGCGTACAT | + |
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Preference number: 1 (lower is better) Translates to: IFIWQRVKRPVVLQQ*LLQILQLCVLFGVH Trigger: ATGTACGCCAAAGAGCACGCAGAGCTGGAGGATCTGAAGCAAGCACTGCTGCAGAACGACAGGTCTTTTAACTCTCTGCCAGATGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR TCA 90 bp | TGGCTGAGCAGTACTATACTCTTCTCCAGCTTCTTAACGATTTCCTaGGCCTGGTTGTCCTCTTCACACAGGGGAGTCAGCGACTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: WLSSTILFSSFLTIS*AWLSSSHRGVSDSK Trigger: TTTAGAGTCGCTGACTCCCCTGTGTGAAGAGGACAACCAGGCTCAGGAAATCGTTAAGAAGCTGGAGAAGAGTATAGTACTGCTCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTGCGTGCTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTGCTGGATCCCAGCATCTCAGCCCTaGTGGCCACTCGGGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SSACSLAYIRFRFSTCWIPASQP*WPLGLC Trigger: GCACAGCCCGAGTGGCCAGCAGGGCTGAGATGCTGG...GATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTGCGTGCTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTGCTGGATCGCATCTCAGCCCTGCTaGCCACTCGGGCTGTGCACT | + |
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Preference number: 2 (lower is better) Translates to: SSACSLAYIRFRFSTCWIASQPC*PLGLCT Trigger: AGTGCACAGCCCGAGTGGCCAGCAGGGCTGAGATGC...GATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCACGTCAGTCACACTGGCAGTGGTCCATCATGCCCGAGTCTGGTAAATGGCGACCCAGGAAGCCACTaGGCTGCAGATTGTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LHVSHTGSGPSCPSLVNGDPGSH*AADCAP Trigger: AGGGGCACAATCTGCAGCTCAGTGGCTTCCTGGGTC...GCCATTTACCAGACTCGGGCATGATGGACCACTGCCAGTGTGACTGACGTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGTCCTCAGCGTCGGCCCAGGAATAGGTGCTGATGAAGCGATGCAGCGAGGGCTTCAAATTTTCCTCTaGCAGGTCCCGGGACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LVLSVGPGIGADEAMQRGLQIFL*QVPGPL Trigger: GAGAGGTCCCGGGACCTGGCAGAGGAAAATTTGAAG...CCCTCGCTGCATCGCTTCATCAGCACCTATTCCTGGGCCGACGCTGAGGACGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR GCA 90 bp | GCGTGCTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTGCTGGATCATCACCGGCAGAGGCGGCTCTTaGTTCCTCCTCCTTCTCACA | + |
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Preference number: 2 (lower is better) Translates to: ACSLAYIRFRFSTCWIITGRGGS*FLLLLT Trigger: TGTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCC...GGTGATGATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGCTTTCACGTCACTTCTCTCGTCCTCAGCGTCGGCCCAGGAATAGGTGCGCTCTGCGTGCTCTTTaGCGTACATCCGCTTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LWLSRHFSRPQRRPRNRCALRAL*RTSASG Trigger: ACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGC...GCACCTATTCCTGGGCCGACGCTGAGGACGAGAGAAGTGACGTGAAAGCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCACGTCAGTCACACTGGCAGTGGTCCATCATGCCCGAGTCTGGTAAATGGCAAAGGCTGGGCTTCCTaGTCCCCTCCACTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LHVSHTGSGPSCPSLVNGKGWAS*SPPLPL Trigger: AAGAGGCAGTGGAGGGGACCAGGAAGCCCAGCCTTT...GCCATTTACCAGACTCGGGCATGATGGACCACTGCCAGTGTGACTGACGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR GCA 90 bp | CGATTTCCTGAGCCTGGTTGTCCTCTTCACACAGGGGAGTCAGCGACTCTAAAACAGGAGCTAGGCTGGTaGCTTGCATGGCAGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: RFPEPGCPLHTGESATLKQELGW*LAWQRR Trigger: CCGCCTCTGCCATGCAAGGCACCAGCCTAGCTCCTG...TTTTAGAGTCGCTGACTCCCCTGTGTGAAGAGGACAACCAGGCTCAGGAAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCTGCGTGCTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTGCTGGATTCTGAGTTCCTCTCCTaGTTCCAGCTGGGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QLCVLFGVHPLQVLHVLDSEFLS*FQLGCS Trigger: GCTGCATCCCAGCTGGAAGCAGGAGAGGAACTCAGA...ATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTCCTGGTCCCCTCCACTGCCTCTTCGCCTTGTGGTTCTGGGGCGTCTCTTTCTCGTCTGTACTCTaGTCCTCGTTCATTCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: GLPGPLHCLFALWFWGVSFSSVL*SSFILV Trigger: TACCAGAATGAACGAGGACCAGAGTACAGACGAGAA...AGAGACGCCCCAGAACCACAAGGCGAAGAGGCAGTGGAGGGGACCAGGAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CAA 90 bp | TTCTGCAGCAGTGCTTGCTTCAGATCCTCCAGCTCTGCGTGCTCTTaGGCGTACATCCGCTTCAGGTTCTCCACGTGCTGGATCATCACC | + |
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Preference number: 2 (lower is better) Translates to: FCSSACFRSSSSACS*AYIRFRFSTCWIIT Trigger: GGTGATGATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGCTGGAGGATCTGAAGCAAGCACTGCTGCAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGCTTTCACGTCACTTCTCTCGTCCTCAGCGTCGGCCCAGGAATAGGTGCCGTTTTCTGTGGTTCTaGGTTCCTCTCCTGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LWLSRHFSRPQRRPRNRCRFLWF*VPLLLP Trigger: TGGAAGCAGGAGAGGAACTCAGAACCACAGAAAACG...GCACCTATTCCTGGGCCGACGCTGAGGACGAGAGAAGTGACGTGAAAGCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CCA 90 bp | GCGTGCTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTGCTGGATCATCACCAGTCTGTTCAGACGATaGCTGTGTGAGATACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: ACSLAYIRFRFSTCWIITSLFRR*LCEILP Trigger: AGGGAGTATCTCACACAGCCATCGTCTGAACAGACT...GGTGATGATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CAA 90 bp | ATGGCAGAGGCGGCTCTTGCTTCCTCCTCCTTCTCACAGAGAGGTTaGCAGTCAAGGTCACCAGAAGCCATGTGCAAAATGTCTGATCCA | + |
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Preference number: 2 (lower is better) Translates to: MAEAALASSSFSQRG*QSRSPEAMCKMSDP Trigger: TGGATCAGACATTTTGCACATGGCTTCTGGTGACCTTGACTGCAAACCTCTCTGTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CAA 90 bp | TTCATCTGGCAGAGAGTTAAAAGACCTGTCGTTCTGCAGCAGTGCTaGCTTCAGATCCTCCAGCTCTGCGTGCTCTTTGGCGTACATCCG | + |
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Preference number: 2 (lower is better) Translates to: FIWQRVKRPVVLQQC*LQILQLCVLFGVHP Trigger: CGGATGTACGCCAAAGAGCACGCAGAGCTGGAGGATCTGAAGCAAGCACTGCTGCAGAACGACAGGTCTTTTAACTCTCTGCCAGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGCTTTCACGTCACTTCTCTCGTCCTCAGCGTCGGCCCAGGAATAGGTGCGAACGCTTTTTAATCTaGCAGTCATCTTCATCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LWLSRHFSRPQRRPRNRCERFLI*QSSSSG Trigger: GCCAGATGAAGATGACTGTCAGATTAAAAAGCGTTC...GCACCTATTCCTGGGCCGACGCTGAGGACGAGAGAAGTGACGTGAAAGCCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTCTCCTGCTTCCAGCTaGGATGCAGCCTTGGCCACG | + |
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Preference number: 2 (lower is better) Translates to: CWGIKRSQLLRTLALHYSSPASS*DAALAT Trigger: CGTGGCCAAGGCTGCATCCCAGCTGGAAGCAGGAGA...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CAA 90 bp | CAAGGTCACCAGAAGCCATGTGCAAAATGTCTGATCCAGACTCACTaGACGTCACAGTGCTCTCCGAGGATGAAGTCTGTTCAGACGATG | + |
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Preference number: 2 (lower is better) Translates to: QGHQKPCAKCLIQTH*TSQCSPRMKSVQTM Trigger: CATCGTCTGAACAGACTTCATCCTCGGAGAGCACTGTGACGTCAAGTGAGTCTGGATCAGACATTTTGCACATGGCTTCTGGTGACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCTGACCTGTGAGGAAGCTCATCAGCGCTGCGATCAGTATGATGATGAGTGGGCAAAGAGGCAATaGTCACTCTTCGAAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: EELTCEEAHQRCDQYDDEWAKRQ*SLFEEK Trigger: CTTCTCTTCGAAGAGTGACCATTGCCTCTTTGCCCA...CTCATCATCATACTGATCGCAGCGCTGATGAGCTTCCTCACAGGTCAGCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTATTATTTTCCATGCCTaGCACCAGCCCCACATTTCC | + |
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Preference number: 2 (lower is better) Translates to: CWGIKRSQLLRTLALHYSIIFHA*HQPHIS Trigger: GGAAATGTGGGGCTGGTGTCAGGCATGGAAAATAAT...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCACGTCAGTCACACTGGCAGTGGTCCATCATGCCCGAGTCTGGTAAATGGCAGCTGGGATGCAGCCTaGGCCACGCCCACACTCGTG | + |
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Preference number: 3 (lower is better) Translates to: LHVSHTGSGPSCPSLVNGSWDAA*ATPTLV Trigger: CACGAGTGTGGGCGTGGCCAAGGCTGCATCCCAGCT...GCCATTTACCAGACTCGGGCATGATGGACCACTGCCAGTGTGACTGACGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR TCA 72 bp | GAAGGACGCCTGCAGGTGAGTGACCCAGGAAGCCACTaGGCTGCAGATTGTGCCCCTGTCCCAGGCCAATGT | + |
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Preference number: 3 (lower is better) Translates to: EGRLQVSDPGSH*AADCAPVPGQC Trigger: ACATTGGCCTGGGACAGGGGCACAATCTGCAGCTCAGTGGCTTCCTGGGTCACTCACCTGCAGGCGTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CCA 72 bp | GGGCTTCCTGGTCCCCTCCACTGCCTCTTCGCCTTGTaGTTCTGGGGCGTCTCTGGCTTTCACGTCACTTCT | + |
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Preference number: 3 (lower is better) Translates to: GLPGPLHCLFAL*FWGVSGFHVTS Trigger: AGAAGTGACGTGAAAGCCAGAGACGCCCCAGAACCACAAGGCGAAGAGGCAGTGGAGGGGACCAGGAAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CCA 72 bp | CCCAGGCCAATGTGCTGCTTCTCCTCTCAGAAAGGCTaGGCTTCCTGGTCCCCTCCACTGCCTCTTCGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PRPMCCFSSQKG*ASWSPPLPLRL Trigger: AAGGCGAAGAGGCAGTGGAGGGGACCAGGAAGCCCAGCCTTTCTGAGAGGAGAAGCAGCACATTGGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 72 bp | CTTCCCTCCGTTTTCTGTGGTTCTGAGTTCCTCTCCTaGTTCCAGCTGGGATGCAGCCTTGGCCACGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LPSVFCGSEFLS*FQLGCSLGHAH Trigger: GTGGGCGTGGCCAAGGCTGCATCCCAGCTGGAAGCAGGAGAGGAACTCAGAACCACAGAAAACGGAGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 72 bp | AGCTGCAGATTGTGCCCCTGTCCCAGGCCAATGTGCTaGTTCTCCTCTCAGAAAGGCTGGGCTTCCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: SCRLCPCPRPMC*FSSQKGWASWS Trigger: GGACCAGGAAGCCCAGCCTTTCTGAGAGGAGAAGCAGCACATTGGCCTGGGACAGGGGCACAATCTGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 72 bp | CTGAGCTGCAGATTGTGCCCCTGTCCCAGGCCAATGTaGTGCTTCTCCTCTCAGAAAGGCTGGGCTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LSCRLCPCPRPM*CFSSQKGWASW Trigger: CCAGGAAGCCCAGCCTTTCTGAGAGGAGAAGCAGCACATTGGCCTGGGACAGGGGCACAATCTGCAGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CCA 72 bp | CTCCATAAGCAGCAGGAGCTAGGCTGGTGCCTTGCATaGCAGAGGCGGCTCTTGCTTCCTCCTCCTTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LHKQQELGWCLA*QRRLLLPPPSH Trigger: GTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCCATGCAAGGCACCAGCCTAGCTCCTGCTGCTTATGGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGCTTTCACGTCACTTCTCTCGTCCTCAGCGTCGGCCCAGGAATAGGTGCCTGATCCAGACTCACTaGACGTCACAGTGCTCTCCG | + |
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Preference number: 3 (lower is better) Translates to: LWLSRHFSRPQRRPRNRCLIQTH*TSQCSP Trigger: CGGAGAGCACTGTGACGTCAAGTGAGTCTGGATCAG...GCACCTATTCCTGGGCCGACGCTGAGGACGAGAGAAGTGACGTGAAAGCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR GCA 72 bp | TGCTCTTTGGCGTACATCCGCTTCAGGTTCTCCACGTaGTGGATCATCACCTCCACCGCTCTACTCACCCGG | + |
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Preference number: 3 (lower is better) Translates to: CSLAYIRFRFST*WIITSTALLTR Trigger: CCGGGTGAGTAGAGCGGTGGAGGTGATGATCCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| 3UTR CCA 72 bp | CACTCGTGTAGTCTCCATAAGCAGCAGGAGCTAGGCTaGTGCCTTGCATGGCAGAGGCGGCTCTTGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSCSLHKQQELG*CLAWQRRLLLP Trigger: AGGAAGCAAGAGCCGCCTCTGCCATGCAAGGCACCAGCCTAGCTCCTGCTGCTTATGGAGACTACACGAGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR GCA 72 bp | TGCAGCAGTGCTTGCTTCAGATCCTCCAGCTCTGCGTaGTCTTTGGCGTACATCCGCTTCAGGTTCTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: CSSACFRSSSSA*SLAYIRFRFST Trigger: CGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGCTGGAGGATCTGAAGCAAGCACTGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR GCA 72 bp | TGCGATCAGTATGATGATGAGCCCCGTGAGCCAGAGTaGTCTGTTGGCTCTTCTGAAGGACGCCTGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CDQYDDEPREPE*SVGSSEGRLQV Trigger: CACCTGCAGGCGTCCTTCAGAAGAGCCAACAGAGCACTCTGGCTCACGGGGCTCATCATCATACTGATCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR GCA 72 bp | CTGGAAGAGCTGACCTGTGAGGAAGCTCATCAGCGCTaGGATCAGTATGATGATGAGCCCCGTGAGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LEELTCEEAHQR*DQYDDEPREPE Trigger: CTCTGGCTCACGGGGCTCATCATCATACTGATCGCAGCGCTGATGAGCTTCCTCACAGGTCAGCTCTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR TCA 72 bp | TTGTCCCCAGGATTCTCCAGCTGCTCGACCGCCGGCTaGATCTGTCATTATTTTCCATGCCTGACACCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSPGFSSCSTAG*ICHYFPCLTPA Trigger: GGCTGGTGTCAGGCATGGAAAATAATGACAGATTCAGCCGGCGGTCGAGCAGCTGGAGAATCCTGGGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTGCACTGGCTGAGCAGTACTATACTCTTCTCCAGCTTCTTAACGATTTCCTGGCAGAGGCGGCTCTaGCTTCCTCCTCCTTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AVHWLSSTILFSSFLTISWQRRL*LPPPSH Trigger: GTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCCA...GGAAATCGTTAAGAAGCTGGAGAAGAGTATAGTACTGCTCAGCCAGTGCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR GCA 72 bp | GAGCTGCACGTCAGTCACACTGGCAGTGGTCCATCATaGCCGAGTCTGGTAAATGGCCATAAGATGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELHVSHTGSGPS*PSLVNGHKMCS Trigger: AGAACACATCTTATGGCCATTTACCAGACTCGGGCATGATGGACCACTGCCAGTGTGACTGACGTGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR GCA 72 bp | TGGCAGAGAGTTAAAAGACCTGTCGTTCTGCAGCAGTaGTTGCTTCAGATCCTCCAGCTCTGCGTGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: WQRVKRPVVLQQ*LLQILQLCVLF Trigger: AAAGAGCACGCAGAGCTGGAGGATCTGAAGCAAGCACTGCTGCAGAACGACAGGTCTTTTAACTCTCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR GCA 72 bp | CAGAGAGGTTTGCAGTCAAGGTCACCAGAAGCCATGTaGAAAATGTCTGATCCAGACTCACTTGACGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QRGLQSRSPEAM*KMSDPDSLDVT Trigger: TGTGACGTCAAGTGAGTCTGGATCAGACATTTTGCACATGGCTTCTGGTGACCTTGACTGCAAACCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGCTGACCTGTGAGGAAGCTCATCAGCGCTGCGATCAGTATGATGATGAGCGAAGAGAAGATGGCTaGGAATTTAGAGAAGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: EELTCEEAHQRCDQYDDERREDG*EFREDE Trigger: TTCATCTTCTCTAAATTCCAAGCCATCTTCTCTTCG...CTCATCATCATACTGATCGCAGCGCTGATGAGCTTCCTCACAGGTCAGCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR CCA 72 bp | GCCCCACATTTCCAAGATTCCTGGGCAAAGAGGCAATaGTCACTCTTCGAAGAGAAGATGGCTTGGAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: APHFQDSWAKRQ*SLFEEKMAWNL Trigger: TAAATTCCAAGCCATCTTCTCTTCGAAGAGTGACCATTGCCTCTTTGCCCAGGAATCTTGGAAATGTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR TCA 72 bp | CCTGAGGAACTCTGCCTCCACTTCCTTCTCATTAGCTaGAGTGTTTTCACTCTGCTGAAAGTTAACGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PEELCLHFLLIS*SVFTLLKVNEL Trigger: AAGCTCGTTAACTTTCAGCAGAGTGAAAACACTTCAGCTAATGAGAAGGAAGTGGAGGCAGAGTTCCTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR TCA 72 bp | GGCTTGGAATTTAGAGAAGATGAACGCTTTTTAATCTaGCAGTCATCTTCATCTGGCAGAGAGTTAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GLEFREDERFLI*QSSSSGRELKD Trigger: GTCTTTTAACTCTCTGCCAGATGAAGATGACTGTCAGATTAAAAAGCGTTCATCTTCTCTAAATTCCAAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| 3UTR CAA 72 bp | AGTGCTTGCTTCAGATCCTCCAGCTCTGCGTGCTCTTaGGCGTACATCCGCTTCAGGTTCTCCACGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SACFRSSSSACS*AYIRFRFSTCW Trigger: CCAGCACGTGGAGAACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGCTGGAGGATCTGAAGCAAGCACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCCCAGCATCTCAGCCCTaGTGGCCACTCGGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPPASQP*WPLGLC Trigger: GCACAGCCCGAGTGGCCAGCAGGGCTGAGATGCTGG...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCACGCCTGCAGGTGAGTaGCCCAGGAAGCCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPTPAGE*PRKPLS Trigger: GCTCAGTGGCTTCCTGGGTCACTCACCTGCAGGCGT...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCGTGGGGAGTGGGCACTaGCACCCTCTTGTCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPVGSGH*HPLVTS Trigger: GGACGTGACAAGAGGGTGCCAGTGCCCACTCCCCAC...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032396.13 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCGACCCAGGAAGCCACTaGGCTGCAGATTGTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPDPGSH*AADCAP Trigger: AGGGGCACAATCTGCAGCTCAGTGGCTTCCTGGGTC...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTCAGGAGCTAGGCTGGTaGCTTGCATGGCAGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSQELGW*LAWQRR Trigger: CCGCCTCTGCCATGCAAGGCACCAGCCTAGCTCCTG...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACTGCTTCCAGCTGGGATaGAGCCTTGGCCACGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYCFQLG*SLGHAH Trigger: GTGGGCGTGGCCAAGGCTGCATCCCAGCTGGAAGCA...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCGGGCGGTGCTCACCCTaGTTTGTCCCCAGGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPGRCSP*FVPRIL Trigger: GAGAATCCTGGGGACAAAGCAGGGTGAGCACCGCCC...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACAGATGGAGCCTTCCGTaGGGAGTGGGCACTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYRWSLP*GVGTGT Trigger: GGTGCCAGTGCCCACTCCCCACGGAAGGCTCCATCT...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032396.13 |
||
| CDS-3UTR CCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACGCATCTCAGCCCTGCTaGCCACTCGGGCTGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYASQPC*PLGLCT Trigger: AGTGCACAGCCCGAGTGGCCAGCAGGGCTGAGATGC...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTGCATCTCAGCCCTGCTaGCCACTCGGGCTGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSASQPC*PLGLCT Trigger: AGTGCACAGCCCGAGTGGCCAGCAGGGCTGAGATGC...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCGGAAGAGCTGACCTGTaGGGAAGCTCATCAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPGRADL*GSSSAL Trigger: CAGCGCTGATGAGCTTCCTCACAGGTCAGCTCTTCC...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCCTGAGCTGCAGATTGTaGCCCTGTCCCAGGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPLSCRL*PCPRPM Trigger: CATTGGCCTGGGACAGGGGCACAATCTGCAGCTCAG...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACTCTCCTGCTTCCAGCTaGGATGCAGCCTTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYSPASS*DAALAT Trigger: CGTGGCCAAGGCTGCATCCCAGCTGGAAGCAGGAGA...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACGGAAGAGCTGACCTGTaGGGAAGCTCATCAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYGRADL*GSSSAL Trigger: CAGCGCTGATGAGCTTCCTCACAGGTCAGCTCTTCC...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCTGACCTGTGAGGAAGCTCATCAGCGCTGCGATCAGTATGATGATGAGCCATCTTCTGGTTCCTaGTCTGGGGGACCTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: EELTCEEAHQRCDQYDDEPSSGS*SGGPFT Trigger: TGTAAAAGGTCCCCCAGAGCAGGAACCAGAAGATGG...CTCATCATCATACTGATCGCAGCGCTGATGAGCTTCCTCACAGGTCAGCTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACGGCAGAGGCGGCTCTTaGTTCCTCCTCCTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYGRGGS*FLLLLT Trigger: TGTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCC...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTTGCTTCCAGCTGGGATaGAGCCTTGGCCACGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGCFQLG*SLGHAH Trigger: GTGGGCGTGGCCAAGGCTGCATCCCAGCTGGAAGCA...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGCCAGCATCTCAGCCCTaGTGGCCACTCGGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWPASQP*WPLGLC Trigger: GCACAGCCCGAGTGGCCAGCAGGGCTGAGATGCTGG...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACAAAGGCTGGGCTTCCTaGTCCCCTCCACTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYKGWAS*SPPLPL Trigger: AAGAGGCAGTGGAGGGGACCAGGAAGCCCAGCCTTT...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTAAAGGCTGGGCTTCCTaGTCCCCTCCACTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSKGWAS*SPPLPL Trigger: AAGAGGCAGTGGAGGGGACCAGGAAGCCCAGCCTTT...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACTCCTCTCAGAAAGGCTaGGCTTCCTGGTCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYSSQKG*ASWSPP Trigger: TGGAGGGGACCAGGAAGCCCAGCCTTTCTGAGAGGA...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTGACCCAGGAAGCCACTaGGCTGCAGATTGTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGDPGSH*AADCAP Trigger: AGGGGCACAATCTGCAGCTCAGTGGCTTCCTGGGTC...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGACGCCTGCAGGTGAGTaGCCCAGGAAGCCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWTPAGE*PRKPLS Trigger: GCTCAGTGGCTTCCTGGGTCACTCACCTGCAGGCGT...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTGGGCGGTGCTCACCCTaGTTTGTCCCCAGGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGGRCSP*FVPRIL Trigger: GAGAATCCTGGGGACAAAGCAGGGTGAGCACCGCCC...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTCCCCGTGAGCCAGAGTaGTCTGTTGGCTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSPREPE*SVGSSE Trigger: TTCAGAAGAGCCAACAGAGCACTCTGGCTCACGGGG...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGCCTTCCGTGGGGAGTaGGCACTGGCACCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWAFRGE*ALAPSC Trigger: ACAAGAGGGTGCCAGTGCCCACTCCCCACGGAAGGC...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032396.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTGCCTTCCGTGGGGAGTaGGCACCAAGCAGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGAFRGE*APSRKR Trigger: TCTCTTCCTGCTTGGTGCCCACTCCCCACGGAAGGC...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCCGTTTTCTGTGGTTCTaGGTTCCTCTCCTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPRFLWF*VPLLLP Trigger: TGGAAGCAGGAGAGGAACTCAGAACCACAGAAAACG...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGTCTCCTGCTTCCAGCTaGGATGCAGCCTTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWSPASS*DAALAT Trigger: CGTGGCCAAGGCTGCATCCCAGCTGGAAGCAGGAGA...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| 3UTR CAA 72 bp | CAGAAGCCATGTGCAAAATGTCTGATCCAGACTCACTaGACGTCACAGTGCTCTCCGAGGATGAAGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKPCAKCLIQTH*TSQCSPRMKSV Trigger: AACAGACTTCATCCTCGGAGAGCACTGTGACGTCAAGTGAGTCTGGATCAGACATTTTGCACATGGCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACCGTTTTCTGTGGTTCTaGGTTCCTCTCCTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYRFLWF*VPLLLP Trigger: TGGAAGCAGGAGAGGAACTCAGAACCACAGAAAACG...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTGTCCCAAAGATAACCTaGGGAACTCTGCCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSVPKIT*GTLPPL Trigger: AAGTGGAGGCAGAGTTCCTCAGGTTATCTTTGGGAC...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTTCTGAGTTCCTCTCCTaGTTCCAGCTGGGATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGSEFLS*FQLGCS Trigger: GCTGCATCCCAGCTGGAAGCAGGAGAGGAACTCAGA...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCCGTGAGCCAGAGTaGTCTGTTGGCTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGPREPE*SVGSSE Trigger: TTCAGAAGAGCCAACAGAGCACTCTGGCTCACGGGG...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTGCTCTGCGTGCTCTTTaGCGTACATCCGCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGALRAL*RTSASG Trigger: ACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGC...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGTCCTCTCAGAAAGGCTaGGCTTCCTGGTCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWSSQKG*ASWSPP Trigger: TGGAGGGGACCAGGAAGCCCAGCCTTTCTGAGAGGA...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCCTCTCGGAATACAAGTaGTCAGCACCATTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPLSEYK*SAPFSA Trigger: TGCAGAGAATGGTGCTGACCACTTGTATTCCGAGAG...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGTCTGAGTTCCTCTCCTaGTTCCAGCTGGGATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWSEFLS*FQLGCS Trigger: GCTGCATCCCAGCTGGAAGCAGGAGAGGAACTCAGA...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCTTCAAATTTTCCTCTaGCAGGTCCCGGGACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGLQIFL*QVPGPL Trigger: GAGAGGTCCCGGGACCTGGCAGAGGAAAATTTGAAG...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTGTCGTTCTGCAGCAGTaGTTGCTTCAGATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGVVLQQ*LLQILQ Trigger: CTGGAGGATCTGAAGCAAGCACTGCTGCAGAACGAC...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACAAAGACCTGTCGTTCTaGAGCAGTGCTTGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYKDLSF*SSACFR Trigger: TCTGAAGCAAGCACTGCTGCAGAACGACAGGTCTTT...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGCTCTGCGTGCTCTTTaGCGTACATCCGCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWALRAL*RTSASG Trigger: ACCTGAAGCGGATGTACGCCAAAGAGCACGCAGAGC...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTGGGCAAAGAGGCAATaGTCACTCTTCGAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSWAKRQ*SLFEEK Trigger: CTTCTCTTCGAAGAGTGACCATTGCCTCTTTGCCCA...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCCATTTCCAAGATTCCTaGGCAAAGAGGCAATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPHFQDS*AKRQWS Trigger: TGACCATTGCCTCTTTGCCCAGGAATCTTGGAAATG...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTTCTTAACGATTTCCTaGGCCTGGTTGTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSFLTIS*AWLSSS Trigger: TGAAGAGGACAACCAGGCTCAGGAAATCGTTAAGAA...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCGAACGCTTTTTAATCTaGCAGTCATCTTCATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSDASHSESSLKYPRWGPERFLI*QSSSSG Trigger: GCCAGATGAAGATGACTGTCAGATTAAAAAGCGTTC...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTCACCAGAAGCCATGTaGAAAATGTCTGATCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSSPEAM*KMSDPD Trigger: GTCTGGATCAGACATTTTGCACATGGCTTCTGGTGA...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGCTTCAAATTTTCCTCTaGCAGGTCCCGGGACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWLQIFL*QVPGPL Trigger: GAGAGGTCCCGGGACCTGGCAGAGGAAAATTTGAAG...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGTCGTTCTGCAGCAGTaGTTGCTTCAGATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWVVLQQ*LLQILQ Trigger: CTGGAGGATCTGAAGCAAGCACTGCTGCAGAACGAC...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTCATTTCCAAGATTCCTaGGCAAAGAGGCAATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSHFQDS*AKRQWS Trigger: TGACCATTGCCTCTTTGCCCAGGAATCTTGGAAATG...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGTCCCAAAGATAACCTaGGGAACTCTGCCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWVPKIT*GTLPPL Trigger: AAGTGGAGGCAGAGTTCCTCAGGTTATCTTTGGGAC...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACGAACGCTTTTTAATCTaGCAGTCATCTTCATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WGIKRSQLLRTLALHYSYERFLI*QSSSSG Trigger: GCCAGATGAAGATGACTGTCAGATTAAAAAGCGTTC...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGCCATCTTCTGGTTCCTaGTCTGGGGGACCTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWPSSGS*SGGPFT Trigger: TGTAAAAGGTCCCCCAGAGCAGGAACCAGAAGATGG...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000135984.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTAAAGACCTGTCGTTCTaGAGCAGTGCTTGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGKDLSF*SSACFR Trigger: TCTGAAGCAAGCACTGCTGCAGAACGACAGGTCTTT...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTAGTCTGTTCAGACGATaGCTGTGTGAGATACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGSLFRR*LCEILP Trigger: AGGGAGTATCTCACACAGCCATCGTCTGAACAGACT...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTTGGGCAAAGAGGCAATaGTCACTCTTCGAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGWAKRQ*SLFEEK Trigger: CTTCTCTTCGAAGAGTGACCATTGCCTCTTTGCCCA...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTTCCAGAGAGAAATTATaGCACCCTCTTGTCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGSREKL*HPLVTS Trigger: GGACGTGACAAGAGGGTGCCATAATTTCTCTCTGGA...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
||
| CDS-3UTR TCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGATTATTTTCCATGCCTaGCACCAGCCCCACATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWIIFHA*HQPHIS Trigger: GGAAATGTGGGGCTGGTGTCAGGCATGGAAAATAAT...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTTCACCAGAAGCCATGTaGAAAATGTCTGATCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGSPEAM*KMSDPD Trigger: GTCTGGATCAGACATTTTGCACATGGCTTCTGGTGA...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTTTCTCGTCTGTACTCTaGTCCTCGTTCATTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IKSDASHSESSLKYPRWGFSSVL*SSFILV Trigger: TACCAGAATGAACGAGGACCAGAGTACAGACGAGAA...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032396.13 |
||
| CDS-3UTR CCA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTGAAGAGAAGATGGCTTaGAATTTAGAGAAGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CWGIKRSQLLRTLALHYSEEKMA*NLEKMN Trigger: GTTCATCTTCTCTAAATTCCAAGCCATCTTCTCTTC...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CCA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGAAGAGAAGATGGCTTaGAATTTAGAGAAGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSDASHSESSLKYPRWEEKMA*NLEKMN Trigger: GTTCATCTTCTCTAAATTCCAAGCCATCTTCTCTTC...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS CCA 90 bp | AGAAGCTCCTGTCCCAAGATGGAGCCTTCCGTGGGGAGTGGGCACTaGCACCCTCTTGTCACGTCCAAAGCCCCATCTTCTGGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSCPKMEPSVGSGH*HPLVTSKAPSSGSC Trigger: GCAGGAACCAGAAGATGGGGCTTTGGACGTGACAAGAGGGTGCCAGTGCCCACTCCCCACGGAAGGCTCCATCTTGGGACAGGAGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000152571.8 |
||
| CDS CCA 90 bp | GGTCCTCGTTCATTCTGGTACAGTCTAGAAGCTCCTGTCCCAAGATaGAGCCTTCCGTGGGGAGTGGGCACTGGCACCCTCTTGTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GPRSFWYSLEAPVPR*SLPWGVGTGTLLSR Trigger: ACGTGACAAGAGGGTGCCAGTGCCCACTCCCCACGGAAGGCTCCATCTTGGGACAGGAGCTTCTAGACTGTACCAGAATGAACGAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000152571.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCCCACTGAGCTGCAGATaGTGCCCCTGTCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSDASHSESSLKYPRWGPPLSCR*CPCPRP Trigger: TGGCCTGGGACAGGGGCACAATCTGCAGCTCAGTGG...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CAA 90 bp | AAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCCCTGGCAGAGGCGGCTCTaGCTTCCTCCTCCTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KSDASHSESSLKYPRWGPWQRRL*LPPPSH Trigger: GTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCCA...GGGACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTTACCCACTGAGCTGCAGATaGTGCCCCTGTCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGIKRSQLLRTLALHYSYPLSCR*CPCPRP Trigger: TGGCCTGGGACAGGGGCACAATCTGCAGCTCAGTGG...GTAACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTAGCTGGGATGCAGCCTaGGCCACGCCCACACTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: IKSDASHSESSLKYPRWGSWDAA*ATPTLV Trigger: CACGAGTGTGGGCGTGGCCAAGGCTGCATCCCAGCT...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS CCA 90 bp | TGTGTGAGATACTCCCTGAGCTGTGACGGGCTCTCGGAATACAAGTaGTCAGCACCATTCTCCTCAAACTGGACTCTGTGCCCATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: CVRYSLSCDGLSEYK*SAPFSSNWTLCPFK Trigger: TTTAAATGGGCACAGAGTCCAGTTTGAGGAGAATGGTGCTGACCACTTGTATTCCGAGAGCCCGTCACAGCTCAGGGAGTATCTCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152571.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTCTGATCCAGACTCACTaGACGTCACAGTGCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CWGIKRSQLLRTLALHYSLIQTH*TSQCSP Trigger: CGGAGAGCACTGTGACGTCAAGTGAGTCTGGATCAG...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS CCA 90 bp | GACGGGCTCTCGGAATACAAGTGGTCAGCACCATTCTCCTCAAACTaGACTCTGTGCCCATTTAAATGTTCGGAAGAGAGGAACAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DGLSEYKWSAPFSSN*TLCPFKCSEERNSV Trigger: AACACTGTTCCTCTCTTCCGAACATTTAAATGGGCACAGAGTCCAGTTTGAGGAGAATGGTGCTGACCACTTGTATTCCGAGAGCCCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152571.8 |
||
| CDS-3UTR CAA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGTGGCAGAGGCGGCTCTaGCTTCCTCCTCCTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SIKSDASHSESSLKYPRWWQRRL*LPPPSH Trigger: GTGAGAAGGAGGAGGAAGCAAGAGCCGCCTCTGCCA...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTGTTCTGCAGCAGTGCTaGCTTCAGATCCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IKSDASHSESSLKYPRWGVLQQC*LQILQL Trigger: GAGCTGGAGGATCTGAAGCAAGCACTGCTGCAGAAC...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS GCA 90 bp | TCGGAATACAAGTGGTCAGCACCATTCTCCTCAAACTGGACTCTGTaGCCATTTAAATGTTCGGAAGAGAGGAACAGTGTTCTACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: SEYKWSAPFSSNWTL*PFKCSEERNSVLLT Trigger: CGTCAGTAGAACACTGTTCCTCTCTTCCGAACATTTAAATGGGCACAGAGTCCAGTTTGAGGAGAATGGTGCTGACCACTTGTATTCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152571.8 |
||
| CDS-3UTR CAA 90 bp | TCAATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGCTGATCCAGACTCACTaGACGTCACAGTGCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SIKSDASHSESSLKYPRWLIQTH*TSQCSP Trigger: CGGAGAGCACTGTGACGTCAAGTGAGTCTGGATCAG...CCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
||
| CDS TCA 90 bp | CTCTGTGCCCATTTAAATGTTCGGAAGAGAGGAACAGTGTTCTACTaGCGTCTGTACTCTGGTCCTCGTTCATTCTGGTACAGTCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LCAHLNVRKRGTVFY*RLYSGPRSFWYSLE Trigger: TTCTAGACTGTACCAGAATGAACGAGGACCAGAGTACAGACGTCAGTAGAACACTGTTCCTCTCTTCCGAACATTTAAATGGGCACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152571.8 |
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| CDS-3UTR CAA 90 bp | TGTTGGGGAATAAAAAGATCCCAGCTGCTGAGGACCCTAGCTTTGCACTATAGTCGAAGAGAAGATGGCTaGGAATTTAGAGAAGATGAA | + |
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Preference number: 5 (lower is better) Translates to: CWGIKRSQLLRTLALHYSRREDG*EFREDE Trigger: TTCATCTTCTCTAAATTCCAAGCCATCTTCTCTTCG...ACTATAGTGCAAAGCTAGGGTCCTCAGCAGCTGGGATCTTTTTATTCCCCAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
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| CDS-3UTR CAA 90 bp | ATAAAGTCTGATGCCTCTCACTCAGAAAGCTCATTAAAATACCCTAGGTGGGGTCGAAGAGAAGATGGCTaGGAATTTAGAGAAGATGAA | + |
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Preference number: 5 (lower is better) Translates to: IKSDASHSESSLKYPRWGRREDG*EFREDE Trigger: TTCATCTTCTCTAAATTCCAAGCCATCTTCTCTTCG...ACCCCACCTAGGGTATTTTAATGAGCTTTCTGAGTGAGAGGCATCAGACTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000132948.2 |
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| CDS CCA 72 bp | AAGCTCCTGTCCCAAGATGGAGCCTTCCGTGGGGAGTaGGCACTGGCACCCTCTTGTCACGTCCAAAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: KLLSQDGAFRGE*ALAPSCHVQSP Trigger: GGGGCTTTGGACGTGACAAGAGGGTGCCAGTGCCCACTCCCCACGGAAGGCTCCATCTTGGGACAGGAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000152571.8 |
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| CDS CAA 72 bp | TGGAGCCTTCCGTGGGGAGTGGGCACTGGCACCCTCTaGTCACGTCCAAAGCCCCATCTTCTGGTTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: WSLPWGVGTGTL*SRPKPHLLVPA Trigger: AGCAGGAACCAGAAGATGGGGCTTTGGACGTGACAAGAGGGTGCCAGTGCCCACTCCCCACGGAAGGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000152571.8 |
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| CDS CCA 72 bp | AGTCTAGAAGCTCCTGTCCCAAGATGGAGCCTTCCGTaGGGAGTGGGCACTGGCACCCTCTTGTCACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLEAPVPRWSLP*GVGTGTLLSRP Trigger: TGGACGTGACAAGAGGGTGCCAGTGCCCACTCCCCACGGAAGGCTCCATCTTGGGACAGGAGCTTCTAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000152571.8 |
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| CDS CCA 72 bp | TCATTCTGGTACAGTCTAGAAGCTCCTGTCCCAAGATaGAGCCTTCCGTGGGGAGTGGGCACTGGCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: SFWYSLEAPVPR*SLPWGVGTGTL Trigger: GAGGGTGCCAGTGCCCACTCCCCACGGAAGGCTCCATCTTGGGACAGGAGCTTCTAGACTGTACCAGAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032396.13 ENSMUST00000152571.8 |
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| CDS CAA 90 bp | GGAAGAGAGTTCCTATTTCCTCCAGAGAGAAATTATGGCACCCTCTaGTCACGTCCAAAGCCCCATCTTCTGGTTCCTGCTCTGGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GREFLFPPERNYGTL*SRPKPHLLVPALGD Trigger: GTCCCCCAGAGCAGGAACCAGAAGATGGGGCTTTGGACGTGACAAGAGGGTGCCATAATTTCTCTCTGGAGGAAATAGGAACTCTCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135984.8 |
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| CDS CCA 72 bp | GAATACAAGTGGTCAGCACCATTCTCGTCTGTACTCTaGTCCTCGTTCATTCTGGTACAGTCTAGAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: EYKWSAPFSSVL*SSFILVQSRSS Trigger: GGAGCTTCTAGACTGTACCAGAATGAACGAGGACCAGAGTACAGACGAGAATGGTGCTGACCACTTGTATTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032396.13 |
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| CDS GCA 72 bp | AAGTGGTCAGCACCATTCTCCTCAAACTGGACTCTGTaGCCATTTAAATGTTCGGAAGAGAGGAACAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: KWSAPFSSNWTL*PFKCSEERNSV Trigger: AACACTGTTCCTCTCTTCCGAACATTTAAATGGGCACAGAGTCCAGTTTGAGGAGAATGGTGCTGACCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152571.8 |
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