Pregenerated sensors for LRIT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043418Ensembl transcript IDs: ENSMUST00000057176.5
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCTaGTTTCTTATAGAACCTAGGACCACCAGCCCGGGAATGGCACCA | + |
|
Preference number: 1 (lower is better) Translates to: DAEAMEGCCKMACSV*FLIEPRTTSPGMAP Trigger: TGGTGCCATTCCCGGGCTGGTGGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR GCA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTaGTCAGTCTGCTTTCTTATAGAACCTAGGACCACCAGCCCGGGA | + |
|
Preference number: 1 (lower is better) Translates to: PGTDAEAMEGCCKMA*SVCFLIEPRTTSPG Trigger: TCCCGGGCTGGTGGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR GCA 90 bp | AGGAACCTGGAGCCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTaGAAAATGGCTTGCTCAGTCTGCTTTCTTATAGAACCTAGGACC | + |
|
Preference number: 1 (lower is better) Translates to: RNLEPGTDAEAMEGC*KMACSVCFLIEPRT Trigger: GGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGGCTCCAGGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR TCA 90 bp | GGAAAGGGTTTATTTGGCCTACACTTCTGTGTCACAATACATTGTTaGAAGAAGCTAGGACAGAAACTCGAACAGGGAAGGAACCTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: GKGLFGLHFCVTIHC*KKLGQKLEQGRNLE Trigger: CTCCAGGTTCCTTCCCTGTTCGAGTTTCTGTCCTAGCTTCTTTCAACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CCA 90 bp | TTGCTTGATAAATGGATGGAACCAAGTTGTGCTGTCATGGGAAGTTaGATTCAGGAACTAGAGGTCTATTCATTTCCATGCCATGGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: LLDKWMEPSCAVMGS*IQELEVYSFPCHGG Trigger: CCCACCATGGCATGGAAATGAATAGACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTCCATCCATTTATCAAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CCA 90 bp | TCAATGCATCCACATGAGCACAGTGCTTGTAGTAAGGCCAGTTGTTaGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: SMHPHEHSACSKASC*LICKTAESILCRPV Trigger: CACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGTGCTCATGTGGATGCATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CCA 90 bp | TTAATTAGAACACAGTGGCTGCTCAAGAAATCCTTGCTTGATAAATaGATGGAACCAAGTTGTGCTGTCATGGGAAGTTGGATTCAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: LIRTQWLLKKSLLDK*MEPSCAVMGSWIQE Trigger: TTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTCCATCCATTTATCAAGCAAGGATTTCTTGAGCAGCCACTGTGTTCTAATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCCCACCAGCCCGGGAATaGCACCACCCACAGTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PGTDAEAMEGCCKMACSVPPARE*HHPQWA Trigger: TGCCCACTGTGGGTGGTGCCATTCCCGGGCTGGTGG...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGTGCTGCAAAATGGCTTGCTCAGTCTGCTTTCTTATAGAACCTAGGACCACCGATGGAACCAAGTTGTaGTGTCATGGGAAGTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GCCKMACSVCFLIEPRTTDGTKL*CHGKLD Trigger: ATCCAACTTCCCATGACAGCACAACTTGGTTCCATC...GGTGGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTCAAGTTGTGCTGTCATaGGAAGTTGGATTCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GLFVKQQNPSSVDQCPATQVVLS*EVGFRN Trigger: GTTCCTGAATCCAACTTCCCATGACAGCACAACTTG...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CAA 90 bp | GGGAAAGGGTTTATTTGGCCTACACTTCTGTGTCACAATACATTGTaGAAAGAAGCTAGGACAGAAACTCGAACAGGGAAGGAACCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GKGFIWPTLLCHNTL*KEARTETRTGKEPG Trigger: TCCAGGTTCCTTCCCTGTTCGAGTTTCTGTCCTAGCTTCTTTCAACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTTGCTTGATAAATGGATaGAACCAAGTTGTGCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GLFVKQQNPSSVDQCPATCLING*NQVVLS Trigger: TGACAGCACAACTTGGTTCCATCCATTTATCAAGCA...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CAA 90 bp | GAAGGGAAAGGGTTTATTTGGCCTACACTTCTGTGTCACAATACATaGTTGAAAGAAGCTAGGACAGAAACTCGAACAGGGAAGGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: EGKGFIWPTLLCHNT*LKEARTETRTGKEP Trigger: AGGTTCCTTCCCTGTTCGAGTTTCTGTCCTAGCTTCTTTCAACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTTGCTCAAGAAATCCTTaGTTGATAAATGGATGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GLFVKQQNPSSVDQCPATCSRNP*LINGWN Trigger: GTTCCATCCATTTATCAAGCAAGGATTTCTTGAGCA...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCATCAAATACCTTAATTAGAACACAGTGGCTGCTCAAGAAATCCTTGCTTGCTGTCATGGGAAGTTaGATTCAGGAACTAGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSSNTLIRTQWLLKKSLLAVMGS*IQELEV Trigger: GACCTCTAGTTCCTGAATCCAACTTCCCATGACAGC...AAGCAAGGATTTCTTGAGCAGCCACTGTGTTCTAATTAAGGTATTTGATGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR TCA 72 bp | GAAACTCGAACAGGGAAGGAACCTGGAGCCAGGAACTaGTGCAGAGGCCATGGAGGGGTGCTGCAAAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: ETRTGKEPGARN*CRGHGGVLQNG Trigger: GCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGGCTCCAGGTTCCTTCCCTGTTCGAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR GCA 72 bp | GCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCTaGTTTCTTATAGAACCTAGGACCACCAGCCCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AMEGCCKMACSV*FLIEPRTTSPG Trigger: TCCCGGGCTGGTGGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR CAA 90 bp | AACCTGGAGCCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTATGGATGGAACCAAGTaGTGCTGTCATGGGAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: NLEPGTDAEAMEGCCKMAMDGTK*CCHGKL Trigger: CAACTTCCCATGACAGCACAACTTGGTTCCATCCAT...AGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGGCTCCAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR GCA 72 bp | GATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTaGTCAGTCTGCTTTCTTATAGAACCTAGGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: DAEAMEGCCKMA*SVCFLIEPRTT Trigger: GGTGGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR GCA 72 bp | CTGGAGCCAGGAACTGATGCAGAGGCCATGGAGGGGTaGTGCAAAATGGCTTGCTCAGTCTGCTTTCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: LEPGTDAEAMEG*CKMACSVCFLI Trigger: TATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR GCA 72 bp | GAGCCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTaGAAAATGGCTTGCTCAGTCTGCTTTCTTATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EPGTDAEAMEGC*KMACSVCFLIE Trigger: TTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR CAA 90 bp | AACCTGGAGCCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTCTGCTCAAGAAATCCTaGCTTGATAAATGGATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NLEPGTDAEAMEGCCKMALLKKS*LDKWME Trigger: TTCCATCCATTTATCAAGCAAGGATTTCTTGAGCAG...AGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGGCTCCAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CCA 72 bp | ACACAGTGGCTGCTCAAGAAATCCTTGCTTGATAAATaGATGGAACCAAGTTGTGCTGTCATGGGAAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TQWLLKKSLLDK*MEPSCAVMGSW Trigger: CCAACTTCCCATGACAGCACAACTTGGTTCCATCCATTTATCAAGCAAGGATTTCTTGAGCAGCCACTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CCA 72 bp | AGTGGCTGCTCAAGAAATCCTTGCTTGATAAATGGATaGAACCAAGTTGTGCTGTCATGGGAAGTTGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: SGCSRNPCLING*NQVVLSWEVGF Trigger: GAATCCAACTTCCCATGACAGCACAACTTGGTTCCATCCATTTATCAAGCAAGGATTTCTTGAGCAGCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CCA 72 bp | CCACATGAGCACAGTGCTTGTAGTAAGGCCAGTTGTTaGCTTATTTGTAAAACAGCAGAATCCATCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PHEHSACSKASC*LICKTAESILC Trigger: ACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGTGCTCATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGCTTGTAGTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATGCTGTCATGGGAAGTaGGATTCAGGAACTAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TVLVVRPVVGLFVKQQNPCCHGK*DSGTRG Trigger: ACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCA...TGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR TCA 72 bp | TTATTTGGCCTACACTTCTGTGTCACAATACATTGTTaGAAGAAGCTAGGACAGAAACTCGAACAGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFGLHFCVTIHC*KKLGQKLEQGR Trigger: CCTTCCCTGTTCGAGTTTCTGTCCTAGCTTCTTTCAACAATGTATTGTGACACAGAAGTGTAGGCCAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCGTCACTGTGAGCCACTaGAGCAAGATGCCATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PGTDAEAMEGCCKMACSVVTVSH*SKMPCT Trigger: AGTGCATGGCATCTTGCTGCAGTGGCTCACAGTGAC...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTCAGCTCTCTCAGCTCTaGCAGGTCCTCCAGGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFVKQQNPSSVDQCPATQLSQL*QVLQGA Trigger: GGCGCCCTGGAGGACCTGCCAGAGCTGAGAGAGCTG...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCTCCTGCCGATGGAGTTaGAGGCCATGCAGGTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGTDAEAMEGCCKMACSVSCRWS*RPCRYN Trigger: ATTATACCTGCATGGCCTTCAACTCCATCGGCAGGA...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | AACCTGGAGCCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTGGTCAACATAGGCACTaGCCTCTGAAGAGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLEPGTDAEAMEGCCKMAGQHRH*PLKRWK Trigger: TTTCCACCTCTTCAGAGGTCAGTGCCTATGTTGACC...AGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGGCTCCAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCCCGTTTCTGATAGGCTaGCCAGTTCAAGAAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: PGTDAEAMEGCCKMACSVPFLIG*PVQEDT Trigger: GGTGTCTTCTTGAACTGGCCAGCCTATCAGAAACGG...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTGCAAAATGGCTTGCTCAGTCTGCTTTCTTATAGAACCTAGGACCACCCCATGCAATGGTTGGTaGGGGACTGGCTTGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCCKMACSVCFLIEPRTTPCNGW*GTGLCK Trigger: TTTGCACAAGCCAGTCCCTCACCAACCATTGCATGG...GGTGGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCCCTCAGGCTGAGACATaGTTTATATTTTGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGTDAEAMEGCCKMACSVPQAET*FIFCSR Trigger: CCTGCTACAAAATATAAAGCATGTCTCAGCCTGAGG...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTGCAAAATGGCTTGCTCAGTCTGCTTTCTTATAGAACCTAGGACCACCGCCCACCACTGTCTTTaGCTGTCACAAAGACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GCCKMACSVCFLIEPRTTAHHCL*LSQRPH Trigger: GTGTGGTCTTTGTGACAGGCAAAGACAGTGGTGGGC...GGTGGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCGCGACAATACCATATTaGAAAGAAACTCAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGTDAEAMEGCCKMACSVATIPY*KETQLH Trigger: GTGGAGCTGAGTTTCTTTCCAATATGGTATTGTCGC...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GAACCAAGTTGTGCTGTCATGGGAAGTTGGATTCAGGAACTAGAGGTCTATTCACCGCCATCTACCAGTTaGGCTGCTGGGATGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPSCAVMGSWIQELEVYSPPSTS*AAGMTS Trigger: GCTTGTCATCCCAGCAGCTCAACTGGTAGATGGCGG...TGAATAGACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTGCAAAATGGCTTGCTCAGTCTGCTTTCTTATAGAACCTAGGACCACCCACACAAGACTACAGTaGCATGCAAGAGGTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCCKMACSVCFLIEPRTTHTRLQ*HARGAH Trigger: GTGAGCACCTCTTGCATGTCACTGTAGTCTTGTGTG...GGTGGTCCTAGGTTCTATAAGAAAGCAGACTGAGCAAGCCATTTTGCAGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | TCTTCATCAAATACCTTAATTAGAACACAGTGGCTGCTCAAGAAATCCTTGCTTCCCGCAGGAGAGGGGTaGCGCGGAACGCTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSSNTLIRTQWLLKKSLLPAGEG*RGTLSM Trigger: CATGGACAGCGTTCCGCGCCACCCCTCTCCTGCGGG...AAGCAAGGATTTCTTGAGCAGCCACTGTGTTCTAATTAAGGTATTTGATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTAGGTTGGTTAGGAACTaGAGAGCCAGTTCTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLFVKQQNPSSVDQCPATRLVRN*RASSGT Trigger: TGTCCCAGAACTGGCTCTTCAGTTCCTAACCAACCT...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTCATGCACTGTCTGCTTaGCCACTCGTAGGTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFVKQQNPSSVDQCPATHALSA*PLVGQH Trigger: ATGTTGACCTACGAGTGGTCAAGCAGACAGTGCATG...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCAAGGTTGGTCACTGTaGGCCACTGCAGCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ASCWLICKTAESILCRPVQGWSL*ATAARC Trigger: GCATCTTGCTGCAGTGGCTCACAGTGACCAACCTTG...CACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTGAGGTGGAAAGGAAATaGAATCCAGGCATGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLFVKQQNPSSVDQCPATEVERK*NPGMAC Trigger: ACAGGCCATGCCTGGATTGCATTTCCTTTCCACCTC...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTATGCCATGCACTGTCTaGTTGACCACTCGTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFVKQQNPSSVDQCPATMPCTV*LTTRRS Trigger: TGACCTACGAGTGGTCAAGCAGACAGTGCATGGCAT...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTATTCCAGGGCCTATGTaGACCACCTTCTTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLFVKQQNPSSVDQCPATIPGPM*TTFFLR Trigger: TCTCAGGAAGAAGGTGGTCCACATAGGCCCTGGAAT...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTTGTAGTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCACCCTGGCTTGGAGGCTaGTTCCTCAGGCTGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVVRPVVGLFVKQQNPPWLGG*FLRLRH Trigger: ATGTCTCAGCCTGAGGAATCAGCCTCCAAGCCAGGG...TGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCTTAGGGTTTTCCTGTaGAGAGGACAACGGCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASCWLICKTAESILCRPVLRVFL*RGQRRQ Trigger: TTGGCGCCGTTGTCCTCTTCACAGGAAAACCCTAAG...CACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GTTGGAAGGGAAAGGGTTTATTTGGCCTACACTTCTGTGTCACAATACATTGTTAGCACCCACAGGCAGTaGCAGGAGCACAGCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: VGRERVYLAYTSVSQYIVSTHRQ*QEHSTQ Trigger: TTGTGTGCTGTGCTCCTGGCACTGCCTGTGGGTGCT...AACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCCCTTCCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTCACCTGAAGGGTCTTTaGAAGAGTTATCCTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLFVKQQNPSSVDQCPATHLKGL*KSYPCT Trigger: AGTGCAAGGATAACTCTTTCAAAGACCCTTCAGGTG...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GAACCAAGTTGTGCTGTCATGGGAAGTTGGATTCAGGAACTAGAGGTCTATTCATGCAGCAAGATGCCATaGACTGTCTGCTTGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: EPSCAVMGSWIQELEVYSCSKMP*TVCLTT Trigger: AGTGGTCAAGCAGACAGTGCATGGCATCTTGCTGCA...TGAATAGACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTTGTAGTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCAGTGACATGCAAGAGGTaGTCACGACCCTCTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLVVRPVVGLFVKQQNPVTCKR*SRPSSP Trigger: TGGGCTAGAGGGTCGTGAGCACCTCTTGCATGTCAC...TGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | GAACCAAGTTGTGCTGTCATGGGAAGTTGGATTCAGGAACTAGAGGTCTATTCATCCAGGGCGCCTAGGTaGATCACAGTGACATTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EPSCAVMGSWIQELEVYSSRAPR*ITVTLL Trigger: TAACAATGTCACTGTGATCCACCTAGGCGCCCTGGA...TGAATAGACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACACGGACTTGACAAACTaGGCAAGTCCCCTTAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VRPVVGLFVKQQNPSSVDTDLTN*ASPLNR Trigger: CCGATTAAGGGGACTTGCTCAGTTTGTCAAGTCCGT...GTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GAACCAAGTTGTGCTGTCATGGGAAGTTGGATTCAGGAACTAGAGGTCTATTCAATAGGCACTGACCTCTaGAGAGGTGGAAAGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: EPSCAVMGSWIQELEVYSIGTDL*RGGKEM Trigger: CATTTCCTTTCCACCTCTTCAGAGGTCAGTGCCTAT...TGAATAGACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACAAGACTACAGTGACATaGAAGAGGTGCTCACGACCC | + |
|
Preference number: 4 (lower is better) Translates to: VRPVVGLFVKQQNPSSVDKTTVT*KRCSRP Trigger: GGGTCGTGAGCACCTCTTGCATGTCACTGTAGTCTT...GTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | GAACCAAGTTGTGCTGTCATGGGAAGTTGGATTCAGGAACTAGAGGTCTATTCAAACTGCTCATGTTGGTaGAAAACCCCTGGGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EPSCAVMGSWIQELEVYSNCSCW*KTPGKV Trigger: AACTTTCCCAGGGGTTTTTCACCAACATGAGCAGTT...TGAATAGACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAAATTCTCTCCACGTaGTCAGGGGATACTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VRPVVGLFVKQQNPSSVDQILST*SGDTSM Trigger: CATGGAAGTATCCCCTGAGCACGTGGAGAGAATTTG...GTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACTGGTTGGTGAGGGACTaGCTTGTGCAAAACATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRPVVGLFVKQQNPSSVDWLVRD*LVQNIA Trigger: TGCAATGTTTTGCACAAGCCAGTCCCTCACCAACCA...GTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | GAACCAAGTTGTGCTGTCATGGGAAGTTGGATTCAGGAACTAGAGGTCTATTCAGATACCTTCTGCAATTaGCGAGGCCAACACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPSCAVMGSWIQELEVYSDTFCN*RGQHIK Trigger: TTTGATGTGTTGGCCTCGCCAATTGCAGAAGGTATC...TGAATAGACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | TTAATAGGTCAGAGCTCTATTGGCTTTAGCTTTATGAAGATAAATACTGTGTCCCGCTGTCCATGGTACTaGACGGAGTTTGTTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIGQSSIGFSFMKINTVSRCPWY*TEFVPL Trigger: GAGGGGAACAAACTCCGTTCAGTACCATGGACAGCG...GGACACAGTATTTATCTTCATAAAGCTAAAGCCAATAGAGCTCTGACCTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GTTGGAAGGGAAAGGGTTTATTTGGCCTACACTTCTGTGTCACAATACATTGTTGTCTCATGTAAAAGCTaGCCTGCCTTAGAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGRERVYLAYTSVSQYIVVSCKS*PALETG Trigger: TCCTGTCTCTAAGGCAGGGCAGCTTTTACATGAGAC...AACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCCCTTCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTTGTAGTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCAATCTACCAGTTGAGCTaGTGGGATGACAAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVLVVRPVVGLFVKQQNPIYQLS*WDDKLR Trigger: TCTCAGCTTGTCATCCCAGCAGCTCAACTGGTAGAT...TGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CAA 72 bp | GGGTTTATTTGGCCTACACTTCTGTGTCACAATACATaGTTGAAAGAAGCTAGGACAGAAACTCGAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFIWPTLLCHNT*LKEARTETRTG Trigger: CCCTGTTCGAGTTTCTGTCCTAGCTTCTTTCAACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CAA 72 bp | ACCTTAATTAGAACACAGTGGCTGCTCAAGAAATCCTaGCTTGATAAATGGATGGAACCAAGTTGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLIRTQWLLKKS*LDKWMEPSCAV Trigger: GACAGCACAACTTGGTTCCATCCATTTATCAAGCAAGGATTTCTTGAGCAGCCACTGTGTTCTAATTAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | GCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGTTTTCAATTCTCACTTaGTTGAGTTCTTCGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASCWLICKTAESILCRPVFSILT*LSSSGK Trigger: CTTTCCCGAAGAACTCAAGCAAGTGAGAATTGAAAA...CACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | TTAATAGGTCAGAGCTCTATTGGCTTTAGCTTTATGAAGATAAATACTGTGTCCACAGAACGGCTGCACTaGATGTATAACCCAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LIGQSSIGFSFMKINTVSTERLH*MYNPRD Trigger: GTCTCTTGGGTTATACATGCAGTGCAGCCGTTCTGT...GGACACAGTATTTATCTTCATAAAGCTAAAGCCAATAGAGCTCTGACCTATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | GTTGGAAGGGAAAGGGTTTATTTGGCCTACACTTCTGTGTCACAATACATTGTTTTCGGGAAAGTTGTCTaGAATCTTTCCCAAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VGRERVYLAYTSVSQYIVFGKVV*NLSQRH Trigger: ATGTCTTTGGGAAAGATTCCAGACAACTTTCCCGAA...AACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCCCTTCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CAA 72 bp | TTTATTTGGCCTACACTTCTGTGTCACAATACATTGTaGAAAGAAGCTAGGACAGAAACTCGAACAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIWPTLLCHNTL*KEARTETRTGK Trigger: CTTCCCTGTTCGAGTTTCTGTCCTAGCTTCTTTCAACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCATCAAATACCTTAATTAGAACACAGTGGCTGCTCAAGAAATCCTTGCTTCAATTCTCACTTGCTTaGGTTCTTCGGGAAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSNTLIRTQWLLKKSLLQFSLA*VLRESC Trigger: ACAACTTTCCCGAAGAACTCAAGCAAGTGAGAATTG...AAGCAAGGATTTCTTGAGCAGCCACTGTGTTCTAATTAAGGTATTTGATGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR GCA 90 bp | TCTTATACTTTGCAGGATAATGCATATGAGATGTTCTGTGTAAACCTTATAGGGGCTTGTGCAAAACATTaGAGAGTCACGTTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SYTLQDNAYEMFCVNLIGACAKH*RVTFFP Trigger: AGGAAAGAACGTGACTCTGCAATGTTTTGCACAAGC...CCCTATAAGGTTTACACAGAACATCTCATATGCATTATCCTGCAAAGTATAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CCA 90 bp | TCTTATACTTTGCAGGATAATGCATATGAGATGTTCTGTGTAAACCTTATAGGGTCAAGAAGACACCCTTaGATACAACTGTCAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYTLQDNAYEMFCVNLIGSRRHP*IQLSTC Trigger: ACAGGTTGACAGTTGTATCCAAGGGTGTCTTCTTGA...CCCTATAAGGTTTACACAGAACATCTCATATGCATTATCCTGCAAAGTATAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| 3UTR CAA 72 bp | ATGACTAAAAAGGAAGTTGGAAGGGAAAGGGTTTATTaGGCCTACACTTCTGTGTCACAATACATTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MTKKEVGRERVY*AYTSVSQYIVE Trigger: TTCAACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCCCTTCCAACTTCCTTTTTAGTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCCACACTGGCCCTGGCTaGGAGGCTGATTCCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTDAEAMEGCCKMACSVHTGPG*EADSSG Trigger: GCCTGAGGAATCAGCCTCCAAGCCAGGGCCAGTGTG...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 90 bp | GGAACTGAAGAGCCAGTTCTGGGACAGAATCAATCCGGTTGTGTTTaGGATCCAAAACCCGCAGGAGAGGGGTGGCGCGGAACGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTEEPVLGQNQSGCV*DPKPAGEGWRGTLS Trigger: GGACAGCGTTCCGCGCCACCCCTCTCCTGCGGGTTTTGGATCTCAAACACAACCGGATTGATTCTGTCCCAGAACTGGCTCTTCAGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | AACCTGGAGCCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGTTCCTCAGCAAGGTaGGTCACTGTGAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NLEPGTDAEAMEGCCKMACSSAR*VTVSHC Trigger: GCAGTGGCTCACAGTGACCAACCTTGCTGAGGAACA...AGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGGCTCCAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCACTTCCATGCAATGGTaGGTGAGGGACTGGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGTDAEAMEGCCKMACSVTSMQW*VRDWLV Trigger: CACAAGCCAGTCCCTCACCAACCATTGCATGGAAGT...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGAACTGATGCAGAGGCCATGGAGGGGTGCTGCAAAATGGCTTGCTCAGTCCCATGCACTGTCTGCTaGACCACTCGTAGGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: PGTDAEAMEGCCKMACSVPCTVC*TTRRST Trigger: TGTTGACCTACGAGTGGTCAAGCAGACAGTGCATGG...GACTGAGCAAGCCATTTTGCAGCACCCCTCCATGGCCTCTGCATCAGTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | AGTGCCAGGAGCACAGCACACAAGACTACAGTGACATGCAAGAGGTaGTCACGACCCTCTAGCCCACCACTGTCTTTGCCTGTCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SARSTAHKTTVTCKR*SRPSSPPLSLPVTK Trigger: CTTTGTGACAGGCAAAGACAGTGGTGGGCTAGAGGGTCGTGAGCACCTCTTGCATGTCACTGTAGTCTTGTGTGCTGTGCTCCTGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | GTTGTATGGACCCTGGGATACCCAGACATAAGCACCCACAGGCAGTaGCAGGAGCACAGCACACAAGACTACAGTGACATGCAAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVWTLGYPDISTHRQ*QEHSTQDYSDMQEV Trigger: CACCTCTTGCATGTCACTGTAGTCTTGTGTGCTGTGCTCCTGGCACTGCCTGTGGGTGCTTATGTCTGGGTATCCCAGGGTCCATACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | AGGGTGAACCATTGTTCCTCAGCAAGGTTGGTCACTGTGAGCCACTaGAGCAAGATGCCATGCACTGTCTGCTTGACCACTCGTAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVNHCSSARLVTVSH*SKMPCTVCLTTRRS Trigger: TGACCTACGAGTGGTCAAGCAGACAGTGCATGGCATCTTGCTGCAGTGGCTCACAGTGACCAACCTTGCTGAGGAACAATGGTTCACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | CACACACTGGCCCTGGCTTGGAGGCTGATTCCTCAGGCTGAGACATaGTTTATATTTTGTAGCAGGGAGAAGGTCATCCACGGCGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: HTLALAWRLIPQAET*FIFCSREKVIHGVC Trigger: ACATACGCCGTGGATGACCTTCTCCCTGCTACAAAATATAAAGCATGTCTCAGCCTGAGGAATCAGCCTCCAAGCCAGGGCCAGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | TACCTTCTGCAATTGGCGAGGCCAACACATCAAATTCTCTCCACGTaGTCAGGGGATACTTCCATGCAATGGTTGGTGAGGGACTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YLLQLARPTHQILST*SGDTSMQWLVRDWL Trigger: AAGCCAGTCCCTCACCAACCATTGCATGGAAGTATCCCCTGAGCACGTGGAGAGAATTTGATGTGTTGGCCTCGCCAATTGCAGAAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 90 bp | AGTCTCAGCTCTCTCAGCTCTGGCAGGTCCTCCAGGGCGCCTAGGTaGATCACAGTGACATTGTTAAAGTTGAGCCAAAGGTATTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLSSLSSGRSSRAPR*ITVTLLKLSQRYSK Trigger: TTTGGAATACCTTTGGCTCAACTTTAACAATGTCACTGTGATCCACCTAGGCGCCCTGGAGGACCTGCCAGAGCTGAGAGAGCTGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 90 bp | TCCACGTGCTCAGGGGATACTTCCATGCAATGGTTGGTGAGGGACTaGCTTGTGCAAAACATTGCAGAGTCACGTTCTTTCCTACCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: STCSGDTSMQWLVRD*LVQNIAESRSFLPG Trigger: TCCAGGTAGGAAAGAACGTGACTCTGCAATGTTTTGCACAAGCCAGTCCCTCACCAACCATTGCATGGAAGTATCCCCTGAGCACGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 90 bp | CAAAGACATAGACATGCACTGAAGGCTCCTGCCAAAACTCTCCTCTaGACAGGTACACTCTGGCAGACAGAACGGCTGCACTGCATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QRHRHALKAPAKTLL*TGTLWQTERLHCMY Trigger: ATACATGCAGTGCAGCCGTTCTGTCTGCCAGAGTGTACCTGTTCAGAGGAGAGTTTTGGCAGGAGCCTTCAGTGCATGTCTATGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 90 bp | TCTTTGCCTGTCACAAAGACCACACACTGGCCCTGGCTTGGAGGCTaGTTCCTCAGGCTGAGACATGCTTTATATTTTGTAGCAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLPVTKTTHWPWLGG*FLRLRHALYFVAGR Trigger: TCTCCCTGCTACAAAATATAAAGCATGTCTCAGCCTGAGGAATCAGCCTCCAAGCCAGGGCCAGTGTGTGGTCTTTGTGACAGGCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 90 bp | TCGGGAAAGTTGTCTGGAATCTTTCCCAAAGACATAGACATGCACTaGAGGCTCCTGCCAAAACTCTCCTCTGAACAGGTACACTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGKLSGIFPKDIDMH*RLLPKLSSEQVHSG Trigger: GCCAGAGTGTACCTGTTCAGAGGAGAGTTTTGGCAGGAGCCTTCAGTGCATGTCTATGTCTTTGGGAAAGATTCCAGACAACTTTCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | CCAAAACTCTCCTCTGAACAGGTACACTCTGGCAGACAGAACGGCTaGACTGCATGTATAACCCAAGAGACCAGAACTTGCAAGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: PKLSSEQVHSGRQNG*TACITQETRTCKKQ Trigger: CTGTTTCTTGCAAGTTCTGGTCTCTTGGGTTATACATGCAGTGCAGCCGTTCTGTCTGCCAGAGTGTACCTGTTCAGAGGAGAGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 90 bp | GAAGGCCATGCAGGTATAATTACCGCCATCTACCAGTTGAGCTGCTaGGATGACAAGCTGAGACAGAATGATACCTTCTGCAATTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: EGHAGIITAIYQLSC*DDKLRQNDTFCNWR Trigger: TCGCCAATTGCAGAAGGTATCATTCTGTCTCAGCTTGTCATCCCAGCAGCTCAACTGGTAGATGGCGGTAATTATACCTGCATGGCCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 90 bp | TACGAATTCACCAGTATGAAAGGGGGACCAACGGACTTGACAAACTaGGCAAGTCCCCTTAATCGGCAGTCGCACAACCAAGGATTATTG | + |
|
Preference number: 5 (lower is better) Translates to: YEFTSMKGGPTDLTN*ASPLNRQSHNQGLL Trigger: CAATAATCCTTGGTTGTGCGACTGCCGATTAAGGGGACTTGCTCAGTTTGTCAAGTCCGTTGGTCCCCCTTTCATACTGGTGAATTCGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 90 bp | ATCCTCCTCCATGACTCTGTGACTCTCACCATCCTCATAGACACCTaGAGGGTCTTTGAAAGAGTTATCCTTGCACTGTGGTACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILLHDSVTLTILIDT*RVFERVILALWYCL Trigger: CAAGCAGTACCACAGTGCAAGGATAACTCTTTCAAAGACCCTTCAGGTGTCTATGAGGATGGTGAGAGTCACAGAGTCATGGAGGAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | GTTGAAGGCCATGCAGGTATAATTACCGCCATCTACCAGTTGAGCTaGTGGGATGACAAGCTGAGACAGAATGATACCTTCTGCAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: VEGHAGIITAIYQLS*WDDKLRQNDTFCNW Trigger: CCAATTGCAGAAGGTATCATTCTGTCTCAGCTTGTCATCCCAGCAGCTCAACTGGTAGATGGCGGTAATTATACCTGCATGGCCTTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGAGCCCACCACTGTCTTaGCCTGTCACAAAGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: ASCWLICKTAESILCRPVSPPLS*PVTKTT Trigger: TGTGGTCTTTGTGACAGGCAAAGACAGTGGTGGGCT...CACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCACCACTCACTGAAGTaGTATGGACCCTGGGATACC | + |
|
Preference number: 5 (lower is better) Translates to: ASCWLICKTAESILCRPVHHSLK*YGPWDT Trigger: GGTATCCCAGGGTCCATACAACTTCAGTGAGTGGTG...CACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 90 bp | GCTGTTGCCGTTTCTGATAGGCTGGCCAGTTCAAGAAGACACCCTTaGATACAACTGTCAACCTGTTGGAGGATATGTCAAGGTATATCA | + |
|
Preference number: 5 (lower is better) Translates to: AVAVSDRLASSRRHP*IQLSTCWRICQGIS Trigger: TGATATACCTTGACATATCCTCCAACAGGTTGACAGTTGTATCCAAGGGTGTCTTCTTGAACTGGCCAGCCTATCAGAAACGGCAACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 90 bp | GGCAGTCGCACAACCAAGGATTATTGTGCAGCGACAATACCATATTaGAAAGAAACTCAGCTCCACAACCAAGCTGTTGCCGTTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSRTTKDYCAATIPY*KETQLHNQAVAVSD Trigger: ATCAGAAACGGCAACAGCTTGGTTGTGGAGCTGAGTTTCTTTCCAATATGGTATTGTCGCTGCACAATAATCCTTGGTTGTGCGACTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACGGTACTGAACGGAGTTaGTTCCCCTCTAGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRPVVGLFVKQQNPSSVDGTERS*FPSSLS Trigger: GCTGAGACTAGAGGGGAACAAACTCCGTTCAGTACC...GTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACTCCACAACCAAGCTGTaGCCGTTTCTGATAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRPVVGLFVKQQNPSSVDSTTKL*PFLIGW Trigger: CCAGCCTATCAGAAACGGCAACAGCTTGGTTGTGGA...GTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | TACTTCCATGCAATGGTTGGTGAGGGACTGGCTTGTGCAAAACATTaGAGAGTCACGTTCTTTCCTACCTGGATAGTGACATTGACACTA | + |
|
Preference number: 5 (lower is better) Translates to: YFHAMVGEGLACAKH*RVTFFPTWIVTLTL Trigger: TAGTGTCAATGTCACTATCCAGGTAGGAAAGAACGTGACTCTGCAATGTTTTGCACAAGCCAGTCCCTCACCAACCATTGCATGGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 90 bp | CTGGCCAGTTCAAGAAGACACCCTTGGATACAACTGTCAACCTGTTaGAGGATATGTCAAGGTATATCAGGTTGGTTAGGAACTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LASSRRHPWIQLSTC*RICQGISGWLGTEE Trigger: CTCTTCAGTTCCTAACCAACCTGATATACCTTGACATATCCTCCAACAGGTTGACAGTTGTATCCAAGGGTGTCTTCTTGAACTGGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 90 bp | ATACAACTGTCAACCTGTTGGAGGATATGTCAAGGTATATCAGGTTaGTTAGGAACTGAAGAGCCAGTTCTGGGACAGAATCAATCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: IQLSTCWRICQGISG*LGTEEPVLGQNQSG Trigger: ACCGGATTGATTCTGTCCCAGAACTGGCTCTTCAGTTCCTAACCAACCTGATATACCTTGACATATCCTCCAACAGGTTGACAGTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | GGCTTATTTGTAAAACAGCAGAATCCATCCTCTGTAGACCAGTGCCCTGCCACTGTTTTCAATTCTCACTaGCTTGAGTTCTTCGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLFVKQQNPSSVDQCPATVFNSH*LEFFGK Trigger: TTTCCCGAAGAACTCAAGCAAGTGAGAATTGAAAAC...AGTGGCAGGGCACTGGTCTACAGAGGATGGATTCTGCTGTTTTACAAATAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | GAACCAAGTTGTGCTGTCATGGGAAGTTGGATTCAGGAACTAGAGGTCTATTCAAGTTCTTCGGGAAAGTaGTCTGGAATCTTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EPSCAVMGSWIQELEVYSSSSGK*SGIFPK Trigger: TTTGGGAAAGATTCCAGACAACTTTCCCGAAGAACT...TGAATAGACCTCTAGTTCCTGAATCCAACTTCCCATGACAGCACAACTTGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | ACAGTGCTTGTAGTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCAGGCTTGTGCAAAACATaGCAGAGTCACGTTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVLVVRPVVGLFVKQQNPGLCKT*QSHVLS Trigger: GGAAAGAACGTGACTCTGCAATGTTTTGCACAAGCC...TGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 90 bp | AACCCCTGGGAAAGTTCAAATAAGGGTGAGTTTTCAATTCTCACTTaGTTGAGTTCTTCGGGAAAGTTGTCTGGAATCTTTCCCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NPWESSNKGEFSILT*LSSSGKLSGIFPKD Trigger: GTCTTTGGGAAAGATTCCAGACAACTTTCCCGAAGAACTCAAGCAAGTGAGAATTGAAAACTCACCCTTATTTGAACTTTCCCAGGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | ACAGTGCTTGTAGTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCAACACCTGAAGGGTCTTaGAAAGAGTTATCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVLVVRPVVGLFVKQQNPTPEGS*KELSLH Trigger: GTGCAAGGATAACTCTTTCAAAGACCCTTCAGGTGT...TGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | GTTGGAAGGGAAAGGGTTTATTTGGCCTACACTTCTGTGTCACAATACATTGTTTCAATTCTCACTTGCTaGAGTTCTTCGGGAAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGRERVYLAYTSVSQYIVSILTC*SSSGKL Trigger: CAACTTTCCCGAAGAACTCAAGCAAGTGAGAATTGA...AACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCCCTTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | ACAGTGCTTGTAGTAAGGCCAGTTGTTGGCTTATTTGTAAAACAGCAGAATCCAACAGAATCAATCCGGTaGTGTTTGAGATCCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: TVLVVRPVVGLFVKQQNPTESIR*CLRSKT Trigger: GGTTTTGGATCTCAAACACAACCGGATTGATTCTGT...TGGATTCTGCTGTTTTACAAATAAGCCAACAACTGGCCTTACTACAAGCACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS-3UTR CAA 90 bp | GTTGGAAGGGAAAGGGTTTATTTGGCCTACACTTCTGTGTCACAATACATTGTTAGCGACAATACCATATaGGAAAGAAACTCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGRERVYLAYTSVSQYIVSDNTI*ERNSAP Trigger: TGGAGCTGAGTTTCTTTCCAATATGGTATTGTCGCT...AACAATGTATTGTGACACAGAAGTGTAGGCCAAATAAACCCTTTCCCTTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 90 bp | AGGAGAGGGGTGGCGCGGAACGCTGTCCATGGTACTGAACGGAGTTaGTTCCCCTCTAGTCTCAGCTCTCTCAGCTCTGGCAGGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRGVARNAVHGTERS*FPSSLSSLSSGRSS Trigger: GGAGGACCTGCCAGAGCTGAGAGAGCTGAGACTAGAGGGGAACAAACTCCGTTCAGTACCATGGACAGCGTTCCGCGCCACCCCTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | GTGGCGCGGAACGCTGTCCATGGTACTGAACGGAGTTaGTTCCCCTCTAGTCTCAGCTCTCTCAGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VARNAVHGTERS*FPSSLSSLSSG Trigger: GCCAGAGCTGAGAGAGCTGAGACTAGAGGGGAACAAACTCCGTTCAGTACCATGGACAGCGTTCCGCGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 72 bp | GAGCCAGTTCTGGGACAGAATCAATCCGGTTGTGTTTaGGATCCAAAACCCGCAGGAGAGGGGTGGCGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: EPVLGQNQSGCV*DPKPAGEGWRG Trigger: TCCGCGCCACCCCTCTCCTGCGGGTTTTGGATCTCAAACACAACCGGATTGATTCTGTCCCAGAACTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | AGAGCCAGTTCTGGGACAGAATCAATCCGGTTGTGTTaGAGATCCAAAACCCGCAGGAGAGGGGTGGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RASSGTESIRLC*RSKTRRRGVAR Trigger: CCGCGCCACCCCTCTCCTGCGGGTTTTGGATCTCAAACACAACCGGATTGATTCTGTCCCAGAACTGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | AAGAGGTGCTCACGACCCTCTAGCCCACCACTGTCTTaGCCTGTCACAAAGACCACACACTGGCCCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KRCSRPSSPPLS*PVTKTTHWPWL Trigger: AAGCCAGGGCCAGTGTGTGGTCTTTGTGACAGGCAAAGACAGTGGTGGGCTAGAGGGTCGTGAGCACCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 72 bp | ACCCTGGGATACCCAGACATAAGCACCCACAGGCAGTaGCAGGAGCACAGCACACAAGACTACAGTGACATG | + |
|
Preference number: 6 (lower is better) Translates to: TLGYPDISTHRQ*QEHSTQDYSDM Trigger: CATGTCACTGTAGTCTTGTGTGCTGTGCTCCTGGCACTGCCTGTGGGTGCTTATGTCTGGGTATCCCAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 72 bp | AGACATGCACTGAAGGCTCCTGCCAAAACTCTCCTCTaGACAGGTACACTCTGGCAGACAGAACGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RHALKAPAKTLL*TGTLWQTERLH Trigger: GTGCAGCCGTTCTGTCTGCCAGAGTGTACCTGTTCAGAGGAGAGTTTTGGCAGGAGCCTTCAGTGCATGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 72 bp | TCTCTCAGCTCTGGCAGGTCCTCCAGGGCGCCTAGGTaGATCACAGTGACATTGTTAAAGTTGAGCCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSSGRSSRAPR*ITVTLLKLSQR Trigger: CCTTTGGCTCAACTTTAACAATGTCACTGTGATCCACCTAGGCGCCCTGGAGGACCTGCCAGAGCTGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 72 bp | CATTGTTCCTCAGCAAGGTTGGTCACTGTGAGCCACTaGAGCAAGATGCCATGCACTGTCTGCTTGACCACT | + |
|
Preference number: 6 (lower is better) Translates to: HCSSARLVTVSH*SKMPCTVCLTT Trigger: AGTGGTCAAGCAGACAGTGCATGGCATCTTGCTGCAGTGGCTCACAGTGACCAACCTTGCTGAGGAACAATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | CTCTCCACGTGCTCAGGGGATACTTCCATGCAATGGTaGGTGAGGGACTGGCTTGTGCAAAACATTGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSTCSGDTSMQW*VRDWLVQNIAE Trigger: CTCTGCAATGTTTTGCACAAGCCAGTCCCTCACCAACCATTGCATGGAAGTATCCCCTGAGCACGTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 90 bp | AGCTCTGGCAGGTCCTCCAGGGCGCCTAGGTGGATCACAGTGACATaGTTAAAGTTGAGCCAAAGGTATTCCAAACTGCTCATGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSGRSSRAPRWITVT*LKLSQRYSKLLMLV Trigger: CACCAACATGAGCAGTTTGGAATACCTTTGGCTCAACTTTAACAATGTCACTGTGATCCACCTAGGCGCCCTGGAGGACCTGCCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 72 bp | ACCAGTATGAAAGGGGGACCAACGGACTTGACAAACTaGGCAAGTCCCCTTAATCGGCAGTCGCACAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: TSMKGGPTDLTN*ASPLNRQSHNQ Trigger: TTGGTTGTGCGACTGCCGATTAAGGGGACTTGCTCAGTTTGTCAAGTCCGTTGGTCCCCCTTTCATACTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 72 bp | CAATTGGCGAGGCCAACACATCAAATTCTCTCCACGTaGTCAGGGGATACTTCCATGCAATGGTTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLARPTHQILST*SGDTSMQWLVR Trigger: CCTCACCAACCATTGCATGGAAGTATCCCCTGAGCACGTGGAGAGAATTTGATGTGTTGGCCTCGCCAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | AGGTCCTCCAGGGCGCCTAGGTGGATCACAGTGACATaGTTAAAGTTGAGCCAAAGGTATTCCAAACTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSRAPRWITVT*LKLSQRYSKLL Trigger: GAGCAGTTTGGAATACCTTTGGCTCAACTTTAACAATGTCACTGTGATCCACCTAGGCGCCCTGGAGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 90 bp | GATGGAGTTGAAGGCCATGCAGGTATAATTACCGCCATCTACCAGTaGAGCTGCTGGGATGACAAGCTGAGACAGAATGATACCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DGVEGHAGIITAIYQ*SCWDDKLRQNDTFC Trigger: GCAGAAGGTATCATTCTGTCTCAGCTTGTCATCCCAGCAGCTCAACTGGTAGATGGCGGTAATTATACCTGCATGGCCTTCAACTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 72 bp | GTCACAAAGACCACACACTGGCCCTGGCTTGGAGGCTaGTTCCTCAGGCTGAGACATGCTTTATATTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VTKTTHWPWLGG*FLRLRHALYFV Trigger: TACAAAATATAAAGCATGTCTCAGCCTGAGGAATCAGCCTCCAAGCCAGGGCCAGTGTGTGGTCTTTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 72 bp | GCAATGGTTGGTGAGGGACTGGCTTGTGCAAAACATTaGAGAGTCACGTTCTTTCCTACCTGGATAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: AMVGEGLACAKH*RVTFFPTWIVT Trigger: TGTCACTATCCAGGTAGGAAAGAACGTGACTCTGCAATGTTTTGCACAAGCCAGTCCCTCACCAACCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | GAAGGCCATGCAGGTATAATTACCGCCATCTACCAGTaGAGCTGCTGGGATGACAAGCTGAGACAGAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: EGHAGIITAIYQ*SCWDDKLRQND Trigger: ATCATTCTGTCTCAGCTTGTCATCCCAGCAGCTCAACTGGTAGATGGCGGTAATTATACCTGCATGGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 90 bp | CGACAATACCATATTGGAAAGAAACTCAGCTCCACAACCAAGCTGTaGCCGTTTCTGATAGGCTGGCCAGTTCAAGAAGACACCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RQYHIGKKLSSTTKL*PFLIGWPVQEDTLG Trigger: TCCAAGGGTGTCTTCTTGAACTGGCCAGCCTATCAGAAACGGCAACAGCTTGGTTGTGGAGCTGAGTTTCTTTCCAATATGGTATTGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 72 bp | GATGACAAGCTGAGACAGAATGATACCTTCTGCAATTaGCGAGGCCAACACATCAAATTCTCTCCACGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DDKLRQNDTFCN*RGQHIKFSPRA Trigger: AGCACGTGGAGAGAATTTGATGTGTTGGCCTCGCCAATTGCAGAAGGTATCATTCTGTCTCAGCTTGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | CATATTGGAAAGAAACTCAGCTCCACAACCAAGCTGTaGCCGTTTCTGATAGGCTGGCCAGTTCAAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HIGKKLSSTTKL*PFLIGWPVQED Trigger: GTCTTCTTGAACTGGCCAGCCTATCAGAAACGGCAACAGCTTGGTTGTGGAGCTGAGTTTCTTTCCAATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | GAGAGCTTCATCAGATGTAATATAGAGGGTGAACCATaGTTCCTCAGCAAGGTTGGTCACTGTGAGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ESFIRCNIEGEP*FLSKVGHCEPL Trigger: CAGTGGCTCACAGTGACCAACCTTGCTGAGGAACAATGGTTCACCCTCTATATTACATCTGATGAAGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 72 bp | CCCCTTAATCGGCAGTCGCACAACCAAGGATTATTGTaGAGCGACAATACCATATTGGAAAGAAACTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PLNRQSHNQGLL*SDNTILERNSA Trigger: AGCTGAGTTTCTTTCCAATATGGTATTGTCGCTGCACAATAATCCTTGGTTGTGCGACTGCCGATTAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 72 bp | GTTTCTGATAGGCTGGCCAGTTCAAGAAGACACCCTTaGATACAACTGTCAACCTGTTGGAGGATATGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VSDRLASSRRHP*IQLSTCWRICQ Trigger: TTGACATATCCTCCAACAGGTTGACAGTTGTATCCAAGGGTGTCTTCTTGAACTGGCCAGCCTATCAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 72 bp | TCAACCTGTTGGAGGATATGTCAAGGTATATCAGGTTaGTTAGGAACTGAAGAGCCAGTTCTGGGACAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: STCWRICQGISG*LGTEEPVLGQN Trigger: ATTCTGTCCCAGAACTGGCTCTTCAGTTCCTAACCAACCTGATATACCTTGACATATCCTCCAACAGGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 72 bp | ACAACCAAGGATTATTGTGCAGCGACAATACCATATTaGAAAGAAACTCAGCTCCACAACCAAGCTGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TTKDYCAATIPY*KETQLHNQAVA Trigger: GGCAACAGCTTGGTTGTGGAGCTGAGTTTCTTTCCAATATGGTATTGTCGCTGCACAATAATCCTTGGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | CACAACCAAGGATTATTGTGCAGCGACAATACCATATaGGAAAGAAACTCAGCTCCACAACCAAGCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HNQGLLCSDNTI*ERNSAPQPSCC Trigger: GCAACAGCTTGGTTGTGGAGCTGAGTTTCTTTCCAATATGGTATTGTCGCTGCACAATAATCCTTGGTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | AGTCCCCTTAATCGGCAGTCGCACAACCAAGGATTATaGTGCAGCGACAATACCATATTGGAAAGAAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: SPLNRQSHNQGL*CSDNTILERNS Trigger: TGAGTTTCTTTCCAATATGGTATTGTCGCTGCACAATAATCCTTGGTTGTGCGACTGCCGATTAAGGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 72 bp | TCAAGAAGACACCCTTGGATACAACTGTCAACCTGTTaGAGGATATGTCAAGGTATATCAGGTTGGTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SRRHPWIQLSTC*RICQGISGWLG Trigger: TCCTAACCAACCTGATATACCTTGACATATCCTCCAACAGGTTGACAGTTGTATCCAAGGGTGTCTTCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | TTCAAGAAGACACCCTTGGATACAACTGTCAACCTGTaGGAGGATATGTCAAGGTATATCAGGTTGGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: FKKTPLDTTVNL*EDMSRYIRLVR Trigger: CCTAACCAACCTGATATACCTTGACATATCCTCCAACAGGTTGACAGTTGTATCCAAGGGTGTCTTCTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CCA 72 bp | AATTCTCACTTGCTTGAGTTCTTCGGGAAAGTTGTCTaGAATCTTTCCCAAAGACATAGACATGCACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: NSHLLEFFGKVV*NLSQRHRHALK Trigger: CTTCAGTGCATGTCTATGTCTTTGGGAAAGATTCCAGACAACTTTCCCGAAGAACTCAAGCAAGTGAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 90 bp | CCCTGGGAAAGTTCAAATAAGGGTGAGTTTTCAATTCTCACTTGCTaGAGTTCTTCGGGAAAGTTGTCTGGAATCTTTCCCAAAGACATA | + |
|
Preference number: 6 (lower is better) Translates to: PWESSNKGEFSILTC*SSSGKLSGIFPKDI Trigger: TATGTCTTTGGGAAAGATTCCAGACAACTTTCCCGAAGAACTCAAGCAAGTGAGAATTGAAAACTCACCCTTATTTGAACTTTCCCAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS TCA 72 bp | GTTCAAATAAGGGTGAGTTTTCAATTCTCACTTGCTTaGGTTCTTCGGGAAAGTTGTCTGGAATCTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VQIRVSFQFSLA*VLRESCLESFP Trigger: TGGGAAAGATTCCAGACAACTTTCCCGAAGAACTCAAGCAAGTGAGAATTGAAAACTCACCCTTATTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS CAA 72 bp | TTAAAGTTGAGCCAAAGGTATTCCAAACTGCTCATGTaGGTGAAAAACCCCTGGGAAAGTTCAAATAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LKLSQRYSKLLM*VKNPWESSNKG Trigger: ACCCTTATTTGAACTTTCCCAGGGGTTTTTCACCAACATGAGCAGTTTGGAATACCTTTGGCTCAACTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||
| CDS GCA 72 bp | GAAAGTTCAAATAAGGGTGAGTTTTCAATTCTCACTTaGTTGAGTTCTTCGGGAAAGTTGTCTGGAATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ESSNKGEFSILT*LSSSGKLSGIF Trigger: AAAGATTCCAGACAACTTTCCCGAAGAACTCAAGCAAGTGAGAATTGAAAACTCACCCTTATTTGAACTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057176.5 |
||