Pregenerated sensors for LRIT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041044Ensembl transcript IDs: ENSMUST00000120052.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTATGCCATAGGCGAAACTCAGCAAGAATTCTCCTGCTACTCGCATaGTGGGTGACCAGAAAAGCTCCTACATACTCTCCAAAACCAAGA | + |
|
Preference number: 1 (lower is better) Translates to: LCHRRNSARILLLLA*WVTRKAPTYSPKPR Trigger: TCTTGGTTTTGGAGAGTATGTAGGAGCTTTTCTGGTCACCCACCATGCGAGTAGCAGGAGAATTCTTGCTGAGTTTCGCCTATGGCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 90 bp | AGCAACAGCAACATGCCAGTCTCACATGAAGACATTCAGAGGTGTTaGATGGTTTTGCTCTTCCCTCTTATGGCATCTGAGAAAAGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: SNSNMPVSHEDIQRC*MVLLFPLMASEKSL Trigger: CAGACTTTTCTCAGATGCCATAAGAGGGAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATGTGAGACTGGCATGTTGCTGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 90 bp | GGAGGTGACAGAAAAATATCAAGTTTGGTGACTCTAATGTCCGTGTaGACCTGTGTTCTTGTGGTTCTAATTCCAGGTTTCGGTGACTAC | + |
|
Preference number: 1 (lower is better) Translates to: GGDRKISSLVTLMSV*TCVLVVLIPGFGDY Trigger: GTAGTCACCGAAACCTGGAATTAGAACCACAAGAACACAGGTGCACACGGACATTAGAGTCACCAAACTTGATATTTTTCTGTCACCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 90 bp | CAAACAATAAACAGAGTTTTCAGTAGGAACGTTCACTCACTCCTGTaGACAAGCATCTCAGCAATCTATGCCATAGGCGAAACTCAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: QTINRVFSRNVHSLL*TSISAIYAIGETQQ Trigger: TTGCTGAGTTTCGCCTATGGCATAGATTGCTGAGATGCTTGTGCACAGGAGTGAGTGAACGTTCCTACTGAAAACTCTGTTTATTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR TCA 90 bp | AGAAAACTCAGGGAAGACAGAACACAGGTAGGAAAGTTGATACATTaGGATCAAGAATCTGGACATCTTAGAGGCAATGATCACCCACAC | + |
|
Preference number: 1 (lower is better) Translates to: RKLREDRTQVGKLIH*DQESGHLRGNDHPH Trigger: GTGTGGGTGATCATTGCCTCTAAGATGTCCAGATTCTTGATCTCAATGTATCAACTTTCCTACCTGTGTTCTGTCTTCCCTGAGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR TCA 90 bp | TGCATACCAGAGAGTTTTTGCTTTCATTTGTTAGACAGCAGAAACTaGCCGATACAAGCTAAATACTCAACACCTGTTTCTTCTCCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: CIPESFCFHLLDSRN*PIQAKYSTPVSSPG Trigger: TCCAGGAGAAGAAACAGGTGTTGAGTATTTAGCTTGTATCGGTCAGTTTCTGCTGTCTAACAAATGAAAGCAAAAACTCTCTGGTATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 90 bp | TTTACATCTAGTCAATATTCACATGATATCAATTATCTTGAGTGGTaGTGGTTAAATACTTTCCTCGGATCACTTCTGACTGTGGAAGTC | + |
|
Preference number: 1 (lower is better) Translates to: FTSSQYSHDINYLEW*WLNTFLGSLLTVEV Trigger: GACTTCCACAGTCAGAAGTGATCCGAGGAAAGTATTTAACCAGCACCACTCAAGATAATTGATATCATGTGAATATTGACTAGATGTAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CCA 90 bp | GGATTTACATCTAGTCAATATTCACATGATATCAATTATCTTGAGTaGTGCTGGTTAAATACTTTCCTCGGATCACTTCTGACTGTGGAA | + |
|
Preference number: 1 (lower is better) Translates to: GFTSSQYSHDINYLE*CWLNTFLGSLLTVE Trigger: TTCCACAGTCAGAAGTGATCCGAGGAAAGTATTTAACCAGCACCACTCAAGATAATTGATATCATGTGAATATTGACTAGATGTAAATCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGGACATCTTAGAGGCAATGATCACCCACACCCTGAAGGCAGCCCTCCTAGACTCCTCGGATCACTTCTaGCTGTGGAAGTCCACAATT | + |
|
Preference number: 2 (lower is better) Translates to: LDILEAMITHTLKAALLDSSDHF*LWKSTI Trigger: AATTGTGGACTTCCACAGTCAGAAGTGATCCGAGGA...GTCTAGGAGGGCTGCCTTCAGGGTGTGGGTGATCATTGCCTCTAAGATGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR TCA 90 bp | CATAGGCGAAACTCAGCAAGAATTCTCCTGCTACTCGCATGGTGGGTGACCAGACATGCCAGTCTCACATaGAGACATTCAGAGGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: HRRNSARILLLLAWWVTRHASLT*RHSEVL Trigger: CAACACCTCTGAATGTCTTCATGTGAGACTGGCATG...TCTGGTCACCCACCATGCGAGTAGCAGGAGAATTCTTGCTGAGTTTCGCCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGACATGAGCAACAGCAACATGCCAGTCTCACATGAAGACATTCAGAGGTGTCCCTCTTATGGCATCTaGGAAAAGTCTGCCCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: MDMSNSNMPVSHEDIQRCPSYGI*EKSAPS Trigger: ACTTGGGGCAGACTTTTCTCAGATGCCATAAGAGGG...ACACCTCTGAATGTCTTCATGTGAGACTGGCATGTTGCTGTTGCTCATGTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR GCA 90 bp | CATAGGCGAAACTCAGCAAGAATTCTCCTGCTACTCGCATGGTGGGTGACCAGAATTAGTGTCTCTGCTTaGCTCGTTAACATTGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: HRRNSARILLLLAWWVTRISVSA*LVNIAF Trigger: AAAGGCAATGTTAACGAGGCAAGCAGAGACACTAAT...TCTGGTCACCCACCATGCGAGTAGCAGGAGAATTCTTGCTGAGTTTCGCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGACATCTTAGAGGCAATGATCACCCACACCCTGAAGGCAGCCCTCCTAGACTATGTGTGCATGAACTaGTATAAGTGCAAACATGAT | + |
|
Preference number: 2 (lower is better) Translates to: LDILEAMITHTLKAALLDYVCMN*YKCKHD Trigger: ATCATGTTTGCACTTATACCAGTTCATGCACACATA...GTCTAGGAGGGCTGCCTTCAGGGTGTGGGTGATCATTGCCTCTAAGATGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CAA 90 bp | AACATGCCAGTCTCACATGAAGACATTCAGAGGTGTTGCATGGTTTaGCTCTTCCCTCTTATGGCATCTGAGAAAAGTCTGCCCCAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: NMPVSHEDIQRCCMV*LFPLMASEKSLPQV Trigger: TACTTGGGGCAGACTTTTCTCAGATGCCATAAGAGGGAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATGTGAGACTGGCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CAA 90 bp | AGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTAGGCTGCCATaGTCCAGTGGCAGTACTATAAGTGGGCCATGTAGTAAATTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SRTNCPTAWSKARLP*SSGSTISGPCSKFV Trigger: AACAAATTTACTACATGGCCCACTTATAGTACTGCCACTGGACAATGGCAGCCTAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCCATTGTCCAGTGGCAGTACTATAAGTGGGCCATGTAGTAAATTTGTTCCGCTGGCACACAGTAAGTaGTTAAAACCCTGTGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: LPLSSGSTISGPCSKFVPLAHSK*LKPCVN Trigger: GTTAACACAGGGTTTTAAGCACTTACTGTGTGCCAG...CGGAACAAATTTACTACATGGCCCACTTATAGTACTGCCACTGGACAATGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGAGGAGTTTGTTTTAGTAACATAAATACCCACAAGAACACTCCAGAAGACGCTGCCATTGTCCAGTaGCAGTACTATAAGTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: VRGVCFSNINTHKNTPEDAAIVQ*QYYKWA Trigger: GGCCCACTTATAGTACTGCCACTGGACAATGGCAGC...GTCTTCTGGAGTGTTCTTGTGGGTATTTATGTTACTAAAACAAACTCCTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTCCGAAAATGTTTTGTCTTCCATCGTTGTCTTCAGAGGATTAGTGTCTCTCATTGCCTTTGGCCATaGGACTGTCTTTGGCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LFRKCFVFHRCLQRISVSHCLWP*DCLWQV Trigger: TACCTGCCAAAGACAGTCTCATGGCCAAAGGCAATG...AGAGACACTAATCCTCTGAAGACAACGATGGAAGACAAAACATTTTCGGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAAAACTTGTCAAAGACATGGATTCCAAAGAAAATTCATTTCTCCTGTCTGCATCCAAACAATCAGGGTaGCTGAGCACACAGTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: QKLVKDMDSKENSFLLSASKQSG*LSTQSG Trigger: ACCTGACTGTGTGCTCAGTCACCCTGATTGTTTGGA...TGCAGACAGGAGAAATGAATTTTCTTTGGAATCCATGTCTTTGACAAGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCCATTGTCCAGTGGCAGTACTATAAGTGGGCCATGTAGTAAATTTGTTCCGATACCAGAGAGTTTTTaGTTTCATTTGTTAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: LPLSSGSTISGPCSKFVPIPESF*FHLLDS Trigger: GCTGTCTAACAAATGAAAGCAAAAACTCTCTGGTAT...CGGAACAAATTTACTACATGGCCCACTTATAGTACTGCCACTGGACAATGGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAACTTGTCAAAGACATGGATTCCAAAGAAAATTCATTTCTCCTGTCTGCAAATTGTCCAACTGCCTaGTCCAAAGCTAGGCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: QKLVKDMDSKENSFLLSANCPTA*SKARLP Trigger: TGGCAGCCTAGCTTTGGACCAGGCAGTTGGACAATT...TGCAGACAGGAGAAATGAATTTTCTTTGGAATCCATGTCTTTGACAAGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCTGTTTTTGTAAACATTTTATTGGATCACATCCATGCCCATTAACTCACCTGGGTGTTGCATGGTTTTaGTCTTCCCTCTTATGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: ICFCKHFIGSHPCPLTHLGVAWF*SSLLWH Trigger: ATGCCATAAGAGGGAAGAGCAAAACCATGCAACACC...CAGGTGAGTTAATGGGCATGGATGTGATCCAATAAAATGTTTACAAAAACAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CCA 72 bp | AGGCGAAACTCAGCAAGAATTCTCCTGCTACTCGCATaGTGGGTGACCAGAAAAGCTCCTACATACTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RRNSARILLLLA*WVTRKAPTYSP Trigger: TGGAGAGTATGTAGGAGCTTTTCTGGTCACCCACCATGCGAGTAGCAGGAGAATTCTTGCTGAGTTTCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCTTCAGTTGTAGAAACCCCTTGGCTCTCTCCAGTCTGGCATACTGAGAATTCGTTAACATTGCCTTaGGCCATGAGACTGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VPSVVETPWLSPVWHTENSLTLP*AMRLSL Trigger: CAAAGACAGTCTCATGGCCAAAGGCAATGTTAACGA...ATTCTCAGTATGCCAGACTGGAGAGAGCCAAGGGGTTTCTACAACTGAAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 72 bp | TTCCATCGTTGTCTTCAGAGGATTAGTGTCTCTGCTTaGCTCGTTAACATTGCCTTTGGCCATGAGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FHRCLQRISVSA*LVNIAFGHETV Trigger: GACAGTCTCATGGCCAAAGGCAATGTTAACGAGGCAAGCAGAGACACTAATCCTCTGAAGACAACGATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 72 bp | TCACTCACTCCTGTGCACAAGCATCTCAGCAATCTATaGCATAGGCGAAACTCAGCAAGAATTCTCCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLTPVHKHLSNL*HRRNSARILLL Trigger: TAGCAGGAGAATTCTTGCTGAGTTTCGCCTATGGCATAGATTGCTGAGATGCTTGTGCACAGGAGTGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CCA 72 bp | CGAAACTCAGCAAGAATTCTCCTGCTACTCGCATGGTaGGTGACCAGAAAAGCTCCTACATACTCTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RNSARILLLLAW*VTRKAPTYSPK Trigger: TTTTGGAGAGTATGTAGGAGCTTTTCTGGTCACCCACCATGCGAGTAGCAGGAGAATTCTTGCTGAGTTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 72 bp | AACAGAGTTTTCAGTAGGAACGTTCACTCACTCCTGTaGACAAGCATCTCAGCAATCTATGCCATAGGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: NRVFSRNVHSLL*TSISAIYAIGE Trigger: TTCGCCTATGGCATAGATTGCTGAGATGCTTGTGCACAGGAGTGAGTGAACGTTCCTACTGAAAACTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CCA 72 bp | CCTTCAGTTGTAGAAACCCCTTGGCTCTCTCCAGTCTaGCATACTGAGAATAAAAGAGCAGCAGTCTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSVVETPWLSPV*HTENKRAAVFR Trigger: TCTAAAGACTGCTGCTCTTTTATTCTCAGTATGCCAGACTGGAGAGAGCCAAGGGGTTTCTACAACTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CCA 72 bp | CTGACTATGATGGTGCCTTCAGTTGTAGAAACCCCTTaGCTCTCTCCAGTCTGGCATACTGAGAATAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTMMVPSVVETP*LSPVWHTENKR Trigger: TCTTTTATTCTCAGTATGCCAGACTGGAGAGAGCCAAGGGGTTTCTACAACTGAAGGCACCATCATAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 72 bp | TCTCACATGAAGACATTCAGAGGTGTTGCATGGTTTTaGTCTTCCCTCTTATGGCATCTGAGAAAAGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SHMKTFRGVAWF*SSLLWHLRKVC Trigger: GCAGACTTTTCTCAGATGCCATAAGAGGGAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGAGGAGTTTGTTTTAGTAACATAAATACCCACAAGAACACTCCAGAAGACAGACATTCAGAGGTGTaGCATGGTTTTGCTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VRGVCFSNINTHKNTPEDRHSEV*HGFALP Trigger: GGGAAGAGCAAAACCATGCAACACCTCTGAATGTCT...GTCTTCTGGAGTGTTCTTGTGGGTATTTATGTTACTAAAACAAACTCCTCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGAGGAGTTTGTTTTAGTAACATAAATACCCACAAGAACACTCCAGAAGACGCCATGAGACTGTCTTaGGCAGGTACAATATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: VRGVCFSNINTHKNTPEDAMRLS*AGTIWT Trigger: TGTCCATATTGTACCTGCCAAAGACAGTCTCATGGC...GTCTTCTGGAGTGTTCTTGTGGGTATTTATGTTACTAAAACAAACTCCTCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGTAAAGACTTTTCAGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTATGTTCCGAAAATGTTTaGTCTTCCATCGTTGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VGKDFSVEPIVQLPGPKLCSENV*SSIVVF Trigger: GAAGACAACGATGGAAGACAAAACATTTTCGGAACA...TAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACTGAAAAGTCTTTACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGAGGAGTTTGTTTTAGTAACATAAATACCCACAAGAACACTCCAGAAGACTTGTTACCAAAGGACTaGCTACCCATCTTCTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VRGVCFSNINTHKNTPEDLLPKD*LPIFSV Trigger: TACTGAGAAGATGGGTAGCAAGTCCTTTGGTAACAA...GTCTTCTGGAGTGTTCTTGTGGGTATTTATGTTACTAAAACAAACTCCTCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 72 bp | AGAAAAATATCAAGTTTGGTGACTCTAATGTCCGTGTaGACCTGTGTTCTTGTGGTTCTAATTCCAGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RKISSLVTLMSV*TCVLVVLIPGF Trigger: GAAACCTGGAATTAGAACCACAAGAACACAGGTGCACACGGACATTAGAGTCACCAAACTTGATATTTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR TCA 72 bp | AAATGGACAAGTTACCAAATATCCAAACAATCAGGGTaGCTGAGCACACAGTCAGGTATAAAAGTAAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KWTSYQISKQSG*LSTQSGIKVSV Trigger: TACACTTACTTTTATACCTGACTGTGTGCTCAGTCACCCTGATTGTTTGGATATTTGGTAACTTGTCCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR TCA 72 bp | GAGAGTTTTTGCTTTCATTTGTTAGACAGCAGAAACTaGCCGATACAAGCTAAATACTCAACACCTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ESFCFHLLDSRN*PIQAKYSTPVS Trigger: AGAAACAGGTGTTGAGTATTTAGCTTGTATCGGTCAGTTTCTGCTGTCTAACAAATGAAAGCAAAAACTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGTTTTTGTAAACATTTTATTGGATCACATCCATGCCCATTAACTCACCTGATAGCATCCAAAAACTaGTCAAAGACATGGATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ICFCKHFIGSHPCPLTHLIASKN*SKTWIP Trigger: TGGAATCCATGTCTTTGACAAGTTTTTGGATGCTAT...CAGGTGAGTTAATGGGCATGGATGTGATCCAATAAAATGTTTACAAAAACAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR GCA 72 bp | AGTCAATATTCACATGATATCAATTATCTTGAGTGGTaGTGGTTAAATACTTTCCTCGGATCACTTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: SQYSHDINYLEW*WLNTFLGSLLT Trigger: AGTCAGAAGTGATCCGAGGAAAGTATTTAACCAGCACCACTCAAGATAATTGATATCATGTGAATATTGACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CCA 72 bp | TCTAGTCAATATTCACATGATATCAATTATCTTGAGTaGTGCTGGTTAAATACTTTCCTCGGATCACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSQYSHDINYLE*CWLNTFLGSLL Trigger: CAGAAGTGATCCGAGGAAAGTATTTAACCAGCACCACTCAAGATAATTGATATCATGTGAATATTGACTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | CTGGACATCTTAGAGGCAATGATCACCCACACCCTGAAGGCAGCCCTCCTAGACAGGTCGAGAGGCGATTaGCCTGCAGGTCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDILEAMITHTLKAALLDRSRGD*PAGPAA Trigger: AGCTGCTGGACCTGCAGGCCAATCGCCTCTCGACCT...GTCTAGGAGGGCTGCCTTCAGGGTGTGGGTGATCATTGCCTCTAAGATGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | ATGGACATGAGCAACAGCAACATGCCAGTCTCACATGAAGACATTCAGAGGTGTCAGCCCAGGGGAACGTaGCCAGGCGGTTCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MDMSNSNMPVSHEDIQRCQPRGT*PGGSQA Trigger: TGCCTGGGAACCGCCTGGTCACGTTCCCCTGGGCTG...ACACCTCTGAATGTCTTCATGTGAGACTGGCATGTTGCTGTTGCTCATGTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCTTCAGTTGTAGAAACCCCTTGGCTCTCTCCAGTCTGGCATACTGAGAATTTAGCTCCAGCTGGCTaGAGGCCACTCCAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSVVETPWLSPVWHTENLAPAG*RPLQPG Trigger: GCCTGGCTGGAGTGGCCTTCAGCCAGCTGGAGCTAA...ATTCTCAGTATGCCAGACTGGAGAGAGCCAAGGGGTTTCTACAACTGAAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | ATGGACATGAGCAACAGCAACATGCCAGTCTCACATGAAGACATTCAGAGGTGTGGCCCCAGAGGCCTCTaGAGAACCCCCAGTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MDMSNSNMPVSHEDIQRCGPRGL*RTPSAA Trigger: TGCCGCACTGGGGGTTCTGCAGAGGCCTCTGGGGCC...ACACCTCTGAATGTCTTCATGTGAGACTGGCATGTTGCTGTTGCTCATGTCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAATCTGGACATCTTAGAGGCAATGATCACCCACACCCTGAAGGCAGCCCTGCCTATCTCCCTCACTaGGGCTGCTCCTGGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QESGHLRGNDHPHPEGSPAYLPH*GCSWTE Trigger: TTCTGTCCAGGAGCAGCCTCAGTGAGGGAGATAGGC...AGGGCTGCCTTCAGGGTGTGGGTGATCATTGCCTCTAAGATGTCCAGATTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAATCTGGACATCTTAGAGGCAATGATCACCCACACCCTGAAGGCAGCCCTTACCCAAAGGGGATATaGTGCTGGTCACCCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QESGHLRGNDHPHPEGSPYPKGI*CWSPLD Trigger: GTCCAGGGGTGACCAGCATCATATCCCCTTTGGGTA...AGGGCTGCCTTCAGGGTGTGGGTGATCATTGCCTCTAAGATGTCCAGATTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCATTGTCCAGTGGCAGTACTATAAGTGGGCCATGTAGTAAATTTGTTCCGTCCAGCAGCTGCAGCTaGGGAGTGTCCCTCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSSGSTISGPCSKFVPSSSCS*GVSLSA Trigger: TGCGCTGAGGGACACTCCGCAGCTGCAGCTGCTGGA...CGGAACAAATTTACTACATGGCCCACTTATAGTACTGCCACTGGACAATGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGTAAAGACTTTTCAGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTATGCGTCTGCCGCCCCTaGCACCCAAGACCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGKDFSVEPIVQLPGPKLCVCRP*HPRPGS Trigger: ACTCCCAGGTCTTGGGTGTCAGGGGCGGCAGACGCA...TAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACTGAAAAGTCTTTACCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | CATAGGCGAAACTCAGCAAGAATTCTCCTGCTACTCGCATGGTGGGTGACCAGAGGAAGCCTCATCAGCTaGTTATTGGACAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRNSARILLLLAWWVTRGSLIS*LLDRSR Trigger: CCTGGACCTGTCCAATAACCAGCTGATGAGGCTTCC...TCTGGTCACCCACCATGCGAGTAGCAGGAGAATTCTTGCTGAGTTTCGCCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | ACAATCAGGGTGACTGAGCACACAGTCAGGTATAAAAGTAAGTGTATGAGACTGGAGAGGCGATTGGCCTaGAGGTCCAGCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TIRVTEHTVRYKSKCMRLERRLA*RSSSCS Trigger: GCTGCAGCTGCTGGACCTGCAGGCCAATCGCCTCTC...CAGTCTCATACACTTACTTTTATACCTGACTGTGTGCTCAGTCACCCTGATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | ATGGACATGAGCAACAGCAACATGCCAGTCTCACATGAAGACATTCAGAGGTGTGTTGTGTTCCCAGCTTaGGGGGCCTTCCACACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MDMSNSNMPVSHEDIQRCVVFPA*GAFHTK Trigger: TTTGGTGTGGAAGGCCCCTCAAGCTGGGAACACAAC...ACACCTCTGAATGTCTTCATGTGAGACTGGCATGTTGCTGTTGCTCATGTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | ACAATCAGGGTGACTGAGCACACAGTCAGGTATAAAAGTAAGTGTATGAGACTGCAGGCTGGAACGGGCTaGGAGAAGCCTATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIRVTEHTVRYKSKCMRLQAGTG*EKPISL Trigger: GAGGGAGATAGGCTTCTCTCAGCCCGTTCCAGCCTG...CAGTCTCATACACTTACTTTTATACCTGACTGTGTGCTCAGTCACCCTGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | CATGAAGACATTCAGAGGTGTTGCATGGTTTTGCTCTTCCCTCTTATGGCATCTTCCAGCCAGGCTGCGTaGACTGGCACATCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HEDIQRCCMVLLFPLMASSSQAA*TGTSQS Trigger: AGACTGAGATGTGCCAGTCCACGCAGCCTGGCTGGA...AGATGCCATAAGAGGGAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGTAAAGACTTTTCAGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTACTGACACCCAAGACCTaGGAGTCCAGGCTGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: VGKDFSVEPIVQLPGPKLLTPKT*ESRLER Trigger: CCGTTCCAGCCTGGACTCCCAGGTCTTGGGTGTCAG...TAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACTGAAAAGTCTTTACCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CAA 72 bp | AATTGTCCAACTGCCTGGTCCAAAGCTAGGCTGCCATaGTCCAGTGGCAGTACTATAAGTGGGCCATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NCPTAWSKARLP*SSGSTISGPCS Trigger: ACTACATGGCCCACTTATAGTACTGCCACTGGACAATGGCAGCCTAGCTTTGGACCAGGCAGTTGGACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTTTTTGTAAACATTTTATTGGATCACATCCATGCCCATTAACTCACCTGAAGCCCCAGGCCTGGTaGGGTCCCCCAAGTGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICFCKHFIGSHPCPLTHLKPQAW*GPPSAR Trigger: CCTCGCACTTGGGGGACCTCACCAGGCCTGGGGCTT...CAGGTGAGTTAATGGGCATGGATGTGATCCAATAAAATGTTTACAAAAACAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | CATGAAGACATTCAGAGGTGTTGCATGGTTTTGCTCTTCCCTCTTATGGCATCTTGCCTCCTGGTGTTCTaGTGGCTCTCTGGAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HEDIQRCCMVLLFPLMASCLLVF*WLSGEL Trigger: GAGTTCTCCAGAGAGCCATCAGAACACCAGGAGGCA...AGATGCCATAAGAGGGAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGAGGAGTTTGTTTTAGTAACATAAATACCCACAAGAACACTCCAGAAGACGTGAGGTCCCCCAAGTaGGAGGAGCCAGAGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRGVCFSNINTHKNTPEDVRSPK*EEPEHA Trigger: GGCATGCTCTGGCTCCTCGCACTTGGGGGACCTCAC...GTCTTCTGGAGTGTTCTTGTGGGTATTTATGTTACTAAAACAAACTCCTCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCATTGTCCAGTGGCAGTACTATAAGTGGGCCATGTAGTAAATTTGTTCCGTCAGGATGCGCAGACTaGAGCTGCATTCAGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSSGSTISGPCSKFVPSGCAD*SCIQKD Trigger: GTCCTTCTGAATGCAGCTGCAGTCTGCGCATCCTGA...CGGAACAAATTTACTACATGGCCCACTTATAGTACTGCCACTGGACAATGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | ATGGACATGAGCAACAGCAACATGCCAGTCTCACATGAAGACATTCAGAGGTGTCTCCCAGGAAGTTCTTaGCTTGGCAGATGTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MDMSNSNMPVSHEDIQRCLPGSS*LGRCSP Trigger: GGGACTACATCTGCCAAGCCAAGAACTTCCTGGGAG...ACACCTCTGAATGTCTTCATGTGAGACTGGCATGTTGCTGTTGCTCATGTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGTAAAGACTTTTCAGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTACCTGGGACATCCATCTaGAAGTTCTGGAGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGKDFSVEPIVQLPGPKLPGTSI*KFWRAS Trigger: GCTGGCTCTCCAGAACTTTCAGATGGATGTCCCAGG...TAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACTGAAAAGTCTTTACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | ACAATCAGGGTGACTGAGCACACAGTCAGGTATAAAAGTAAGTGTATGAGACTGTTTCTTAGCTCCAGCTaGCTGAAGGCCACTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIRVTEHTVRYKSKCMRLFLSSS*LKATPA Trigger: GGCTGGAGTGGCCTTCAGCCAGCTGGAGCTAAGAAA...CAGTCTCATACACTTACTTTTATACCTGACTGTGTGCTCAGTCACCCTGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCCGAAAATGTTTTGTCTTCCATCGTTGTCTTCAGAGGATTAGTGTCTCTCGGAGCTCTGGGCTCTaGCACTTTCTTAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFRKCFVFHRCLQRISVSRSSGL*HFLSSS Trigger: GCTGGAGCTAAGAAAGTGTCAGAGCCCAGAGCTCCG...AGAGACACTAATCCTCTGAAGACAACGATGGAAGACAAAACATTTTCGGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGTAAAGACTTTTCAGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTATGCGCAGACTGCAGCTaGATTCAGAAGGACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGKDFSVEPIVQLPGPKLCADCS*IQKDRS Trigger: GCTTCTGTCCTTCTGAATGCAGCTGCAGTCTGCGCA...TAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACTGAAAAGTCTTTACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTTTTTGTAAACATTTTATTGGATCACATCCATGCCCATTAACTCACCTGGATGCTGGTCACCCCTaGACGGAGCTCTGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICFCKHFIGSHPCPLTHLDAGHP*TELWAL Trigger: CAGAGCCCAGAGCTCCGTCCAGGGGTGACCAGCATC...CAGGTGAGTTAATGGGCATGGATGTGATCCAATAAAATGTTTACAAAAACAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | ATGGACATGAGCAACAGCAACATGCCAGTCTCACATGAAGACATTCAGAGGTGTTCCGGTAGAAGTCTGTaGCTCAGTGACAATCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MDMSNSNMPVSHEDIQRCSGRSL*LSDNQG Trigger: TCCTTGATTGTCACTGAGCCACAGACTTCTACCGGA...ACACCTCTGAATGTCTTCATGTGAGACTGGCATGTTGCTGTTGCTCATGTCCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CAA 72 bp | GGATTAGTGTCTCTGCTTGCCTCGTTAACATTGCCTTaGGCCATGAGACTGTCTTTGGCAGGTACAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVSLLASLTLP*AMRLSLAGTIW Trigger: CCATATTGTACCTGCCAAAGACAGTCTCATGGCCAAAGGCAATGTTAACGAGGCAAGCAGAGACACTAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CAA 72 bp | TTCAGAGGATTAGTGTCTCTGCTTGCCTCGTTAACATaGCCTTTGGCCATGAGACTGTCTTTGGCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: FRGLVSLLASLT*PLAMRLSLAGT Trigger: TGTACCTGCCAAAGACAGTCTCATGGCCAAAGGCAATGTTAACGAGGCAAGCAGAGACACTAATCCTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAACTTGTCAAAGACATGGATTCCAAAGAAAATTCATTTCTCCTGTCTGCAGTAGGCAGCAGCTTCTaGCCCCTCCCCTGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLVKDMDSKENSFLLSAVGSSF*PLPCSC Trigger: GCAAGAACAGGGGAGGGGGCAGAAGCTGCTGCCTAC...TGCAGACAGGAGAAATGAATTTTCTTTGGAATCCATGTCTTTGACAAGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | AACATGCCAGTCTCACATGAAGACATTCAGAGGTGTTGCATGGTTTTGCTCTTCTCACTGGAGACTTCCTaGTGTACTGTGCCATTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NMPVSHEDIQRCCMVLLFSLETS*CTVPLS Trigger: ACTCAATGGCACAGTACACCAGGAAGTCTCCAGTGA...GAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATGTGAGACTGGCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | CATGAAGACATTCAGAGGTGTTGCATGGTTTTGCTCTTCCCTCTTATGGCATCTTATGAGGAACATGCCTaGCCACCAGCTTGTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HEDIQRCCMVLLFPLMASYEEHA*PPACCC Trigger: ACAACAACAAGCTGGTGGCCAGGCATGTTCCTCATA...AGATGCCATAAGAGGGAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGTAAAGACTTTTCAGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTAGTTCTGATGGCTCTCTaGAGAACTCTCCTGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VGKDFSVEPIVQLPGPKLVLMAL*RTLLGH Trigger: ATGTCCCAGGAGAGTTCTCCAGAGAGCCATCAGAAC...TAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACTGAAAAGTCTTTACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | CATGAAGACATTCAGAGGTGTTGCATGGTTTTGCTCTTCCCTCTTATGGCATCTCACATGCCACATACTTaGTCTTTGGAGCAAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HEDIQRCCMVLLFPLMASHMPHT*SLEQVP Trigger: AGGGACTTGCTCCAAAGACCAAGTATGTGGCATGTG...AGATGCCATAAGAGGGAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTTTTTGTAAACATTTTATTGGATCACATCCATGCCCATTAACTCACCTGGGTGTACTGTGCCATTaGGTGGTCGTCCATTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ICFCKHFIGSHPCPLTHLGVLCH*VVVHWP Trigger: GGGCCAATGGACGACCACTCAATGGCACAGTACACC...CAGGTGAGTTAATGGGCATGGATGTGATCCAATAAAATGTTTACAAAAACAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAACTTGTCAAAGACATGGATTCCAAAGAAAATTCATTTCTCCTGTCTGCACTTTATGCTGGGCATTaGGGGCTTGGTAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLVKDMDSKENSFLLSALYAGH*GLGSQG Trigger: GCCCTGGCTACCAAGCCCTCAATGCCCAGCATAAAG...TGCAGACAGGAGAAATGAATTTTCTTTGGAATCCATGTCTTTGACAAGTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAACTTGTCAAAGACATGGATTCCAAAGAAAATTCATTTCTCCTGTCTGCATCAAGTCAGGGTCGCTaGACACCACTGTCCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKLVKDMDSKENSFLLSASSQGR*TPLSWP Trigger: AGGCCAGGACAGTGGTGTGCAGCGACCCTGACTTGA...TGCAGACAGGAGAAATGAATTTTCTTTGGAATCCATGTCTTTGACAAGTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAACTTGTCAAAGACATGGATTCCAAAGAAAATTCATTTCTCCTGTCTGCAGTTCTCCAGGAAGTGTaGAGCCTCGGGTGGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLVKDMDSKENSFLLSAVLQEV*SLGWQG Trigger: ACCTTGCCACCCGAGGCTGCACACTTCCTGGAGAAC...TGCAGACAGGAGAAATGAATTTTCTTTGGAATCCATGTCTTTGACAAGTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | AACATGCCAGTCTCACATGAAGACATTCAGAGGTGTTGCATGGTTTTGCTCTTCCACATACTTGGTCTTTaGAGCAAGTCCCTCGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: NMPVSHEDIQRCCMVLLFHILGL*SKSLDS Trigger: ACTATCGAGGGACTTGCTCCAAAGACCAAGTATGTG...GAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATGTGAGACTGGCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CAA 72 bp | GTCTCACATGAAGACATTCAGAGGTGTTGCATGGTTTaGCTCTTCCCTCTTATGGCATCTGAGAAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSHEDIQRCCMV*LFPLMASEKSL Trigger: CAGACTTTTCTCAGATGCCATAAGAGGGAAGAGCAAAACCATGCAACACCTCTGAATGTCTTCATGTGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| 3UTR CAA 72 bp | TTTCCTCGGATCACTTCTGACTGTGGAAGTCCACAATaGTTACCAAAGGACTTGCTACCCATCTTCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FPRITSDCGSPQ*LPKDLLPIFSV Trigger: TACTGAGAAGATGGGTAGCAAGTCCTTTGGTAACAATTGTGGACTTCCACAGTCAGAAGTGATCCGAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGAGGAGTTTGTTTTAGTAACATAAATACCCACAAGAACACTCCAGAAGACAACTTGAGCCGTCACTaGAGACTTCCTGGTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VRGVCFSNINTHKNTPEDNLSRH*RLPGVL Trigger: CAGTACACCAGGAAGTCTCCAGTGACGGCTCAAGTT...GTCTTCTGGAGTGTTCTTGTGGGTATTTATGTTACTAAAACAAACTCCTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCGAAAATGTTTTGTCTTCCATCGTTGTCTTCAGAGGATTAGTGTCTCTGAGAAGATGACACATTaGTCCTTCGTAGGCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFRKCFVFHRCLQRISVSEKMTH*SFVGTK Trigger: CTTGGTGCCTACGAAGGAGCAATGTGTCATCTTCTC...AGAGACACTAATCCTCTGAAGACAACGATGGAAGACAAAACATTTTCGGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTTGTCAAAGACATGGATTCCAAAGAAAATTCATTTCTCCTGTCTGCAACCATCTGTGCCTCCTaGTGTTCTGATGGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKLVKDMDSKENSFLLSATICAS*CSDGSL Trigger: CAGAGAGCCATCAGAACACCAGGAGGCACAGATGGT...TGCAGACAGGAGAAATGAATTTTCTTTGGAATCCATGTCTTTGACAAGTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTTTTTGTAAACATTTTATTGGATCACATCCATGCCCATTAACTCACCTGAAGTCTGTGGCTCAGTaGCAATCAAGGAGATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ICFCKHFIGSHPCPLTHLKSVAQ*QSRRSG Trigger: CCCTGATCTCCTTGATTGTCACTGAGCCACAGACTT...CAGGTGAGTTAATGGGCATGGATGTGATCCAATAAAATGTTTACAAAAACAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGTTTTTGTAAACATTTTATTGGATCACATCCATGCCCATTAACTCACCTGTCGATGCCCAAAGACTaGATAAAGGACACTAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICFCKHFIGSHPCPLTHLSMPKD*IKDTKG Trigger: GCCTTTAGTGTCCTTTATGCAGTCTTTGGGCATCGA...CAGGTGAGTTAATGGGCATGGATGTGATCCAATAAAATGTTTACAAAAACAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 90 bp | GCAGCTGCAGCTGCGGAGTGTCCCTCAGCGCAGCCCAGGGGAACGTaGCCAGGCGGTTCCCAGGCAGCCGCAGCTCTCGTAGGCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAECPSAQPRGT*PGGSQAAAALVGVS Trigger: TGAGACGCCTACGAGAGCTGCGGCTGCCTGGGAACCGCCTGGTCACGTTCCCCTGGGCTGCGCTGAGGGACACTCCGCAGCTGCAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | TCGGGTGGCAAGGTCGAGAGGCGATTGGCCTGCAGGTCCAGCAGCTaGAGCTGCGGAGTGTCCCTCAGCGCAGCCCAGGGGAACGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SGGKVERRLACRSSS*SCGVSLSAAQGNVT Trigger: GGTCACGTTCCCCTGGGCTGCGCTGAGGGACACTCCGCAGCTGCAGCTGCTGGACCTGCAGGCCAATCGCCTCTCGACCTTGCCACCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | AGGAAGTGTGCAGCCTCGGGTGGCAAGGTCGAGAGGCGATTGGCCTaGAGGTCCAGCAGCTGCAGCTGCGGAGTGTCCCTCAGCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKCAASGGKVERRLA*RSSSCSCGVSLSAA Trigger: GGCTGCGCTGAGGGACACTCCGCAGCTGCAGCTGCTGGACCTGCAGGCCAATCGCCTCTCGACCTTGCCACCCGAGGCTGCACACTTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 90 bp | CTGGACGGAGCTCTGGGCTCTGACACTTTCTTAGCTCCAGCTGGCTaGAGGCCACTCCAGCCAGGCTGCGTGGACTGGCACATCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDGALGSDTFLAPAG*RPLQPGCVDWHISV Trigger: GACTGAGATGTGCCAGTCCACGCAGCCTGGCTGGAGTGGCCTTCAGCCAGCTGGAGCTAAGAAAGTGTCAGAGCCCAGAGCTCCGTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 90 bp | CAGGTCCAGGAAAGTAAGGTTCTCCAGGAAGTGTGCAGCCTCGGGTaGCAAGGTCGAGAGGCGATTGGCCTGCAGGTCCAGCAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVQESKVLQEVCSLG*QGREAIGLQVQQLQ Trigger: CTGCAGCTGCTGGACCTGCAGGCCAATCGCCTCTCGACCTTGCCACCCGAGGCTGCACACTTCCTGGAGAACCTTACTTTCCTGGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | GCAGAGTCAAGTCAGGGTCGCTGCACACCACTGTCCTGGCCTTGCTaGCGTCACTCAGGATGCGCAGACTGCAGCTGCATTCAGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AESSQGRCTPLSWPC*RHSGCADCSCIQKD Trigger: GTCCTTCTGAATGCAGCTGCAGTCTGCGCATCCTGAGTGACGGCAGCAAGGCCAGGACAGTGGTGTGCAGCGACCCTGACTTGACTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | GAGGCAGAGTCAAGTCAGGGTCGCTGCACACCACTGTCCTGGCCTTaGTGCCGTCACTCAGGATGCGCAGACTGCAGCTGCATTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EAESSQGRCTPLSWP*CRHSGCADCSCIQK Trigger: CTTCTGAATGCAGCTGCAGTCTGCGCATCCTGAGTGACGGCAGCAAGGCCAGGACAGTGGTGTGCAGCGACCCTGACTTGACTCTGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 90 bp | AAGCTGGAGGCAGAGTCAAGTCAGGGTCGCTGCACACCACTGTCCTaGCCTTGCTGCCGTCACTCAGGATGCGCAGACTGCAGCTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: KLEAESSQGRCTPLS*PCCRHSGCADCSCI Trigger: AATGCAGCTGCAGTCTGCGCATCCTGAGTGACGGCAGCAAGGCCAGGACAGTGGTGTGCAGCGACCCTGACTTGACTCTGCCTCCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 90 bp | AAAGGGGATATGATGCTGGTCACCCCTGGACGGAGCTCTGGGCTCTaGCACTTTCTTAGCTCCAGCTGGCTGAAGGCCACTCCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGDMMLVTPGRSSGL*HFLSSSWLKATPAR Trigger: CCTGGCTGGAGTGGCCTTCAGCCAGCTGGAGCTAAGAAAGTGTCAGAGCCCAGAGCTCCGTCCAGGGGTGACCAGCATCATATCCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 90 bp | GGGAGTCCAGGCTGGAACGGGCTGAGAGAAGCCTATCTCCCTCACTaGGGCTGCTCCTGGACAGAACTTCTGAGCTGTCCTCACTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPGWNGLREAYLPH*GCSWTELLSCPHYG Trigger: GCCATAGTGAGGACAGCTCAGAAGTTCTGTCCAGGAGCAGCCTCAGTGAGGGAGATAGGCTTCTCTCAGCCCGTTCCAGCCTGGACTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 90 bp | CAGAAGTACTCATTGATGCGTCTGCCGCCCCTGACACCCAAGACCTaGGAGTCCAGGCTGGAACGGGCTGAGAGAAGCCTATCTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QKYSLMRLPPLTPKT*ESRLERAERSLSPS Trigger: TGAGGGAGATAGGCTTCTCTCAGCCCGTTCCAGCCTGGACTCCCAGGTCTTGGGTGTCAGGGGCGGCAGACGCATCAATGAGTACTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | CTGGTTATTGGACAGGTCCAGGAAAGTAAGGTTCTCCAGGAAGTGTaGAGCCTCGGGTGGCAAGGTCGAGAGGCGATTGGCCTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVIGQVQESKVLQEV*SLGWQGREAIGLQV Trigger: GACCTGCAGGCCAATCGCCTCTCGACCTTGCCACCCGAGGCTGCACACTTCCTGGAGAACCTTACTTTCCTGGACCTGTCCAATAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | ACTATGGCCCAGTCTTTCCAAATTAACATAGGCCCCAGAGGCCTCTaGAGAACCCCCAGTGCGGCACTTGTGGCAGCGTCTTCGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TMAQSFQINIGPRGL*RTPSAALVAASSES Trigger: GCTCTCCGAAGACGCTGCCACAAGTGCCGCACTGGGGGTTCTGCAGAGGCCTCTGGGGCCTATGTTAATTTGGAAAGACTGGGCCATAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | CTGGACATCTTAGAGGCAATGATCACCCACACCCTGAAGGCAGCCCTCCTAGACACCACTGTCCTGGCCTaGCTGCCGTCACTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LDILEAMITHTLKAALLDTTVLA*LPSLRM Trigger: CATCCTGAGTGACGGCAGCAAGGCCAGGACAGTGGT...GTCTAGGAGGGCTGCCTTCAGGGTGTGGGTGATCATTGCCTCTAAGATGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | CAGCTTGTTGTTGTAGGCAGCAGCTTCTGCCCCCTCCCCTGTTCTTaGCCACAGGACACCTGGAATCCCACTGTATCCGGTAGAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLVVVGSSFCPLPCS*PQDTWNPTVSGRSL Trigger: CAGACTTCTACCGGATACAGTGGGATTCCAGGTGTCCTGTGGGCAAGAACAGGGGAGGGGGCAGAAGCTGCTGCCTACAACAACAAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | CATAGGCGAAACTCAGCAAGAATTCTCCTGCTACTCGCATGGTGGGTGACCAGAAAGGTCGAGAGGCGATaGGCCTGCAGGTCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRRNSARILLLLAWWVTRKVERR*ACRSSS Trigger: GCTGCTGGACCTGCAGGCCAATCGCCTCTCGACCTT...TCTGGTCACCCACCATGCGAGTAGCAGGAGAATTCTTGCTGAGTTTCGCCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | CTGGACATCTTAGAGGCAATGATCACCCACACCCTGAAGGCAGCCCTCCTAGACTTGAGTGGTCGTCCATaGGCCCTTCTCCAGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LDILEAMITHTLKAALLDLSGRP*ALLQLI Trigger: GATGAGCTGGAGAAGGGCCAATGGACGACCACTCAA...GTCTAGGAGGGCTGCCTTCAGGGTGTGGGTGATCATTGCCTCTAAGATGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 90 bp | CAGTTGCTCCACAACGTAGCAATACTGTGCTACCCAAAGGGGATATaGTGCTGGTCACCCCTGGACGGAGCTCTGGGCTCTGACACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLHNVAILCYPKGI*CWSPLDGALGSDTF Trigger: GAAAGTGTCAGAGCCCAGAGCTCCGTCCAGGGGTGACCAGCATCATATCCCCTTTGGGTAGCACAGTATTGCTACGTTGTGGAGCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 90 bp | CATCTGAAAGTTCTGGAGAGCCAGCTCCTCCTTTATGCTGGGCATTaGGGGCTTGGTAGCCAGGGCTACATGCTCGGGCATATGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLKVLESQLLLYAGH*GLGSQGYMLGHMRN Trigger: GTTCCTCATATGCCCGAGCATGTAGCCCTGGCTACCAAGCCCTCAATGCCCAGCATAAAGGAGGAGCTGGCTCTCCAGAACTTTCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | CCCAGGCTCCACAGTCATCCTTCTCATGTCTCGATGCCCAAAGACTaGATAAAGGACACTAAAGGCGGTTGTGTTCCCAGCTTGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRLHSHPSHVSMPKD*IKDTKGGCVPSLRG Trigger: GCCCCTCAAGCTGGGAACACAACCGCCTTTAGTGTCCTTTATGCAGTCTTTGGGCATCGAGACATGAGAAGGATGACTGTGGAGCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | GACACATTGCTCCTTCGTAGGCACCAAGCCCCGCACACAGACACATaGCACATACTTGGTCTTTGGAGCAAGTCCCTCGATAGTGACACT | + |
|
Preference number: 5 (lower is better) Translates to: DTLLLRRHQAPHTDT*HILGLWSKSLDSDT Trigger: AGTGTCACTATCGAGGGACTTGCTCCAAAGACCAAGTATGTGGCATGTGTCTGTGTGCGGGGCTTGGTGCCTACGAAGGAGCAATGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 90 bp | GGCCACGCTGATCACCACCATGTTGATGAGTCGCTGGGTGCCCTCTaGATCCACTACCTCATCAGTAGAGAAGATGACACATTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GHADHHHVDESLGAL*IHYLISREDDTLLL Trigger: AAGGAGCAATGTGTCATCTTCTCTACTGATGAGGTAGTGGATGCAGAGGGCACCCAGCGACTCATCAACATGGTGGTGATCAGCGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 90 bp | GGCAAATCTAGCAAAGTCCAACTTGAGCCGTCACTGGAGACTTCCTaGTGTACTGTGCCATTGAGTGGTCGTCCATTGGCCCTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GKSSKVQLEPSLETS*CTVPLSGRPLALLQ Trigger: CTGGAGAAGGGCCAATGGACGACCACTCAATGGCACAGTACACCAGGAAGTCTCCAGTGACGGCTCAAGTTGGACTTTGCTAGATTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 90 bp | TGCCCACAGGACACCTGGAATCCCACTGTATCCGGTAGAAGTCTGTaGCTCAGTGACAATCAAGGAGATCAGGGTTTCAGAAGCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPQDTWNPTVSGRSL*LSDNQGDQGFRSSQ Trigger: CTGGGAGCTTCTGAAACCCTGATCTCCTTGATTGTCACTGAGCCACAGACTTCTACCGGATACAGTGGGATTCCAGGTGTCCTGTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | CTGGACATCTTAGAGGCAATGATCACCCACACCCTGAAGGCAGCCCTCCTAGACCTAGCAAAGTCCAACTaGAGCCGTCACTGGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LDILEAMITHTLKAALLDLAKSN*SRHWRL Trigger: AAGTCTCCAGTGACGGCTCAAGTTGGACTTTGCTAG...GTCTAGGAGGGCTGCCTTCAGGGTGTGGGTGATCATTGCCTCTAAGATGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCATTGTCCAGTGGCAGTACTATAAGTGGGCCATGTAGTAAATTTGTTCCGCTGGGCATTGAGGGCTaGGTAGCCAGGGCTACATGC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSSGSTISGPCSKFVPLGIEG*VARATC Trigger: GCATGTAGCCCTGGCTACCAAGCCCTCAATGCCCAG...CGGAACAAATTTACTACATGGCCCACTTATAGTACTGCCACTGGACAATGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 90 bp | TCCTACTACCTTGAGAGACCTGACCATCTGTGCCTCCTGGTGTTCTaGTGGCTCTCTGGAGAACTCTCCTGGGACATCCATCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SYYLERPDHLCLLVF*WLSGELSWDIHLKV Trigger: AACTTTCAGATGGATGTCCCAGGAGAGTTCTCCAGAGAGCCATCAGAACACCAGGAGGCACAGATGGTCAGGTCTCTCAAGGTAGTAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGTAAAGACTTTTCAGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTACCCCCTCCCCTGTTCTaGCCCACAGGACACCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VGKDFSVEPIVQLPGPKLPPPLF*PTGHLE Trigger: TTCCAGGTGTCCTGTGGGCAAGAACAGGGGAGGGGG...TAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACTGAAAAGTCTTTACCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | ATGGACATGAGCAACAGCAACATGCCAGTCTCACATGAAGACATTCAGAGGTGTGTCCTGGGATCCCAGTaGCTCCACAACGTAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: MDMSNSNMPVSHEDIQRCVLGSQ*LHNVAI Trigger: TATTGCTACGTTGTGGAGCAACTGGGATCCCAGGAC...ACACCTCTGAATGTCTTCATGTGAGACTGGCATGTTGCTGTTGCTCATGTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGGAGTTTGTTTTAGTAACATAAATACCCACAAGAACACTCCAGAAGACCAGCAGAAGTACTCATaGATGCGTCTGCCGCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRGVCFSNINTHKNTPEDQQKYS*MRLPPL Trigger: CAGGGGCGGCAGACGCATCAATGAGTACTTCTGCTG...GTCTTCTGGAGTGTTCTTGTGGGTATTTATGTTACTAAAACAAACTCCTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGTAAAGACTTTTCAGTAGAACCAATTGTCCAACTGCCTGGTCCAAAGCTAACACATGCCACATACTaGGTCTTTGGAGCAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGKDFSVEPIVQLPGPKLTHATY*VFGASP Trigger: GGGACTTGCTCCAAAGACCAAGTATGTGGCATGTGT...TAGCTTTGGACCAGGCAGTTGGACAATTGGTTCTACTGAAAAGTCTTTACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | ACAATCAGGGTGACTGAGCACACAGTCAGGTATAAAAGTAAGTGTATGAGACTGCTCATCAGCTGGTTATaGGACAGGTCCAGGAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TIRVTEHTVRYKSKCMRLLISWL*DRSRKV Trigger: TACTTTCCTGGACCTGTCCAATAACCAGCTGATGAG...CAGTCTCATACACTTACTTTTATACCTGACTGTGTGCTCAGTCACCCTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGGAGTTTGTTTTAGTAACATAAATACCCACAAGAACACTCCAGAAGACCAGGAAGTTCTTGGCTaGGCAGATGTAGTCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VRGVCFSNINTHKNTPEDQEVLG*ADVVPR Trigger: TCTGGGGACTACATCTGCCAAGCCAAGAACTTCCTG...GTCTTCTGGAGTGTTCTTGTGGGTATTTATGTTACTAAAACAAACTCCTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 72 bp | GCTGCGGAGTGTCCCTCAGCGCAGCCCAGGGGAACGTaGCCAGGCGGTTCCCAGGCAGCCGCAGCTCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: AAECPSAQPRGT*PGGSQAAAALV Trigger: TACGAGAGCTGCGGCTGCCTGGGAACCGCCTGGTCACGTTCCCCTGGGCTGCGCTGAGGGACACTCCGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | CCAGAGGCCTCTGCAGAACCCCCAGTGCGGCACTTGTaGCAGCGTCTTCGGAGAGCCCCACAGCAAACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PEASAEPPVRHL*QRLRRAPQQTS Trigger: GCTGGTTTGCTGTGGGGCTCTCCGAAGACGCTGCCACAAGTGCCGCACTGGGGGTTCTGCAGAGGCCTCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 72 bp | GCTCTGGGCTCTGACACTTTCTTAGCTCCAGCTGGCTaGAGGCCACTCCAGCCAGGCTGCGTGGACTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALGSDTFLAPAG*RPLQPGCVDWH Trigger: GTGCCAGTCCACGCAGCCTGGCTGGAGTGGCCTTCAGCCAGCTGGAGCTAAGAAAGTGTCAGAGCCCAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 72 bp | GTCAAGTCAGGGTCGCTGCACACCACTGTCCTGGCCTaGCTGCCGTCACTCAGGATGCGCAGACTGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VKSGSLHTTVLA*LPSLRMRRLQL Trigger: CAGCTGCAGTCTGCGCATCCTGAGTGACGGCAGCAAGGCCAGGACAGTGGTGTGCAGCGACCCTGACTTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 72 bp | AGTCAGGGTCGCTGCACACCACTGTCCTGGCCTTGCTaGCGTCACTCAGGATGCGCAGACTGCAGCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: SQGRCTPLSWPC*RHSGCADCSCI Trigger: AATGCAGCTGCAGTCTGCGCATCCTGAGTGACGGCAGCAAGGCCAGGACAGTGGTGTGCAGCGACCCTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 72 bp | AGCGCGATGATGGCGGCCACGCTGATCACCACCATGTaGATGAGTCGCTGGGTGCCCTCTGCATCCACTACC | + |
|
Preference number: 6 (lower is better) Translates to: SAMMAATLITTM*MSRWVPSASTT Trigger: GGTAGTGGATGCAGAGGGCACCCAGCGACTCATCAACATGGTGGTGATCAGCGTGGCCGCCATCATCGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 90 bp | GGAGGCAGAGTCAAGTCAGGGTCGCTGCACACCACTGTCCTGGCCTaGCTGCCGTCACTCAGGATGCGCAGACTGCAGCTGCATTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GGRVKSGSLHTTVLA*LPSLRMRRLQLHSE Trigger: TTCTGAATGCAGCTGCAGTCTGCGCATCCTGAGTGACGGCAGCAAGGCCAGGACAGTGGTGTGCAGCGACCCTGACTTGACTCTGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 90 bp | GTGGGAGGCAGCGCGATGATGGCGGCCACGCTGATCACCACCATGTaGATGAGTCGCTGGGTGCCCTCTGCATCCACTACCTCATCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VGGSAMMAATLITTM*MSRWVPSASTTSSV Trigger: TACTGATGAGGTAGTGGATGCAGAGGGCACCCAGCGACTCATCAACATGGTGGTGATCAGCGTGGCCGCCATCATCGCGCTGCCTCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 72 bp | GCACCCTGCGAATGGCGGTTCTCTCTAAGCGCAGCTTaGAGGTGTCTGGAGGAATCGAAGCTGGAGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: APCEWRFSLSAA*RCLEESKLEAE Trigger: CTCTGCCTCCAGCTTCGATTCCTCCAGACACCTGCAAGCTGCGCTTAGAGAGAACCGCCATTCGCAGGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 72 bp | GGACAGGTCCAGGAAAGTAAGGTTCTCCAGGAAGTGTaGAGCCTCGGGTGGCAAGGTCGAGAGGCGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GQVQESKVLQEV*SLGWQGREAIG Trigger: GCCAATCGCCTCTCGACCTTGCCACCCGAGGCTGCACACTTCCTGGAGAACCTTACTTTCCTGGACCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 72 bp | GTTGTAGGCAGCAGCTTCTGCCCCCTCCCCTGTTCTTaGCCACAGGACACCTGGAATCCCACTGTATCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: VVGSSFCPLPCS*PQDTWNPTVSG Trigger: ACCGGATACAGTGGGATTCCAGGTGTCCTGTGGGCAAGAACAGGGGAGGGGGCAGAAGCTGCTGCCTACAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | GAAAGTAAGGTTCTCCAGGAAGTGTGCAGCCTCGGGTaGCAAGGTCGAGAGGCGATTGGCCTGCAGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ESKVLQEVCSLG*QGREAIGLQVQ Trigger: CTGGACCTGCAGGCCAATCGCCTCTCGACCTTGCCACCCGAGGCTGCACACTTCCTGGAGAACCTTACTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | CTCCAGCTGGCTGAAGGCCACTCCAGCCAGGCTGCGTaGACTGGCACATCTCAGTCTAGCCTCGATGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQLAEGHSSQAA*TGTSQSSLDED Trigger: ATCTTCATCGAGGCTAGACTGAGATGTGCCAGTCCACGCAGCCTGGCTGGAGTGGCCTTCAGCCAGCTGGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 72 bp | ATGATGCTGGTCACCCCTGGACGGAGCTCTGGGCTCTaGCACTTTCTTAGCTCCAGCTGGCTGAAGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: MMLVTPGRSSGL*HFLSSSWLKAT Trigger: AGTGGCCTTCAGCCAGCTGGAGCTAAGAAAGTGTCAGAGCCCAGAGCTCCGTCCAGGGGTGACCAGCATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 72 bp | GTTCTGGAGAGCCAGCTCCTCCTTTATGCTGGGCATTaGGGGCTTGGTAGCCAGGGCTACATGCTCGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VLESQLLLYAGH*GLGSQGYMLGH Trigger: ATGCCCGAGCATGTAGCCCTGGCTACCAAGCCCTCAATGCCCAGCATAAAGGAGGAGCTGGCTCTCCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 72 bp | GGCTGGAACGGGCTGAGAGAAGCCTATCTCCCTCACTaGGGCTGCTCCTGGACAGAACTTCTGAGCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GWNGLREAYLPH*GCSWTELLSCP Trigger: AGGACAGCTCAGAAGTTCTGTCCAGGAGCAGCCTCAGTGAGGGAGATAGGCTTCTCTCAGCCCGTTCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | ACACCCAGGGGTTGTCCTGAAGCCCTAAGATTAGCCTaGCATGATGGCCGGAAAGGAAGGGCCCGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPRGCPEALRLA*HDGRKGRARSS Trigger: TGAAGACCGGGCCCTTCCTTTCCGGCCATCATGCCAGGCTAATCTTAGGGCTTCAGGACAACCCCTGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | GCGGCCACGCTGATCACCACCATGTTGATGAGTCGCTaGGTGCCCTCTGCATCCACTACCTCATCAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AATLITTMLMSR*VPSASTTSSVE Trigger: CTCTACTGATGAGGTAGTGGATGCAGAGGGCACCCAGCGACTCATCAACATGGTGGTGATCAGCGTGGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 72 bp | CAGTCTTTCCAAATTAACATAGGCCCCAGAGGCCTCTaGAGAACCCCCAGTGCGGCACTTGTGGCAGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSFQINIGPRGL*RTPSAALVAAS Trigger: AGACGCTGCCACAAGTGCCGCACTGGGGGTTCTGCAGAGGCCTCTGGGGCCTATGTTAATTTGGAAAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 90 bp | GCCCACACGTCCAGTAGCTCCTCAGGAAGCCTCATCAGCTGGTTATaGGACAGGTCCAGGAAAGTAAGGTTCTCCAGGAAGTGTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AHTSSSSSGSLISWL*DRSRKVRFSRKCAA Trigger: GGCTGCACACTTCCTGGAGAACCTTACTTTCCTGGACCTGTCCAATAACCAGCTGATGAGGCTTCCTGAGGAGCTACTGGACGTGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 90 bp | TCACTGGAGACTTCCTGGTGTACTGTGCCATTGAGTGGTCGTCCATaGGCCCTTCTCCAGCTCATCTCAGGTCCTGGGATCCCAGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLETSWCTVPLSGRP*ALLQLISGPGIPVA Trigger: AGCAACTGGGATCCCAGGACCTGAGATGAGCTGGAGAAGGGCCAATGGACGACCACTCAATGGCACAGTACACCAGGAAGTCTCCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 72 bp | CACAACGTAGCAATACTGTGCTACCCAAAGGGGATATaGTGCTGGTCACCCCTGGACGGAGCTCTGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HNVAILCYPKGI*CWSPLDGALGS Trigger: AGAGCCCAGAGCTCCGTCCAGGGGTGACCAGCATCATATCCCCTTTGGGTAGCACAGTATTGCTACGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | GTCACTGGAGACTTCCTGGTGTACTGTGCCATTGAGTaGTCGTCCATTGGCCCTTCTCCAGCTCATCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VTGDFLVYCAIE*SSIGPSPAHLR Trigger: CCTGAGATGAGCTGGAGAAGGGCCAATGGACGACCACTCAATGGCACAGTACACCAGGAAGTCTCCAGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 72 bp | ACTTCCTGGTGTACTGTGCCATTGAGTGGTCGTCCATaGGCCCTTCTCCAGCTCATCTCAGGTCCTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: TSWCTVPLSGRP*ALLQLISGPGI Trigger: GATCCCAGGACCTGAGATGAGCTGGAGAAGGGCCAATGGACGACCACTCAATGGCACAGTACACCAGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | AGCAAAGTCCAACTTGAGCCGTCACTGGAGACTTCCTaGTGTACTGTGCCATTGAGTGGTCGTCCATTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SKVQLEPSLETS*CTVPLSGRPLA Trigger: GGCCAATGGACGACCACTCAATGGCACAGTACACCAGGAAGTCTCCAGTGACGGCTCAAGTTGGACTTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 72 bp | CCCTTCTCCAGCTCATCTCAGGTCCTGGGATCCCAGTaGCTCCACAACGTAGCAATACTGTGCTACCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PFSSSSQVLGSQ*LHNVAILCYPK Trigger: CTTTGGGTAGCACAGTATTGCTACGTTGTGGAGCAACTGGGATCCCAGGACCTGAGATGAGCTGGAGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 72 bp | GGCACCAAGCCCCGCACACAGACACATGCCACATACTaGGTCTTTGGAGCAAGTCCCTCGATAGTGACACTA | + |
|
Preference number: 6 (lower is better) Translates to: GTKPRTQTHATY*VFGASPSIVTL Trigger: TAGTGTCACTATCGAGGGACTTGCTCCAAAGACCAAGTATGTGGCATGTGTCTGTGTGCGGGGCTTGGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 90 bp | TCCTTCGTAGGCACCAAGCCCCGCACACAGACACATGCCACATACTaGGTCTTTGGAGCAAGTCCCTCGATAGTGACACTAGTCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SFVGTKPRTQTHATY*VFGASPSIVTLVFP Trigger: TGGGAAGACTAGTGTCACTATCGAGGGACTTGCTCCAAAGACCAAGTATGTGGCATGTGTCTGTGTGCGGGGCTTGGTGCCTACGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 72 bp | GATGGCTCTCTGGAGAACTCTCCTGGGACATCCATCTaGAAGTTCTGGAGAGCCAGCTCCTCCTTTATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DGSLENSPGTSI*KFWRASSSFML Trigger: CAGCATAAAGGAGGAGCTGGCTCTCCAGAACTTTCAGATGGATGTCCCAGGAGAGTTCTCCAGAGAGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 72 bp | GCATCCACTACCTCATCAGTAGAGAAGATGACACATTaGTCCTTCGTAGGCACCAAGCCCCGCACACAGACA | + |
|
Preference number: 6 (lower is better) Translates to: ASTTSSVEKMTH*SFVGTKPRTQT Trigger: TGTCTGTGTGCGGGGCTTGGTGCCTACGAAGGAGCAATGTGTCATCTTCTCTACTGATGAGGTAGTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | CACACGTCCAGTAGCTCCTCAGGAAGCCTCATCAGCTaGTTATTGGACAGGTCCAGGAAAGTAAGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HTSSSSSGSLIS*LLDRSRKVRFS Trigger: GGAGAACCTTACTTTCCTGGACCTGTCCAATAACCAGCTGATGAGGCTTCCTGAGGAGCTACTGGACGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS TCA 72 bp | ATCTCCCTCACTGAGGCTGCTCCTGGACAGAACTTCTaGGCTGTCCTCACTATGGCCCAGTCTTTCCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: ISLTEAAPGQNF*AVLTMAQSFQI Trigger: AATTTGGAAAGACTGGGCCATAGTGAGGACAGCTCAGAAGTTCTGTCCAGGAGCAGCCTCAGTGAGGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS GCA 72 bp | GATCACCACCATGTTGATGAGTCGCTGGGTGCCCTCTaGATCCACTACCTCATCAGTAGAGAAGATGACACA | + |
|
Preference number: 6 (lower is better) Translates to: DHHHVDESLGAL*IHYLISREDDT Trigger: TGTGTCATCTTCTCTACTGATGAGGTAGTGGATGCAGAGGGCACCCAGCGACTCATCAACATGGTGGTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 72 bp | GATCAGGGTTTCAGAAGCTCCCAGGAAGTTCTTGGCTaGGCAGATGTAGTCCCCAGAGTCAAAGAGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: DQGFRSSQEVLG*ADVVPRVKERH Trigger: GTGTCTCTCTTTGACTCTGGGGACTACATCTGCCAAGCCAAGAACTTCCTGGGAGCTTCTGAAACCCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CCA 72 bp | GACACCTGGAATCCCACTGTATCCGGTAGAAGTCTGTaGCTCAGTGACAATCAAGGAGATCAGGGTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DTWNPTVSGRSL*LSDNQGDQGFR Trigger: TCTGAAACCCTGATCTCCTTGATTGTCACTGAGCCACAGACTTCTACCGGATACAGTGGGATTCCAGGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||
| CDS CAA 90 bp | AATCAAGGAGATCAGGGTTTCAGAAGCTCCCAGGAAGTTCTTGGCTaGGCAGATGTAGTCCCCAGAGTCAAAGAGAGACACAACAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NQGDQGFRSSQEVLG*ADVVPRVKERHNRQ Trigger: TTGCCTGTTGTGTCTCTCTTTGACTCTGGGGACTACATCTGCCAAGCCAAGAACTTCCTGGGAGCTTCTGAAACCCTGATCTCCTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120052.2 |
||