Pregenerated sensors for LRG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037095Ensembl transcript IDs: ENSMUST00000041357.9
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGCTGAGGGAATGAGGAATCTGCACACTGACATGGGACCACATTaGCTCAGTGGCGAGCGGGGTGCCCTTGGCCAGCACCCCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: LAEGMRNLHTDMGPH*LSGERGALGQHPSH Trigger: ATGGCTGGGGTGCTGGCCAAGGGCACCCCGCTCGCCACTGAGCCAATGTGGTCCCATGTCAGTGTGCAGATTCCTCATTCCCTCAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR TCA 90 bp | AAGCCAGATAAACACAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTaGGAGGTGGAAGAGTTGTGGCGAGTGGAGAGGACCCAGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: KPDKHKVAWGPAQEE*EVEELWRVERTQRG Trigger: CCCTCTCTGGGTCCTCTCCACTCGCCACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTGTGTTTATCTGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGAGGACCCAGAGAGGGAGTCCGAGAATAGCATTCCTGGCTGAGGGAATGCAGTGGCGAGCGGGGTaGCCTTGGCCAGCACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VERTQRGSPRIAFLAEGMQWRAG*PWPAPQ Trigger: CTGGGGTGCTGGCCAAGGGCACCCCGCTCGCCACTG...CATTCCCTCAGCCAGGAATGCTATTCTCGGACTCCCTCTCTGGGTCCTCTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGGAAGAGTTGTGGCGAGTGGTCCTGGCTGAGGGAATaGGGAATCTGCACACTGACA | + |
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Preference number: 2 (lower is better) Translates to: WPGGRHRKSERWKSCGEWSWLRE*GICTLT Trigger: TGTCAGTGTGCAGATTCCTCATTCCCTCAGCCAGGA...CCACTCGCCACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGGAAGAGTTGTGGCGATCTGCACACTGACATaGGACCACATTGGCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QGGLGAGTGRVRGGRVVAICTLT*DHIGSV Trigger: CACTGAGCCAATGTGGTCCCATGTCAGTGTGCAGAT...CGCCACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCCAGATAAACACAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGGAGGAATCTGCACACTaGCATGGGACCACATTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QSQINTRWPGGRHRKSEREESAH*HGTTLA Trigger: AGCCAATGTGGTCCCATGTCAGTGTGCAGATTCCTC...CCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTGTGTTTATCTGGCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCCTAGGAGCCGTTTTATTAACTGCTTTGGTGACCCCTGAAACAGACGTGAAACACAAGGTGGCCTaGGGGCCGGCACAGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VSLGAVLLTALVTPETDVKHKVA*GPAQEE Trigger: CTCTTCCTGTGCCGGCCCCCAGGCCACCTTGTGTTT...CACGTCTGTTTCAGGGGTCACCAAAGCAGTTAATAAAACGGCTCCTAGGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR-3UTR CCA 90 bp | CTAGGAGCCGTTTTATTAACTGCTTTGGTGACCCCTGAAACAGACGTGTCAAAGAAGAGTTGTGGCGAGTaGAGAGGACCCAGAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LGAVLLTALVTPETDVSKKSCGE*RGPREG Trigger: TCCCTCTCTGGGTCCTCTCCACTCGCCACAACTCTT...CTTTGACACGTCTGTTTCAGGGGTCACCAAAGCAGTTAATAAAACGGCTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR-3UTR CAA 90 bp | GTGGAAGAGTTGTGGCGAGTGGAGAGGACCCAGAGAGGGAGTCCGAGAATAGCAGCGAGCGGGGTGCCCTaGGCCAGCACCCCAGCCATC | + |
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Preference number: 3 (lower is better) Translates to: VEELWRVERTQRGSPRIAASGVP*ASTPAI Trigger: GATGGCTGGGGTGCTGGCCAAGGGCACCCCGCTCGC...TGCTATTCTCGGACTCCCTCTCTGGGTCCTCTCCACTCGCCACAACTCTTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR CCA 72 bp | GGAATGAGGAATCTGCACACTGACATGGGACCACATTaGCTCAGTGGCGAGCGGGGTGCCCTTGGCCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GMRNLHTDMGPH*LSGERGALGQH Trigger: GTGCTGGCCAAGGGCACCCCGCTCGCCACTGAGCCAATGTGGTCCCATGTCAGTGTGCAGATTCCTCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| 3UTR CCA 72 bp | CTGAAACAGACGTGTCAAAGCCAGATAAACACAAGGTaGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LKQTCQSQINTR*PGGRHRKSERW Trigger: CCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTGTGTTTATCTGGCTTTGACACGTCTGTTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR TCA 90 bp | GACCACATTGGCTCAGTGGCGAGCGGGGTGCCCTTGGCCAGCACCCCAGCCATCACGTCCAGCAGCCGCTaGCCCTTCATGGCCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: DHIGSVASGVPLASTPAITSSSR*PFMASG Trigger: GCCCGAGGCCATGAAGGGTCAGCGGCTGCTGGACGT...GATGGCTGGGGTGCTGGCCAAGGGCACCCCGCTCGCCACTGAGCCAATGTGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR GCA 90 bp | CACATTGGCTCAGTGGCGAGCGGGGTGCCCTTGGCCAGCACCCCAGCCATCATCCGGTTCCCTTCCAGGTaGAGGCGCTGCAGCCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HIGSVASGVPLASTPAIIRFPSR*RRCSRL Trigger: AAGGCGGCTGCAGCGCCTGCACCTGGAAGGGAACCG...GATGATGGCTGGGGTGCTGGCCAAGGGCACCCCGCTCGCCACTGAGCCAATGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CCA 90 bp | ACACAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGGAAGAGTTGTGGCGCTGCAGCCGCCTTaGGCCCCGCAGGAGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TQGGLGAGTGRVRGGRVVALQPP*APQESL Trigger: GAGGGACTCCTGCGGGGCCCAAGGCGGCTGCAGCGC...CACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CCA 90 bp | CACATTGGCTCAGTGGCGAGCGGGGTGCCCTTGGCCAGCACCCCAGCCATCATCAGGTGCTGTAGGCCCTaGAAGGAGCCGGTCGCCACC | + |
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Preference number: 4 (lower is better) Translates to: HIGSVASGVPLASTPAIIRCCRP*KEPVAT Trigger: GGTGGCGACCGGCTCCTTCCAGGGCCTACAGCACCT...GATGATGGCTGGGGTGCTGGCCAAGGGCACCCCGCTCGCCACTGAGCCAATGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR GCA 90 bp | CAAAGCCAGATAAACACAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTCCAGGTGCAGGCGCTaGAGCCGCCTTGGGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: QSQINTRWPGGRHRKSERSRCRR*SRLGPR Trigger: GCGGGGCCCAAGGCGGCTGCAGCGCCTGCACCTGGA...CCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTGTGTTTATCTGGCTTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR TCA 90 bp | CAAAGCCAGATAAACACAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGGTATCAGGCATTCCTTaGGGCTGGACACCCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QSQINTRWPGGRHRKSERVSGIP*GWTPCP Trigger: TGGGCAGGGTGTCCAGCCTCAAGGAATGCCTGATAC...CCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTGTGTTTATCTGGCTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CCA 90 bp | GTGGAGAGGACCCAGAGAGGGAGTCCGAGAATAGCATTCCTGGCTGAGGGAATGCAGATCCAGGGGTTGTaGGAGATGTCGAAGCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: VERTQRGSPRIAFLAEGMQIQGL*EMSKPS Trigger: GGACGGCTTCGACATCTCCCACAACCCCTGGATCTG...CATTCCCTCAGCCAGGAATGCTATTCTCGGACTCCCTCTCTGGGTCCTCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CCA 90 bp | TTATTAACTGCTTTGGTGACCCCTGAAACAGACGTGTCAAAGCCAGATAAACACTCCGCCAGGTCCAAGTaGCCCAGGGCGTCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLTALVTPETDVSKPDKHSARSK*PRASRP Trigger: GGGCCTGGACGCCCTGGGCCACTTGGACCTGGCGGA...GTGTTTATCTGGCTTTGACACGTCTGTTTCAGGGGTCACCAAAGCAGTTAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR TCA 90 bp | GTCAGCCTAGGAGCCGTTTTATTAACTGCTTTGGTGACCCCTGAAACAGACGTGTGGCAAGGCAGGTCTTaGGATCCTGGAGGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VSLGAVLLTALVTPETDVWQGRS*DPGGFL Trigger: AAGGAAGCCTCCAGGATCTCAAGACCTGCCTTGCCA...CACGTCTGTTTCAGGGGTCACCAAAGCAGTTAATAAAACGGCTCCTAGGCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR GCA 90 bp | GTTTTATTAACTGCTTTGGTGACCCCTGAAACAGACGTGTCAAAGCCAGATAAACTATCCTCCAGCCTCTaGAGTCGGTTCCCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VLLTALVTPETDVSKPDKLSSSL*SRFPSR Trigger: CCTGGAAGGGAACCGACTGCAGAGGCTGGAGGATAG...TTTATCTGGCTTTGACACGTCTGTTTCAGGGGTCACCAAAGCAGTTAATAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CAA 90 bp | CAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGGAAGAGTTGTGGCGGGCGCTGCAGCCGCCTaGGGCCCCGCAGGAGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: QGGLGAGTGRVRGGRVVAGAAAA*GPAGVP Trigger: AGGGACTCCTGCGGGGCCCAAGGCGGCTGCAGCGCC...CGCCACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 90 bp | CCAGCAGGTTGTACCCAAGGTCGAGGGTGTGCAGGGCGCCGAGGCTaGCGAGGAGCCCGGAGGGCAGCGAACTCAGCTGGTTCTCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: PAGCTQGRGCAGRRG*RGARRAANSAGSPP Trigger: TGGCGGAGAACCAGCTGAGTTCGCTGCCCTCCGGGCTCCTCGCCAGCCTCGGCGCCCTGCACACCCTCGACCTTGGGTACAACCTGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS TCA 90 bp | AGCTGGTTCTCCGCCAGGTCCAAGTGGCCCAGGGCGTCCAGGCCCTaGAGCCATTGCGCGCTCACCTCCCGCAGCTGGTTCTCCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SWFSARSKWPRASRP*SHCALTSRSWFSLR Trigger: CCTGAGGGAGAACCAGCTGCGGGAGGTGAGCGCGCAATGGCTTCAGGGCCTGGACGCCCTGGGCCACTTGGACCTGGCGGAGAACCAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 90 bp | ACGCGCAGGAACGGTTGGGGCGCAAGCAGGCTATCCTCCAGCCTCTaGAGTCGGTTCCCTTCCAGGTGCAGGCGCTGCAGCCGCCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: TRRNGWGASRLSSSL*SRFPSRCRRCSRLG Trigger: CCCAAGGCGGCTGCAGCGCCTGCACCTGGAAGGGAACCGACTGCAGAGGCTGGAGGATAGCCTGCTTGCGCCCCAACCGTTCCTGCGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 90 bp | TTCTTGTCACAGATCCAGGGGTTGTGGGAGATGTCGAAGCCGTCCTaGATGTCGCGGGTCGGCCTCCCCAGGAACGCCCACAGGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: FLSQIQGLWEMSKPS*MSRVGLPRNAHRPG Trigger: CCCGGGCCTGTGGGCGTTCCTGGGGAGGCCGACCCGCGACATGCAGGACGGCTTCGACATCTCCCACAACCCCTGGATCTGTGACAAGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 90 bp | AGGTGCTGTAGGCCCTGGAAGGAGCCGGTCGCCACCCCGACCAACTaGTTGTCATTCAGGAACAGGACGCGCAGGAACGGTTGGGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: RCCRPWKEPVATPTN*LSFRNRTRRNGWGA Trigger: TGCGCCCCAACCGTTCCTGCGCGTCCTGTTCCTGAATGACAACCAGTTGGTCGGGGTGGCGACCGGCTCCTTCCAGGGCCTACAGCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 90 bp | CAGCGGCAAAGGTCCGCCAGGTTCTTGTCACAGATCCAGGGGTTGTaGGAGATGTCGAAGCCGTCCTGCATGTCGCGGGTCGGCCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: QRQRSARFLSQIQGL*EMSKPSCMSRVGLP Trigger: GGGGAGGCCGACCCGCGACATGCAGGACGGCTTCGACATCTCCCACAACCCCTGGATCTGTGACAAGAACCTGGCGGACCTTTGCCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 90 bp | TGTCGCGGGTCGGCCTCCCCAGGAACGCCCACAGGCCCGGGGGCGTaGTGGACAGAGAGTTATTGGACAGATCCAACATATCCAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: CRGSASPGTPTGPGA*WTESYWTDPTYPGA Trigger: AGCACCTGGATATGTTGGATCTGTCCAATAACTCTCTGTCCAGCACGCCCCCGGGCCTGTGGGCGTTCCTGGGGAGGCCGACCCGCGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 90 bp | CGCGGGTCGGCCTCCCCAGGAACGCCCACAGGCCCGGGGGCGTGCTaGACAGAGAGTTATTGGACAGATCCAACATATCCAGGTGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: RGSASPGTPTGPGAC*TESYWTDPTYPGAV Trigger: TACAGCACCTGGATATGTTGGATCTGTCCAATAACTCTCTGTCCAGCACGCCCCCGGGCCTGTGGGCGTTCCTGGGGAGGCCGACCCGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS TCA 90 bp | CTGACCCTTCATGGCCTCGGGCCCCGCACAGCGCGTGTCGTTCTGTaGGAACATCTTGTTTCGGTTGGCGACCAGCCAGCGGCAAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LTLHGLGPRTARVVL*EHLVSVGDQPAAKV Trigger: GACCTTTGCCGCTGGCTGGTCGCCAACCGAAACAAGATGTTCTCACAGAACGACACGCGCTGTGCGGGGCCCGAGGCCATGAAGGGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CAA 90 bp | CAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGGAAGAGTTGTGGCGTCACAGATCCAGGGGTaGTGGGAGATGTCGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: QGGLGAGTGRVRGGRVVASQIQG*WEMSKP Trigger: CGGCTTCGACATCTCCCACAACCCCTGGATCTGTGA...CGCCACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGGAAGAGTTGTGGCGAGTGGAGGTCCGCCAGGTTCTaGTCACAGATCCAGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: WPGGRHRKSERWKSCGEWRSARF*SQIQGL Trigger: CAACCCCTGGATCTGTGACAAGAACCTGGCGGACCT...CCACTCGCCACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 90 bp | CCAGGAACGCCCACAGGCCCGGGGGCGTGCTGGACAGAGAGTTATTaGACAGATCCAACATATCCAGGTGCTGTAGGCCCTGGAAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PGTPTGPGACWTESY*TDPTYPGAVGPGRS Trigger: GCTCCTTCCAGGGCCTACAGCACCTGGATATGTTGGATCTGTCCAATAACTCTCTGTCCAGCACGCCCCCGGGCCTGTGGGCGTTCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS TCA 90 bp | AGGAGACGGTGCTACCCTCAGCCGACTGCAGTATCAGGCATTCCTTaGGGCTGGACACCCTGCCCAAGAGGGCCAGGAGAAACAGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: RRRCYPQPTAVSGIP*GWTPCPRGPGETGF Trigger: GAACCCTGTTTCTCCTGGCCCTCTTGGGCAGGGTGTCCAGCCTCAAGGAATGCCTGATACTGCAGTCGGCTGAGGGTAGCACCGTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 90 bp | GGCGTGCTGGACAGAGAGTTATTGGACAGATCCAACATATCCAGGTaGTGTAGGCCCTGGAAGGAGCCGGTCGCCACCCCGACCAACTGG | + |
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Preference number: 5 (lower is better) Translates to: GVLDRELLDRSNISR*CRPWKEPVATPTNW Trigger: CCAGTTGGTCGGGGTGGCGACCGGCTCCTTCCAGGGCCTACAGCACCTGGATATGTTGGATCTGTCCAATAACTCTCTGTCCAGCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 90 bp | GCCCCGCACAGCGCGTGTCGTTCTGTGAGAACATCTTGTTTCGGTTaGCGACCAGCCAGCGGCAAAGGTCCGCCAGGTTCTTGTCACAGA | + |
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Preference number: 5 (lower is better) Translates to: APHSACRSVRTSCFG*RPASGKGPPGSCHR Trigger: TCTGTGACAAGAACCTGGCGGACCTTTGCCGCTGGCTGGTCGCCAACCGAAACAAGATGTTCTCACAGAACGACACGCGCTGTGCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CAA 90 bp | CAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGGAAGAGTTGTGGCGATCCTGGAGGCTTCCTaGATGCTGCCAAGAGACCAT | + |
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Preference number: 5 (lower is better) Translates to: QGGLGAGTGRVRGGRVVAILEAS*MLPRDH Trigger: ATGGTCTCTTGGCAGCATCAAGGAAGCCTCCAGGAT...CGCCACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CAA 90 bp | GGAATGAGGAATCTGCACACTGACATGGGACCACATTGGCTCAGTGGCGAGCGGCTGGCAAGGCAGGTCTaGAGATCCTGGAGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GMRNLHTDMGPHWLSGERLARQV*RSWRLP Trigger: AGGAAGCCTCCAGGATCTCAAGACCTGCCTTGCCAG...CCGCTCGCCACTGAGCCAATGTGGTCCCATGTCAGTGTGCAGATTCCTCATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CAA 90 bp | CAAGGTGGCCTGGGGGCCGGCACAGGAAGAGTGAGAGGTGGAAGAGTTGTGGCGCTGGACAGAGAGTTATaGGACAGATCCAACATATCC | + |
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Preference number: 5 (lower is better) Translates to: QGGLGAGTGRVRGGRVVALDREL*DRSNIS Trigger: GGATATGTTGGATCTGTCCAATAACTCTCTGTCCAG...CGCCACAACTCTTCCACCTCTCACTCTTCCTGTGCCGGCCCCCAGGCCACCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CAA 90 bp | ACCCAGAGAGGGAGTCCGAGAATAGCATTCCTGGCTGAGGGAATGAGGAATCTGAGTATCAGGCATTCCTaGAGGCTGGACACCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TQRGSPRIAFLAEGMRNLSIRHS*RLDTLP Trigger: GGGCAGGGTGTCCAGCCTCAAGGAATGCCTGATACT...CAGATTCCTCATTCCCTCAGCCAGGAATGCTATTCTCGGACTCCCTCTCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS-3UTR CAA 90 bp | GTCAGCCTAGGAGCCGTTTTATTAACTGCTTTGGTGACCCCTGAAACAGACGTGACCCCGACCAACTGGTaGTCATTCAGGAACAGGACG | + |
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Preference number: 5 (lower is better) Translates to: VSLGAVLLTALVTPETDVTPTNW*SFRNRT Trigger: CGTCCTGTTCCTGAATGACAACCAGTTGGTCGGGGT...CACGTCTGTTTCAGGGGTCACCAAAGCAGTTAATAAAACGGCTCCTAGGCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | CGCCTTGGGCCCCGCAGGAGTCCCTCGGGCAGCGACTCCAGCAGGTaGTACCCAAGGTCGAGGGTGTGCAGGGCGCCGAGGCTGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: RLGPRRSPSGSDSSR*YPRSRVCRAPRLAR Trigger: CCTCGCCAGCCTCGGCGCCCTGCACACCCTCGACCTTGGGTACAACCTGCTGGAGTCGCTGCCCGAGGGACTCCTGCGGGGCCCAAGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 72 bp | TCGGTTCCCTTCCAGGTGCAGGCGCTGCAGCCGCCTTaGGCCCCGCAGGAGTCCCTCGGGCAGCGACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SVPFQVQALQPP*APQESLGQRLQ Trigger: CTGGAGTCGCTGCCCGAGGGACTCCTGCGGGGCCCAAGGCGGCTGCAGCGCCTGCACCTGGAAGGGAACCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 72 bp | CCCCGCAGGAGTCCCTCGGGCAGCGACTCCAGCAGGTaGTACCCAAGGTCGAGGGTGTGCAGGGCGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: PRRSPSGSDSSR*YPRSRVCRAPR Trigger: CCTCGGCGCCCTGCACACCCTCGACCTTGGGTACAACCTGCTGGAGTCGCTGCCCGAGGGACTCCTGCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | CTCCGCCAGGTCCAAGTGGCCCAGGGCGTCCAGGCCCTGAAGCCATaGCGCGCTCACCTCCCGCAGCTGGTTCTCCCTCAGGACCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LRQVQVAQGVQALKP*RAHLPQLVLPQDQG Trigger: ACCCTGGTCCTGAGGGAGAACCAGCTGCGGGAGGTGAGCGCGCAATGGCTTCAGGGCCTGGACGCCCTGGGCCACTTGGACCTGGCGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS TCA 72 bp | TCCGCCAGGTCCAAGTGGCCCAGGGCGTCCAGGCCCTaGAGCCATTGCGCGCTCACCTCCCGCAGCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SARSKWPRASRP*SHCALTSRSWF Trigger: GAACCAGCTGCGGGAGGTGAGCGCGCAATGGCTTCAGGGCCTGGACGCCCTGGGCCACTTGGACCTGGCGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 72 bp | CCAGCTCTGCCACGTCCAGCAGCCGCTGACCCTTCATaGCCTCGGGCCCCGCACAGCGCGTGTCGTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PALPRPAAADPS*PRAPHSACRSV Trigger: CACAGAACGACACGCGCTGTGCGGGGCCCGAGGCCATGAAGGGTCAGCGGCTGCTGGACGTGGCAGAGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | CAGGCGATTGCTCGAGAGGTGCAGCTCCCGCAGACCCGGACACCCTaGCAGGGCGGCGGCGGGCAGCTGCGTCAGGTTGGAGAATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QAIAREVQLPQTRTP*QGGGGQLRQVGEFH Trigger: GTGGAATTCTCCAACCTGACGCAGCTGCCCGCCGCCGCCCTGCAAGGGTGTCCGGGTCTGCGGGAGCTGCACCTCTCGAGCAATCGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 72 bp | CAGATCCAGGGGTTGTGGGAGATGTCGAAGCCGTCCTaGATGTCGCGGGTCGGCCTCCCCAGGAACGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: QIQGLWEMSKPS*MSRVGLPRNAH Trigger: GTGGGCGTTCCTGGGGAGGCCGACCCGCGACATGCAGGACGGCTTCGACATCTCCCACAACCCCTGGATCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 72 bp | AGACCCGGACACCCTTGCAGGGCGGCGGCGGGCAGCTaGGTCAGGTTGGAGAATTCCACCGACAGATGGACA | + |
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Preference number: 6 (lower is better) Translates to: RPGHPCRAAAGS*VRLENSTDRWT Trigger: TGTCCATCTGTCGGTGGAATTCTCCAACCTGACGCAGCTGCCCGCCGCCGCCCTGCAAGGGTGTCCGGGTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 72 bp | AACGGTTGGGGCGCAAGCAGGCTATCCTCCAGCCTCTaGAGTCGGTTCCCTTCCAGGTGCAGGCGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NGWGASRLSSSL*SRFPSRCRRCS Trigger: GCTGCAGCGCCTGCACCTGGAAGGGAACCGACTGCAGAGGCTGGAGGATAGCCTGCTTGCGCCCCAACCGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | TGCTGTAGGCCCTGGAAGGAGCCGGTCGCCACCCCGACCAACTGGTaGTCATTCAGGAACAGGACGCGCAGGAACGGTTGGGGCGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: CCRPWKEPVATPTNW*SFRNRTRRNGWGAS Trigger: GCTTGCGCCCCAACCGTTCCTGCGCGTCCTGTTCCTGAATGACAACCAGTTGGTCGGGGTGGCGACCGGCTCCTTCCAGGGCCTACAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS TCA 72 bp | CATGGCCTCGGGCCCCGCACAGCGCGTGTCGTTCTGTaGGAACATCTTGTTTCGGTTGGCGACCAGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: HGLGPRTARVVL*EHLVSVGDQPA Trigger: CGCTGGCTGGTCGCCAACCGAAACAAGATGTTCTCACAGAACGACACGCGCTGTGCGGGGCCCGAGGCCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 72 bp | AGGCCCTGGAAGGAGCCGGTCGCCACCCCGACCAACTaGTTGTCATTCAGGAACAGGACGCGCAGGAACGGT | + |
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Preference number: 6 (lower is better) Translates to: RPWKEPVATPTN*LSFRNRTRRNG Trigger: ACCGTTCCTGCGCGTCCTGTTCCTGAATGACAACCAGTTGGTCGGGGTGGCGACCGGCTCCTTCCAGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | AGCCAGCGGCAAAGGTCCGCCAGGTTCTTGTCACAGATCCAGGGGTaGTGGGAGATGTCGAAGCCGTCCTGCATGTCGCGGGTCGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SQRQRSARFLSQIQG*WEMSKPSCMSRVGL Trigger: GAGGCCGACCCGCGACATGCAGGACGGCTTCGACATCTCCCACAACCCCTGGATCTGTGACAAGAACCTGGCGGACCTTTGCCGCTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | ATGGCCTCGGGCCCCGCACAGCGCGTGTCGTTCTGTGAGAACATCTaGTTTCGGTTGGCGACCAGCCAGCGGCAAAGGTCCGCCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: MASGPAQRVSFCENI*FRLATSQRQRSARF Trigger: GAACCTGGCGGACCTTTGCCGCTGGCTGGTCGCCAACCGAAACAAGATGTTCTCACAGAACGACACGCGCTGTGCGGGGCCCGAGGCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 72 bp | GGCCCCGCACAGCGCGTGTCGTTCTGTGAGAACATCTaGTTTCGGTTGGCGACCAGCCAGCGGCAAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GPAQRVSFCENI*FRLATSQRQRS Trigger: GGACCTTTGCCGCTGGCTGGTCGCCAACCGAAACAAGATGTTCTCACAGAACGACACGCGCTGTGCGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | CCCAGGAACGCCCACAGGCCCGGGGGCGTGCTGGACAGAGAGTTATaGGACAGATCCAACATATCCAGGTGCTGTAGGCCCTGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PRNAHRPGGVLDREL*DRSNISRCCRPWKE Trigger: CTCCTTCCAGGGCCTACAGCACCTGGATATGTTGGATCTGTCCAATAACTCTCTGTCCAGCACGCCCCCGGGCCTGTGGGCGTTCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | GGCCCCGCACAGCGCGTGTCGTTCTGTGAGAACATCTTGTTTCGGTaGGCGACCAGCCAGCGGCAAAGGTCCGCCAGGTTCTTGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: GPAQRVSFCENILFR*ATSQRQRSARFLSQ Trigger: CTGTGACAAGAACCTGGCGGACCTTTGCCGCTGGCTGGTCGCCAACCGAAACAAGATGTTCTCACAGAACGACACGCGCTGTGCGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 72 bp | GGACCATGGCAGGAGACGGTGCTACCCTCAGCCGACTaGAGTATCAGGCATTCCTTGAGGCTGGACACCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPWQETVLPSAD*SIRHSLRLDTL Trigger: CAGGGTGTCCAGCCTCAAGGAATGCCTGATACTGCAGTCGGCTGAGGGTAGCACCGTCTCCTGCCATGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 72 bp | TCGGCCTCCCCAGGAACGCCCACAGGCCCGGGGGCGTaGTGGACAGAGAGTTATTGGACAGATCCAACATAT | + |
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Preference number: 6 (lower is better) Translates to: SASPGTPTGPGA*WTESYWTDPTY Trigger: ATATGTTGGATCTGTCCAATAACTCTCTGTCCAGCACGCCCCCGGGCCTGTGGGCGTTCCTGGGGAGGCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 72 bp | GCCTCCCCAGGAACGCCCACAGGCCCGGGGGCGTGCTaGACAGAGAGTTATTGGACAGATCCAACATATCCA | + |
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Preference number: 6 (lower is better) Translates to: ASPGTPTGPGAC*TESYWTDPTYP Trigger: TGGATATGTTGGATCTGTCCAATAACTCTCTGTCCAGCACGCCCCCGGGCCTGTGGGCGTTCCTGGGGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 72 bp | AGGTCCGCCAGGTTCTTGTCACAGATCCAGGGGTTGTaGGAGATGTCGAAGCCGTCCTGCATGTCGCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RSARFLSQIQGL*EMSKPSCMSRV Trigger: GACCCGCGACATGCAGGACGGCTTCGACATCTCCCACAACCCCTGGATCTGTGACAAGAACCTGGCGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 72 bp | GTGCTACCCTCAGCCGACTGCAGTATCAGGCATTCCTaGAGGCTGGACACCCTGCCCAAGAGGGCCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: VLPSADCSIRHS*RLDTLPKRARR Trigger: TCTCCTGGCCCTCTTGGGCAGGGTGTCCAGCCTCAAGGAATGCCTGATACTGCAGTCGGCTGAGGGTAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 90 bp | TTGTTTCGGTTGGCGACCAGCCAGCGGCAAAGGTCCGCCAGGTTCTaGTCACAGATCCAGGGGTTGTGGGAGATGTCGAAGCCGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFRLATSQRQRSARF*SQIQGLWEMSKPSC Trigger: GCAGGACGGCTTCGACATCTCCCACAACCCCTGGATCTGTGACAAGAACCTGGCGGACCTTTGCCGCTGGCTGGTCGCCAACCGAAACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS TCA 72 bp | TGCTACCCTCAGCCGACTGCAGTATCAGGCATTCCTTaGGGCTGGACACCCTGCCCAAGAGGGCCAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: CYPQPTAVSGIP*GWTPCPRGPGE Trigger: TTCTCCTGGCCCTCTTGGGCAGGGTGTCCAGCCTCAAGGAATGCCTGATACTGCAGTCGGCTGAGGGTAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 72 bp | AGCTCGGAAACTCGGTGGGACCATGGCAGGAGACGGTaGTACCCTCAGCCGACTGCAGTATCAGGCATTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSETRWDHGRRR*YPQPTAVSGIP Trigger: AGGAATGCCTGATACTGCAGTCGGCTGAGGGTAGCACCGTCTCCTGCCATGGTCCCACCGAGTTTCCGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 72 bp | TTGGACAGATCCAACATATCCAGGTGCTGTAGGCCCTaGAAGGAGCCGGTCGCCACCCCGACCAACTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LDRSNISRCCRP*KEPVATPTNWL Trigger: CAACCAGTTGGTCGGGGTGGCGACCGGCTCCTTCCAGGGCCTACAGCACCTGGATATGTTGGATCTGTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CCA 72 bp | CCCACAGGCCCGGGGGCGTGCTGGACAGAGAGTTATTaGACAGATCCAACATATCCAGGTGCTGTAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PTGPGACWTESY*TDPTYPGAVGP Trigger: AGGGCCTACAGCACCTGGATATGTTGGATCTGTCCAATAACTCTCTGTCCAGCACGCCCCCGGGCCTGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 72 bp | CAAAGGTCCGCCAGGTTCTTGTCACAGATCCAGGGGTaGTGGGAGATGTCGAAGCCGTCCTGCATGTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: QRSARFLSQIQG*WEMSKPSCMSR Trigger: CCGCGACATGCAGGACGGCTTCGACATCTCCCACAACCCCTGGATCTGTGACAAGAACCTGGCGGACCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 72 bp | TTGGCGACCAGCCAGCGGCAAAGGTCCGCCAGGTTCTaGTCACAGATCCAGGGGTTGTGGGAGATGTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: LATSQRQRSARF*SQIQGLWEMSK Trigger: CTTCGACATCTCCCACAACCCCTGGATCTGTGACAAGAACCTGGCGGACCTTTGCCGCTGGCTGGTCGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS CAA 72 bp | CAGCGCGTGTCGTTCTGTGAGAACATCTTGTTTCGGTaGGCGACCAGCCAGCGGCAAAGGTCCGCCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: QRVSFCENILFR*ATSQRQRSARF Trigger: GAACCTGGCGGACCTTTGCCGCTGGCTGGTCGCCAACCGAAACAAGATGTTCTCACAGAACGACACGCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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| CDS GCA 72 bp | GACAGAGAGTTATTGGACAGATCCAACATATCCAGGTaGTGTAGGCCCTGGAAGGAGCCGGTCGCCACCCCG | + |
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Preference number: 6 (lower is better) Translates to: DRELLDRSNISR*CRPWKEPVATP Trigger: CGGGGTGGCGACCGGCTCCTTCCAGGGCCTACAGCACCTGGATATGTTGGATCTGTCCAATAACTCTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041357.9 |
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