RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRFN4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045045

Ensembl transcript IDs: ENSMUST00000053597.3, ENSMUST00000113822.3

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCTaGCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACA +
Preference number: 1 (lower is better)
Translates to: SRVGPRAVLPTQAGC*HLGPTVALLLPQGT
Trigger: TGTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR CCA 90 bp CCGTGCTGCCCACCCAGGCTGGGTGCTGCCACCTGGGCCCAACAGTaGCACTGCTCCTTCCTCAGGGCACATAAGAGGCTGCCCTTTCTG +
Preference number: 1 (lower is better)
Translates to: PCCPPRLGAATWAQQ*HCSFLRAHKRLPFL
Trigger: CAGAAAGGGCAGCCTCTTATGTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCTGGGTGGGCAGCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR CCA 90 bp CTTGGTGGCTCTGAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTaGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACA +
Preference number: 1 (lower is better)
Translates to: LGGSEHLLVGPVPLV*RPKPRKGFAVPPST
Trigger: TGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTCAGAGCCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR-3UTR CCA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCGCTGCCCACCCAGGCTaGGTGCTGCCACCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSAAHPG*VLPPGP
Trigger: GGGCCCAGGTGGCAGCACCCAGCCTGGGTGGGCAGC...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR-3UTR GCA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCCACCCAGGCTGGGTaGTGCCACCTGGGCCCAACA +
Preference number: 2 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGPTQAG*CHLGPT
Trigger: TGTTGGGCCCAGGTGGCAGCACCCAGCCTGGGTGGG...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR CAA 90 bp CCTCTTGGTGGCTGCAGCCCCTGCCTTGGTGGCTCTGAGCACCTGTaGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: PLGGCSPCLGGSEHL*VGPVPLVWRPKPRK
Trigger: TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTCAGAGCCACCAAGGCAGGGGCTGCAGCCACCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR-3UTR GCA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTCCCACCCAGGCTGGGTaGTGCCACCTGGGCCCAACA +
Preference number: 2 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFAPTQAG*CHLGPT
Trigger: TGTTGGGCCCAGGTGGCAGCACCCAGCCTGGGTGGG...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR-3UTR GCA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTACCCAGGCTGGGTGCTaGCACCTGGGCCCAACAGTG +
Preference number: 2 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFATQAGC*HLGPTV
Trigger: CACTGTTGGGCCCAGGTGGCAGCACCCAGCCTGGGT...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGACCTGGGCCCAACAGTaGCACTGCTCCTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRTWAQQ*HCSFLR
Trigger: CCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGT...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGACCTGGGCCCAACAGTaGCACTGCTCCTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVTWAQQ*HCSFLR
Trigger: CCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGT...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR-3UTR CCA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATaGGGGCCTGAGGTACTGAGG +
Preference number: 2 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFAVPPST*GPEVLR
Trigger: CCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGAC...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR GCA 72 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTaGTCCTTCCTCAGGGCACATAAGAGGCTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: RLGAATWAQQWH*SFLRAHKRLPF
Trigger: AAAGGGCAGCCTCTTATGTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR TCA 72 bp GAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCTaGGGTACTGAGGATAAAAAGCAGAGTGGGACCCAG +
Preference number: 3 (lower is better)
Translates to: ERVCCPTKYMGA*GTEDKKQSGTQ
Trigger: CTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
3UTR CCA 72 bp TCTGAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTaGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCA +
Preference number: 3 (lower is better)
Translates to: SEHLLVGPVPLV*RPKPRKGFAVP
Trigger: TGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACGCCCCCGTAGGCTGCTaGTGCCCAGCTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GWVLPPGPNSGTAPSSGHAPVGC*CPAPPA
Trigger: GGCTGGTGGAGCTGGGCAGCAGCAGCCTACGGGGGC...GTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACGCGCTGAGGACGGGGTaGAGGGCTCCGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GWVLPPGPNSGTAPSSGHALRTG*RAPWWV
Trigger: CACCCACCACGGAGCCCTCCACCCCGTCCTCAGCGC...GTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACCCCGTAGGCTGCTGCTaGCCAGCTCCACCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GWVLPPGPNSGTAPSSGHPVGCC*PAPPAC
Trigger: ACAGGCTGGTGGAGCTGGGCAGCAGCAGCCTACGGG...GTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCGCCCCCGTAGGCTGCTaGTGCCCAGCTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCAPVGC*CPAPPA
Trigger: GGCTGGTGGAGCTGGGCAGCAGCAGCCTACGGGGGC...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCAGTCCCAGGGCCTGGATaGAGTTGTCGGCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRAVPGPG*SCRPGA
Trigger: TGCGCCTGGCCGACAACTTCATCCAGGCCCTGGGAC...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCCAGGCCCCCGTAGGCTaGTGCTGCCCAGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCQAPVG*CCPAPP
Trigger: TGGTGGAGCTGGGCAGCAGCAGCCTACGGGGGCCTG...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCGTCCCAGGGCCTGGATaGAGTTGTCGGCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCVPGPG*SCRPGA
Trigger: TGCGCCTGGCCGACAACTTCATCCAGGCCCTGGGAC...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACGAAGAGTGGATCAGGTaGCAGGGTGGCCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: GWVLPPGPNSGTAPSSGHEEWIR*QGGQAV
Trigger: AACCGCCTGGCCACCCTGGCACCTGATCCACTCTTC...GTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCCCCTGCACCGTAGGGTaGCCCGCTGGCCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GTEDKKQSGTQGRAAHPGPCTVG*PAGPLA
Trigger: TGCTAGAGGGCCAGCGGGCCACCCTACGGTGCAGGG...GCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCGTCCCGCCCAGCACATaGGCCTGTAGGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCVPPST*ACRAWH
Trigger: GTGCCATGCCCTACAGGCCCATGTGCTGGGCGGGAC...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCTGGAGGGCTCCGTGGTaGGTGGCTCTTGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCWRAPW*VALGHG
Trigger: CCCATGCCCAAGAGCCACCCACCACGGAGCCCTCCA...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCGCAGTGGGTTCCCGCTaGAACTCAGCACCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCAVGSR*NSAPGE
Trigger: CTCCCCTGGTGCTGAGTTTCAGCGGGAACCCACTGC...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCAGCTCCACCAGCCTGTTaGCATCCAGGTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRAAPPAC*HPGARS
Trigger: GCTCCTTGCACCTGGATGGCAACAGGCTGGTGGAGC...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACAAGCAGCGGCTCCACTaGCCAGCAGCAGCAATAGGA +
Preference number: 4 (lower is better)
Translates to: GWVLPPGPNSGTAPSSGHKQRLH*PAAAIG
Trigger: TCCTATTGCTGCTGCTGGCCAGTGGAGCCGCTGCTT...GTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCAGCCTGCCAGGGTTGGTaGAGAAGCGCAGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRAACQGW*RSAGFQ
Trigger: CTGGAAACCTGCGCTTCTCCACCAACCCTGGCAGGC...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCATTGGAACATCCACACTaGGTCAGCTGGCCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRALEHPH*VSWPPQ
Trigger: CTGGGGCGGCCAGCTGACCCAGTGTGGATGTTCCAA...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCGTGGTGGGTGGCTCTTaGGCATGGGGCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GTEDKKQSGTQGRAAHPGVVGGS*AWGWCH
Trigger: GTGGCACCAGCCCCATGCCCAAGAGCCACCCACCAC...GCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACACAAAGGGTGCTGAGTaGCTCCGACAGGTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GWVLPPGPNSGTAPSSGHTKGAE*LRQVLA
Trigger: TGCCAGAACCTGTCGGAGTCACTCAGCACCCTTTGT...GTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACCAGCAAGGCCACAGTaGAGACCAGTAAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRAPARPQ*RPVRQP
Trigger: TGGCTGCCTTACTGGTCTTCACTGTGGCCTTGCTGG...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCGACTCCGACAGGTTCTaGCACACACAGGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCDSDRF*HTQGSG
Trigger: CCCGCTACCCTGTGTGTGCCAGAACCTGTCGGAGTC...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCAGCAGGAAGTGGTGGCTaGAGGCTGGTACAATCCGGT +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRAAGSGG*RLVQSG
Trigger: ACCGGATTGTACCAGCCTCCAGCCACCACTTCCTGC...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCACGGTAGCGTAGAGAAGTaGGCACAGCCCAGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: GWVLPPGPNSGTAPSSGHGSVEK*AQPSSL
Trigger: TAGACTGCTGGGCTGTGCCCACTTCTCTACGCTACC...GTGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCTCCAGGTTCAGGGTATaGAGGGCAGGCATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCSRFRV*RAGMEP
Trigger: AGGCTCCATGCCTGCCCTGCATACCCTGAACCTGGA...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCATCAGGGCCAACCCAGTaGATGGTAGGTACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRASGPTQ*MVGTGS
Trigger: TGACCCTGTACCTACCATGCACTGGGTTGGCCCTGA...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCGCACCGGGAACCAGGTaGTTCAGCAGGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GTEDKKQSGTQGRAAHPGAPGTR*FSRKWW
Trigger: CCACCACTTCCTGCTGAAGCACCTGGTTCCCGGTGC...GCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCACACTGGGTCAGCTaGCCGCCCCAGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGPHWVS*PPQAPA
Trigger: AGCTGGGGCCTGGGGCGGCCAGCTGACCCAGTGTGG...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCAAGCTCACAGTTGCAGTaGAGTGGGTTCCCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRASSQLQ*SGFPLK
Trigger: TTTCAGCGGGAACCCACTGCACTGCAACTGTGAGCT...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGGTCCAGGGAGCAGCTaGGCTGAGGACGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRGPGSS*AEDGVE
Trigger: CTCCACCCCGTCCTCAGCGCAGCTGCTCCCTGGACC...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCACACTGGGTCAGCTaGCCGCCCCAGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCPHWVS*PPQAPA
Trigger: AGCTGGGGCCTGGGGCGGCCAGCTGACCCAGTGTGG...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCTGCTTCAGCAGGAAGTaGTGGCTGGAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCCFSRK*WLEAGT
Trigger: TGTACCAGCCTCCAGCCACCACTTCCTGCTGAAGCA...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGGGCTCCGTGGTGGGTaGCTCTTGGGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRGLRGG*LLGMGL
Trigger: CAGCCCCATGCCCAAGAGCCACCCACCACGGAGCCC...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTGCGCTGAGGACGGGGTaGAGGGCTCCGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCALRTG*RAPWWV
Trigger: CACCCACCACGGAGCCCTCCACCCCGTCCTCAGCGC...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCGAGCCCCAATGCGGGTaGTGGCATTTCGAGACAATG +
Preference number: 4 (lower is better)
Translates to: GTEDKKQSGTQGRAAHPGEPQCG*WHFETM
Trigger: CATTGTCTCGAAATGCCATCACCCGCATTGGGGCTC...GCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGCCAGGCGGTTGGAGGTaGGGTCAAGGCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRPGGWR*GQGGRA
Trigger: AGCTCTCCCGCCTTGACCTCACCTCCAACCGCCTGG...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCAGTCACCTCCGTCACTTaGACTGCTGGTTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRAVTSVT*TAGSDS
Trigger: AGAATCTGAACCAGCAGTGCAAGTGACGGAGGTGAC...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGGCTGGGTGCTGCCACCTGGGCCCAACAGTGGCACTGCTCCTTCCTCAGGGCAGGGTCTCATCCTCGCTaGTGTTGTACTGGATTTGGA +
Preference number: 4 (lower is better)
Translates to: RLGAATWAQQWHCSFLRAGSHPR*CCTGFG
Trigger: TCCAAATCCAGTACAACAGCAGCGAGGATGAGACCC...TGCCCTGAGGAAGGAGCAGTGCCACTGTTGGGCCCAGGTGGCAGCACCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTGGTCCAGGGAGCAGCTaGGCTGAGGACGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCGPGSS*AEDGVE
Trigger: CTCCACCCCGTCCTCAGCGCAGCTGCTCCCTGGACC...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCGGTGGTCCCAGGGCCTaGATGAAGTTGTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGAGGPRA*MKLSAR
Trigger: CCTGGCCGACAACTTCATCCAGGCCCTGGGACCACC...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAACCCTGCACCGTAGGGTaGCCCGCTGGCCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKPCTVG*PAGPLA
Trigger: TGCTAGAGGGCCAGCGGGCCACCCTACGGTGCAGGG...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCTCCACTCGGGCTGTaGCCTCACCAGCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRAPLGL*PHQQGW
Trigger: CCAACCCTGCTGGTGAGGCCACAGCCCGAGTGGAGC...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGTCCCGCCCAGCACATaGGCCTGTAGGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRVPPST*ACRAWH
Trigger: GTGCCATGCCCTACAGGCCCATGTGCTGGGCGGGAC...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGGTGGTGGGTGGCTCTTaGGCATGGGGCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGVVGGS*AWGWCH
Trigger: GTGGCACCAGCCCCATGCCCAAGAGCCACCCACCAC...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGGCTCCGTGGTGGGTaGCTCTTGGGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVGLRGG*LLGMGL
Trigger: CAGCCCCATGCCCAAGAGCCACCCACCACGGAGCCC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCCTCCTCCCAGGCGCCTaGCATACCCGTAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: STWGPEVLRIKSRVGPRALLPGA*HTRSIL
Trigger: GAGGATGCTACGGGTATGCCAGGCGCCTGGGAGGAG...GGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGCCAGGCGGTTGGAGGTaGGGTCAAGGCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVPGGWR*GQGGRA
Trigger: AGCTCTCCCGCCTTGACCTCACCTCCAACCGCCTGG...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCGGCGCAGTTCAACTGTaGGCCTGTCCACGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGAGAVQL*ACPRWV
Trigger: CACCCAACGTGGACAGGCGCACAGTTGAACTGCGCC...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCCTGTTGCCATCCAGGTaGAAGGAGCGCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGALLPSR*KERRLS
Trigger: GGAGAGCCTGCGCTCCTTGCACCTGGATGGCAACAG...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCCCCGTAGGCTGCTGCTaGCCAGCTCCACCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSPVGCC*PAPPAC
Trigger: ACAGGCTGGTGGAGCTGGGCAGCAGCAGCCTACGGG...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCCCAGAAGTAGCGGCCTaGCAGGGTTGGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGAPEVAA*QGWWRS
Trigger: GCTTCTCCACCAACCCTGGCAGGCCGCTACTTCTGG...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGCTCCACTCGGGCTGTaGCCTCACCAGCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVAPLGL*PHQQGW
Trigger: CCAACCCTGCTGGTGAGGCCACAGCCCGAGTGGAGC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGCTCCTCCCAGGCGCCTaGCATACCCGTAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRLLPGA*HTRSIL
Trigger: GAGGATGCTACGGGTATGCCAGGCGCCTGGGAGGAG...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGCAGTGGGTTCCCGCTaGAACTCAGCACCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVAVGSR*NSAPGE
Trigger: CTCCCCTGGTGCTGAGTTTCAGCGGGAACCCACTGC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCTGTTGCCATCCAGGTaGAAGGAGCGCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGLLPSR*KERRLS
Trigger: GGAGAGCCTGCGCTCCTTGCACCTGGATGGCAACAG...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCACAGCAGCTCACAGTTaGAGTGCAGTGGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: STWGPEVLRIKSRVGPRATAAHS*SAVGSR
Trigger: GCGGGAACCCACTGCACTGCAACTGTGAGCTGCTGT...GGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGTGCGCCTGTCCACGTTaGGTGGCACAAACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGCACPR*VAQTAG
Trigger: GCCTGCTGTTTGTGCCACCCAACGTGGACAGGCGCA...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGTGCGCCTGTCCACGTTaGGTGGCACAAACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRCACPR*VAQTAG
Trigger: GCCTGCTGTTTGTGCCACCCAACGTGGACAGGCGCA...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCGTTGCGGAAGTCAGGTaGTCCCAGGGCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGAVAEVR*SQGLDE
Trigger: TTCATCCAGGCCCTGGGACCACCTGACTTCCGCAAC...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGTATGCAGGGCAGGCATaGAGCCTATGCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRYAGQA*SLCQPR
Trigger: CCTGGGCTGGCATAGGCTCCATGCCTGCCCTGCATA...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGCGGCCTGCCAGGGTTaGTGGAGAAGCGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKAACQG*WRSAGF
Trigger: GAAACCTGCGCTTCTCCACCAACCCTGGCAGGCCGC...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGTTGGAACATCCACACTaGGTCAGCTGGCCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGLEHPH*VSWPPQ
Trigger: CTGGGGCGGCCAGCTGACCCAGTGTGGATGTTCCAA...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCGCAGGAAGTGGTGGCTaGAGGCTGGTACAATCCGGT +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGAAGSGG*RLVQSG
Trigger: ACCGGATTGTACCAGCCTCCAGCCACCACTTCCTGC...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGGGCACAAAGGGTGCTaGGTGACTCCGACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRGHKGC*VTPTGS
Trigger: AGAACCTGTCGGAGTCACTCAGCACCCTTTGTGCCC...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGCTCCACCAGCCTGTTaGCATCCAGGTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVAPPAC*HPGARS
Trigger: GCTCCTTGCACCTGGATGGCAACAGGCTGGTGGAGC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGCAGGCCCCCGTAGGCTaGTGCTGCCCAGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMQAPVG*CCPAPP
Trigger: TGGTGGAGCTGGGCAGCAGCAGCCTACGGGGGCCTG...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGTATGCAGGGCAGGCATaGAGCCTATGCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVYAGQA*SLCQPR
Trigger: CCTGGGCTGGCATAGGCTCCATGCCTGCCCTGCATA...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGCCTGCCAGGGTTGGTaGAGAAGCGCAGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVACQGW*RSAGFQ
Trigger: CTGGAAACCTGCGCTTCTCCACCAACCCTGGCAGGC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGTCACCAGGCCAGAGGTaGCAGTCACCTCCGTCACTT +
Preference number: 4 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGSPGQR*QSPPSL
Trigger: AAGTGACGGAGGTGACTGCCACCTCTGGCCTGGTGA...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCCTGTTGTACTGGATTTaGAACATCCACACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCLLYWI*NIHTGS
Trigger: TGACCCAGTGTGGATGTTCCAAATCCAGTACAACAG...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCGTGGTGGCTGGAGGCTaGTACAATCCGGTAGATGAG +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGAVVAGG*YNPVDE
Trigger: CTCATCTACCGGATTGTACCAGCCTCCAGCCACCAC...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCGGGCACAAAGGGTGCTaGGTGACTCCGACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSGHKGC*VTPTGS
Trigger: AGAACCTGTCGGAGTCACTCAGCACCCTTTGTGCCC...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAACCAGCAAGGCCACAGTaGAGACCAGTAAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKPARPQ*RPVRQP
Trigger: TGGCTGCCTTACTGGTCTTCACTGTGGCCTTGCTGG...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCCCAGCCCTGTCATGTTaGGGAAGTCAGGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSPALSC*GSQVVP
Trigger: TGGGACCACCTGACTTCCGCAACATGACAGGGCTGG...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGAAGAGTGGATCAGGTaGCAGGGTGGCCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFAEEWIR*QGGQAV
Trigger: AACCGCCTGGCCACCCTGGCACCTGATCCACTCTTC...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp AGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCAGCTCACAGTTGCAGTaGAGTGGGTTCCCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: STWGPEVLRIKSRVGPRASSQLQ*SGFPLK
Trigger: TTTCAGCGGGAACCCACTGCACTGCAACTGTGAGCT...GGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGACAGCAGCTCACAGTTaGAGTGCAGTGGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVTAAHS*SAVGSR
Trigger: GCGGGAACCCACTGCACTGCAACTGTGAGCTGCTGT...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCAGGCTCGAGAAGAGTTaGCAACCAGCCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGARLEKS*QPACHQ
Trigger: CTGATGACAGGCTGGTTGGCAACTCTTCTCGAGCCT...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTCCTGTCCACGTTGGGTaGCACAAACAGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFAPVHVG*HKQQAS
Trigger: CGAGGCCTGCTGTTTGTGCCACCCAACGTGGACAGG...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGTTGCGGAAGTCAGGTaGTCCCAGGGCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVVAEVR*SQGLDE
Trigger: TTCATCCAGGCCCTGGGACCACCTGACTTCCGCAAC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTTCACCAGGCCAGAGGTaGCAGTCACCTCCGTCACTT +
Preference number: 4 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCSPGQR*QSPPSL
Trigger: AAGTGACGGAGGTGACTGCCACCTCTGGCCTGGTGA...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGTGGTGGCTGGAGGCTaGTACAATCCGGTAGATGAG +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRVVAGG*YNPVDE
Trigger: CTCATCTACCGGATTGTACCAGCCTCCAGCCACCAC...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGGTAGCGTAGAGAAGTaGGCACAGCCCAGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRGSVEK*AQPSSL
Trigger: TAGACTGCTGGGCTGTGCCCACTTCTCTACGCTACC...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAATGGCTGAGTTTGAGTaGGAGGCGGCCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKMAEFE*EAAIPS
Trigger: GCTGGGAATGGCCGCCTCCCACTCAAACTCAGCCAT...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGAGCCCCAATGCGGGTaGTGGCATTTCGAGACAATG +
Preference number: 4 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKEPQCG*WHFETM
Trigger: CATTGTCTCGAAATGCCATCACCCGCATTGGGGCTC...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTGCGATGCGGCCCAGTTaGTTGCCACTGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCAMRPS*LPLRMR
Trigger: TCTCATTCTCAGTGGCAATCAACTGGGCCGCATCGC...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGCCACTGAGAATGAGATaGTGGAGGTTGACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVPLRMR*WRLTGP
Trigger: GGGGCCTGTCAACCTCCAGCATCTCATTCTCAGTGG...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCTCAGGGCCAACCCAGTaGATGGTAGGTACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSSGPTQ*MVGTGS
Trigger: TGACCCTGTACCTACCATGCACTGGGTTGGCCCTGA...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCGCATCGATGAGGTTATaGTCCAGGTTCAGGGTATGC +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGAASMRL*SRFRVC
Trigger: GCATACCCTGAACCTGGACCATAACCTCATCGATGC...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAACCTCACCAGCAGGGTTaGTGGCAATGCAGGTATAGG +
Preference number: 4 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKPHQQG*WQCRYR
Trigger: CCTATACCTGCATTGCCACCAACCCTGCTGGTGAGG...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCCCTCACCAGCAGGGTTaGTGGCAATGCAGGTATAGG +
Preference number: 4 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSPHQQG*WQCRYR
Trigger: CCTATACCTGCATTGCCACCAACCCTGCTGGTGAGG...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTTGCTTCAGCAGGAAGTaGTGGCTGGAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCCFSRK*WLEAGT
Trigger: TGTACCAGCCTCCAGCCACCACTTCCTGCTGAAGCA...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTATGGCTGAGTTTGAGTaGGAGGCGGCCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFAMAEFE*EAAIPS
Trigger: GCTGGGAATGGCCGCCTCCCACTCAAACTCAGCCAT...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGCGATGCGGCCCAGTTaGTTGCCACTGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFAAMRPS*LPLRMR
Trigger: TCTCATTCTCAGTGGCAATCAACTGGGCCGCATCGC...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTGGGGTAGTGCATCGATaGGGTTATGGTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCGVVHR*GYGPGS
Trigger: TGAACCTGGACCATAACCTCATCGATGCACTACCCC...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGCGCAGTTCAACTGTaGGCCTGTCCACGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMGAVQL*ACPRWV
Trigger: CACCCAACGTGGACAGGCGCACAGTTGAACTGCGCC...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGACTCCGACAGGTTCTaGCACACACAGGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMDSDRF*HTQGSG
Trigger: CCCGCTACCCTGTGTGTGCCAGAACCTGTCGGAGTC...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGTTCAGCAGGAAGTGGTaGCTGGAGGCTGGTACAATC +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVFSRKW*LEAGTI
Trigger: GATTGTACCAGCCTCCAGCCACCACTTCCTGCTGAA...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCCCATTGGTCTGGGATTaGACATGGCTGAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGAPLVWD*TWLSLS
Trigger: ACTCAAACTCAGCCATGTCCAATCCCAGACCAATGG...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGTGCCACCATTGGTCTaGGATTGGACATGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVVPPLV*DWTWLS
Trigger: ACTCAGCCATGTCCAATCCCAGACCAATGGTGGCAC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGTCCAGGTTCAGGGTATaGAGGGCAGGCATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMSRFRV*RAGMEP
Trigger: AGGCTCCATGCCTGCCCTGCATACCCTGAACCTGGA...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGTCACCTCCGTCACTTaGACTGCTGGTTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVVTSVT*TAGSDS
Trigger: AGAATCTGAACCAGCAGTGCAAGTGACGGAGGTGAC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCGGGTCTCATCCTCGCTaGTGTTGTACTGGATTTGGA +
Preference number: 4 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSGSHPR*CCTGFG
Trigger: TCCAAATCCAGTACAACAGCAGCGAGGATGAGACCC...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGAAGCAGCGGCTCCACTaGCCAGCAGCAGCAATAGGA +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMKQRLH*PAAAIG
Trigger: TCCTATTGCTGCTGCTGGCCAGTGGAGCCGCTGCTT...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGCATCGATGAGGTTATaGTCCAGGTTCAGGGTATGC +
Preference number: 4 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVASMRL*SRFRVC
Trigger: GCATACCCTGAACCTGGACCATAACCTCATCGATGC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCCTCGCTGCTGTTGTACTaGATTTGGAACATCCACACT +
Preference number: 4 (lower is better)
Translates to: LEAKTKERVCCPTKYMGASLLLY*IWNIHT
Trigger: AGTGTGGATGTTCCAAATCCAGTACAACAGCAGCGA...GGCCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGCCACTGAGAATGAGATaGTGGAGGTTGACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMPLRMR*WRLTGP
Trigger: GGGGCCTGTCAACCTCCAGCATCTCATTCTCAGTGG...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCGCGGCCTGCCAGGGTTaGTGGAGAAGCGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPAACQG*WRSAGF
Trigger: GAAACCTGCGCTTCTCCACCAACCCTGGCAGGCCGC...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCCTGGTGTTCCCACCATaGGGCAAGGCCAGTACCCGG +
Preference number: 4 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPLVFPP*GKASTR
Trigger: CCGGGTACTGGCCTTGCCCCATGGTGGGAACACCAG...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGCTGTTGTACTGGATTTaGAACATCCACACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGLLYWI*NIHTGS
Trigger: TGACCCAGTGTGGATGTTCCAAATCCAGTACAACAG...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAACCATTGGTCTGGGATTaGACATGGCTGAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKPLVWD*TWLSLS
Trigger: ACTCAAACTCAGCCATGTCCAATCCCAGACCAATGG...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR TCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGTAGTGCATCGATaGGGTTATGGTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMGVVHR*GYGPGS
Trigger: TGAACCTGGACCATAACCTCATCGATGCACTACCCC...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCCCAGAAGTAGCGGCCTaGCAGGGTTGGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPPEVAA*QGWWRS
Trigger: GCTTCTCCACCAACCCTGGCAGGCCGCTACTTCTGG...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGAGGCTCGAGAAGAGTTaGCAACCAGCCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMRLEKS*QPACHQ
Trigger: CTGATGACAGGCTGGTTGGCAACTCTTCTCGAGCCT...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR GCA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCGCACCGGGAACCAGGTaGTTCAGCAGGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPAPGTR*FSRKWW
Trigger: CCACCACTTCCTGCTGAAGCACCTGGTTCCCGGTGC...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCCCTGTCCACGTTGGGTaGCACAAACAGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPPVHVG*HKQQAS
Trigger: CGAGGCCTGCTGTTTGTGCCACCCAACGTGGACAGG...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGTTCAGCAGGAAGTGGTaGCTGGAGGCTGGTACAATC +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMFSRKW*LEAGTI
Trigger: GATTGTACCAGCCTCCAGCCACCACTTCCTGCTGAA...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCAACAGCAGGCCTCGGTaGGCACAAAGGGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPNSRPR*AQRVLS
Trigger: ACTCAGCACCCTTTGTGCCCACCGAGGCCTGCTGTT...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGTCGCTGCTGTTGTACTaGATTTGGAACATCCACACT +
Preference number: 4 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMSLLLY*IWNIHT
Trigger: AGTGTGGATGTTCCAAATCCAGTACAACAGCAGCGA...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CCA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCGTGCCACCATTGGTCTaGGATTGGACATGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPVPPLV*DWTWLS
Trigger: ACTCAGCCATGTCCAATCCCAGACCAATGGTGGCAC...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 90 bp CATGTACAGAGTGGCTCCGCCGGGCCCAGGCTCCTCCCAGGCGCCTaGCATACCCGTAGCATCCTCCGGTGTCTCCTAGGTCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: HVQSGSAGPRLLPGA*HTRSILRCLLGPGS
Trigger: GCTCCCTGGACCTAGGAGACACCGGAGGATGCTACGGGTATGCCAGGCGCCTGGGAGGAGCCTGGGCCCGGCGGAGCCACTCTGTACATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS GCA 90 bp CATACCCGTAGCATCCTCCGGTGTCTCCTAGGTCCAGGGAGCAGCTaGGCTGAGGACGGGGTGGAGGGCTCCGTGGTGGGTGGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: HTRSILRCLLGPGSS*AEDGVEGSVVGGSW
Trigger: CCAAGAGCCACCCACCACGGAGCCCTCCACCCCGTCCTCAGCGCAGCTGCTCCCTGGACCTAGGAGACACCGGAGGATGCTACGGGTATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 90 bp AGCTGCGCTGAGGACGGGGTGGAGGGCTCCGTGGTGGGTGGCTCTTaGGCATGGGGCTGGTGCCACCATTGGTCTGGGATTGGACATGGC +
Preference number: 5 (lower is better)
Translates to: SCAEDGVEGSVVGGS*AWGWCHHWSGIGHG
Trigger: GCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAGAGCCACCCACCACGGAGCCCTCCACCCCGTCCTCAGCGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCCGTGGTGGGTGGCTCTaGGGCATGGGGCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GTEDKKQSGTQGRAAHPGRGGWL*GMGLVP
Trigger: TGGCACCAGCCCCATGCCCAAGAGCCACCCACCACG...GCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 90 bp CTCTTGGGCATGGGGCTGGTGCCACCATTGGTCTGGGATTGGACATaGCTGAGTTTGAGTGGGAGGCGGCCATTCCCAGCTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LLGMGLVPPLVWDWT*LSLSGRRPFPAPRP
Trigger: GGGCCGGGGAGCTGGGAATGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS GCA 90 bp GGAGCTCCACTCGGGCTGTGGCCTCACCAGCAGGGTTGGTGGCAATaGAGGTATAGGCTCCTGCATCTCCAGCGCCCGTCACCCCAATCT +
Preference number: 5 (lower is better)
Translates to: GAPLGLWPHQQGWWQ*RYRLLHLQRPSPQS
Trigger: AGATTGGGGTGACGGGCGCTGGAGATGCAGGAGCCTATACCTGCATTGCCACCAACCCTGCTGGTGAGGCCACAGCCCGAGTGGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 90 bp CTGGGTCAGCTGGCCGCCCCAGGCCCCAGCTCACCAGGCCAGAGGTaGCAGTCACCTCCGTCACTTGCACTGCTGGTTCAGATTCTAAAG +
Preference number: 5 (lower is better)
Translates to: LGQLAAPGPSSPGQR*QSPPSLALLVQILK
Trigger: CTTTAGAATCTGAACCAGCAGTGCAAGTGACGGAGGTGACTGCCACCTCTGGCCTGGTGAGCTGGGGCCTGGGGCGGCCAGCTGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 90 bp GGGTGGCTCTTGGGCATGGGGCTGGTGCCACCATTGGTCTGGGATTaGACATGGCTGAGTTTGAGTGGGAGGCGGCCATTCCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GWLLGMGLVPPLVWD*TWLSLSGRRPFPAP
Trigger: GGGAGCTGGGAATGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAGAGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp AGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTGGGTGCAGCTCCACCAGCCTGTaGCCATCCAGGTGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: RIKSRVGPRAVLPTQAGCSSTSL*PSRCKE
Trigger: CTCCTTGCACCTGGATGGCAACAGGCTGGTGGAGCT...GCACCCAGCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS TCA 90 bp CCAGCCCTGTCATGTTGCGGAAGTCAGGTGGTCCCAGGGCCTGGATaGAGTTGTCGGCCAGGCGCAGTTCAACTGTGCGCCTGTCCACGT +
Preference number: 5 (lower is better)
Translates to: PALSCCGSQVVPGPG*SCRPGAVQLCACPR
Trigger: ACGTGGACAGGCGCACAGTTGAACTGCGCCTGGCCGACAACTTCATCCAGGCCCTGGGACCACCTGACTTCCGCAACATGACAGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS GCA 90 bp CCTGGGGGTAGTGCATCGATGAGGTTATGGTCCAGGTTCAGGGTATaGAGGGCAGGCATGGAGCCTATGCCAGCCCAGGGAACCTGCCGG +
Preference number: 5 (lower is better)
Translates to: PGGSASMRLWSRFRV*RAGMEPMPAQGTCR
Trigger: CCGGCAGGTTCCCTGGGCTGGCATAGGCTCCATGCCTGCCCTGCATACCCTGAACCTGGACCATAACCTCATCGATGCACTACCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 90 bp GGTCTCATCCTCGCTGCTGTTGTACTGGATTTGGAACATCCACACTaGGTCAGCTGGCCGCCCCAGGCCCCAGCTCACCAGGCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GLILAAVVLDLEHPH*VSWPPQAPAHQARG
Trigger: ACCTCTGGCCTGGTGAGCTGGGGCCTGGGGCGGCCAGCTGACCCAGTGTGGATGTTCCAAATCCAGTACAACAGCAGCGAGGATGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 90 bp CGTGGTGGGTGGCTCTTGGGCATGGGGCTGGTGCCACCATTGGTCTaGGATTGGACATGGCTGAGTTTGAGTGGGAGGCGGCCATTCCCA +
Preference number: 5 (lower is better)
Translates to: RGGWLLGMGLVPPLV*DWTWLSLSGRRPFP
Trigger: TGGGAATGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAGAGCCACCCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS TCA 90 bp GCCAGGCGGTTGGAGGTGAGGTCAAGGCGGGAGAGCTGGCTGAGCTaGGCAAAGACACCTGGGGGTAGTGCATCGATGAGGTTATGGTCC +
Preference number: 5 (lower is better)
Translates to: ARRLEVRSRRESWLS*AKTPGGSASMRLWS
Trigger: GGACCATAACCTCATCGATGCACTACCCCCAGGTGTCTTTGCTCAGCTCAGCCAGCTCTCCCGCCTTGACCTCACCTCCAACCGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS GCA 90 bp GCTCGAGAAGAGTTGCCAACCAGCCTGTCATCAGGGCCAACCCAGTaGATGGTAGGTACAGGGTCACCAAGGGCCCTGCACCGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: AREELPTSLSSGPTQ*MVGTGSPRALHRRV
Trigger: CACCCTACGGTGCAGGGCCCTTGGTGACCCTGTACCTACCATGCACTGGGTTGGCCCTGATGACAGGCTGGTTGGCAACTCTTCTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGAGGGTGGCCAGGCGGTaGGAGGTGAGGTCAAGGCGG +
Preference number: 5 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRRVARR*EVRSRR
Trigger: CCGCCTTGACCTCACCTCCAACCGCCTGGCCACCCT...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 90 bp CTCCTGCATCTCCAGCGCCCGTCACCCCAATCTCTAGGGTCCCATTaGGGAAAGCCCAGGCTCGAGAAGAGTTGCCAACCAGCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: LLHLQRPSPQSLGSH*GKPRLEKSCQPACH
Trigger: ATGACAGGCTGGTTGGCAACTCTTCTCGAGCCTGGGCTTTCCCCAATGGGACCCTAGAGATTGGGGTGACGGGCGCTGGAGATGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGGGTGGCCAGGCGGTaGGAGGTGAGGTCAAGGCGG +
Preference number: 5 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSRVARR*EVRSRR
Trigger: CCGCCTTGACCTCACCTCCAACCGCCTGGCCACCCT...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCCGTGGTGGGTGGCTCTaGGGCATGGGGCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSRGGWL*GMGLVP
Trigger: TGGCACCAGCCCCATGCCCAAGAGCCACCCACCACG...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGGTGCGCCTGTCCACGTaGGGTGGCACAAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGVRLST*GGTNSR
Trigger: CCTGCTGTTTGTGCCACCCAACGTGGACAGGCGCAC...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp AGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCAGCTCCACCAGCCTGTaGCCATCCAGGTGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: STWGPEVLRIKSRVGPRASSTSL*PSRCKE
Trigger: CTCCTTGCACCTGGATGGCAACAGGCTGGTGGAGCT...GGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGAGCGGCCTGCCAGGGTaGGTGGAGAAGCGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGSGLPG*VEKRRF
Trigger: AAACCTGCGCTTCTCCACCAACCCTGGCAGGCCGCT...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS GCA 90 bp GGTTATGGTCCAGGTTCAGGGTATGCAGGGCAGGCATGGAGCCTATaGCAGCCCAGGGAACCTGCCGGAGGTTGTTATAGGACACATCCA +
Preference number: 5 (lower is better)
Translates to: GYGPGSGYAGQAWSL*QPREPAGGCYRTHP
Trigger: TGGATGTGTCCTATAACAACCTCCGGCAGGTTCCCTGGGCTGGCATAGGCTCCATGCCTGCCCTGCATACCCTGAACCTGGACCATAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp CCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGAGGGCCTGGATGAAGTaGTCGGCCAGGCGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: PSTWGPEVLRIKSRVGPRRAWMK*SARRSS
Trigger: TGAACTGCGCCTGGCCGACAACTTCATCCAGGCCCT...CCTGGGTCCCACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTAGCGGCCTGCCAGGGTaGGTGGAGAAGCGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCSGLPG*VEKRRF
Trigger: AAACCTGCGCTTCTCCACCAACCCTGGCAGGCCGCT...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGGGGGGCTGGTGCCACCATaGGTCTGGGATTGGACATGG +
Preference number: 5 (lower is better)
Translates to: VWRPKPRKGFAVPPSTWGGLVPP*VWDWTW
Trigger: CCATGTCCAATCCCAGACCAATGGTGGCACCAGCCC...CCCCCATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGAC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTGCGCCTGTCCACGTaGGGTGGCACAAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFAVRLST*GGTNSR
Trigger: CCTGCTGTTTGTGCCACCCAACGTGGACAGGCGCAC...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGAGGGCCTGGATGAAGTaGTCGGCCAGGCGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVRAWMK*SARRSS
Trigger: TGAACTGCGCCTGGCCGACAACTTCATCCAGGCCCT...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCACAGCAGCTCACAGTaGCAGTGCAGTGGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: GGTCPFSLEAKTKERVCCHSSSQ*QCSGFP
Trigger: CGGGAACCCACTGCACTGCAACTGTGAGCTGCTGTG...ACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GGTACTGAGGATAAAAAGCAGAGTGGGACCCAGGGCCGTGCTGCCCACCCAGGCTCATCCTCGCTGCTGTaGTACTGGATTTGGAACATC +
Preference number: 5 (lower is better)
Translates to: GTEDKKQSGTQGRAAHPGSSSLL*YWIWNI
Trigger: GATGTTCCAAATCCAGTACAACAGCAGCGAGGATGA...GCCTGGGTGGGCAGCACGGCCCTGGGTCCCACTCTGCTTTTTATCCTCAGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGGGGCTGGTGCCACCATaGGTCTGGGATTGGACATGG +
Preference number: 5 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVGLVPP*VWDWTW
Trigger: CCATGTCCAATCCCAGACCAATGGTGGCACCAGCCC...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp TTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTATGAGATGCTGGAGGTaGACAGGCCCCCGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVGPVPLVWRPKPRKGFAMRCWR*TGPRRL
Trigger: CAGCCTACGGGGGCCTGTCAACCTCCAGCATCTCAT...AGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAGGCGATGCGGCCCAGTaGATTGCCACTGAGAATGAG +
Preference number: 5 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKGDAAQ*IATENE
Trigger: CTCATTCTCAGTGGCAATCAACTGGGCCGCATCGCC...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GAGCACCTGTTGGTGGGACCTGTCCCTTTAGTCTGGAGGCCAAAACCAAGGAAAATCTCTAGGGTCCCATaGGGGAAAGCCCAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: EHLLVGPVPLVWRPKPRKISRVP*GKAQAR
Trigger: TCGAGCCTGGGCTTTCCCCAATGGGACCCTAGAGAT...TTTCCTTGGTTTTGGCCTCCAGACTAAAGGGACAGGTCCCACCAACAGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCATCTCTAGGGTCCCATaGGGGAAAGCCCAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSISRVP*GKAQAR
Trigger: TCGAGCCTGGGCTTTCCCCAATGGGACCCTAGAGAT...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGATGAGATGCTGGAGGTaGACAGGCCCCCGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMMRCWR*TGPRRL
Trigger: CAGCCTACGGGGGCCTGTCAACCTCCAGCATCTCAT...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GGGTTTGCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGTCACCTCCGTCACTaGCACTGCTGGTTCAGATTC +
Preference number: 5 (lower is better)
Translates to: GFAVPPSTWGPEVLRIKSSHLRH*HCWFRF
Trigger: GAATCTGAACCAGCAGTGCAAGTGACGGAGGTGACT...GCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGCAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp GCTGTCCCACCAAGTACATGGGGGCCTGAGGTACTGAGGATAAAAAGCAGAGTGAGTCACCTCCGTCACTaGCACTGCTGGTTCAGATTC +
Preference number: 5 (lower is better)
Translates to: AVPPSTWGPEVLRIKSRVSHLRH*HCWFRF
Trigger: GAATCTGAACCAGCAGTGCAAGTGACGGAGGTGACT...CACTCTGCTTTTTATCCTCAGTACCTCAGGCCCCCATGTACTTGGTGGGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp TTTAGTCTGGAGGCCAAAACCAAGGAAAGGGTTTGCTGTCCCACCAAGTACATGGGCGATGCGGCCCAGTaGATTGCCACTGAGAATGAG +
Preference number: 5 (lower is better)
Translates to: FSLEAKTKERVCCPTKYMGDAAQ*IATENE
Trigger: CTCATTCTCAGTGGCAATCAACTGGGCCGCATCGCC...CATGTACTTGGTGGGACAGCAAACCCTTTCCTTGGTTTTGGCCTCCAGACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCACCAGCCCTGTCATGTaGCGGAAGTCAGGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPTSPVM*RKSGGP
Trigger: GGGACCACCTGACTTCCGCAACATGACAGGGCTGGT...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS-3UTR CAA 90 bp CCCAACAATTTTATTATAAATAGAAACAAGACTCCCTCTTGGTGGCTGCAGCCCCACAGCAGCTCACAGTaGCAGTGCAGTGGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PNNFIINRNKTPSWWLQPHSSSQ*QCSGFP
Trigger: CGGGAACCCACTGCACTGCAACTGTGAGCTGCTGTG...GGGCTGCAGCCACCAAGAGGGAGTCTTGTTTCTATTTATAATAAAATTGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp AGTGGCTCCGCCGGGCCCAGGCTCCTCCCAGGCGCCTaGCATACCCGTAGCATCCTCCGGTGTCTCCTAGGT +
Preference number: 6 (lower is better)
Translates to: SGSAGPRLLPGA*HTRSILRCLLG
Trigger: ACCTAGGAGACACCGGAGGATGCTACGGGTATGCCAGGCGCCTGGGAGGAGCCTGGGCCCGGCGGAGCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 90 bp GGGCTCCGTGGTGGGTGGCTCTTGGGCATGGGGCTGGTGCCACCATaGGTCTGGGATTGGACATGGCTGAGTTTGAGTGGGAGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: GLRGGWLLGMGLVPP*VWDWTWLSLSGRRP
Trigger: TGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAGAGCCACCCACCACGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS GCA 72 bp CTCGGGCTGTGGCCTCACCAGCAGGGTTGGTGGCAATaGAGGTATAGGCTCCTGCATCTCCAGCGCCCGTCA +
Preference number: 6 (lower is better)
Translates to: LGLWPHQQGWWQ*RYRLLHLQRPS
Trigger: TGACGGGCGCTGGAGATGCAGGAGCCTATACCTGCATTGCCACCAACCCTGCTGGTGAGGCCACAGCCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp CGGCCAGGCGCAGTTCAACTGTGCGCCTGTCCACGTTaGGTGGCACAAACAGCAGGCCTCGGTGGGCACAAA +
Preference number: 6 (lower is better)
Translates to: RPGAVQLCACPR*VAQTAGLGGHK
Trigger: TTTGTGCCCACCGAGGCCTGCTGTTTGTGCCACCCAACGTGGACAGGCGCACAGTTGAACTGCGCCTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 72 bp TCGGCCAGGCGCAGTTCAACTGTGCGCCTGTCCACGTaGGGTGGCACAAACAGCAGGCCTCGGTGGGCACAA +
Preference number: 6 (lower is better)
Translates to: SARRSSTVRLST*GGTNSRPRWAQ
Trigger: TTGTGCCCACCGAGGCCTGCTGTTTGTGCCACCCAACGTGGACAGGCGCACAGTTGAACTGCGCCTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 90 bp TGGGTGGCTCTTGGGCATGGGGCTGGTGCCACCATTGGTCTGGGATaGGACATGGCTGAGTTTGAGTGGGAGGCGGCCATTCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WVALGHGAGATIGLG*DMAEFEWEAAIPSS
Trigger: GGAGCTGGGAATGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAGAGCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp GGTTATGGTCCAGGTTCAGGGTATGCAGGGCAGGCATaGAGCCTATGCCAGCCCAGGGAACCTGCCGGAGGT +
Preference number: 6 (lower is better)
Translates to: GYGPGSGYAGQA*SLCQPREPAGG
Trigger: ACCTCCGGCAGGTTCCCTGGGCTGGCATAGGCTCCATGCCTGCCCTGCATACCCTGAACCTGGACCATAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 72 bp TTGCGGAAGTCAGGTGGTCCCAGGGCCTGGATGAAGTaGTCGGCCAGGCGCAGTTCAACTGTGCGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: LRKSGGPRAWMK*SARRSSTVRLS
Trigger: GGACAGGCGCACAGTTGAACTGCGCCTGGCCGACAACTTCATCCAGGCCCTGGGACCACCTGACTTCCGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 90 bp CCTGTCATGTTGCGGAAGTCAGGTGGTCCCAGGGCCTGGATGAAGTaGTCGGCCAGGCGCAGTTCAACTGTGCGCCTGTCCACGTTGGGT +
Preference number: 6 (lower is better)
Translates to: PVMLRKSGGPRAWMK*SARRSSTVRLSTLG
Trigger: ACCCAACGTGGACAGGCGCACAGTTGAACTGCGCCTGGCCGACAACTTCATCCAGGCCCTGGGACCACCTGACTTCCGCAACATGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 90 bp GCTCCTGCATCTCCAGCGCCCGTCACCCCAATCTCTAGGGTCCCATaGGGGAAAGCCCAGGCTCGAGAAGAGTTGCCAACCAGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: APASPAPVTPISRVP*GKAQAREELPTSLS
Trigger: TGACAGGCTGGTTGGCAACTCTTCTCGAGCCTGGGCTTTCCCCAATGGGACCCTAGAGATTGGGGTGACGGGCGCTGGAGATGCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS TCA 72 bp TCATGTTGCGGAAGTCAGGTGGTCCCAGGGCCTGGATaGAGTTGTCGGCCAGGCGCAGTTCAACTGTGCGCC +
Preference number: 6 (lower is better)
Translates to: SCCGSQVVPGPG*SCRPGAVQLCA
Trigger: GGCGCACAGTTGAACTGCGCCTGGCCGACAACTTCATCCAGGCCCTGGGACCACCTGACTTCCGCAACATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS GCA 72 bp GAGTTGCCAACCAGCCTGTCATCAGGGCCAACCCAGTaGATGGTAGGTACAGGGTCACCAAGGGCCCTGCAC +
Preference number: 6 (lower is better)
Translates to: ELPTSLSSGPTQ*MVGTGSPRALH
Trigger: GTGCAGGGCCCTTGGTGACCCTGTACCTACCATGCACTGGGTTGGCCCTGATGACAGGCTGGTTGGCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS GCA 72 bp GGGTCCCATTGGGGAAAGCCCAGGCTCGAGAAGAGTTaGCAACCAGCCTGTCATCAGGGCCAACCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: GSHWGKPRLEKS*QPACHQGQPSA
Trigger: TGCACTGGGTTGGCCCTGATGACAGGCTGGTTGGCAACTCTTCTCGAGCCTGGGCTTTCCCCAATGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp CTCCAGCGCCCGTCACCCCAATCTCTAGGGTCCCATTaGGGAAAGCCCAGGCTCGAGAAGAGTTGCCAACCA +
Preference number: 6 (lower is better)
Translates to: LQRPSPQSLGSH*GKPRLEKSCQP
Trigger: TGGTTGGCAACTCTTCTCGAGCCTGGGCTTTCCCCAATGGGACCCTAGAGATTGGGGTGACGGGCGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp TGGCTCTTGGGCATGGGGCTGGTGCCACCATTGGTCTaGGATTGGACATGGCTGAGTTTGAGTGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: WLLGMGLVPPLV*DWTWLSLSGRR
Trigger: CCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 72 bp GAAGTCGTCGAAGGCCCCGGGGGCGATGCGGCCCAGTaGATTGCCACTGAGAATGAGATGCTGGAGGTTGAC +
Preference number: 6 (lower is better)
Translates to: EVVEGPGGDAAQ*IATENEMLEVD
Trigger: GTCAACCTCCAGCATCTCATTCTCAGTGGCAATCAACTGGGCCGCATCGCCCCCGGGGCCTTCGACGACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 72 bp AGGGTCCCATTGGGGAAAGCCCAGGCTCGAGAAGAGTaGCCAACCAGCCTGTCATCAGGGCCAACCCAGTGC +
Preference number: 6 (lower is better)
Translates to: RVPLGKAQAREE*PTSLSSGPTQC
Trigger: GCACTGGGTTGGCCCTGATGACAGGCTGGTTGGCAACTCTTCTCGAGCCTGGGCTTTCCCCAATGGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 72 bp TCTCCAGCGCCCGTCACCCCAATCTCTAGGGTCCCATaGGGGAAAGCCCAGGCTCGAGAAGAGTTGCCAACC +
Preference number: 6 (lower is better)
Translates to: SPAPVTPISRVP*GKAQAREELPT
Trigger: GGTTGGCAACTCTTCTCGAGCCTGGGCTTTCCCCAATGGGACCCTAGAGATTGGGGTGACGGGCGCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 72 bp GGTGGGTGGCTCTTGGGCATGGGGCTGGTGCCACCATaGGTCTGGGATTGGACATGGCTGAGTTTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: GGWLLGMGLVPP*VWDWTWLSLSG
Trigger: CCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAGAGCCACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp ATGGGGCTGGTGCCACCATTGGTCTGGGATTGGACATaGCTGAGTTTGAGTGGGAGGCGGCCATTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: MGLVPPLVWDWT*LSLSGRRPFPA
Trigger: AGCTGGGAATGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp TTGGGCATGGGGCTGGTGCCACCATTGGTCTGGGATTaGACATGGCTGAGTTTGAGTGGGAGGCGGCCATTC +
Preference number: 6 (lower is better)
Translates to: LGMGLVPPLVWD*TWLSLSGRRPF
Trigger: GAATGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 72 bp CTTGGGCATGGGGCTGGTGCCACCATTGGTCTGGGATaGGACATGGCTGAGTTTGAGTGGGAGGCGGCCATT +
Preference number: 6 (lower is better)
Translates to: LGHGAGATIGLG*DMAEFEWEAAI
Trigger: AATGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CAA 90 bp CCAATCTCTAGGGTCCCATTGGGGAAAGCCCAGGCTCGAGAAGAGTaGCCAACCAGCCTGTCATCAGGGCCAACCCAGTGCATGGTAGGT +
Preference number: 6 (lower is better)
Translates to: PISRVPLGKAQAREE*PTSLSSGPTQCMVG
Trigger: ACCTACCATGCACTGGGTTGGCCCTGATGACAGGCTGGTTGGCAACTCTTCTCGAGCCTGGGCTTTCCCCAATGGGACCCTAGAGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS TCA 72 bp TCTCCAGGTCCCCAAAGGAGCGAGCCCCAATGCGGGTaGTGGCATTTCGAGACAATGTTAGGTCCACCAGCC +
Preference number: 6 (lower is better)
Translates to: SPGPQRSEPQCG*WHFETMLGPPA
Trigger: GGCTGGTGGACCTAACATTGTCTCGAAATGCCATCACCCGCATTGGGGCTCGCTCCTTTGGGGACCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp ATGAGGGTCTCATCCTCGCTGCTGTTGTACTGGATTTaGAACATCCACACTGGGTCAGCTGGCCGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: MRVSSSLLLYWI*NIHTGSAGRPR
Trigger: CCTGGGGCGGCCAGCTGACCCAGTGTGGATGTTCCAAATCCAGTACAACAGCAGCGAGGATGAGACCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3
CDS CCA 72 bp GCAAAGACACCTGGGGGTAGTGCATCGATGAGGTTATaGTCCAGGTTCAGGGTATGCAGGGCAGGCATGGAG +
Preference number: 6 (lower is better)
Translates to: AKTPGGSASMRL*SRFRVCRAGME
Trigger: CTCCATGCCTGCCCTGCATACCCTGAACCTGGACCATAACCTCATCGATGCACTACCCCCAGGTGTCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053597.3
ENSMUST00000113822.3