Pregenerated sensors for LRFN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036957Ensembl transcript IDs: ENSMUST00000046351.7
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGCCAGGTCCCGAGGGGTGTCCCTGGGACCAGAGGAACCATAGAGGTGGGCCCTCAGCCGACCCTGGGGTaGTACCCAACGCACTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GQVPRGVPGTRGTIEVGPQPTLG*YPTHSW Trigger: CCACGAGTGCGTTGGGTATCACCCCAGGGTCGGCTG...AGGGCCCACCTCTATGGTTCCTCTGGTCCCAGGGACACCCCTCGGGACCTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGTCCCGAGGGGTGTCCCTGGGACCAGAGGAACCATAGAGGTGGGCCCCAAGGCCCAACGTGTTaGCGTTGCCTAGGCGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: RPGPEGCPWDQRNHRGGPQGPTC*RCLGAL Trigger: TAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTG...GGGCCCACCTCTATGGTTCCTCTGGTCCCAGGGACACCCCTCGGGACCTGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | GGCCAGGTCCCGAGGGGTGTCCCTGGGACCAGAGGAACCATAGAGGTGGGCCCTACTGGATCTGGTACATaGGGATGCCTGGGACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GQVPRGVPGTRGTIEVGPTGSGT*GCLGQA Trigger: GGCCTGTCCCAGGCATCCGCATGTACCAGATCCAGT...AGGGCCCACCTCTATGGTTCCTCTGGTCCCAGGGACACCCCTCGGGACCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGTCCCGAGGGGTGTCCCTGGGACCAGAGGAACCATAGAGGTGGGCCCGTACATGCGGATGCCTaGGACAGGCCGTTGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPGPEGCPWDQRNHRGGPVHADA*DRPLIW Trigger: CCAGATCAACGGCCTGTCCCAGGCATCCGCATGTAC...GGGCCCACCTCTATGGTTCCTCTGGTCCCAGGGACACCCCTCGGGACCTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | GGCCAGGTCCCGAGGGGTGTCCCTGGGACCAGAGGAACCATAGAGGTGGGCCCTGTGGGTCACCACAGGTaGCTCACACACAAACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GQVPRGVPGTRGTIEVGPVGHHR*LTHKLL Trigger: GAGGAGTTTGTGTGTGAGCCACCTGTGGTGACCCAC...AGGGCCCACCTCTATGGTTCCTCTGGTCCCAGGGACACCCCTCGGGACCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR TCA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGGGTCCTGCAGGTTCGTaGCTGGGCCCCCAGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KNREQFGESEARSRGVSLGPAGS*LGPQGS Trigger: TGAGCCCTGGGGGCCCAGTCACGAACCTGCAGGACC...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | TTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCGAGCACGGCTGGAGTTaGCCAGCAGCCGACCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LKTVSNLVSLRPGPEGCPEHGWS*PAADPG Trigger: CCCAGGGTCGGCTGCTGGGCAACTCCAGCCGTGCTC...GGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR TCA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGCACCTCCCAGCGCTATaGTCATGGTGCCGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KNREQFGESEARSRGVSLHLPAL*SWCRPG Trigger: TCCTGGGCGGCACCATGATCATAGCGCTGGGAGGTG...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGAGCACAAGGCCGAAGTaGGGGCTCCGTGGAGAACCG | + |
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Preference number: 4 (lower is better) Translates to: KNREQFGESEARSRGVSLSTRPK*GLRGEP Trigger: CGGTTCTCCACGGAGCCCGCACTTCGGCCTTGTGCT...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGCTCTGGGTCCCCTACTaGCCGGCATCGCAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGLWVPY*PASQGS Trigger: GCTGCCCTGCGATGCCGGGCAGTAGGGGACCCAGAG...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | TTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCGCCGCTGTGGCCCCATaGTCAGTCACTTGGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKTVSNLVSLRPGPEGCPAAVAP*SVTWTP Trigger: TGGCGTCCAAGTGACTGAGCATGGGGCCACAGCGGC...GGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | TTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCAGGGGAGGTGAGCGGTaGGTCACCACAGGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LKTVSNLVSLRPGPEGCPRGGER*VTTGGS Trigger: TGAGCCACCTGTGGTGACCCACCGCTCACCTCCCCT...GGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR TCA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGACTAAGCCGCGCAACTaGCCCTCGCCCAGCGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGTKPRN*PSPSEV Trigger: GACCTCGCTGGGCGAGGGTCAGTTGCGCGGCTTAGT...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGCGCGATGAAGTTGTCTaGCAGGCGCAGTTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KNREQFGESEARSRGVSLRDEVV*QAQFCS Trigger: GCTGCAGAACTGCGCCTGGCAGACAACTTCATCGCG...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGACGCACTCGTGGCTCTaGGTCCCCTACTGCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGTHSWL*VPYCPA Trigger: TGCCGGGCAGTAGGGGACCCAGAGCCACGAGTGCGT...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGGAAGTGCGGGCTCCGTaGAGAACCGAGCGCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGEVRAP*RTERSP Trigger: TGGGCTGCGCTCGGTTCTCCACGGAGCCCGCACTTC...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGAGCGCTCCGTTGGTCTaGGAGCAAACGCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KNREQFGESEARSRGVSLSAPLV*EQTLLT Trigger: TGTCAGCAGCGTTTGCTCCCAGACCAACGGAGCGCT...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGACACCAGCTCACAGTTaGAGTGAAGGGGGTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: KNREQFGESEARSRGVSLTPAHS*SEGGFP Trigger: GGGGAAACCCCCTTCACTGCAACTGTGAGCTGGTGT...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGGCCAGCGGCATTGGCTaGAATGCAAGTGAAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: KNREQFGESEARSRGVSLASGIG*NASESA Trigger: GGCACTTTCACTTGCATTGCAGCCAATGCCGCTGGC...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | CATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGCCGCCCAGGAAGGGTaGGTGCGGTGCAGCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: HQSFKNREQFGESEARSRAAQEG*VRCSTR Trigger: CCTTGTGCTGCACCGCACGCACCCTTCCTGGGCGGC...TCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | CATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAAGTATGGGCCCTGGGTaGAGCAGGCTCAGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HQSFKNREQFGESEARSRSMGPG*SRLRGR Trigger: CCTGCCCCTGAGCCTGCTGCACCCAGGGCCCATACT...TCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | TTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGGTGGTTAGGCGGTTaGAGGTCATGTCCAGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: LKTVSNLVSLRPGPEGCPWWLGG*RSCPVV Trigger: CACGACTGGACATGACCTCCAACCGCCTAACCACCA...GGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTACCCAACGCACTCGTaGCTCTGGGTCCCCTACTGC | + |
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Preference number: 4 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGYPTHS*LWVPYC Trigger: GCAGTAGGGGACCCAGAGCCACGAGTGCGTTGGGTA...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGCCATGCTCAGTCACTTaGACGCCACGGTCGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGPCSVT*TPRSVG Trigger: CCCTACCGACCGTGGCGTCCAAGTGACTGAGCATGG...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | TTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCGAACAAGAGCCGCTGTaGCCCCATGCTCAGTCACTT | + |
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Preference number: 4 (lower is better) Translates to: LKTVSNLVSLRPGPEGCPEQEPL*PHAQSL Trigger: AAGTGACTGAGCATGGGGCCACAGCGGCTCTTGTTC...GGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGGCCGTTAGCCCGGTaGCGCTGTCCTCATAGACTG | + |
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Preference number: 4 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGWPLAR*RCPHRL Trigger: CAGTCTATGAGGACAGCGCCACCGGGCTAACGGCCA...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGCCCGAGCGCTCCGTTaGTCTGGGAGCAAACGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IRVLKTVSNLVSLRPGPEARALR*SGSKRC Trigger: GCAGCGTTTGCTCCCAGACCAACGGAGCGCTCGGGC...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR TCA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGACGCACTGCCGCGATaGAGTTGTCTGCCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: IRVLKTVSNLVSLRPGPEDALPR*SCLPGA Trigger: TGCGCCTGGCAGACAACTTCATCGCGGCAGTGCGTC...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGCCCAGCAGCCGACCCTaGGGTGATACCCAACGCACT | + |
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Preference number: 4 (lower is better) Translates to: IRVLKTVSNLVSLRPGPEPSSRP*GDTQRT Trigger: AGTGCGTTGGGTATCACCCCAGGGTCGGCTGCTGGG...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGCTCAACAGCAGCAGTaGCCTCGCCAGCGGCATTGG | + |
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Preference number: 4 (lower is better) Translates to: IRVLKTVSNLVSLRPGPEAQQQQ*PRQRHW Trigger: CCAATGCCGCTGGCGAGGCCACTGCTGCTGTTGAGC...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | CATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGCAGGCCTGTCATGTTaGCCAGGTCTCGACGACGCA | + |
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Preference number: 4 (lower is better) Translates to: HQSFKNREQFGESEARSRAGLSC*PGLDDA Trigger: TGCGTCGTCGAGACCTGGCCAACATGACAGGCCTGC...TCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGTCATGTCCAGTCGTaGCAACTTGTGCAGGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: IRVLKTVSNLVSLRPGPEGHVQS*QLVQAG Trigger: TCCCGCCTGCACAAGTTGGCACGACTGGACATGACC...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | CATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGTCAGGAGGGATGGTaGTTAGGCGGTTGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: HQSFKNREQFGESEARSRGQEGW*LGGWRS Trigger: TGACCTCCAACCGCCTAACCACCATCCCTCCTGACC...TCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR TCA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGAGCTCACAGTTGCAGTaGAGGGGGTTTCCCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: IRVLKTVSNLVSLRPGPESSQLQ*RGFPPK Trigger: CTTTGGGGGAAACCCCCTTCACTGCAACTGTGAGCT...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | CATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGACTATTACCATCTAGGTaGAGGGCACGCAGGGCACGT | + |
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Preference number: 4 (lower is better) Translates to: HQSFKNREQFGESEARSRLLPSR*RARRAR Trigger: ACGTGCCCTGCGTGCCCTGCACCTAGATGGTAATAG...TCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | CATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGATCTGGTACATGCGGATaGCTGGGACAGGCCGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: HQSFKNREQFGESEARSRSGTCG*LGQAVD Trigger: ATCAACGGCCTGTCCCAGGCATCCGCATGTACCAGA...TCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CCA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGGAAGCCAACAAATTGTaGTCAAGGCCCAACGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGEANKL*SRPNVL Trigger: CAACACGTTGGGCCTTGACCACAATTTGTTGGCTTC...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR TCA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGAAGCAGCACGAAGATaGAGACCAGAACAGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: IRVLKTVSNLVSLRPGPEEAARR*RPEQKR Trigger: TCGCTTCTGTTCTGGTCTTCATCTTCGTGCTGCTTC...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR GCA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGCTAGACAAGCTCAGATaGAGCAGGCCTGTCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: IRVLKTVSNLVSLRPGPELDKLR*SRPVML Trigger: CAACATGACAGGCCTGCTGCATCTGAGCTTGTCTAG...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS CCA 90 bp | GGAAGGGTGCGTGCGGTGCAGCACAAGGCCGAAGTGCGGGCTCCGTaGAGAACCGAGCGCAGCCCACTGGCCGCGTGGCCGTTAGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: GRVRAVQHKAEVRAP*RTERSPLAAWPLAR Trigger: CCGGGCTAACGGCCACGCGGCCAGTGGGCTGCGCTCGGTTCTCCACGGAGCCCGCACTTCGGCCTTGTGCTGCACCGCACGCACCCTTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS GCA 90 bp | CCCCCAGGGCTCACAGTCCAATTGGACCACAGTATGGGCCCTGGGTaGAGCAGGCTCAGGGGCAGGCGCACTGGGCACGGGCCCGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PPGLTVQLDHSMGPG*SRLRGRRTGHGPER Trigger: GCGCTCGGGCCCGTGCCCAGTGCGCCTGCCCCTGAGCCTGCTGCACCCAGGGCCCATACTGTGGTCCAATTGGACTGTGAGCCCTGGGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS GCA 90 bp | GGGCCCGAGCGCTCCGTTGGTCTGGGAGCAAACGCTGCTGACAGGTaGCGTAGCCTTGGCCTTGCCGGGCGGCTGGCCTCCGTGCACCTT | + |
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Preference number: 5 (lower is better) Translates to: GPERSVGLGANAADR*RSLGLAGRLASVHL Trigger: AAGGTGCACGGAGGCCAGCCGCCCGGCAAGGCCAAGGCTACGGCACCTGTCAGCAGCGTTTGCTCCCAGACCAACGGAGCGCTCGGGCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS CCA 90 bp | TCAGGGGCAGGCGCACTGGGCACGGGCCCGAGCGCTCCGTTGGTCTaGGAGCAAACGCTGCTGACAGGTGCCGTAGCCTTGGCCTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: SGAGALGTGPSAPLV*EQTLLTGAVALALP Trigger: CGGCAAGGCCAAGGCTACGGCACCTGTCAGCAGCGTTTGCTCCCAGACCAACGGAGCGCTCGGGCCCGTGCCCAGTGCGCCTGCCCCTGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS CCA 90 bp | GAAGTGCGGGCTCCGTGGAGAACCGAGCGCAGCCCACTGGCCGCGTaGCCGTTAGCCCGGTGGCGCTGTCCTCATAGACTGCGAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: EVRAPWRTERSPLAA*PLARWRCPHRLRAH Trigger: GTGTGCTCGCAGTCTATGAGGACAGCGCCACCGGGCTAACGGCCACGCGGCCAGTGGGCTGCGCTCGGTTCTCCACGGAGCCCGCACTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS GCA 90 bp | TCCCAGCGCTATGATCATGGTGCCGCCCAGGAAGGGTGCGTGCGGTaGAGCACAAGGCCGAAGTGCGGGCTCCGTGGAGAACCGAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: SQRYDHGAAQEGCVR*STRPKCGLRGEPSA Trigger: TGCGCTCGGTTCTCCACGGAGCCCGCACTTCGGCCTTGTGCTGCACCGCACGCACCCTTCCTGGGCGGCACCATGATCATAGCGCTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CAA 90 bp | AGGCCAGGTCCCGAGGGGTGTCCCTGGGACCAGAGGAACCATAGAGGTGGGCCCTCAAGGCCCAACGTGTaGACGTTGCCTAGGCGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RPGPEGCPWDQRNHRGGPSRPNV*TLPRRP Trigger: AGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGA...GGGCCCACCTCTATGGTTCCTCTGGTCCCAGGGACACCCCTCGGGACCTGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS-3UTR CAA 90 bp | GGCCAGGTCCCGAGGGGTGTCCCTGGGACCAGAGGAACCATAGAGGTGGGCCCTTCGTCGGCCGAGCTGTaGTACTGGATCTGGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: GQVPRGVPGTRGTIEVGPSSAEL*YWIWYM Trigger: CATGTACCAGATCCAGTACAACAGCTCGGCCGACGA...AGGGCCCACCTCTATGGTTCCTCTGGTCCCAGGGACACCCCTCGGGACCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 90 bp | GTCTCGGCACAGTCGTCTAGGGCACCAGCTGCCAGGGCTGCTAGCTaGTTGTTGCTCAGGATGAGGTGGCGCAAGTTGACTAAGCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VSAQSSRAPAARAAS*LLLRMRWRKLTKPR Trigger: GCGCGGCTTAGTCAACTTGCGCCACCTCATCCTGAGCAACAACCAGCTAGCAGCCCTGGCAGCTGGTGCCCTAGACGACTGTGCCGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 90 bp | TGGAGAACCGAGCGCAGCCCACTGGCCGCGTGGCCGTTAGCCCGGTaGCGCTGTCCTCATAGACTGCGAGCACACATAGATCATAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WRTERSPLAAWPLAR*RCPHRLRAHIDHRY Trigger: GTACCTATGATCTATGTGTGCTCGCAGTCTATGAGGACAGCGCCACCGGGCTAACGGCCACGCGGCCAGTGGGCTGCGCTCGGTTCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGGGCCCGAGCGCTCCGTaGGTCTGGGAGCAAACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNREQFGESEARSRGVSLGPSAP*VWEQTL Trigger: CAGCGTTTGCTCCCAGACCAACGGAGCGCTCGGGCC...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS GCA 90 bp | CACGGTCAGCTCAACAGCAGCAGTGGCCTCGCCAGCGGCATTGGCTaGAATGCAAGTGAAAGTGCCGCCATCTTCCGGCTCAGTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HGQLNSSSGLASGIG*NASESAAIFRLSDQ Trigger: CTGGTCACTGAGCCGGAAGATGGCGGCACTTTCACTTGCATTGCAGCCAATGCCGCTGGCGAGGCCACTGCTGCTGTTGAGCTGACCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGTCCCGAGGGGTGTCCCTGGGACCAGAGGAACCATAGAGGTGGGCCCTACTGAAGCCAACAAATaGTGGTCAAGGCCCAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQVPRGVPGTRGTIEVGPTEANK*WSRPNV Trigger: CACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGT...AGGGCCCACCTCTATGGTTCCTCTGGTCCCAGGGACACCCCTCGGGACCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGAGCAGGCCTGTCATGTaGGCCAGGTCTCGACGACGC | + |
|
Preference number: 5 (lower is better) Translates to: KNREQFGESEARSRGVSLSRPVM*ARSRRR Trigger: GCGTCGTCGAGACCTGGCCAACATGACAGGCCTGCT...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 90 bp | TGCAGGCGGGAAAAGGCTCCAGCGGGCACTGAAGCCAACAAATTGTaGTCAAGGCCCAACGTGTTGACGTTGCCTAGGCGCCCTAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRREKAPAGTEANKL*SRPNVLTLPRRPKA Trigger: GGCTTTAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCCCGCTGGAGCCTTTTCCCGCCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | AAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCTGCCCAACGTGTTGACGTaGCCTAGGCGCCCTAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KNREQFGESEARSRGVSLPNVLT*PRRPKA Trigger: GGCTTTAGGGCGCCTAGGCAACGTCAACACGTTGGG...CAGGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS TCA 90 bp | CAGCGGGCACTGAAGCCAACAAATTGTGGTCAAGGCCCAACGTGTTaGCGTTGCCTAGGCGCCCTAAAGCCTCCCAGGGAAGCTGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QRALKPTNCGQGPTC*RCLGALKPPREAAQ Trigger: TTGAGCAGCTTCCCTGGGAGGCTTTAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCCCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS TCA 90 bp | CAGTCGTGCCAACTTGTGCAGGCGGGAAAAGGCTCCAGCGGGCACTaGAGCCAACAAATTGTGGTCAAGGCCCAACGTGTTGACGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSCQLVQAGKGSSGH*SQQIVVKAQRVDVA Trigger: GGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCCCGCTGGAGCCTTTTCCCGCCTGCACAAGTTGGCACGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS TCA 90 bp | TTGTTGCTCAGGATGAGGTGGCGCAAGTTGACTAAGCCGCGCAACTaGCCCTCGCCCAGCGAGGTCAGTCTATTACCATCTAGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLRMRWRKLTKPRN*PSPSEVSLLPSRCR Trigger: CCTGCACCTAGATGGTAATAGACTGACCTCGCTGGGCGAGGGTCAGTTGCGCGGCTTAGTCAACTTGCGCCACCTCATCCTGAGCAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | TTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCAGGGCTGCTAGCTGGTaGTTGCTCAGGATGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKTVSNLVSLRPGPEGCPRAASW*LLRMRW Trigger: CCACCTCATCCTGAGCAACAACCAGCTAGCAGCCCT...GGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | TTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTGTCCCGCCTCGCCAGCGGCATaGGCTGCAATGCAAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKTVSNLVSLRPGPEGCPASPAA*AAMQVK Trigger: TTTCACTTGCATTGCAGCCAATGCCGCTGGCGAGGC...GGGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGGCTGCTAGCTGGTTGTaGCTCAGGATGAGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGAASWL*LRMRWR Trigger: GCGCCACCTCATCCTGAGCAACAACCAGCTAGCAGC...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGTCCAGTCGTGCCAACTaGTGCAGGCGGGAAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGSSRAN*CRREKA Trigger: AGCCTTTTCCCGCCTGCACAAGTTGGCACGACTGGA...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGCCCATGCTCAGTCACTaGGACGCCACGGTCGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: IRVLKTVSNLVSLRPGPEPMLSH*DATVGR Trigger: CCTACCGACCGTGGCGTCCAAGTGACTGAGCATGGG...CTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS-3UTR CAA 90 bp | AGAGTTTTAAAAACCGTGAGCAATTTGGTGAGTCTGAGGCCAGGTCCCGAGGGGATGGTGGTTAGGCGGTaGGAGGTCATGTCCAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RVLKTVSNLVSLRPGPEGMVVRR*EVMSSR Trigger: ACGACTGGACATGACCTCCAACCGCCTAACCACCAT...CCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTTTAAAACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | CGTGCGGTGCAGCACAAGGCCGAAGTGCGGGCTCCGTaGAGAACCGAGCGCAGCCCACTGGCCGCGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RAVQHKAEVRAP*RTERSPLAAWP Trigger: CGGCCACGCGGCCAGTGGGCTGCGCTCGGTTCTCCACGGAGCCCGCACTTCGGCCTTGTGCTGCACCGCACG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 90 bp | GCAGGCTCAGGGGCAGGCGCACTGGGCACGGGCCCGAGCGCTCCGTaGGTCTGGGAGCAAACGCTGCTGACAGGTGCCGTAGCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGSGAGALGTGPSAP*VWEQTLLTGAVALA Trigger: GGCCAAGGCTACGGCACCTGTCAGCAGCGTTTGCTCCCAGACCAACGGAGCGCTCGGGCCCGTGCCCAGTGCGCCTGCCCCTGAGCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | ACGCCACGGTCGGTAGGGGCCACAGTGTCCGCCACTTaGGCGGAGGCTGAAGCCGCAGAGGGCGGGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPRSVGATVSAT*AEAEAAEGGVR Trigger: CCTCACCCCGCCCTCTGCGGCTTCAGCCTCCGCCAAAGTGGCGGACACTGTGGCCCCTACCGACCGTGGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | GGGGCAGGCGCACTGGGCACGGGCCCGAGCGCTCCGTaGGTCTGGGAGCAAACGCTGCTGACAGGTGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: GAGALGTGPSAP*VWEQTLLTGAV Trigger: TACGGCACCTGTCAGCAGCGTTTGCTCCCAGACCAACGGAGCGCTCGGGCCCGTGCCCAGTGCGCCTGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 90 bp | GTCACTTGGACGCCACGGTCGGTAGGGGCCACAGTGTCCGCCACTTaGGCGGAGGCTGAAGCCGCAGAGGGCGGGGTGAGGGCATCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VTWTPRSVGATVSAT*AEAEAAEGGVRASG Trigger: ACCCGATGCCCTCACCCCGCCCTCTGCGGCTTCAGCCTCCGCCAAAGTGGCGGACACTGTGGCCCCTACCGACCGTGGCGTCCAAGTGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | GCTCCGTGGAGAACCGAGCGCAGCCCACTGGCCGCGTaGCCGTTAGCCCGGTGGCGCTGTCCTCATAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: APWRTERSPLAA*PLARWRCPHRL Trigger: CAGTCTATGAGGACAGCGCCACCGGGCTAACGGCCACGCGGCCAGTGGGCTGCGCTCGGTTCTCCACGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | GGCGCACTGGGCACGGGCCCGAGCGCTCCGTTGGTCTaGGAGCAAACGCTGCTGACAGGTGCCGTAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GALGTGPSAPLV*EQTLLTGAVAL Trigger: CAAGGCTACGGCACCTGTCAGCAGCGTTTGCTCCCAGACCAACGGAGCGCTCGGGCCCGTGCCCAGTGCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS TCA 72 bp | GGCAGCTGGCCGACCTGCGGGCACTGCCAGGGGAGGTaGGCGGTGGGTCACCACAGGTGGCTCACACACAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSWPTCGHCQGR*AVGHHRWLTHK Trigger: TTTGTGTGTGAGCCACCTGTGGTGACCCACCGCTCACCTCCCCTGGCAGTGCCCGCAGGTCGGCCAGCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | GGGGTTTCCCCCAAAGGCCAGCACCAGAGCAGAGGCTaGCGAGCCTCGAGGCCGGGCAAGCAGTGGCAAACG | + |
|
Preference number: 6 (lower is better) Translates to: GVSPKGQHQSRG*RASRPGKQWQT Trigger: CGTTTGCCACTGCTTGCCCGGCCTCGAGGCTCGCCAGCCTCTGCTCTGGTGCTGGCCTTTGGGGGAAACCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | GGCCGACCTGCGGGCACTGCCAGGGGAGGTGAGCGGTaGGTCACCACAGGTGGCTCACACACAAACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRPAGTARGGER*VTTGGSHTNSS Trigger: GGAGGAGTTTGTGTGTGAGCCACCTGTGGTGACCCACCGCTCACCTCCCCTGGCAGTGCCCGCAGGTCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | GTCTGGGAGCAAACGCTGCTGACAGGTGCCGTAGCCTaGGCCTTGCCGGGCGGCTGGCCTCCGTGCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VWEQTLLTGAVA*ALPGGWPPCTL Trigger: CAAGGTGCACGGAGGCCAGCCGCCCGGCAAGGCCAAGGCTACGGCACCTGTCAGCAGCGTTTGCTCCCAGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | GAGCGCAGCCCACTGGCCGCGTGGCCGTTAGCCCGGTaGCGCTGTCCTCATAGACTGCGAGCACACATAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ERSPLAAWPLAR*RCPHRLRAHID Trigger: ATCTATGTGTGCTCGCAGTCTATGAGGACAGCGCCACCGGGCTAACGGCCACGCGGCCAGTGGGCTGCGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | TTGGCCAGGTCTCGACGACGCACTGCCGCGATGAAGTaGTCTGCCAGGCGCAGTTCTGCAGCGCGGCGATCC | + |
|
Preference number: 6 (lower is better) Translates to: LARSRRRTAAMK*SARRSSAARRS Trigger: GGATCGCCGCGCTGCAGAACTGCGCCTGGCAGACAACTTCATCGCGGCAGTGCGTCGTCGAGACCTGGCCAA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS TCA 72 bp | TCATGTTGGCCAGGTCTCGACGACGCACTGCCGCGATaGAGTTGTCTGCCAGGCGCAGTTCTGCAGCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCWPGLDDALPR*SCLPGAVLQRG Trigger: GCCGCGCTGCAGAACTGCGCCTGGCAGACAACTTCATCGCGGCAGTGCGTCGTCGAGACCTGGCCAACATGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS GCA 72 bp | TATGATCATGGTGCCGCCCAGGAAGGGTGCGTGCGGTaGAGCACAAGGCCGAAGTGCGGGCTCCGTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: YDHGAAQEGCVR*STRPKCGLRGE Trigger: TTCTCCACGGAGCCCGCACTTCGGCCTTGTGCTGCACCGCACGCACCCTTCCTGGGCGGCACCATGATCATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | CAGGCCGTTGATCTGGCCACTGAACAAGAGCCGCTGTaGCCCCATGCTCAGTCACTTGGACGCCACGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: QAVDLATEQEPL*PHAQSLGRHGR Trigger: CCGACCGTGGCGTCCAAGTGACTGAGCATGGGGCCACAGCGGCTCTTGTTCAGTGGCCAGATCAACGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | AGGTTCGTGACTGGGCCCCCAGGGCTCACAGTCCAATaGGACCACAGTATGGGCCCTGGGTGCAGCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RFVTGPPGLTVQ*DHSMGPGCSRL Trigger: GAGCCTGCTGCACCCAGGGCCCATACTGTGGTCCAATTGGACTGTGAGCCCTGGGGGCCCAGTCACGAACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 90 bp | GGACCCACGGTCAGCTCAACAGCAGCAGTGGCCTCGCCAGCGGCATaGGCTGCAATGCAAGTGAAAGTGCCGCCATCTTCCGGCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GPTVSSTAAVASPAA*AAMQVKVPPSSGSV Trigger: CACTGAGCCGGAAGATGGCGGCACTTTCACTTGCATTGCAGCCAATGCCGCTGGCGAGGCCACTGCTGCTGTTGAGCTGACCGTGGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 90 bp | TCGGCACAGTCGTCTAGGGCACCAGCTGCCAGGGCTGCTAGCTGGTaGTTGCTCAGGATGAGGTGGCGCAAGTTGACTAAGCCGCGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SAQSSRAPAARAASW*LLRMRWRKLTKPRN Trigger: GTTGCGCGGCTTAGTCAACTTGCGCCACCTCATCCTGAGCAACAACCAGCTAGCAGCCCTGGCAGCTGGTGCCCTAGACGACTGTGCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS GCA 72 bp | CTCAACAGCAGCAGTGGCCTCGCCAGCGGCATTGGCTaGAATGCAAGTGAAAGTGCCGCCATCTTCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LNSSSGLASGIG*NASESAAIFRL Trigger: GAGCCGGAAGATGGCGGCACTTTCACTTGCATTGCAGCCAATGCCGCTGGCGAGGCCACTGCTGCTGTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | CGCCAGATCGGTCAGCAGGAAGGAGCGACTGTCCGCTaGGATCATCCTGTAGACAAGGATGTCGTCGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RQIGQQEGATVR*DHPVDKDVVGR Trigger: TCGGCCGACGACATCCTTGTCTACAGGATGATCCCAGCGGACAGTCGCTCCTTCCTGCTGACCGATCTGGCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | CAGTCGTCTAGGGCACCAGCTGCCAGGGCTGCTAGCTaGTTGTTGCTCAGGATGAGGTGGCGCAAGTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: QSSRAPAARAAS*LLLRMRWRKLT Trigger: AGTCAACTTGCGCCACCTCATCCTGAGCAACAACCAGCTAGCAGCCCTGGCAGCTGGTGCCCTAGACGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | GTCAGCTCAACAGCAGCAGTGGCCTCGCCAGCGGCATaGGCTGCAATGCAAGTGAAAGTGCCGCCATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSSTAAVASPAA*AAMQVKVPPSS Trigger: GGAAGATGGCGGCACTTTCACTTGCATTGCAGCCAATGCCGCTGGCGAGGCCACTGCTGCTGTTGAGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 90 bp | CCAGCGGGCACTGAAGCCAACAAATTGTGGTCAAGGCCCAACGTGTaGACGTTGCCTAGGCGCCCTAAAGCCTCCCAGGGAAGCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAGTEANKLWSRPNV*TLPRRPKASQGSCS Trigger: TGAGCAGCTTCCCTGGGAGGCTTTAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCCCGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | TCGTCTAGGGCACCAGCTGCCAGGGCTGCTAGCTGGTaGTTGCTCAGGATGAGGTGGCGCAAGTTGACTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRAPAARAASW*LLRMRWRKLTK Trigger: CTTAGTCAACTTGCGCCACCTCATCCTGAGCAACAACCAGCTAGCAGCCCTGGCAGCTGGTGCCCTAGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | GCCAACAAATTGTGGTCAAGGCCCAACGTGTTGACGTaGCCTAGGCGCCCTAAAGCCTCCCAGGGAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ANKLWSRPNVLT*PRRPKASQGSC Trigger: GCAGCTTCCCTGGGAGGCTTTAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 90 bp | TTGTGCAGGCGGGAAAAGGCTCCAGCGGGCACTGAAGCCAACAAATaGTGGTCAAGGCCCAACGTGTTGACGTTGCCTAGGCGCCCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LCRREKAPAGTEANK*WSRPNVLTLPRRPK Trigger: TTTAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCCCGCTGGAGCCTTTTCCCGCCTGCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS TCA 72 bp | AGGATGAGGTGGCGCAAGTTGACTAAGCCGCGCAACTaGCCCTCGCCCAGCGAGGTCAGTCTATTACCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RMRWRKLTKPRN*PSPSEVSLLPS Trigger: AGATGGTAATAGACTGACCTCGCTGGGCGAGGGTCAGTTGCGCGGCTTAGTCAACTTGCGCCACCTCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CCA 72 bp | GAAAAGGCTCCAGCGGGCACTGAAGCCAACAAATTGTaGTCAAGGCCCAACGTGTTGACGTTGCCTAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: EKAPAGTEANKL*SRPNVLTLPRR Trigger: GCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCCCGCTGGAGCCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 72 bp | CGGGAAAAGGCTCCAGCGGGCACTGAAGCCAACAAATaGTGGTCAAGGCCCAACGTGTTGACGTTGCCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: REKAPAGTEANK*WSRPNVLTLPR Trigger: CCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCCCGCTGGAGCCTTTTCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
||
| CDS CAA 90 bp | GGCACTGAAGCCAACAAATTGTGGTCAAGGCCCAACGTGTTGACGTaGCCTAGGCGCCCTAAAGCCTCCCAGGGAAGCTGCTCAAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: GTEANKLWSRPNVLT*PRRPKASQGSCSRL Trigger: TAACCTTGAGCAGCTTCCCTGGGAGGCTTTAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS TCA 72 bp | CTGAAGCCAACAAATTGTGGTCAAGGCCCAACGTGTTaGCGTTGCCTAGGCGCCCTAAAGCCTCCCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LKPTNCGQGPTC*RCLGALKPPRE Trigger: TTCCCTGGGAGGCTTTAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS TCA 72 bp | CAACTTGTGCAGGCGGGAAAAGGCTCCAGCGGGCACTaGAGCCAACAAATTGTGGTCAAGGCCCAACGTGTT | + |
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Preference number: 6 (lower is better) Translates to: QLVQAGKGSSGH*SQQIVVKAQRV Trigger: AACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGTGCCCGCTGGAGCCTTTTCCCGCCTGCACAAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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| CDS CAA 72 bp | ACTGAAGCCAACAAATTGTGGTCAAGGCCCAACGTGTaGACGTTGCCTAGGCGCCCTAAAGCCTCCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: TEANKLWSRPNV*TLPRRPKASQG Trigger: TCCCTGGGAGGCTTTAGGGCGCCTAGGCAACGTCAACACGTTGGGCCTTGACCACAATTTGTTGGCTTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046351.7 |
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