Pregenerated sensors for LRFN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040490Ensembl transcript IDs: ENSMUST00000046254.3
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCACAGGCCTGGGAAGGTaGCATGGGGAAGGGGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: KHSGLSLTHERVPFPEHTTGLGR*HGEGGV Trigger: TACACCCCCTTCCCCATGTCACCTTCCCAGGCCTGT...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAATAGAAAGGCAGTTGTTGGCCTCTCCAAACACTCAGGGCTCAGTCTGACACCTGGGAAGGTGACATaGGGAAGGGGGTGTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VNRKAVVGLSKHSGLSLTPGKVT*GRGCSW Trigger: CCAGCTACACCCCCTTCCCCATGTCACCTTCCCAGG...TGTCAGACTGAGCCCTGAGTGTTTGGAGAGGCCAACAACTGCCTTTCTATTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| 3UTR TCA 72 bp | CAGTTGTTGGCCTCTCCAAACACTCAGGGCTCAGTCTaGCACATGAGCGAGTCCCATTCCCTGAGCACACCC | + |
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Preference number: 3 (lower is better) Translates to: QLLASPNTQGSV*HMSESHSLSTP Trigger: GGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTTGGAGAGGCCAACAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGGACAGGCCTGGGAAGGGTTAGCAAGGAAGCCTaGGAGCGGGCAAAGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: ESHSLSTPRWVVGTGLGRVSKEA*ERAKMG Trigger: CCCCATCTTTGCCCGCTCCCAGGCTTCCTTGCTAAC...CCTTCCCAGGCCTGTCCCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGGACAGGCCTGGGAAGGTATCCCACCCAGAGGTaGAGGCTGAGACCCATTGGT | + |
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Preference number: 4 (lower is better) Translates to: ESHSLSTPRWVVGTGLGRYPTQR*RLRPIG Trigger: ACCAATGGGTCTCAGCCTCCACCTCTGGGTGGGATA...CCTTCCCAGGCCTGTCCCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | AGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGGGCTTCGTTTGGCCTTaGCCTCCAGGGGCAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLTHERVPFPEHTPLGGGGFVWP*PPGAKG Trigger: TCCCTTTGCCCCTGGAGGGCAAGGCCAAACGAAGCC...CCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GCTGGGCAGAAGGACATGAGGCTGTTGACAGGGAGACAAGACTGTCCCTGGATGCTTGGGACGAGGAGCTaGGGGTGGGAGCCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AGQKDMRLLTGRQDCPWMLGTRS*GWEPPG Trigger: CCCTGGAGGCTCCCACCCCCAGCTCCTCGTCCCAAG...CATCCAGGGACAGTCTTGTCTCCCTGTCAACAGCCTCATGTCCTTCTGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | AGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGTCAAGCGGTCAAGGCTaGGCTTGGGACGAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLTHERVPFPEHTPLGGGSSGQG*AWDEEL Trigger: CAGCTCCTCGTCCCAAGCCCAGCCTTGACCGCTTGA...CCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | TCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGGAGGGTACTCCTTCCCTGCGGTTGCTGTCAAGGTaGAGGGAGCGGAGGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SDSFLSHFEGGREGTPSLRLLSR*RERRLS Trigger: TGAGAGCCTCCGCTCCCTGCACCTTGACAGCAACCG...CAGGGAAGGAGTACCCTCCCTCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | AGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGAAGAGTGGCTTCGTTTaGCCTTGCCCTCCAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLTHERVPFPEHTPLGGGKSGFV*PCPPGA Trigger: TGCCCCTGGAGGGCAAGGCCAAACGAAGCCACTCTT...CCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | GCTGGGCAGAAGGACATGAGGCTGTTGACAGGGAGACAAGACTGTCCCTGGATGGCAGCCGATTGGATGTaGGGTCCAGGCGGGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: AGQKDMRLLTGRQDCPWMAADWM*GPGGPV Trigger: AACTGGCCCGCCTGGACCTCACATCCAATCGGCTGC...CATCCAGGGACAGTCTTGTCTCCCTGTCAACAGCCTCATGTCCTTCTGCCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | CTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGGACAGAGAAGCTCACAATTaGAGTGCAGCGGGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LTHERVPFPEHTPLGGGDREAHN*SAAGSL Trigger: GAGGGAACCCGCTGCACTGCAATTGTGAGCTTCTCT...GTCCCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | TCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGGAGGGTACTCCTTCCCTGGCACTTAAGAGTGGCTaGCTGGCCCTCCAGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: SDSFLSHFEGGREGTPSLALKSG*LALQNQ Trigger: CTGGTTCTGGAGGGCCAGGCAGCCACTCTTAAGTGC...CAGGGAAGGAGTACCCTCCCTCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | AGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGGGCTGCCATTTTTCCTaGGGTGTCGTGGTTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SLTHERVPFPEHTPLGGGGCHFS*GVVVAD Trigger: GTCTGCAACCACGACACCCCAGGAAAAATGGCAGCC...CCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | TCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGGAGGGTACTCCTTCCCTGGGCTCTCGGTCTGAGTaGTGGCCTCTGGATGATGTC | + |
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Preference number: 4 (lower is better) Translates to: SDSFLSHFEGGREGTPSLGSRSE*WPLDDV Trigger: GACATCATCCAGAGGCCACCACTCAGACCGAGAGCC...CAGGGAAGGAGTACCCTCCCTCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | TCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGGAGGGTACTCCTTCCCTGCACAACTTTGGGTGGTaGCTGAGGAAGCTGGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: SDSFLSHFEGGREGTPSLHNFGW*LRKLAN Trigger: GTTGGCCAGCTTCCTCAGGCACCACCCAAAGTTGTG...CAGGGAAGGAGTACCCTCCCTCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | AAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGTCAAGGCTGGGCTTaGGACGAGGAGCTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KYLPVLTPTPSSPTLRVGGQGWA*DEELGV Trigger: CACCCCCAGCTCCTCGTCCCAAGCCCAGCCTTGACC...TCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGGAGGGTCCCATGTCAAAAGAGTaGCTTCGTTTGGCCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ASADSDSFLSHFEGGREGPMSKE*LRLALP Trigger: GGGCAAGGCCAAACGAAGCCACTCTTTTGACATGGG...ACCCTCCCTCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | AAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGACCCAGAGGTGGAGGCTaGGACCCATTGGTCTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KYLPVLTPTPSSPTLRVGPRGGG*DPLVCE Trigger: CTCGCAGACCAATGGGTCTCAGCCTCCACCTCTGGG...TCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | GCTGGGCAGAAGGACATGAGGCTGTTGACAGGGAGACAAGACTGTCCCTGGATGGCAAGAGCATGCCATTaGCAGACAGGCTGCGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: AGQKDMRLLTGRQDCPWMARACH*QTGCAS Trigger: CGAAGCGCAGCCTGTCTGTCAATGGCATGCTCTTGC...CATCCAGGGACAGTCTTGTCTCCCTGTCAACAGCCTCATGTCCTTCTGCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | GCTGGGCAGAAGGACATGAGGCTGTTGACAGGGAGACAAGACTGTCCCTGGATGAGGCGGGCCAGTTTCTaGAGGTCTGCAAAAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: AGQKDMRLLTGRQDCPWMRRASF*RSAKVP Trigger: GGGCACTTTTGCAGACCTGCAGAAACTGGCCCGCCT...CATCCAGGGACAGTCTTGTCTCCCTGTCAACAGCCTCATGTCCTTCTGCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | AGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGCTAAGGTGTGGGAGCTaGACAATGGAGACCTCTACA | + |
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Preference number: 4 (lower is better) Translates to: SLTHERVPFPEHTPLGGGLRCGS*TMETST Trigger: TGTAGAGGTCTCCATTGTGCAGCTCCCACACCTTAG...CCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | GCTGGGCAGAAGGACATGAGGCTGTTGACAGGGAGACAAGACTGTCCCTGGATGTTACCCACTCTGAGCTaGCAAATGTCCCCCGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: AGQKDMRLLTGRQDCPWMLPTLS*QMSPGL Trigger: GAGCCCGGGGGACATTTGGCAGCTCAGAGTGGGTAA...CATCCAGGGACAGTCTTGTCTCCCTGTCAACAGCCTCATGTCCTTCTGCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | GCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGGAGGGTAAGGGTCCACTGTCCTaGGAGGTGGTAATTAGAATG | + |
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Preference number: 4 (lower is better) Translates to: ASADSDSFLSHFEGGREGKGPLS*EVVIRM Trigger: CATTCTAATTACCACCTCTCAGGACAGTGGACCCTT...ACCCTCCCTCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCAGTGGATCAAAGGGCTaGGGTCCCCAATGGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KHSGLSLTHERVPFPEHTSGSKG*GPQWPC Trigger: GCAAGGCCATTGGGGACCCCAGCCCTTTGATCCACT...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | CTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCACGAGGAGCTGGGGGTaGGAGCCTCCAGGGACCCCG | + |
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Preference number: 4 (lower is better) Translates to: LDVNITMETPQILASADSTRSWG*EPPGTP Trigger: CGGGGTCCCTGGAGGCTCCCACCCCCAGCTCCTCGT...GGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCAGGGCTGGATATGGCTaGTGGTGTTCCTGGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: KHSGLSLTHERVPFPEHTRAGYG*WCSWTR Trigger: CCTTGTCCAGGAACACCATCAGCCATATCCAGCCCT...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | ATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACGGTAGTCGGCCTTGGTaGAGAACTGGGCACAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: METPQILASADSDSFLSHGSRPW*RTGHSP Trigger: TGGGCTGTGCCCAGTTCTTCACCAAGGCCGACTACC...GTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | AAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGACCACAGCAAACGCCATaGCAAAAGCCAGCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KYLPVLTPTPSSPTLRVGPQQTP*QKPAAH Trigger: GTGGGCTGCTGGCTTTTGGCATGGCGTTTGCTGTGG...TCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | GCTGGGCAGAAGGACATGAGGCTGTTGACAGGGAGACAAGACTGTCCCTGGATGGCAGGTCTGCAAAAGTaGCCTCAGCAATGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AGQKDMRLLTGRQDCPWMAGLQK*PQQCGP Trigger: TGGACCACATTGCTGAGGGCACTTTTGCAGACCTGC...CATCCAGGGACAGTCTTGTCTCCCTGTCAACAGCCTCATGTCCTTCTGCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | CTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGGACTTAGAATGTCCAGGGTaGCATTGTCATATACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LTHERVPFPEHTPLGGGDLECPG*HCHIQQ Trigger: CTGCTGTATATGACAATGGCACCCTGGACATTCTAA...GTCCCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GCTGGGCAGAAGGACATGAGGCTGTTGACAGGGAGACAAGACTGTCCCTGGATGGAGAAGGGCTGGATATaGCTGATGGTGTTCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: AGQKDMRLLTGRQDCPWMEKGWI*LMVFLD Trigger: GTCCAGGAACACCATCAGCCATATCCAGCCCTTCTC...CATCCAGGGACAGTCTTGTCTCCCTGTCAACAGCCTCATGTCCTTCTGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GTGAATAGAAAGGCAGTTGTTGGCCTCTCCAAACACTCAGGGCTCAGTCTGACATCGGGGGCAACCCAGTaGATCAAAGGGCTGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VNRKAVVGLSKHSGLSLTSGATQ*IKGLGS Trigger: GGACCCCAGCCCTTTGATCCACTGGGTTGCCCCCGA...TGTCAGACTGAGCCCTGAGTGTTTGGAGAGGCCAACAACTGCCTTTCTATTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCTTTCCTGGGGTGTCGTaGTTGCAGACCTTGTACCGC | + |
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Preference number: 4 (lower is better) Translates to: KHSGLSLTHERVPFPEHTFPGVS*LQTLYR Trigger: GCGGTACAAGGTCTGCAACCACGACACCCCAGGAAA...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GCTGGGCAGAAGGACATGAGGCTGTTGACAGGGAGACAAGACTGTCCCTGGATGGAGGCTGAGACCCATTaGTCTGCGAGTACACATTGC | + |
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Preference number: 4 (lower is better) Translates to: AGQKDMRLLTGRQDCPWMEAETH*SASTHC Trigger: GCAATGTGTACTCGCAGACCAATGGGTCTCAGCCTC...CATCCAGGGACAGTCTTGTCTCCCTGTCAACAGCCTCATGTCCTTCTGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | CTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCAAGGGAGAAGACTCCTaGCACGGGTGGCCGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LDVNITMETPQILASADSKGEDS*HGWPGA Trigger: GGCCCCCGGCCACCCGTGCCAGGAGTCTTCTCCCTT...GGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | AAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGTGCCCTCAGCAATGTaGTCCAGCAGATTGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KYLPVLTPTPSSPTLRVGVPSAM*SSRLWS Trigger: GGACCACAATCTGCTGGACCACATTGCTGAGGGCAC...TCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | ATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTAAGAGTGGCTGCCTaGCCCTCCAGAACCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: METPQILASADSDSFLSHLRVAA*PSRTSS Trigger: GCTGCTGGTTCTGGAGGGCCAGGCAGCCACTCTTAA...GTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | ATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTGGTCCAGACTCAGCTaGTGGAGGTTGACCATGCGC | + |
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Preference number: 4 (lower is better) Translates to: ITMETPQILASADSDSFLWSRLS*WRLTMR Trigger: GCGCATGGTCAACCTCCATCAGCTGAGTCTGGACCA...GAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCTGGCCAGGCTGGTACTaGAGTCCATCAACTCATTTC | + |
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Preference number: 4 (lower is better) Translates to: KHSGLSLTHERVPFPEHTWPGWY*SPSTHF Trigger: GAAATGAGTTGATGGACTTCAGTACCAGCCTGGCCA...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCAGGCATCATCAGCGATaGCACCCAGCTGGTTATTGT | + |
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Preference number: 4 (lower is better) Translates to: KHSGLSLTHERVPFPEHTRHHQR*HPAGYC Trigger: ACAATAACCAGCTGGGTGGCATCGCTGATGATGCCT...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | ATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTCCGGGGGAAGTTTCTaGAGCCGATTGGATGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: METPQILASADSDSFLSHSGGSF*SRLDVR Trigger: CCTCACATCCAATCGGCTGCAGAAACTTCCCCCGGA...GTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | AACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCAAAGAGGAGCCCCTTaGAGGGACACAGGGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: NITMETPQILASADSDSFQRGAP*RDTGSP Trigger: TGGGGACCCTGTGTCCCTCCAAGGGGCTCCTCTTTG...GAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCAGTTCTTCTTTCCTTTaGCTCTTGAGGTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: KHSGLSLTHERVPFPEHTSSSFL*LLRSRE Trigger: CTCCCTGGACCTCAAGAGTCAAAGGAAAGAAGAACT...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCAGTTTCTGCAGGTCTaGAAAAGTGCCCTCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: KHSGLSLTHERVPFPEHTQFLQV*KSALSN Trigger: ATTGCTGAGGGCACTTTTGCAGACCTGCAGAAACTG...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | ATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACAGCTGCAGCTGCAGCTaGAAAGTCCCCCATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: METPQILASADSDSFLSHSCSCS*KVPHVK Trigger: TTTGACATGGGGGACTTTGCAGCTGCAGCTGCAGCT...GTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | CTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGGGAGCGGGCAAAGATaGGGTCCGGGGGAAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDVNITMETPQILASADSGSGQR*GPGEVS Trigger: AGAAACTTCCCCCGGACCCCATCTTTGCCCGCTCCC...GGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | AACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCAAAAGTAGCGACCCTTaGGACTTCCGGGGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NITMETPQILASADSDSFKSSDP*DFRGIH Trigger: GTGGATCCCCCGGAAGTCTCAAGGGTCGCTACTTTT...GAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | AACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTTCACCCTGGGTGCTaGCTTGCTGACAGACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NITMETPQILASADSDSFLHPGC*LADRPL Trigger: AAGTGGTCTGTCAGCAAGTCAGCACCCAGGGTGAAG...GAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | CTGTCCCTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTCAATGTTGGTGGCTGTaGGCGTCGTGGCTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLDVNITMETPQILASAQCWWL*ASWLCR Trigger: ACGACACAGCCACGACGCTCACAGCCACCAACATTG...AGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAGGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | AACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCGCGAGTACACATTGCTaGCAGTGGCGGCTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NITMETPQILASADSDSFASTHC*QWRLPF Trigger: AAATGGCAGCCGCCACTGTCAGCAATGTGTACTCGC...GAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | ATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCCTTTCCTTTGACTCTTaGGGTCCAGGGAGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITMETPQILASADSDSFLLSFDS*GPGRQR Trigger: CCTTTGCCTCCCTGGACCTCAAGAGTCAAAGGAAAG...GAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | ATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACAGCTCACAATTGCAGTaGAGCGGGTTCCCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: METPQILASADSDSFLSHSSQLQ*SGFPPK Trigger: TTTTGGAGGGAACCCGCTGCACTGCAATTGTGAGCT...GTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
||
| CDS-3UTR CCA 90 bp | GTGAATAGAAAGGCAGTTGTTGGCCTCTCCAAACACTCAGGGCTCAGTCTGACAGACTCAGACAGATTCTaGCAGACGCAGTACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VNRKAVVGLSKHSGLSLTDSDRF*QTQYLG Trigger: CCCCAAGTACTGCGTCTGCCAGAATCTGTCTGAGTC...TGTCAGACTGAGCCCTGAGTGTTTGGAGAGGCCAACAACTGCCTTTCTATTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | ATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCTTGGCGGCCAATGTaGATGATGAAGTTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: ITMETPQILASADSDSFLSWRPM*MMKLPP Trigger: GGGTGGCAACTTCATCATCCACATTGGCCGCCAAGA...GAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | ATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACGGCCTTGTTAGAGGCTaGGATCATCCTGTAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: METPQILASADSDSFLSHGLVRG*DHPVDQ Trigger: CTGATCTACAGGATGATCCCAGCCTCTAACAAGGCC...GTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | CTGTCCCTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTCGCTGCCCAGTGAGCTaGAAGAAGAGGAGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLDVNITMETPQILASARCPVS*KKRSHR Trigger: CCTGTGACTCCTCTTCTTCCAGCTCACTGGGCAGCG...AGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAGGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR GCA 90 bp | AACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCTTCACAATAAGGTGTTaGAGGTTGACCAGACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NITMETPQILASADSDSFFTIRC*RLTRPR Trigger: CCGGGGTCTGGTCAACCTGCAACACCTTATTGTGAA...GAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GTGAATAGAAAGGCAGTTGTTGGCCTCTCCAAACACTCAGGGCTCAGTCTGACAATGTTGGCAAAGTCTTaGCGGCCAATGTGGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: VNRKAVVGLSKHSGLSLTMLAKS*RPMWMM Trigger: CATCATCCACATTGGCCGCCAAGACTTTGCCAACAT...TGTCAGACTGAGCCCTGAGTGTTTGGAGAGGCCAACAACTGCCTTTCTATTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | GTGAATAGAAAGGCAGTTGTTGGCCTCTCCAAACACTCAGGGCTCAGTCTGACAGCGATGCCACCCAGCTaGTTATTGTTCACAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNRKAVVGLSKHSGLSLTAMPPS*LLFTIR Trigger: CCTTATTGTGAACAATAACCAGCTGGGTGGCATCGC...TGTCAGACTGAGCCCTGAGTGTTTGGAGAGGCCAACAACTGCCTTTCTATTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | ATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCCATATACAGCAGTCCTaGAAGAGTTTCCCACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITMETPQILASADSDSFLHIQQS*KSFPPS Trigger: GCTTGGTGGGAAACTCTTCCAGGACTGCTGTATATG...GAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR TCA 90 bp | CTGTCCCTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTCAGTTGTACTGCAGCTaGTACATCTTCACCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLDVNITMETPQILASAQLYCS*YIFTLG Trigger: ACCCAGGGTGAAGATGTATCAGCTGCAGTACAACTG...AGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAGGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | CTGTCCCTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTCATAGACTGGCATTGTaGGTAGTCGGCCTTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLDVNITMETPQILASAHRLAL*VVGLGE Trigger: TTCACCAAGGCCGACTACCCACAATGCCAGTCTATG...AGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAGGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CCA 90 bp | CTGTCCCTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTTGCCTGCTGGAGTCCTaGAGTCTAGAAGTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLDVNITMETPQILASACLLES*SLEVLL Trigger: AAGAAGAACTTCTAGACTCCAGGACTCCAGCAGGCA...AGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAGGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
||
| CDS GCA 90 bp | CGGAGTGTGTCCTCCCCAAGGCTAGGTAGCCGGTTGCTGTCAAGGTaGAGGGAGCGGAGGCTCTCAAGGTCCAGGAAGGAGAAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSVSSPRLGSRLLSR*RERRLSRSRKEKGW Trigger: CCAGCCCTTCTCCTTCCTGGACCTTGAGAGCCTCCGCTCCCTGCACCTTGACAGCAACCGGCTACCTAGCCTTGGGGAGGACACACTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | GAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGGACAGGCCTGGGAAGGGTGCATAGACTGGCATaGTGGGTAGTCGGCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESHSLSTPRWVVGTGLGRVHRLA*WVVGLG Trigger: ACCAAGGCCGACTACCCACAATGCCAGTCTATGCAC...CCTTCCCAGGCCTGTCCCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | AGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGCCTGGGGTGTCGTGGTaGCAGACCTTGTACCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SLTHERVPFPEHTPLGGGPGVSW*QTLYRT Trigger: GGTGCGGTACAAGGTCTGCAACCACGACACCCCAGG...CCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 90 bp | AAGGAAGCCTGGGAGCGGGCAAAGATGGGGTCCGGGGGAAGTTTCTaGAGCCGATTGGATGTGAGGTCCAGGCGGGCCAGTTTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEAWERAKMGSGGSF*SRLDVRSRRASFCR Trigger: CCTGCAGAAACTGGCCCGCCTGGACCTCACATCCAATCGGCTGCAGAAACTTCCCCCGGACCCCATCTTTGCCCGCTCCCAGGCTTCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | CTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGGACATGTGGATGATGAAGTaGCCACCCAGACGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTHERVPFPEHTPLGGGDMWMMK*PPRRSS Trigger: GGAGCTGCGTCTGGGTGGCAACTTCATCATCCACAT...GTCCCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | GCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGGAGGGTGTTCCGGACACCAGGTaGTTGACCACGAAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASADSDSFLSHFEGGREGVPDTR*LTTKAL Trigger: CAAGGCCTTCGTGGTCAACAACCTGGTGTCCGGAAC...ACCCTCCCTCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | TCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGAGGGAGGGTACTCCTTCCCTGAAAGAGTGGCTTCGTTaGGCCTTGCCCTCCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SDSFLSHFEGGREGTPSLKEWLR*ALPSRG Trigger: GCCCCTGGAGGGCAAGGCCAAACGAAGCCACTCTTT...CAGGGAAGGAGTACCCTCCCTCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | AGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCCCGCTGGGTGGTGGGTTGCTGACAGACCACTaGACCAGGGCAGATGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLTHERVPFPEHTPLGGGLLTDH*TRADVV Trigger: CACCACATCTGCCCTGGTCAAGTGGTCTGTCAGCAA...CCCACCACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 90 bp | CAAGAGCATGCCATTGACAGACAGGCTGCGCTTCGTCCAGATGTTTaGGACCCGCCTAGGGGGACTGTAGCCACCAGGAACAGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QEHAIDRQAALRPDV*DPPRGTVATRNSCS Trigger: GCTGCAGCTGTTCCTGGTGGCTACAGTCCCCCTAGGCGGGTCTCAAACATCTGGACGAAGCGCAGCCTGTCTGTCAATGGCATGCTCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 90 bp | GATCAAAGGGCTGGGGTCCCCAATGGCCTTGCACTTAAGAGTGGCTaGCTGGCCCTCCAGAACCAGCAGCTTGTGTGTGTGCTGGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DQRAGVPNGLALKSG*LALQNQQLVCVLGD Trigger: ATCACCCAGCACACACACAAGCTGCTGGTTCTGGAGGGCCAGGCAGCCACTCTTAAGTGCAAGGCCATTGGGGACCCCAGCCCTTTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 90 bp | AGGTGCAGGGAGCGGAGGCTCTCAAGGTCCAGGAAGGAGAAGGGCTaGATATGGCTGATGGTGTTCCTGGACAAGGTCAGATCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCRERRLSRSRKEKG*IWLMVFLDKVRSTS Trigger: GCTGGTGGATCTGACCTTGTCCAGGAACACCATCAGCCATATCCAGCCCTTCTCCTTCCTGGACCTTGAGAGCCTCCGCTCCCTGCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 90 bp | CCAGAGGTGGAGGCTGAGACCCATTGGTCTGCGAGTACACATTGCTaGCAGTGGCGGCTGCCATTTTTCCTGGGGTGTCGTGGTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PEVEAETHWSASTHC*QWRLPFFLGCRGCR Trigger: TCTGCAACCACGACACCCCAGGAAAAATGGCAGCCGCCACTGTCAGCAATGTGTACTCGCAGACCAATGGGTCTCAGCCTCCACCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 90 bp | GAGCTGCACAATGGAGACCTCTACAGTGGCCGTAGCCTCTCCTGCTaGATTGGCTGCGATGCAGGTAAAGGGTCCACTGTCCTGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ELHNGDLYSGRSLSC*IGCDAGKGSTVLRG Trigger: ACCTCTCAGGACAGTGGACCCTTTACCTGCATCGCAGCCAATGCAGCAGGAGAGGCTACGGCCACTGTAGAGGTCTCCATTGTGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 90 bp | TGGGAGCTGCACAATGGAGACCTCTACAGTGGCCGTAGCCTCTCCTaGTGCATTGGCTGCGATGCAGGTAAAGGGTCCACTGTCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WELHNGDLYSGRSLS*CIGCDAGKGSTVLR Trigger: TCTCAGGACAGTGGACCCTTTACCTGCATCGCAGCCAATGCAGCAGGAGAGGCTACGGCCACTGTAGAGGTCTCCATTGTGCAGCTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCAGGCTAGGTAGCCGGTaGCTGTCAAGGTGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KHSGLSLTHERVPFPEHTRLGSR*LSRCRE Trigger: CTCCCTGCACCTTGACAGCAACCGGCTACCTAGCCT...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 90 bp | AGCGGAGGCTCTCAAGGTCCAGGAAGGAGAAGGGCTGGATATGGCTaGTGGTGTTCCTGGACAAGGTCAGATCCACCAGCCCTGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SGGSQGPGRRRAGYG*WCSWTRSDPPALSC Trigger: ACATGACAGGGCTGGTGGATCTGACCTTGTCCAGGAACACCATCAGCCATATCCAGCCCTTCTCCTTCCTGGACCTTGAGAGCCTCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 90 bp | CAATGTGGTCCAGCAGATTGTGGTCCAGACTCAGCTGATGGAGGTTaGCCATGCGCCGTACGGAATCCCAGGGAAGTCCGTGGAGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QCGPADCGPDSADGG*PCAVRNPREVRGGC Trigger: ACAACCTCCACGGACTTCCCTGGGATTCCGTACGGCGCATGGTCAACCTCCATCAGCTGAGTCTGGACCACAATCTGCTGGACCACATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 90 bp | CTGAGACCCATTGGTCTGCGAGTACACATTGCTGACAGTGGCGGCTaGCATTTTTCCTGGGGTGTCGTGGTTGCAGACCTTGTACCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRPIGLRVHIADSGG*HFSWGVVVADLVPH Trigger: GTGCGGTACAAGGTCTGCAACCACGACACCCCAGGAAAAATGGCAGCCGCCACTGTCAGCAATGTGTACTCGCAGACCAATGGGTCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | ATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACCCTCCCCGGCTGGTCTaGCTGGAACCTGTGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: METPQILASADSDSFLSHPPRLV*LEPVMS Trigger: GGACATCACAGGTTCCAGCAAGACCAGCCGGGGAGG...GTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 90 bp | GGTCTGCGAGTACACATTGCTGACAGTGGCGGCTGCCATTTTTCCTaGGGTGTCGTGGTTGCAGACCTTGTACCGCACCATGAGGATTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLRVHIADSGGCHFS*GVVVADLVPHHEDY Trigger: GTAATCCTCATGGTGCGGTACAAGGTCTGCAACCACGACACCCCAGGAAAAATGGCAGCCGCCACTGTCAGCAATGTGTACTCGCAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | ATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACGGGTCCCCAATGGCCTaGCACTTAAGAGTGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: METPQILASADSDSFLSHGSPMA*HLRVAA Trigger: GGCAGCCACTCTTAAGTGCAAGGCCATTGGGGACCC...GTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
||
| CDS GCA 90 bp | TCATCAGCGATGCCACCCAGCTGGTTATTGTTCACAATAAGGTGTTaGAGGTTGACCAGACCCCGGAGTGTGTCCTCCCCAAGGCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSAMPPSWLLFTIRC*RLTRPRSVSSPRLG Trigger: ACCTAGCCTTGGGGAGGACACACTCCGGGGTCTGGTCAACCTGCAACACCTTATTGTGAACAATAACCAGCTGGGTGGCATCGCTGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
||
| CDS-3UTR CAA 90 bp | AAATACTTGCCAGTGCTGACTCCGACTCCTTCCTCTCCCACTTTGAGGGTGGGACCGGACACCAGGTTGTaGACCACGAAGGCCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KYLPVLTPTPSSPTLRVGPDTRL*TTKALL Trigger: TAACAAGGCCTTCGTGGTCAACAACCTGGTGTCCGG...TCCCACCCTCAAAGTGGGAGAGGAAGGAGTCGGAGTCAGCACTGGCAAGTATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
||
| CDS-3UTR CAA 90 bp | GTGAATAGAAAGGCAGTTGTTGGCCTCTCCAAACACTCAGGGCTCAGTCTGACAGTCTGCGAGTACACATaGCTGACAGTGGCGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VNRKAVVGLSKHSGLSLTVCEYT*LTVAAA Trigger: GGCAGCCGCCACTGTCAGCAATGTGTACTCGCAGAC...TGTCAGACTGAGCCCTGAGTGTTTGGAGAGGCCAACAACTGCCTTTCTATTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
||
| CDS-3UTR CAA 90 bp | AAACACTCAGGGCTCAGTCTGACACATGAGCGAGTCCCATTCCCTGAGCACACCATGTCCAGGGTGCCATaGTCATATACAGCAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KHSGLSLTHERVPFPEHTMSRVP*SYTAVL Trigger: CAGGACTGCTGTATATGACAATGGCACCCTGGACAT...GGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGAGCCCTGAGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
||
| CDS-3UTR CAA 90 bp | CTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCTGGCTTCGTTTGGCCTaGCCCTCCAGGGGCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LDVNITMETPQILASADSWLRLA*PSRGKG Trigger: CCCTTTGCCCCTGGAGGGCAAGGCCAAACGAAGCCA...GGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
||
| CDS TCA 90 bp | ATCAGAACAGTTGTACTGCAGCTGATACATCTTCACCCTGGGTGCTaGCTTGCTGACAGACCACTTGACCAGGGCAGATGTGGTGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: IRTVVLQLIHLHPGC*LADRPLDQGRCGGN Trigger: GTTACCACCACATCTGCCCTGGTCAAGTGGTCTGTCAGCAAGTCAGCACCCAGGGTGAAGATGTATCAGCTGCAGTACAACTGTTCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 90 bp | GTCAGCAAGAAGTCTTCAAAGGCATCATCAGCGATGCCACCCAGCTaGTTATTGTTCACAATAAGGTGTTGCAGGTTGACCAGACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSKKSSKASSAMPPS*LLFTIRCCRLTRPR Trigger: CCGGGGTCTGGTCAACCTGCAACACCTTATTGTGAACAATAACCAGCTGGGTGGCATCGCTGATGATGCCTTTGAAGACTTCTTGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 90 bp | CGTTCCGGACACCAGGTTGTTGACCACGAAGGCCTTGTTAGAGGCTaGGATCATCCTGTAGATCAGCACCTCATCATCAGAACAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSGHQVVDHEGLVRG*DHPVDQHLIIRTVV Trigger: TACAACTGTTCTGATGATGAGGTGCTGATCTACAGGATGATCCCAGCCTCTAACAAGGCCTTCGTGGTCAACAACCTGGTGTCCGGAACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | CTGTCCCTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTAGTTTCTGCAGCCGATaGGATGTGAGGTCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLDVNITMETPQILASASFCSR*DVRSRR Trigger: CCGCCTGGACCTCACATCCAATCGGCTGCAGAAACT...AGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAGGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | CTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGCCTCTCCTGCTGCATaGGCTGCGATGCAGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDVNITMETPQILASADSASPAA*AAMQVK Trigger: CTTTACCTGCATCGCAGCCAATGCAGCAGGAGAGGC...GGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | CTGTCCCTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGGCAAGAGCATGCCATaGACAGACAGGCTGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLDVNITMETPQILASAGKSMP*TDRLRF Trigger: GAAGCGCAGCCTGTCTGTCAATGGCATGCTCTTGCC...AGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAGGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | AACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCGTTCACAATAAGGTGTaGCAGGTTGACCAGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NITMETPQILASADSDSFVHNKV*QVDQTP Trigger: CGGGGTCTGGTCAACCTGCAACACCTTATTGTGAAC...GAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | AACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCTTGACCACGAAGGCCTaGTTAGAGGCTGGGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: NITMETPQILASADSDSFLTTKA*LEAGII Trigger: GATGATCCCAGCCTCTAACAAGGCCTTCGTGGTCAA...GAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | AACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCGACTCCTTCCATGTTGGCAAAGTCTaGGCGGCCAATGTGGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: NITMETPQILASADSDSFHVGKV*AANVDD Trigger: ATCATCCACATTGGCCGCCAAGACTTTGCCAACATG...GAAGGAGTCGGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | CTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCTCGTGGTTGCAGACCTaGTACCGCACCATGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LDVNITMETPQILASADSSWLQT*YRTMRI Trigger: AATCCTCATGGTGCGGTACAAGGTCTGCAACCACGA...GGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS-3UTR CAA 90 bp | CTGGATGTAAACATCACCATGGAAACTCCACAAATACTTGCCAGTGCTGACTCCCCACCCAGCTGGTTATaGTTCACAATAAGGTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LDVNITMETPQILASADSPPSWL*FTIRCC Trigger: GCAACACCTTATTGTGAACAATAACCAGCTGGGTGG...GGAGTCAGCACTGGCAAGTATTTGTGGAGTTTCCATGGTGATGTTTACATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 90 bp | TTGACCAGACCCCGGAGTGTGTCCTCCCCAAGGCTAGGTAGCCGGTaGCTGTCAAGGTGCAGGGAGCGGAGGCTCTCAAGGTCCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LTRPRSVSSPRLGSR*LSRCRERRLSRSRK Trigger: CTTCCTGGACCTTGAGAGCCTCCGCTCCCTGCACCTTGACAGCAACCGGCTACCTAGCCTTGGGGAGGACACACTCCGGGGTCTGGTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 72 bp | TCCTCCCCAAGGCTAGGTAGCCGGTTGCTGTCAAGGTaGAGGGAGCGGAGGCTCTCAAGGTCCAGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSPRLGSRLLSR*RERRLSRSRKE Trigger: CTCCTTCCTGGACCTTGAGAGCCTCCGCTCCCTGCACCTTGACAGCAACCGGCTACCTAGCCTTGGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 72 bp | GCTGGGGTCCCCAATGGCCTTGCACTTAAGAGTGGCTaGCTGGCCCTCCAGAACCAGCAGCTTGTGTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AGVPNGLALKSG*LALQNQQLVCV Trigger: CACACACACAAGCTGCTGGTTCTGGAGGGCCAGGCAGCCACTCTTAAGTGCAAGGCCATTGGGGACCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 72 bp | ACCCAGTGGATCAAAGGGCTGGGGTCCCCAATGGCCTaGCACTTAAGAGTGGCTGCCTGGCCCTCCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: TQWIKGLGSPMA*HLRVAAWPSRT Trigger: GGTTCTGGAGGGCCAGGCAGCCACTCTTAAGTGCAAGGCCATTGGGGACCCCAGCCCTTTGATCCACTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 72 bp | TCGGCCTTGGTGAAGAACTGGGCACAGCCCACAATGTaGGTGGCTGTGAGCGTCGTGGCTGTGTCGTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SALVKNWAQPTM*VAVSVVAVSSH Trigger: GTGGGACGACACAGCCACGACGCTCACAGCCACCAACATTGTGGGCTGTGCCCAGTTCTTCACCAAGGCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | GCCATTGACAGACAGGCTGCGCTTCGTCCAGATGTTTaGGACCCGCCTAGGGGGACTGTAGCCACCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AIDRQAALRPDV*DPPRGTVATRN Trigger: GTTCCTGGTGGCTACAGTCCCCCTAGGCGGGTCTCAAACATCTGGACGAAGCGCAGCCTGTCTGTCAATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 72 bp | GAGGGACACAGGGTCCCCAGTGACTCAGACAGATTCTaGCAGACGCAGTACTTGGGGCAGGCATCGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: EGHRVPSDSDRF*QTQYLGQASTT Trigger: TGTGGTCGATGCCTGCCCCAAGTACTGCGTCTGCCAGAATCTGTCTGAGTCACTGGGGACCCTGTGTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 72 bp | TGGCAGTTAGCAAGGAAGCCTGGGAGCGGGCAAAGATaGGGTCCGGGGGAAGTTTCTGCAGCCGATTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: WQLARKPGSGQR*GPGEVSAADWM Trigger: CATCCAATCGGCTGCAGAAACTTCCCCCGGACCCCATCTTTGCCCGCTCCCAGGCTTCCTTGCTAACTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 90 bp | GCCTTGCACTTAAGAGTGGCTGCCTGGCCCTCCAGAACCAGCAGCTaGTGTGTGTGCTGGGTGATGAGAGGCGGCTCACACACAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALHLRVAAWPSRTSS*CVCWVMRGGSHTNS Trigger: GGAGTTTGTGTGTGAGCCGCCTCTCATCACCCAGCACACACACAAGCTGCTGGTTCTGGAGGGCCAGGCAGCCACTCTTAAGTGCAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | CCAGCAGATTGTGGTCCAGACTCAGCTGATGGAGGTTaGCCATGCGCCGTACGGAATCCCAGGGAAGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PADCGPDSADGG*PCAVRNPREVR Trigger: ACGGACTTCCCTGGGATTCCGTACGGCGCATGGTCAACCTCCATCAGCTGAGTCTGGACCACAATCTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | AGCTGGCCAACGGGTATCCCACCCAGAGGTGGAGGCTaGGACCCATTGGTCTGCGAGTACACATTGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SWPTGIPPRGGG*DPLVCEYTLLT Trigger: TGTCAGCAATGTGTACTCGCAGACCAATGGGTCTCAGCCTCCACCTCTGGGTGGGATACCCGTTGGCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | GCAATGTGGTCCAGCAGATTGTGGTCCAGACTCAGCTaGTGGAGGTTGACCATGCGCCGTACGGAATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AMWSSRLWSRLS*WRLTMRRTESQ Trigger: CTGGGATTCCGTACGGCGCATGGTCAACCTCCATCAGCTGAGTCTGGACCACAATCTGCTGGACCACATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | GAGGCTGAGACCCATTGGTCTGCGAGTACACATTGCTaGCAGTGGCGGCTGCCATTTTTCCTGGGGTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: EAETHWSASTHC*QWRLPFFLGCR Trigger: ACGACACCCCAGGAAAAATGGCAGCCGCCACTGTCAGCAATGTGTACTCGCAGACCAATGGGTCTCAGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 72 bp | AATGGAGACCTCTACAGTGGCCGTAGCCTCTCCTGCTaGATTGGCTGCGATGCAGGTAAAGGGTCCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: NGDLYSGRSLSC*IGCDAGKGSTV Trigger: GACAGTGGACCCTTTACCTGCATCGCAGCCAATGCAGCAGGAGAGGCTACGGCCACTGTAGAGGTCTCCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 72 bp | GCCATCCGGCTAGTGCTGTTACTAAGGTGTGGGAGCTaGACAATGGAGACCTCTACAGTGGCCGTAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AIRLVLLLRCGS*TMETSTVAVAS Trigger: AGAGGCTACGGCCACTGTAGAGGTCTCCATTGTGCAGCTCCCACACCTTAGTAACAGCACTAGCCGGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 72 bp | GTCCATCAACTCATTTCGCACCACAACTTTGGGTGGTaGCTGAGGAAGCTGGCCAACGGGTATCCCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VHQLISHHNFGW*LRKLANGYPTQ Trigger: CTGGGTGGGATACCCGTTGGCCAGCTTCCTCAGGCACCACCCAAAGTTGTGGTGCGAAATGAGTTGATGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 72 bp | AGGCTCTCAAGGTCCAGGAAGGAGAAGGGCTGGATATaGCTGATGGTGTTCCTGGACAAGGTCAGATCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RLSRSRKEKGWI*LMVFLDKVRST Trigger: GGTGGATCTGACCTTGTCCAGGAACACCATCAGCCATATCCAGCCCTTCTCCTTCCTGGACCTTGAGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 72 bp | GTACACATTGCTGACAGTGGCGGCTGCCATTTTTCCTaGGGTGTCGTGGTTGCAGACCTTGTACCGCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: VHIADSGGCHFS*GVVVADLVPHH Trigger: ATGGTGCGGTACAAGGTCTGCAACCACGACACCCCAGGAAAAATGGCAGCCGCCACTGTCAGCAATGTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | CCAGGTCACTCTCCTCAAAGGGCAAGAGCATGCCATTaGCAGACAGGCTGCGCTTCGTCCAGATGTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGHSPQRARACH*QTGCASSRCLR Trigger: TCTCAAACATCTGGACGAAGCGCAGCCTGTCTGTCAATGGCATGCTCTTGCCCTTTGAGGAGAGTGACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 72 bp | ATGCCACCCAGCTGGTTATTGTTCACAATAAGGTGTTaGAGGTTGACCAGACCCCGGAGTGTGTCCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MPPSWLLFTIRC*RLTRPRSVSSP Trigger: TGGGGAGGACACACTCCGGGGTCTGGTCAACCTGCAACACCTTATTGTGAACAATAACCAGCTGGGTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS GCA 72 bp | ATTGGTCTGCGAGTACACATTGCTGACAGTGGCGGCTaGCATTTTTCCTGGGGTGTCGTGGTTGCAGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: IGLRVHIADSGG*HFSWGVVVADL Trigger: AAGGTCTGCAACCACGACACCCCAGGAAAAATGGCAGCCGCCACTGTCAGCAATGTGTACTCGCAGACCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 72 bp | GAATGTCCAGGGTGCCATTGTCATATACAGCAGTCCTaGAAGAGTTTCCCACCAAGCGGTCATCGGGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ECPGCHCHIQQS*KSFPPSGHRGQ Trigger: TTGCCCCCGATGACCGCTTGGTGGGAAACTCTTCCAGGACTGCTGTATATGACAATGGCACCCTGGACATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 72 bp | CCCAGCTGGTTATTGTTCACAATAAGGTGTTGCAGGTaGACCAGACCCCGGAGTGTGTCCTCCCCAAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PSWLLFTIRCCR*TRPRSVSSPRL Trigger: TAGCCTTGGGGAGGACACACTCCGGGGTCTGGTCAACCTGCAACACCTTATTGTGAACAATAACCAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 72 bp | ATCTTCACCCTGGGTGCTGACTTGCTGACAGACCACTaGACCAGGGCAGATGTGGTGGTAACATCGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: IFTLGADLLTDH*TRADVVVTSDT Trigger: TGTGTCCGATGTTACCACCACATCTGCCCTGGTCAAGTGGTCTGTCAGCAAGTCAGCACCCAGGGTGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 72 bp | ACAGTGGCGGCTGCCATTTTTCCTGGGGTGTCGTGGTaGCAGACCTTGTACCGCACCATGAGGATTACAATG | + |
|
Preference number: 6 (lower is better) Translates to: TVAAAIFPGVSW*QTLYRTMRITM Trigger: CATTGTAATCCTCATGGTGCGGTACAAGGTCTGCAACCACGACACCCCAGGAAAAATGGCAGCCGCCACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 90 bp | ACATTGCTGACAGTGGCGGCTGCCATTTTTCCTGGGGTGTCGTGGTaGCAGACCTTGTACCGCACCATGAGGATTACAATGAAGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLLTVAAAIFPGVSW*QTLYRTMRITMKTS Trigger: GCTGGTCTTCATTGTAATCCTCATGGTGCGGTACAAGGTCTGCAACCACGACACCCCAGGAAAAATGGCAGCCGCCACTGTCAGCAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | GCATTGGCTGCGATGCAGGTAAAGGGTCCACTGTCCTaGGAGGTGGTAATTAGAATGTCCAGGGTGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: ALAAMQVKGPLS*EVVIRMSRVPL Trigger: CAATGGCACCCTGGACATTCTAATTACCACCTCTCAGGACAGTGGACCCTTTACCTGCATCGCAGCCAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | GTTGTACTGCAGCTGATACATCTTCACCCTGGGTGCTaGCTTGCTGACAGACCACTTGACCAGGGCAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: VVLQLIHLHPGC*LADRPLDQGRC Trigger: ACATCTGCCCTGGTCAAGTGGTCTGTCAGCAAGTCAGCACCCAGGGTGAAGATGTATCAGCTGCAGTACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 72 bp | TTCCTGGACAAGGTCAGATCCACCAGCCCTGTCATGTaGGCAAAGTCTTGGCGGCCAATGTGGATGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FLDKVRSTSPVM*AKSWRPMWMMK Trigger: CTTCATCATCCACATTGGCCGCCAAGACTTTGCCAACATGACAGGGCTGGTGGATCTGACCTTGTCCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CAA 72 bp | GCTGCCATTTTTCCTGGGGTGTCGTGGTTGCAGACCTaGTACCGCACCATGAGGATTACAATGAAGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAIFPGVSWLQT*YRTMRITMKTS Trigger: GCTGGTCTTCATTGTAATCCTCATGGTGCGGTACAAGGTCTGCAACCACGACACCCCAGGAAAAATGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS TCA 72 bp | ATCAGCACCTCATCATCAGAACAGTTGTACTGCAGCTaGTACATCTTCACCCTGGGTGCTGACTTGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: ISTSSSEQLYCS*YIFTLGADLLT Trigger: TGTCAGCAAGTCAGCACCCAGGGTGAAGATGTATCAGCTGCAGTACAACTGTTCTGATGATGAGGTGCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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| CDS CCA 72 bp | AAGTCTTCAAAGGCATCATCAGCGATGCCACCCAGCTaGTTATTGTTCACAATAAGGTGTTGCAGGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: KSSKASSAMPPS*LLFTIRCCRLT Trigger: GGTCAACCTGCAACACCTTATTGTGAACAATAACCAGCTGGGTGGCATCGCTGATGATGCCTTTGAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046254.3 |
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